AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1039930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1039930 MtrunA17_Chr7g0271711 94.189 912 50 2 1 911 1 910 0.0 1758
Msa1039930 MtrunA17_Chr1g0192581 46.224 874 335 26 52 911 5 757 0.0 591
Msa1039930 MtrunA17_Chr2g0294831 32.918 963 544 28 2 909 6 921 2.16e-116 377
Msa1039930 MtrunA17_Chr7g0250831 25.408 429 262 14 491 909 555 935 8.38e-20 95.5
Msa1039930 MtrunA17_Chr6g0457761 25.051 491 265 19 449 909 461 878 1.05e-17 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1039930 AT5G26910.4 31.264 918 527 21 1 909 4 826 1.55e-107 352
Msa1039930 AT5G26910.1 31.264 918 527 21 1 909 4 826 1.55e-107 352
Msa1039930 AT5G26910.3 31.264 918 526 21 1 909 4 825 2.43e-106 349
Msa1039930 AT3G58650.1 31.838 936 482 39 1 909 4 810 1.58e-90 305
Msa1039930 AT5G26910.2 33.165 594 335 12 1 586 4 543 1.31e-64 229
Msa1039930 AT3G05750.1 34.057 599 324 20 1 585 7 548 1.68e-52 197
Msa1039930 AT3G05750.1 36.970 165 94 2 747 910 644 799 2.74e-24 110
Msa1039930 AT3G05750.4 34.220 564 303 19 33 585 34 540 1.88e-49 188
Msa1039930 AT3G05750.4 36.970 165 94 2 747 910 636 791 3.65e-24 109
Msa1039930 AT3G05750.3 33.466 502 270 18 91 585 1 445 3.03e-43 168
Msa1039930 AT3G05750.3 36.970 165 94 2 747 910 541 696 2.75e-24 109
Msa1039930 AT3G05750.2 33.466 502 270 18 91 585 1 445 3.03e-43 168
Msa1039930 AT3G05750.2 36.970 165 94 2 747 910 541 696 2.75e-24 109

Find 238 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGGTTTGTATTTGGTTTC+TGG 0.052036 7_1:+77255176 None:intergenic
AATAATAATTTATCGAAATT+TGG 0.105688 7_1:+77257087 None:intergenic
ACTTGGCAACACAGAGTTTA+TGG 0.185619 7_1:-77253184 Msa1039930:CDS
ACAATATTATGACCACTTAT+TGG 0.198103 7_1:-77252577 Msa1039930:three_prime_UTR
GTGAATCAGATTCGTTTATC+TGG 0.198909 7_1:+77253349 None:intergenic
AACTCGTGTTGTCGGCTTAT+TGG 0.224076 7_1:+77255045 None:intergenic
GGCAATGCTCGGTTTGTATT+TGG 0.230061 7_1:+77255169 None:intergenic
GGAATCAAGGGCACATAAAA+TGG 0.235717 7_1:-77255767 Msa1039930:CDS
TCAAAGCTCTTCCATGTCTA+TGG 0.251505 7_1:-77253301 Msa1039930:CDS
CAATGGTTTCAAATGGAAAT+AGG 0.279755 7_1:-77255255 Msa1039930:CDS
TTGAGAAATATTATGTGTTT+TGG 0.295276 7_1:+77254901 None:intergenic
TTTGAAGAGTTGGCATTGTT+TGG 0.301691 7_1:+77255448 None:intergenic
AAATTGCATACATTGGATAA+TGG 0.303822 7_1:-77257034 Msa1039930:five_prime_UTR
AATATGTGGAACACCAAATA+TGG 0.305461 7_1:-77253256 Msa1039930:CDS
TGGTTTGACTTAATCTCATT+TGG 0.318869 7_1:+77255211 None:intergenic
CAATATTATGACCACTTATT+GGG 0.325488 7_1:-77252576 Msa1039930:three_prime_UTR
AAAACTCTATTCCTCGTATA+TGG 0.327299 7_1:+77255568 None:intergenic
ATGTCAATGTTCAGCCTAAA+AGG 0.330024 7_1:-77254967 Msa1039930:CDS
AATAACCTATTGTGAGTAAC+TGG 0.338823 7_1:+77255682 None:intergenic
ATTTATCGAAATTTGGAAAA+GGG 0.347167 7_1:+77257094 None:intergenic
TTCATCTTGTTCCATGGTAT+TGG 0.348152 7_1:+77254418 None:intergenic
TTATTATTTGTTTCGATTTG+CGG 0.349974 7_1:-77257069 Msa1039930:five_prime_UTR
GTTTCTTTAGCCTGTTTGAT+TGG 0.353033 7_1:-77256711 Msa1039930:CDS
ATTAATTTGCCAATGGTTAC+CGG 0.354089 7_1:+77252517 None:intergenic
TCCAACAGATCAAAGAGATT+TGG 0.354587 7_1:+77253120 None:intergenic
TGATAAAGAGCTTAGTTATA+TGG 0.359210 7_1:-77252543 Msa1039930:three_prime_UTR
TTAACAAGTAAAGGAAAATC+AGG 0.359427 7_1:-77255322 Msa1039930:CDS
AAATCATTTCTTTCATGATC+AGG 0.359480 7_1:+77254836 None:intergenic
AATTGCATACATTGGATAAT+GGG 0.359846 7_1:-77257033 Msa1039930:five_prime_UTR
ACATTTCAGTTTGAAATCTC+TGG 0.359868 7_1:+77255731 None:intergenic
TACCGGAATCAAAGTTCTAT+AGG 0.363901 7_1:-77256188 Msa1039930:CDS
TCTTGATTTGAAAGAGAGAT+TGG 0.364775 7_1:-77255512 Msa1039930:CDS
GTGGAAGGGTTTCTCGTATA+AGG 0.366604 7_1:-77256938 Msa1039930:intron
TGAATTGATGTCACCCATCT+AGG 0.368625 7_1:+77252958 None:intergenic
AATGACATGAGCACTGGATA+TGG 0.378953 7_1:-77252847 Msa1039930:CDS
GATTTGGTGTTGACTCTCTT+GGG 0.382883 7_1:-77254643 Msa1039930:CDS
GCCAAATCTCTTTGATCTGT+TGG 0.383800 7_1:-77253121 Msa1039930:CDS
ACTTCATAAACACTACATAA+TGG 0.384326 7_1:+77252697 None:intergenic
GTCAACACCAAATCTAGTTC+TGG 0.386085 7_1:+77254652 None:intergenic
GTTGCAAATCATGGCCTAGA+TGG 0.388615 7_1:-77252972 Msa1039930:CDS
TTAAGTCGGAGAAGTCTTCT+TGG 0.388727 7_1:-77255798 Msa1039930:CDS
CATCAACTGCAGAAGTTTCA+AGG 0.394024 7_1:-77256236 Msa1039930:intron
TTGAAGAGTTGGCATTGTTT+GGG 0.398308 7_1:+77255449 None:intergenic
AGATTTGGTGTTGACTCTCT+TGG 0.399113 7_1:-77254644 Msa1039930:CDS
TACATTGGATAATGGGTGTT+TGG 0.400505 7_1:-77257026 Msa1039930:five_prime_UTR
ATTACATGAGCTGCATTCTT+CGG 0.400753 7_1:+77255628 None:intergenic
TAGAAACTTGGAAGATGTAA+TGG 0.401841 7_1:-77252887 Msa1039930:CDS
AGAAAACCATTACTCTTGAT+TGG 0.403562 7_1:+77255655 None:intergenic
GTACCAGCACATTGCCATTA+CGG 0.403636 7_1:+77255128 None:intergenic
CTAGATCTCAAACCAGTAGA+AGG 0.406206 7_1:+77254473 None:intergenic
GAAGATGAAACTCGTGTTGT+CGG 0.408487 7_1:+77255037 None:intergenic
AATCTCGTAAGAAGCTCGTT+TGG 0.415531 7_1:-77256681 Msa1039930:CDS
AGTAGCTAGACTAATGGGTT+TGG 0.415757 7_1:-77255959 Msa1039930:CDS
TTCTGTCAGTGAAAGTTACT+TGG 0.418753 7_1:-77253929 Msa1039930:CDS
GTTTCTGGCTCCTTGTGAGC+TGG 0.419501 7_1:+77255191 None:intergenic
CCATTCCAGTTACTCACAAT+AGG 0.420132 7_1:-77255687 Msa1039930:CDS
ATCTAGCATGGAAGAATAAA+CGG 0.422941 7_1:+77253392 None:intergenic
GGAGCAAGTCCGAGTAATAT+AGG 0.423629 7_1:-77256042 Msa1039930:CDS
TTTATGTGCCCTTGATTCCA+TGG 0.428294 7_1:+77255771 None:intergenic
TGATGCATTGAGTGTCTTGT+TGG 0.428531 7_1:-77254561 Msa1039930:CDS
CTCGGGCACACTTCTCTTCA+AGG 0.429593 7_1:+77254706 None:intergenic
TCATCTTCAGAAAGTTCTAC+TGG 0.430240 7_1:-77255022 Msa1039930:CDS
TAGATAAAGGTGGATGAGAA+TGG 0.432322 7_1:-77256063 Msa1039930:CDS
ATGGAAACCAGAACTAGATT+TGG 0.433236 7_1:-77254659 Msa1039930:CDS
GGAATGGGTTTAGCCGACTT+TGG 0.433498 7_1:+77255703 None:intergenic
TATTCTCATTTAACAAGTAA+AGG 0.433553 7_1:-77255331 Msa1039930:CDS
ACCGGAATCAAAGTTCTATA+GGG 0.434864 7_1:-77256187 Msa1039930:intron
GGGTTAGTAGCTAGACTAAT+GGG 0.436466 7_1:-77255964 Msa1039930:CDS
GAAGAGGGGTCAGAGGTTGA+AGG 0.439614 7_1:-77252793 Msa1039930:CDS
TTTGAAATCTCTGGAGTGAC+TGG 0.441555 7_1:+77255740 None:intergenic
ATGATTAACATTACCAGGTA+AGG 0.444021 7_1:+77256648 None:intergenic
GCAAGACAAAGCATCCAGTA+TGG 0.444703 7_1:-77254447 Msa1039930:CDS
AATTTATCGAAATTTGGAAA+AGG 0.444907 7_1:+77257093 None:intergenic
AGAAGGCTCCTCTGAGATTA+CGG 0.445668 7_1:+77254490 None:intergenic
AAGGTGGTGTTGTTGTCACT+TGG 0.445777 7_1:+77257203 None:intergenic
GAGCTTAGTTATATGGTAAC+CGG 0.445862 7_1:-77252536 Msa1039930:three_prime_UTR
AATGAAAGTGGAAATGATCT+AGG 0.445864 7_1:-77253991 Msa1039930:CDS
TCATGCTTCTCATTATAATG+AGG 0.446452 7_1:-77255875 Msa1039930:CDS
ATTTAGAATTCCAATCAAAC+AGG 0.448534 7_1:+77256701 None:intergenic
CAAAGGTACATCATCATTCA+AGG 0.450037 7_1:-77255392 Msa1039930:CDS
TTGTTGGAAGTTGCAAATCA+TGG 0.451707 7_1:-77252981 Msa1039930:CDS
GAGAGAGAGAGGTGTGAAGG+TGG 0.455430 7_1:+77257187 None:intergenic
ATCTCAGAGGAGCCTTCTAC+TGG 0.456510 7_1:-77254485 Msa1039930:CDS
CTATTGTGAGTAACTGGAAT+GGG 0.457459 7_1:+77255688 None:intergenic
AACTCTTCAAATTGTAAGCC+TGG 0.458250 7_1:-77255436 Msa1039930:CDS
GGTATTGGTGTTAACCATAC+TGG 0.458605 7_1:+77254433 None:intergenic
GGAAAATCTAGAGACCTTAC+CGG 0.458686 7_1:-77256205 Msa1039930:CDS
GACAGTGAAGACAGTGCATA+TGG 0.458972 7_1:-77253907 Msa1039930:intron
TTGTACAGACATCAGAAGTA+AGG 0.461314 7_1:-77254038 Msa1039930:intron
CTGAATGTGAGCACAAAAGA+AGG 0.467211 7_1:-77257140 Msa1039930:five_prime_UTR
GCGGCTGCTAAGATAATTGA+TGG 0.467501 7_1:-77255601 Msa1039930:CDS
AGGCTTACAATTTGAAGAGT+TGG 0.467696 7_1:+77255438 None:intergenic
TCATCAGTTTGTAGTGATGA+GGG 0.470024 7_1:-77256006 Msa1039930:CDS
CGGGTTAGTAGCTAGACTAA+TGG 0.470161 7_1:-77255965 Msa1039930:CDS
TTTATCGAAATTTGGAAAAG+GGG 0.473251 7_1:+77257095 None:intergenic
TGCTGATTCATGTTAAGCAC+TGG 0.476068 7_1:+77254338 None:intergenic
TAAGTCGGAGAAGTCTTCTT+GGG 0.478430 7_1:-77255797 Msa1039930:CDS
TTCCATCACTTGCTCGGCAG+AGG 0.481154 7_1:+77254676 None:intergenic
CAAAGCTCTTCCATGTCTAT+GGG 0.483022 7_1:-77253300 Msa1039930:CDS
TTTGGATTCTTTGCCAACTT+CGG 0.483220 7_1:-77255941 Msa1039930:CDS
TTTGTAGTGATGAGGGGTGT+GGG 0.483558 7_1:-77255999 Msa1039930:CDS
TTATAATAAATTGCATACAT+TGG 0.486264 7_1:-77257041 Msa1039930:five_prime_UTR
GGTTGTCAGCATTCTGATGC+TGG 0.486477 7_1:-77253970 Msa1039930:CDS
AGAGATACAATGGTTTCAAA+TGG 0.487273 7_1:-77255262 Msa1039930:CDS
CTCGGCAGAGGATAGTGACT+CGG 0.487665 7_1:+77254688 None:intergenic
CATGCTTCTCATTATAATGA+GGG 0.487956 7_1:-77255874 Msa1039930:CDS
TGATCAGGACTTCTTGCCTC+AGG 0.489473 7_1:+77254851 None:intergenic
TTTCAAATCAAGAATTCTCA+AGG 0.489682 7_1:+77255522 None:intergenic
TGAATCAGATTCGTTTATCT+GGG 0.491141 7_1:+77253350 None:intergenic
TGAGCACTGGATATGGGAAA+TGG 0.491726 7_1:-77252840 Msa1039930:CDS
TGGAACAATCAAACCTTACC+TGG 0.493911 7_1:-77256661 Msa1039930:intron
GAGAACCATCAGAGTACATC+AGG 0.496191 7_1:-77253099 Msa1039930:CDS
GAACATTTCATCTTGTTCCA+TGG 0.496613 7_1:+77254412 None:intergenic
ACCCTATAGAACTTTGATTC+CGG 0.497405 7_1:+77256186 None:intergenic
CTTGGGATGCCATGGAATCA+AGG 0.497669 7_1:-77255780 Msa1039930:CDS
CATGTCTATGGGGCAATATG+TGG 0.498871 7_1:-77253289 Msa1039930:CDS
TCTGTTTCTGACTGAGTGGA+AGG 0.499092 7_1:-77256953 Msa1039930:five_prime_UTR
TCACTCTAAGCTTGAAAGGA+AGG 0.500517 7_1:-77253055 Msa1039930:CDS
TTGTCTCCAATCAAGAGTAA+TGG 0.505640 7_1:-77255661 Msa1039930:CDS
AACTGCAGAAGTTTCAAGGC+AGG 0.506503 7_1:-77256232 Msa1039930:intron
CTATTCCTCGTATATGGCTG+AGG 0.507488 7_1:+77255574 None:intergenic
AGGAAACAGTACAATTGTAC+AGG 0.508439 7_1:+77252464 None:intergenic
TGAGGGTGCTCTTCGTTCCA+TGG 0.510083 7_1:-77255857 Msa1039930:CDS
ATAATGAGAAGCATGAAAGT+TGG 0.511372 7_1:+77255882 None:intergenic
AGCTCACCGACGTCCGAAGT+TGG 0.511646 7_1:+77255928 None:intergenic
TTCAGAGCAAAGAGATCTGT+GGG 0.512471 7_1:+77257158 None:intergenic
GCCTAAAAGGTCAAGCTCTA+GGG 0.513483 7_1:-77254954 Msa1039930:CDS
TCTGGTTTCCATCACTTGCT+CGG 0.514344 7_1:+77254670 None:intergenic
AGCCTAAAAGGTCAAGCTCT+AGG 0.514877 7_1:-77254955 Msa1039930:CDS
GAATATGTACAGAAAATACT+TGG 0.515552 7_1:-77253201 Msa1039930:CDS
GAAGAATGCAGCTCATGTAA+TGG 0.515627 7_1:-77255626 Msa1039930:CDS
TTCATCAGTTTGTAGTGATG+AGG 0.517539 7_1:-77256007 Msa1039930:CDS
CCATCTTATTAATTTGCCAA+TGG 0.518662 7_1:+77252510 None:intergenic
GACATTGAAGCATTTGAAGA+GGG 0.520513 7_1:-77252808 Msa1039930:CDS
ATCCTCTGCCGAGCAAGTGA+TGG 0.524003 7_1:-77254678 Msa1039930:CDS
AAGAGGGGTCAGAGGTTGAA+GGG 0.526933 7_1:-77252792 Msa1039930:CDS
CCATTGGCAAATTAATAAGA+TGG 0.529264 7_1:-77252510 Msa1039930:three_prime_UTR
CTGTTTCTGACTGAGTGGAA+GGG 0.530259 7_1:-77256952 Msa1039930:five_prime_UTR
TCGGACGTCGGTGAGCTCTC+CGG 0.532203 7_1:-77255922 Msa1039930:CDS
GAAGACTTCTCCGACTTAAG+TGG 0.533144 7_1:+77255802 None:intergenic
ACTACATAATGGAAGCTACC+AGG 0.534911 7_1:+77252708 None:intergenic
GGGTGTGGGAGTAAAGCTCC+CGG 0.536026 7_1:-77255985 Msa1039930:CDS
ATGACATGAGCACTGGATAT+GGG 0.538932 7_1:-77252846 Msa1039930:CDS
AGATACTTCTTCATCTAGCA+TGG 0.540273 7_1:+77253380 None:intergenic
GTCTGCAATGACATGAGCAC+TGG 0.540768 7_1:-77252853 Msa1039930:CDS
AGTATTATACTCCCAATAAG+TGG 0.544810 7_1:+77252565 None:intergenic
ATAGAACTTTGATTCCGGTA+AGG 0.546952 7_1:+77256191 None:intergenic
GTTTGTAGTGATGAGGGGTG+TGG 0.551029 7_1:-77256000 Msa1039930:CDS
ATGGGTTTAGCCGACTTTGG+AGG 0.553218 7_1:+77255706 None:intergenic
GATGGGTGACATCAATTCAA+AGG 0.554306 7_1:-77252954 Msa1039930:CDS
CATCAGTTTGTAGTGATGAG+GGG 0.554353 7_1:-77256005 Msa1039930:CDS
AAAACGTGTGCAAACCGTAA+TGG 0.554411 7_1:-77255142 Msa1039930:CDS
CATTAGTCTAGCTACTAACC+CGG 0.555448 7_1:+77255966 None:intergenic
GTCGACTAGCTTTCTAGACA+CGG 0.555611 7_1:+77255471 None:intergenic
AAGTTCTACTGGAGTCAGAA+AGG 0.557721 7_1:-77255011 Msa1039930:CDS
AGTCAGAAAGGCAACAAACA+AGG 0.557842 7_1:-77254999 Msa1039930:CDS
CCTATTGTGAGTAACTGGAA+TGG 0.558950 7_1:+77255687 None:intergenic
TTGCAAATCATGGCCTAGAT+GGG 0.560806 7_1:-77252971 Msa1039930:CDS
AGTCCGAGTAATATAGGAAG+TGG 0.562286 7_1:-77256036 Msa1039930:CDS
AAGATCACTCTAAGCTTGAA+AGG 0.562316 7_1:-77253059 Msa1039930:CDS
TCACTATCTATCATATGTGT+CGG 0.564183 7_1:+77254581 None:intergenic
ATGGCAGAAGAATTTGTCAT+GGG 0.564588 7_1:-77253165 Msa1039930:CDS
TGTAGCAGCAACAATGAAAG+TGG 0.564981 7_1:-77254003 Msa1039930:CDS
AGACTGTTTGATTGATGAGA+TGG 0.565226 7_1:-77252761 Msa1039930:CDS
GAAGTCTTCTTGGGATGCCA+TGG 0.565368 7_1:-77255788 Msa1039930:CDS
CACATATTGCCCCATAGACA+TGG 0.565694 7_1:+77253290 None:intergenic
CGTTCAAAGCAGAGATACAA+TGG 0.565930 7_1:-77255272 Msa1039930:CDS
CTGACAAAGAAACACTGAAG+TGG 0.567776 7_1:-77252646 Msa1039930:three_prime_UTR
TTGGGATGCCATGGAATCAA+GGG 0.569801 7_1:-77255779 Msa1039930:CDS
CAATTCTGTTTCTGACTGAG+TGG 0.571548 7_1:-77256957 Msa1039930:five_prime_UTR
TGAAATGTTGCCTCCAAAGT+CGG 0.572372 7_1:-77255716 Msa1039930:CDS
ATATGGTAACCGGTAACCAT+TGG 0.573027 7_1:-77252526 Msa1039930:three_prime_UTR
AGAAGTTTCAAGGCAGGGAA+AGG 0.573539 7_1:-77256226 Msa1039930:CDS
CAAAATAGTATGACTTCCAA+AGG 0.573557 7_1:-77255091 Msa1039930:CDS
TGCAGCTCATGTAATGGAGG+CGG 0.575246 7_1:-77255620 Msa1039930:CDS
TCGGGCACACTTCTCTTCAA+GGG 0.577563 7_1:+77254707 None:intergenic
GGAGCTGAATAGTGAAGCAC+CGG 0.578587 7_1:+77255903 None:intergenic
TGAAAACAATACTTCTTCAG+AGG 0.580060 7_1:+77252444 None:intergenic
AGGTGGTGTTGTTGTCACTT+GGG 0.580493 7_1:+77257204 None:intergenic
TATGGCAGAAGAATTTGTCA+TGG 0.581714 7_1:-77253166 Msa1039930:CDS
TTCAAATCAAGAATTCTCAA+GGG 0.586162 7_1:+77255523 None:intergenic
TGACATTGAAGCATTTGAAG+AGG 0.587741 7_1:-77252809 Msa1039930:CDS
CTACATAATGGAAGCTACCA+GGG 0.593223 7_1:+77252709 None:intergenic
TTAAGTCAAACCAGCTCACA+AGG 0.593311 7_1:-77255201 Msa1039930:CDS
CTTAAACACACCACTTAAGT+CGG 0.594149 7_1:-77255812 Msa1039930:CDS
CGCACGACGATAGTCATCCA+TGG 0.595188 7_1:+77255840 None:intergenic
ACATTGAAGCATTTGAAGAG+GGG 0.596973 7_1:-77252807 Msa1039930:CDS
AAATTAGAACTCCTCTCACC+AGG 0.597036 7_1:+77255418 None:intergenic
CACTTGAAAATGAAGTGACA+TGG 0.597864 7_1:-77253329 Msa1039930:CDS
GTGGCTGTCACACAAATATG+TGG 0.598071 7_1:-77253270 Msa1039930:CDS
TAACATGAATCAGCAACTGC+AGG 0.601446 7_1:-77254330 Msa1039930:intron
TATTCCTCGTATATGGCTGA+GGG 0.603780 7_1:+77255575 None:intergenic
TGTACAGACATCAGAAGTAA+GGG 0.605254 7_1:-77254037 Msa1039930:intron
AGCATTTGAAGAGGGGTCAG+AGG 0.607202 7_1:-77252800 Msa1039930:CDS
TCGGCAGAGGATAGTGACTC+GGG 0.608484 7_1:+77254689 None:intergenic
CAGTACAATTGTACAGGGGA+GGG 0.610328 7_1:+77252470 None:intergenic
GGTGACATCAATTCAAAGGA+AGG 0.612539 7_1:-77252950 Msa1039930:CDS
TGCAAAACTTGTTCTTTACG+AGG 0.614521 7_1:+77256978 None:intergenic
ACAGTACAATTGTACAGGGG+AGG 0.617088 7_1:+77252469 None:intergenic
TCTTTGCCAACTTCGGACGT+CGG 0.617948 7_1:-77255934 Msa1039930:CDS
ACTGCAGAAGTTTCAAGGCA+GGG 0.617971 7_1:-77256231 Msa1039930:intron
TCGCCACTTCCTATATTACT+CGG 0.618342 7_1:+77256033 None:intergenic
ACATCAGGTACATCATATTG+TGG 0.620205 7_1:-77253084 Msa1039930:CDS
ATTCAGAGCAAAGAGATCTG+TGG 0.625950 7_1:+77257157 None:intergenic
AGAGGGGTCAGAGGTTGAAG+GGG 0.626738 7_1:-77252791 Msa1039930:CDS
AATATTGTAGTACTGCCCAA+TGG 0.627557 7_1:+77252592 None:intergenic
TGAATGTGAGCACAAAAGAA+GGG 0.627760 7_1:-77257139 Msa1039930:five_prime_UTR
AAACCGTAATGGCAATGTGC+TGG 0.628053 7_1:-77255131 Msa1039930:CDS
CTATCGCTGTTGTTCAAGTG+AGG 0.630068 7_1:-77254363 Msa1039930:CDS
CAGAGCAAAGAGATCTGTGG+GGG 0.630488 7_1:+77257160 None:intergenic
AAACTTGGAAGATGTAATGG+TGG 0.636219 7_1:-77252884 Msa1039930:CDS
AAAGGTACATCATCATTCAA+GGG 0.636259 7_1:-77255391 Msa1039930:CDS
TTTGGCAGATGAGTTATACA+GGG 0.636557 7_1:-77252923 Msa1039930:CDS
GGAAACAGTACAATTGTACA+GGG 0.636886 7_1:+77252465 None:intergenic
ATGTACCTGATGTACTCTGA+TGG 0.636993 7_1:+77253094 None:intergenic
ACATGAGCTGCATTCTTCGG+CGG 0.637093 7_1:+77255631 None:intergenic
AAGTAACTTTCACTGACAGA+AGG 0.642170 7_1:+77253931 None:intergenic
GAATGCAGCTCATGTAATGG+AGG 0.646804 7_1:-77255623 Msa1039930:CDS
GTCAGAAAGGCAACAAACAA+GGG 0.647142 7_1:-77254998 Msa1039930:CDS
TAGGGCAATCAATAACCGAA+AGG 0.649794 7_1:-77254936 Msa1039930:CDS
TTTCAAAATATCAAGCGACA+TGG 0.652102 7_1:-77253229 Msa1039930:CDS
TCGACTAGCTTTCTAGACAC+GGG 0.654295 7_1:+77255472 None:intergenic
TATGGTTAACACCAATACCA+TGG 0.655461 7_1:-77254429 Msa1039930:CDS
GGTGTGGGAGTAAAGCTCCC+GGG 0.662258 7_1:-77255984 Msa1039930:CDS
TGACAGCAGAGGTGTTCCTG+AGG 0.669852 7_1:-77254867 Msa1039930:CDS
CAAATTGTAAGCCTGGTGAG+AGG 0.672573 7_1:-77255429 Msa1039930:CDS
TACATAATGGAAGCTACCAG+GGG 0.677308 7_1:+77252710 None:intergenic
GTTTAAAATATCTCATGACA+CGG 0.683768 7_1:-77252369 Msa1039930:three_prime_UTR
ATTAGTCTAGCTACTAACCC+GGG 0.683901 7_1:+77255967 None:intergenic
AAAGCTCTTCCATGTCTATG+GGG 0.687339 7_1:-77253299 Msa1039930:CDS
CATGGATGACTATCGTCGTG+CGG 0.707839 7_1:-77255839 Msa1039930:CDS
GAAGCCCTCAGCCATATACG+AGG 0.718262 7_1:-77255579 Msa1039930:CDS
TCAGTGTACCGTAATCTCAG+AGG 0.719931 7_1:-77254498 Msa1039930:CDS
AGAGCAAAGAGATCTGTGGG+GGG 0.745744 7_1:+77257161 None:intergenic
TCAGAGCAAAGAGATCTGTG+GGG 0.751069 7_1:+77257159 None:intergenic
GAAACAGTACAATTGTACAG+GGG 0.785668 7_1:+77252466 None:intergenic
ACATAATGGAAGCTACCAGG+GGG 0.795203 7_1:+77252711 None:intergenic
TCTGAGATTACGGTACACTG+AGG 0.805122 7_1:+77254500 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATTTATCGAAATT+TGG + chr7_1:77252494-77252513 None:intergenic 10.0%
!!! ATTTTTGAAAAATGTATAAA+AGG + chr7_1:77255806-77255825 None:intergenic 10.0%
!!! CAATTTTATATGTATTATAA+GGG + chr7_1:77256130-77256149 None:intergenic 10.0%
!! TTATAATAAATTGCATACAT+TGG - chr7_1:77252537-77252556 Msa1039930:three_prime_UTR 15.0%
!! AATAAGCTAAAAACAAATTA+TGG + chr7_1:77253121-77253140 None:intergenic 15.0%
!!! TTTGATTTATTTTTTTGGTT+TGG - chr7_1:77253477-77253496 Msa1039930:intron 15.0%
!!! ATTGAAATTGTTTTAGATAA+AGG - chr7_1:77253502-77253521 Msa1039930:intron 15.0%
!!! GTAAAATAATTTTACACTAA+AGG + chr7_1:77255903-77255922 None:intergenic 15.0%
!!! GCAATTTTATATGTATTATA+AGG + chr7_1:77256131-77256150 None:intergenic 15.0%
!!! ATTGATATTAAATTGTTTTG+TGG + chr7_1:77257170-77257189 None:intergenic 15.0%
!! ATTTATCGAAATTTGGAAAA+GGG + chr7_1:77252487-77252506 None:intergenic 20.0%
!! AATTTATCGAAATTTGGAAA+AGG + chr7_1:77252488-77252507 None:intergenic 20.0%
!!! TTATTATTTGTTTCGATTTG+CGG - chr7_1:77252509-77252528 Msa1039930:three_prime_UTR 20.0%
!! ATATAGGAAAAAAGAAGAAT+TGG - chr7_1:77252817-77252836 Msa1039930:CDS 20.0%
!! ATAGCTTACACAAAAATATT+TGG - chr7_1:77253178-77253197 Msa1039930:CDS 20.0%
!! TATTCTCATTTAACAAGTAA+AGG - chr7_1:77254247-77254266 Msa1039930:intron 20.0%
!!! AAATATTATGTGTTTTGGAT+GGG + chr7_1:77254675-77254694 None:intergenic 20.0%
!!! TTGAGAAATATTATGTGTTT+TGG + chr7_1:77254680-77254699 None:intergenic 20.0%
!!! AGTTGTAAAATTGCATTTTA+TGG + chr7_1:77254779-77254798 None:intergenic 20.0%
!! AACAATTATTCTCAGTAAAT+TGG + chr7_1:77255410-77255429 None:intergenic 20.0%
!! AAAAATGTATAAAAGGCTAA+AGG + chr7_1:77255799-77255818 None:intergenic 20.0%
!!! ATTTTGAAATCTACCATATT+TGG + chr7_1:77256338-77256357 None:intergenic 20.0%
!!! TTTGTCAGAATTTTAATCAA+TGG + chr7_1:77256920-77256939 None:intergenic 20.0%
!!! ATGAGATATTTTAAACTTCT+AGG + chr7_1:77257205-77257224 None:intergenic 20.0%
! TTTATCGAAATTTGGAAAAG+GGG + chr7_1:77252486-77252505 None:intergenic 25.0%
! AAATTGCATACATTGGATAA+TGG - chr7_1:77252544-77252563 Msa1039930:three_prime_UTR 25.0%
! AATTGCATACATTGGATAAT+GGG - chr7_1:77252545-77252564 Msa1039930:three_prime_UTR 25.0%
! AATTCGTTAGATTTCAGATT+TGG - chr7_1:77252708-77252727 Msa1039930:three_prime_UTR 25.0%
! ATTCGTTAGATTTCAGATTT+GGG - chr7_1:77252709-77252728 Msa1039930:three_prime_UTR 25.0%
! AACAGTATCAAAATAGTGAA+AGG + chr7_1:77252773-77252792 None:intergenic 25.0%
!!! TTCACTATTTTGATACTGTT+TGG - chr7_1:77252773-77252792 Msa1039930:CDS 25.0%
! GAAAAAAGAAGAATTGGAAA+TGG - chr7_1:77252823-77252842 Msa1039930:CDS 25.0%
!! ATTTAGAATTCCAATCAAAC+AGG + chr7_1:77252880-77252899 None:intergenic 25.0%
! TATGTAAGTTTATCCAAACA+TGG - chr7_1:77253261-77253280 Msa1039930:CDS 25.0%
! GAATAATATATGACCATGTT+TGG + chr7_1:77253277-77253296 None:intergenic 25.0%
!! GTAACAGAAACATTTAGAAT+AGG + chr7_1:77253323-77253342 None:intergenic 25.0%
!!! GAAATTGTTTTAGATAAAGG+TGG - chr7_1:77253505-77253524 Msa1039930:intron 25.0%
! TTCAAATCAAGAATTCTCAA+GGG + chr7_1:77254058-77254077 None:intergenic 25.0%
! TTTCAAATCAAGAATTCTCA+AGG + chr7_1:77254059-77254078 None:intergenic 25.0%
! TTAACAAGTAAAGGAAAATC+AGG - chr7_1:77254256-77254275 Msa1039930:intron 25.0%
!!! TTTTGAAGTTGATTTACCTT+TGG + chr7_1:77254506-77254525 None:intergenic 25.0%
!!! AATATTATGTGTTTTGGATG+GGG + chr7_1:77254674-77254693 None:intergenic 25.0%
!!! GAAATATTATGTGTTTTGGA+TGG + chr7_1:77254676-77254695 None:intergenic 25.0%
! AAATCATTTCTTTCATGATC+AGG + chr7_1:77254745-77254764 None:intergenic 25.0%
!! AAATGCAATTTTACAACTGA+TGG - chr7_1:77254781-77254800 Msa1039930:CDS 25.0%
!!! ATAGCAATAATTTTTTGGGA+TGG + chr7_1:77254975-77254994 None:intergenic 25.0%
!!! GGAGATAGCAATAATTTTTT+GGG + chr7_1:77254979-77254998 None:intergenic 25.0%
! ATACTCAGTTTCATATGTAA+TGG - chr7_1:77255297-77255316 Msa1039930:CDS 25.0%
!!! ATATTGTTTTGACTATGTGT+TGG + chr7_1:77255380-77255399 None:intergenic 25.0%
!! TGAGTCTAATTTTCCAAATT+AGG - chr7_1:77255454-77255473 Msa1039930:CDS 25.0%
!!! CTTTGAGATCAAAACAAATA+AGG + chr7_1:77255723-77255742 None:intergenic 25.0%
! GTAAGAAGTAAAAAGTAAAC+AGG + chr7_1:77255756-77255775 None:intergenic 25.0%
! AATCACATCTCATATATGTT+AGG - chr7_1:77255934-77255953 Msa1039930:CDS 25.0%
! CATATTTGTTCATCAATGTT+TGG - chr7_1:77256059-77256078 Msa1039930:CDS 25.0%
! GAATATGTACAGAAAATACT+TGG - chr7_1:77256377-77256396 Msa1039930:intron 25.0%
! ACTTCATAAACACTACATAA+TGG + chr7_1:77256884-77256903 None:intergenic 25.0%
! ACAATATTATGACCACTTAT+TGG - chr7_1:77257001-77257020 Msa1039930:five_prime_UTR 25.0%
! CAATATTATGACCACTTATT+GGG - chr7_1:77257002-77257021 Msa1039930:five_prime_UTR 25.0%
! TGATAAAGAGCTTAGTTATA+TGG - chr7_1:77257035-77257054 Msa1039930:five_prime_UTR 25.0%
!!! GATACTGTTTGGTAATGTTT+TGG - chr7_1:77252784-77252803 Msa1039930:CDS 30.0%
!!! TTTTGGTTTGACTGTGATAT+AGG - chr7_1:77252801-77252820 Msa1039930:CDS 30.0%
ATGGAGAAAAAACGTTCAAA+AGG - chr7_1:77252842-77252861 Msa1039930:CDS 30.0%
ATGATTAACATTACCAGGTA+AGG + chr7_1:77252933-77252952 None:intergenic 30.0%
!! AAACCAAACAGGTTCTAAAT+AGG + chr7_1:77253019-77253038 None:intergenic 30.0%
TCAAATAAGTCAAACCAAAC+AGG + chr7_1:77253030-77253049 None:intergenic 30.0%
!! TGTTTGGTTTGACTTATTTG+AGG - chr7_1:77253029-77253048 Msa1039930:CDS 30.0%
! ATAATGAGAAGCATGAAAGT+TGG + chr7_1:77253699-77253718 None:intergenic 30.0%
TCATGCTTCTCATTATAATG+AGG - chr7_1:77253703-77253722 Msa1039930:intron 30.0%
CATGCTTCTCATTATAATGA+GGG - chr7_1:77253704-77253723 Msa1039930:intron 30.0%
! ACATTTCAGTTTGAAATCTC+TGG + chr7_1:77253850-77253869 None:intergenic 30.0%
AATAACCTATTGTGAGTAAC+TGG + chr7_1:77253899-77253918 None:intergenic 30.0%
AGAAAACCATTACTCTTGAT+TGG + chr7_1:77253926-77253945 None:intergenic 30.0%
AAAACTCTATTCCTCGTATA+TGG + chr7_1:77254013-77254032 None:intergenic 30.0%
! TCTTGATTTGAAAGAGAGAT+TGG - chr7_1:77254066-77254085 Msa1039930:intron 30.0%
!! AGGAGTTCTAATTTTGACAA+AGG - chr7_1:77254169-77254188 Msa1039930:intron 30.0%
! AAAGGTACATCATCATTCAA+GGG - chr7_1:77254187-77254206 Msa1039930:intron 30.0%
AGAGATACAATGGTTTCAAA+TGG - chr7_1:77254316-77254335 Msa1039930:intron 30.0%
CAATGGTTTCAAATGGAAAT+AGG - chr7_1:77254323-77254342 Msa1039930:intron 30.0%
! TGGTTTGACTTAATCTCATT+TGG + chr7_1:77254370-77254389 None:intergenic 30.0%
CAAAATAGTATGACTTCCAA+AGG - chr7_1:77254487-77254506 Msa1039930:CDS 30.0%
!! ATATTATGTGTTTTGGATGG+GGG + chr7_1:77254673-77254692 None:intergenic 30.0%
!!! CGGAGATAGCAATAATTTTT+TGG + chr7_1:77254980-77254999 None:intergenic 30.0%
TCACTATCTATCATATGTGT+CGG + chr7_1:77255000-77255019 None:intergenic 30.0%
GGAAAATTAGACTCAGTAAA+TGG + chr7_1:77255449-77255468 None:intergenic 30.0%
AATGAAAGTGGAAATGATCT+AGG - chr7_1:77255587-77255606 Msa1039930:CDS 30.0%
ATGTTTATCTTTCCCTTCAA+TGG - chr7_1:77255696-77255715 Msa1039930:CDS 30.0%
TGTTTATCTTTCCCTTCAAT+GGG - chr7_1:77255697-77255716 Msa1039930:CDS 30.0%
AGATCATCATGTGATTTGAT+TGG - chr7_1:77255975-77255994 Msa1039930:CDS 30.0%
GATCATCATGTGATTTGATT+GGG - chr7_1:77255976-77255995 Msa1039930:CDS 30.0%
! TATTATAAGGGCATATGCTA+CGG + chr7_1:77256118-77256137 None:intergenic 30.0%
ATCTAGCATGGAAGAATAAA+CGG + chr7_1:77256189-77256208 None:intergenic 30.0%
TGAATCAGATTCGTTTATCT+GGG + chr7_1:77256231-77256250 None:intergenic 30.0%
AATATGTGGAACACCAAATA+TGG - chr7_1:77256322-77256341 Msa1039930:intron 30.0%
TTTCAAAATATCAAGCGACA+TGG - chr7_1:77256349-77256368 Msa1039930:intron 30.0%
! AGATGTGAAAAAGCTTTTGT+TGG - chr7_1:77256581-77256600 Msa1039930:intron 30.0%
! AATTCAAAGGAAGGACTTTT+TGG - chr7_1:77256637-77256656 Msa1039930:intron 30.0%
!!! GATGATGAGTTTTAGAAACT+TGG - chr7_1:77256679-77256698 Msa1039930:CDS 30.0%
TAGAAACTTGGAAGATGTAA+TGG - chr7_1:77256691-77256710 Msa1039930:CDS 30.0%
AGTATTATACTCCCAATAAG+TGG + chr7_1:77257016-77257035 None:intergenic 30.0%
!! ATTAATTTGCCAATGGTTAC+CGG + chr7_1:77257064-77257083 None:intergenic 30.0%
!! CCATCTTATTAATTTGCCAA+TGG + chr7_1:77257071-77257090 None:intergenic 30.0%
CCATTGGCAAATTAATAAGA+TGG - chr7_1:77257068-77257087 Msa1039930:five_prime_UTR 30.0%
TGAAAACAATACTTCTTCAG+AGG + chr7_1:77257137-77257156 None:intergenic 30.0%
TGAATGTGAGCACAAAAGAA+GGG - chr7_1:77252439-77252458 Msa1039930:three_prime_UTR 35.0%
!! TACATTGGATAATGGGTGTT+TGG - chr7_1:77252552-77252571 Msa1039930:three_prime_UTR 35.0%
! TGCAAAACTTGTTCTTTACG+AGG + chr7_1:77252603-77252622 None:intergenic 35.0%
GTTTCTTTAGCCTGTTTGAT+TGG - chr7_1:77252867-77252886 Msa1039930:CDS 35.0%
ATGGCATGATTAACATTACC+AGG + chr7_1:77252938-77252957 None:intergenic 35.0%
AAGCTATCTTGTAGAGCTTA+TGG + chr7_1:77253145-77253164 None:intergenic 35.0%
ATAGAACTTTGATTCCGGTA+AGG + chr7_1:77253390-77253409 None:intergenic 35.0%
TACCGGAATCAAAGTTCTAT+AGG - chr7_1:77253390-77253409 Msa1039930:CDS 35.0%
ACCGGAATCAAAGTTCTATA+GGG - chr7_1:77253391-77253410 Msa1039930:CDS 35.0%
ACCCTATAGAACTTTGATTC+CGG + chr7_1:77253395-77253414 None:intergenic 35.0%
AAAAGCAGACAGCAAAAAGT+GGG + chr7_1:77253430-77253449 None:intergenic 35.0%
AAAAAGCAGACAGCAAAAAG+TGG + chr7_1:77253431-77253450 None:intergenic 35.0%
TAGATAAAGGTGGATGAGAA+TGG - chr7_1:77253515-77253534 Msa1039930:intron 35.0%
TTCATCAGTTTGTAGTGATG+AGG - chr7_1:77253571-77253590 Msa1039930:intron 35.0%
TCATCAGTTTGTAGTGATGA+GGG - chr7_1:77253572-77253591 Msa1039930:intron 35.0%
TTTGGATTCTTTGCCAACTT+CGG - chr7_1:77253637-77253656 Msa1039930:intron 35.0%
CTTAAACACACCACTTAAGT+CGG - chr7_1:77253766-77253785 Msa1039930:intron 35.0%
CTATTGTGAGTAACTGGAAT+GGG + chr7_1:77253893-77253912 None:intergenic 35.0%
TTGTCTCCAATCAAGAGTAA+TGG - chr7_1:77253917-77253936 Msa1039930:CDS 35.0%
ATTACATGAGCTGCATTCTT+CGG + chr7_1:77253953-77253972 None:intergenic 35.0%
!! ACGAGGAATAGAGTTTTATC+AGG - chr7_1:77254016-77254035 Msa1039930:CDS 35.0%
!! AGGAATAGAGTTTTATCAGG+CGG - chr7_1:77254019-77254038 Msa1039930:CDS 35.0%
TTGAAGAGTTGGCATTGTTT+GGG + chr7_1:77254132-77254151 None:intergenic 35.0%
TTTGAAGAGTTGGCATTGTT+TGG + chr7_1:77254133-77254152 None:intergenic 35.0%
AGGCTTACAATTTGAAGAGT+TGG + chr7_1:77254143-77254162 None:intergenic 35.0%
AACTCTTCAAATTGTAAGCC+TGG - chr7_1:77254142-77254161 Msa1039930:intron 35.0%
! CAAAGGTACATCATCATTCA+AGG - chr7_1:77254186-77254205 Msa1039930:intron 35.0%
!!! TTGTTTTTGGCTTGCATTGT+AGG + chr7_1:77254286-77254305 None:intergenic 35.0%
!! TCTGCTTTGAACGTTGTTTT+TGG + chr7_1:77254299-77254318 None:intergenic 35.0%
TCATCTTCAGAAAGTTCTAC+TGG - chr7_1:77254556-77254575 Msa1039930:CDS 35.0%
ATGTCAATGTTCAGCCTAAA+AGG - chr7_1:77254611-77254630 Msa1039930:CDS 35.0%
! AAGAAAAAGTATGACAGCAG+AGG - chr7_1:77254700-77254719 Msa1039930:CDS 35.0%
ATGGAAACCAGAACTAGATT+TGG - chr7_1:77254919-77254938 Msa1039930:CDS 35.0%
TATGGTTAACACCAATACCA+TGG - chr7_1:77255149-77255168 Msa1039930:CDS 35.0%
TTCATCTTGTTCCATGGTAT+TGG + chr7_1:77255163-77255182 None:intergenic 35.0%
GAACATTTCATCTTGTTCCA+TGG + chr7_1:77255169-77255188 None:intergenic 35.0%
!! TTTTGACTATGTGTTGGACT+TGG + chr7_1:77255374-77255393 None:intergenic 35.0%
AAACTGCAGACAACCTAATT+TGG + chr7_1:77255470-77255489 None:intergenic 35.0%
TTGTACAGACATCAGAAGTA+AGG - chr7_1:77255540-77255559 Msa1039930:CDS 35.0%
TGTACAGACATCAGAAGTAA+GGG - chr7_1:77255541-77255560 Msa1039930:CDS 35.0%
AAGTAACTTTCACTGACAGA+AGG + chr7_1:77255650-77255669 None:intergenic 35.0%
TTCTGTCAGTGAAAGTTACT+TGG - chr7_1:77255649-77255668 Msa1039930:CDS 35.0%
AACAAATAAGGCCCATTGAA+GGG + chr7_1:77255711-77255730 None:intergenic 35.0%
AAACAAATAAGGCCCATTGA+AGG + chr7_1:77255712-77255731 None:intergenic 35.0%
CTAACAAGTTTGTAACACAC+AGG + chr7_1:77255863-77255882 None:intergenic 35.0%
CATGATGATCTCACTTTGTT+AGG + chr7_1:77255966-77255985 None:intergenic 35.0%
CGGAAAAGCAACAAAATTCA+TGG + chr7_1:77256098-77256117 None:intergenic 35.0%
GAAAACAGGAAGAAACTGAT+CGG + chr7_1:77256158-77256177 None:intergenic 35.0%
! ATCAGTTTCTTCCTGTTTTC+AGG - chr7_1:77256158-77256177 Msa1039930:intron 35.0%
AGATACTTCTTCATCTAGCA+TGG + chr7_1:77256201-77256220 None:intergenic 35.0%
GTGAATCAGATTCGTTTATC+TGG + chr7_1:77256232-77256251 None:intergenic 35.0%
CACTTGAAAATGAAGTGACA+TGG - chr7_1:77256249-77256268 Msa1039930:intron 35.0%
TATGGCAGAAGAATTTGTCA+TGG - chr7_1:77256412-77256431 Msa1039930:intron 35.0%
ATGGCAGAAGAATTTGTCAT+GGG - chr7_1:77256413-77256432 Msa1039930:intron 35.0%
TCCAACAGATCAAAGAGATT+TGG + chr7_1:77256461-77256480 None:intergenic 35.0%
ACATCAGGTACATCATATTG+TGG - chr7_1:77256494-77256513 Msa1039930:intron 35.0%
AAGATCACTCTAAGCTTGAA+AGG - chr7_1:77256519-77256538 Msa1039930:intron 35.0%
!! CTTTTTCACATCTCAACTCT+AGG + chr7_1:77256574-77256593 None:intergenic 35.0%
TTGTTGGAAGTTGCAAATCA+TGG - chr7_1:77256597-77256616 Msa1039930:intron 35.0%
! TTTTGGCAGATGAGTTATAC+AGG - chr7_1:77256654-77256673 Msa1039930:intron 35.0%
TTTGGCAGATGAGTTATACA+GGG - chr7_1:77256655-77256674 Msa1039930:intron 35.0%
AAACTTGGAAGATGTAATGG+TGG - chr7_1:77256694-77256713 Msa1039930:CDS 35.0%
! TGACATTGAAGCATTTGAAG+AGG - chr7_1:77256769-77256788 Msa1039930:intron 35.0%
! GACATTGAAGCATTTGAAGA+GGG - chr7_1:77256770-77256789 Msa1039930:intron 35.0%
! ACATTGAAGCATTTGAAGAG+GGG - chr7_1:77256771-77256790 Msa1039930:intron 35.0%
AGACTGTTTGATTGATGAGA+TGG - chr7_1:77256817-77256836 Msa1039930:intron 35.0%
! AGTCCATCATGTTTTTCCAT+TGG - chr7_1:77256970-77256989 Msa1039930:five_prime_UTR 35.0%
! GTCCATCATGTTTTTCCATT+GGG - chr7_1:77256971-77256990 Msa1039930:five_prime_UTR 35.0%
AATATTGTAGTACTGCCCAA+TGG + chr7_1:77256989-77257008 None:intergenic 35.0%
GAGCTTAGTTATATGGTAAC+CGG - chr7_1:77257042-77257061 Msa1039930:five_prime_UTR 35.0%
GAAACAGTACAATTGTACAG+GGG + chr7_1:77257115-77257134 None:intergenic 35.0%
GGAAACAGTACAATTGTACA+GGG + chr7_1:77257116-77257135 None:intergenic 35.0%
AGGAAACAGTACAATTGTAC+AGG + chr7_1:77257117-77257136 None:intergenic 35.0%
TTCAGAGCAAAGAGATCTGT+GGG + chr7_1:77252423-77252442 None:intergenic 40.0%
ATTCAGAGCAAAGAGATCTG+TGG + chr7_1:77252424-77252443 None:intergenic 40.0%
CTGAATGTGAGCACAAAAGA+AGG - chr7_1:77252438-77252457 Msa1039930:three_prime_UTR 40.0%
!! CAATTCTGTTTCTGACTGAG+TGG - chr7_1:77252621-77252640 Msa1039930:three_prime_UTR 40.0%
AATCTCGTAAGAAGCTCGTT+TGG - chr7_1:77252897-77252916 Msa1039930:CDS 40.0%
TGGAACAATCAAACCTTACC+TGG - chr7_1:77252917-77252936 Msa1039930:CDS 40.0%
ATTAGAGAGAGAGAGAGACA+TGG + chr7_1:77252957-77252976 None:intergenic 40.0%
!! GGTTCTAAATAGGTGGACAA+AGG + chr7_1:77253009-77253028 None:intergenic 40.0%
!! CCAAACAGGTTCTAAATAGG+TGG + chr7_1:77253016-77253035 None:intergenic 40.0%
! CCACCTATTTAGAACCTGTT+TGG - chr7_1:77253013-77253032 Msa1039930:CDS 40.0%
CATCAACTGCAGAAGTTTCA+AGG - chr7_1:77253342-77253361 Msa1039930:CDS 40.0%
GGAAAATCTAGAGACCTTAC+CGG - chr7_1:77253373-77253392 Msa1039930:CDS 40.0%
AAAGCAGACAGCAAAAAGTG+GGG + chr7_1:77253429-77253448 None:intergenic 40.0%
AGTCCGAGTAATATAGGAAG+TGG - chr7_1:77253542-77253561 Msa1039930:intron 40.0%
TCGCCACTTCCTATATTACT+CGG + chr7_1:77253548-77253567 None:intergenic 40.0%
CATCAGTTTGTAGTGATGAG+GGG - chr7_1:77253573-77253592 Msa1039930:intron 40.0%
! ATTAGTCTAGCTACTAACCC+GGG + chr7_1:77253614-77253633 None:intergenic 40.0%
! CATTAGTCTAGCTACTAACC+CGG + chr7_1:77253615-77253634 None:intergenic 40.0%
! GGGTTAGTAGCTAGACTAAT+GGG - chr7_1:77253614-77253633 Msa1039930:intron 40.0%
!! AGTAGCTAGACTAATGGGTT+TGG - chr7_1:77253619-77253638 Msa1039930:intron 40.0%
TTAAGTCGGAGAAGTCTTCT+TGG - chr7_1:77253780-77253799 Msa1039930:intron 40.0%
TAAGTCGGAGAAGTCTTCTT+GGG - chr7_1:77253781-77253800 Msa1039930:intron 40.0%
TTTATGTGCCCTTGATTCCA+TGG + chr7_1:77253810-77253829 None:intergenic 40.0%
! GGAATCAAGGGCACATAAAA+TGG - chr7_1:77253811-77253830 Msa1039930:intron 40.0%
!! TTTGAAATCTCTGGAGTGAC+TGG + chr7_1:77253841-77253860 None:intergenic 40.0%
TGAAATGTTGCCTCCAAAGT+CGG - chr7_1:77253862-77253881 Msa1039930:intron 40.0%
CCTATTGTGAGTAACTGGAA+TGG + chr7_1:77253894-77253913 None:intergenic 40.0%
CCATTCCAGTTACTCACAAT+AGG - chr7_1:77253891-77253910 Msa1039930:intron 40.0%
GAAGAATGCAGCTCATGTAA+TGG - chr7_1:77253952-77253971 Msa1039930:CDS 40.0%
TATTCCTCGTATATGGCTGA+GGG + chr7_1:77254006-77254025 None:intergenic 40.0%
!! GGAATAGAGTTTTATCAGGC+GGG - chr7_1:77254020-77254039 Msa1039930:CDS 40.0%
AAATTAGAACTCCTCTCACC+AGG + chr7_1:77254163-77254182 None:intergenic 40.0%
CGTTCAAAGCAGAGATACAA+TGG - chr7_1:77254306-77254325 Msa1039930:intron 40.0%
TTAAGTCAAACCAGCTCACA+AGG - chr7_1:77254377-77254396 Msa1039930:CDS 40.0%
! CTCGGTTTGTATTTGGTTTC+TGG + chr7_1:77254405-77254424 None:intergenic 40.0%
AAAACGTGTGCAAACCGTAA+TGG - chr7_1:77254436-77254455 Msa1039930:CDS 40.0%
GAAGATGAAACTCGTGTTGT+CGG + chr7_1:77254544-77254563 None:intergenic 40.0%
AAGTTCTACTGGAGTCAGAA+AGG - chr7_1:77254567-77254586 Msa1039930:CDS 40.0%
AGTCAGAAAGGCAACAAACA+AGG - chr7_1:77254579-77254598 Msa1039930:CDS 40.0%
GTCAGAAAGGCAACAAACAA+GGG - chr7_1:77254580-77254599 Msa1039930:CDS 40.0%
TAGGGCAATCAATAACCGAA+AGG - chr7_1:77254642-77254661 Msa1039930:CDS 40.0%
! GTCAACACCAAATCTAGTTC+TGG + chr7_1:77254929-77254948 None:intergenic 40.0%
!! AGATTTGGTGTTGACTCTCT+TGG - chr7_1:77254934-77254953 Msa1039930:CDS 40.0%
!! GATTTGGTGTTGACTCTCTT+GGG - chr7_1:77254935-77254954 Msa1039930:CDS 40.0%
TGATGCATTGAGTGTCTTGT+TGG - chr7_1:77255017-77255036 Msa1039930:CDS 40.0%
CTAGATCTCAAACCAGTAGA+AGG + chr7_1:77255108-77255127 None:intergenic 40.0%
!! GGTATTGGTGTTAACCATAC+TGG + chr7_1:77255148-77255167 None:intergenic 40.0%
!! TGCTGATTCATGTTAAGCAC+TGG + chr7_1:77255243-77255262 None:intergenic 40.0%
TAACATGAATCAGCAACTGC+AGG - chr7_1:77255248-77255267 Msa1039930:CDS 40.0%
TGTAGCAGCAACAATGAAAG+TGG - chr7_1:77255575-77255594 Msa1039930:CDS 40.0%
AACACACAGGTGCAACATAA+AGG + chr7_1:77255850-77255869 None:intergenic 40.0%
TCAAAGCTCTTCCATGTCTA+TGG - chr7_1:77256277-77256296 Msa1039930:intron 40.0%
CAAAGCTCTTCCATGTCTAT+GGG - chr7_1:77256278-77256297 Msa1039930:intron 40.0%
AAAGCTCTTCCATGTCTATG+GGG - chr7_1:77256279-77256298 Msa1039930:intron 40.0%
ACTTGGCAACACAGAGTTTA+TGG - chr7_1:77256394-77256413 Msa1039930:intron 40.0%
GCCAAATCTCTTTGATCTGT+TGG - chr7_1:77256457-77256476 Msa1039930:intron 40.0%
ATGTACCTGATGTACTCTGA+TGG + chr7_1:77256487-77256506 None:intergenic 40.0%
TCACTCTAAGCTTGAAAGGA+AGG - chr7_1:77256523-77256542 Msa1039930:intron 40.0%
TTGCAAATCATGGCCTAGAT+GGG - chr7_1:77256607-77256626 Msa1039930:intron 40.0%
TGAATTGATGTCACCCATCT+AGG + chr7_1:77256623-77256642 None:intergenic 40.0%
GATGGGTGACATCAATTCAA+AGG - chr7_1:77256624-77256643 Msa1039930:intron 40.0%
GGTGACATCAATTCAAAGGA+AGG - chr7_1:77256628-77256647 Msa1039930:intron 40.0%
!! AATGACATGAGCACTGGATA+TGG - chr7_1:77256731-77256750 Msa1039930:CDS 40.0%
!! ATGACATGAGCACTGGATAT+GGG - chr7_1:77256732-77256751 Msa1039930:CDS 40.0%
! TACATAATGGAAGCTACCAG+GGG + chr7_1:77256871-77256890 None:intergenic 40.0%
! CTACATAATGGAAGCTACCA+GGG + chr7_1:77256872-77256891 None:intergenic 40.0%
! ACTACATAATGGAAGCTACC+AGG + chr7_1:77256873-77256892 None:intergenic 40.0%
CTGACAAAGAAACACTGAAG+TGG - chr7_1:77256932-77256951 Msa1039930:intron 40.0%
TGCCCAATGGAAAAACATGA+TGG + chr7_1:77256976-77256995 None:intergenic 40.0%
ATATGGTAACCGGTAACCAT+TGG - chr7_1:77257052-77257071 Msa1039930:five_prime_UTR 40.0%
!! AGGTGGTGTTGTTGTCACTT+GGG + chr7_1:77252377-77252396 None:intergenic 45.0%
!! AAGGTGGTGTTGTTGTCACT+TGG + chr7_1:77252378-77252397 None:intergenic 45.0%
TCAGAGCAAAGAGATCTGTG+GGG + chr7_1:77252422-77252441 None:intergenic 45.0%
!! TCTGTTTCTGACTGAGTGGA+AGG - chr7_1:77252625-77252644 Msa1039930:three_prime_UTR 45.0%
!! CTGTTTCTGACTGAGTGGAA+GGG - chr7_1:77252626-77252645 Msa1039930:three_prime_UTR 45.0%
GTGGAAGGGTTTCTCGTATA+AGG - chr7_1:77252640-77252659 Msa1039930:three_prime_UTR 45.0%
AACTGCAGAAGTTTCAAGGC+AGG - chr7_1:77253346-77253365 Msa1039930:CDS 45.0%
ACTGCAGAAGTTTCAAGGCA+GGG - chr7_1:77253347-77253366 Msa1039930:CDS 45.0%
AGAAGTTTCAAGGCAGGGAA+AGG - chr7_1:77253352-77253371 Msa1039930:CDS 45.0%
AAGCAGACAGCAAAAAGTGG+GGG + chr7_1:77253428-77253447 None:intergenic 45.0%
GGAGCAAGTCCGAGTAATAT+AGG - chr7_1:77253536-77253555 Msa1039930:intron 45.0%
! TTTGTAGTGATGAGGGGTGT+GGG - chr7_1:77253579-77253598 Msa1039930:intron 45.0%
!! CGGGTTAGTAGCTAGACTAA+TGG - chr7_1:77253613-77253632 Msa1039930:intron 45.0%
GAAGACTTCTCCGACTTAAG+TGG + chr7_1:77253779-77253798 None:intergenic 45.0%
TTGGGATGCCATGGAATCAA+GGG - chr7_1:77253799-77253818 Msa1039930:intron 45.0%
GAATGCAGCTCATGTAATGG+AGG - chr7_1:77253955-77253974 Msa1039930:CDS 45.0%
GCGGCTGCTAAGATAATTGA+TGG - chr7_1:77253977-77253996 Msa1039930:CDS 45.0%
CTATTCCTCGTATATGGCTG+AGG + chr7_1:77254007-77254026 None:intergenic 45.0%
!! TCGACTAGCTTTCTAGACAC+GGG + chr7_1:77254109-77254128 None:intergenic 45.0%
!! GTCGACTAGCTTTCTAGACA+CGG + chr7_1:77254110-77254129 None:intergenic 45.0%
CAAATTGTAAGCCTGGTGAG+AGG - chr7_1:77254149-77254168 Msa1039930:intron 45.0%
! GGCAATGCTCGGTTTGTATT+TGG + chr7_1:77254412-77254431 None:intergenic 45.0%
AAACCGTAATGGCAATGTGC+TGG - chr7_1:77254447-77254466 Msa1039930:CDS 45.0%
GTACCAGCACATTGCCATTA+CGG + chr7_1:77254453-77254472 None:intergenic 45.0%
!! AACTCGTGTTGTCGGCTTAT+TGG + chr7_1:77254536-77254555 None:intergenic 45.0%
AGCCTAAAAGGTCAAGCTCT+AGG - chr7_1:77254623-77254642 Msa1039930:CDS 45.0%
GCCTAAAAGGTCAAGCTCTA+GGG - chr7_1:77254624-77254643 Msa1039930:CDS 45.0%
! TCTGGTTTCCATCACTTGCT+CGG + chr7_1:77254911-77254930 None:intergenic 45.0%
! TCTGAGATTACGGTACACTG+AGG + chr7_1:77255081-77255100 None:intergenic 45.0%
TCAGTGTACCGTAATCTCAG+AGG - chr7_1:77255080-77255099 Msa1039930:CDS 45.0%
!! AGAAGGCTCCTCTGAGATTA+CGG + chr7_1:77255091-77255110 None:intergenic 45.0%
! GCAAGACAAAGCATCCAGTA+TGG - chr7_1:77255131-77255150 Msa1039930:CDS 45.0%
CTATCGCTGTTGTTCAAGTG+AGG - chr7_1:77255215-77255234 Msa1039930:CDS 45.0%
TAGACTCAGTAAATGGCGTG+TGG + chr7_1:77255442-77255461 None:intergenic 45.0%
GACAGTGAAGACAGTGCATA+TGG - chr7_1:77255671-77255690 Msa1039930:CDS 45.0%
CACATATTGCCCCATAGACA+TGG + chr7_1:77256291-77256310 None:intergenic 45.0%
CATGTCTATGGGGCAATATG+TGG - chr7_1:77256289-77256308 Msa1039930:intron 45.0%
GTGGCTGTCACACAAATATG+TGG - chr7_1:77256308-77256327 Msa1039930:intron 45.0%
GAGAACCATCAGAGTACATC+AGG - chr7_1:77256479-77256498 Msa1039930:intron 45.0%
GTTGCAAATCATGGCCTAGA+TGG - chr7_1:77256606-77256625 Msa1039930:intron 45.0%
!! TGAGCACTGGATATGGGAAA+TGG - chr7_1:77256738-77256757 Msa1039930:CDS 45.0%
TGCTTGTTTAACTAACCCCC+TGG - chr7_1:77256852-77256871 Msa1039930:intron 45.0%
! ACATAATGGAAGCTACCAGG+GGG + chr7_1:77256870-77256889 None:intergenic 45.0%
CAGTACAATTGTACAGGGGA+GGG + chr7_1:77257111-77257130 None:intergenic 45.0%
ACAGTACAATTGTACAGGGG+AGG + chr7_1:77257112-77257131 None:intergenic 45.0%
!!! TTTTATTTGATTTATTTTTT+TGG - chr7_1:77253472-77253491 Msa1039930:intron 5.0%
! AGAGAGAGAGAGAGGTGTGA+AGG + chr7_1:77252397-77252416 None:intergenic 50.0%
AGAGCAAAGAGATCTGTGGG+GGG + chr7_1:77252420-77252439 None:intergenic 50.0%
CAGAGCAAAGAGATCTGTGG+GGG + chr7_1:77252421-77252440 None:intergenic 50.0%
AGCAGACAGCAAAAAGTGGG+GGG + chr7_1:77253427-77253446 None:intergenic 50.0%
GTTTGTAGTGATGAGGGGTG+TGG - chr7_1:77253578-77253597 Msa1039930:intron 50.0%
TCTTTGCCAACTTCGGACGT+CGG - chr7_1:77253644-77253663 Msa1039930:intron 50.0%
GGAGCTGAATAGTGAAGCAC+CGG + chr7_1:77253678-77253697 None:intergenic 50.0%
CATGGATGACTATCGTCGTG+CGG - chr7_1:77253739-77253758 Msa1039930:intron 50.0%
GAAGTCTTCTTGGGATGCCA+TGG - chr7_1:77253790-77253809 Msa1039930:intron 50.0%
CTTGGGATGCCATGGAATCA+AGG - chr7_1:77253798-77253817 Msa1039930:intron 50.0%
! ATGGGTTTAGCCGACTTTGG+AGG + chr7_1:77253875-77253894 None:intergenic 50.0%
! GGAATGGGTTTAGCCGACTT+TGG + chr7_1:77253878-77253897 None:intergenic 50.0%
ACATGAGCTGCATTCTTCGG+CGG + chr7_1:77253950-77253969 None:intergenic 50.0%
! TGCAGCTCATGTAATGGAGG+CGG - chr7_1:77253958-77253977 Msa1039930:CDS 50.0%
! ACGTTTTCTGCGGCAATGCT+CGG + chr7_1:77254423-77254442 None:intergenic 50.0%
! CGGTTTGCACACGTTTTCTG+CGG + chr7_1:77254433-77254452 None:intergenic 50.0%
! GCCCTAGAGCTTGACCTTTT+AGG + chr7_1:77254628-77254647 None:intergenic 50.0%
TGGATGGGGGAAACTCCTTT+CGG + chr7_1:77254660-77254679 None:intergenic 50.0%
TGATCAGGACTTCTTGCCTC+AGG + chr7_1:77254730-77254749 None:intergenic 50.0%
TCGGGCACACTTCTCTTCAA+GGG + chr7_1:77254874-77254893 None:intergenic 50.0%
ATCTCAGAGGAGCCTTCTAC+TGG - chr7_1:77255093-77255112 Msa1039930:CDS 50.0%
GGTTGTCAGCATTCTGATGC+TGG - chr7_1:77255608-77255627 Msa1039930:CDS 50.0%
CAGGAAGAAACTGATCGGCA+CGG + chr7_1:77256153-77256172 None:intergenic 50.0%
!! AAACGGTGCTGCCTGAAAAC+AGG + chr7_1:77256172-77256191 None:intergenic 50.0%
GTCTGCAATGACATGAGCAC+TGG - chr7_1:77256725-77256744 Msa1039930:CDS 50.0%
AGCATTTGAAGAGGGGTCAG+AGG - chr7_1:77256778-77256797 Msa1039930:intron 50.0%
AAGAGGGGTCAGAGGTTGAA+GGG - chr7_1:77256786-77256805 Msa1039930:intron 50.0%
! GAGAGAGAGAGGTGTGAAGG+TGG + chr7_1:77252394-77252413 None:intergenic 55.0%
!! TGAGGGTGCTCTTCGTTCCA+TGG - chr7_1:77253721-77253740 Msa1039930:intron 55.0%
CGCACGACGATAGTCATCCA+TGG + chr7_1:77253741-77253760 None:intergenic 55.0%
GAAGCCCTCAGCCATATACG+AGG - chr7_1:77253999-77254018 Msa1039930:CDS 55.0%
!! GTTTCTGGCTCCTTGTGAGC+TGG + chr7_1:77254390-77254409 None:intergenic 55.0%
!! TGACAGCAGAGGTGTTCCTG+AGG - chr7_1:77254711-77254730 Msa1039930:CDS 55.0%
CTCGGGCACACTTCTCTTCA+AGG + chr7_1:77254875-77254894 None:intergenic 55.0%
TCGGCAGAGGATAGTGACTC+GGG + chr7_1:77254892-77254911 None:intergenic 55.0%
CTCGGCAGAGGATAGTGACT+CGG + chr7_1:77254893-77254912 None:intergenic 55.0%
ATCCTCTGCCGAGCAAGTGA+TGG - chr7_1:77254900-77254919 Msa1039930:CDS 55.0%
TTCCATCACTTGCTCGGCAG+AGG + chr7_1:77254905-77254924 None:intergenic 55.0%
GAAGAGGGGTCAGAGGTTGA+AGG - chr7_1:77256785-77256804 Msa1039930:intron 55.0%
AGAGGGGTCAGAGGTTGAAG+GGG - chr7_1:77256787-77256806 Msa1039930:intron 55.0%
GGGTGTGGGAGTAAAGCTCC+CGG - chr7_1:77253593-77253612 Msa1039930:intron 60.0%
GGTGTGGGAGTAAAGCTCCC+GGG - chr7_1:77253594-77253613 Msa1039930:intron 60.0%
AGCTCACCGACGTCCGAAGT+TGG + chr7_1:77253653-77253672 None:intergenic 60.0%
GTGGGGGGAGAGAGAGAGAG+AGG + chr7_1:77252405-77252424 None:intergenic 65.0%
TCGGACGTCGGTGAGCTCTC+CGG - chr7_1:77253656-77253675 Msa1039930:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 77252369 77257231 77252369 ID=Msa1039930;Name=Msa1039930
chr7_1 mRNA 77252369 77257231 77252369 ID=Msa1039930-mRNA-1;Parent=Msa1039930;Name=Msa1039930-mRNA-1;_AED=0.02;_eAED=0.02;_QI=312|1|1|1|0.8|0.83|6|369|911
chr7_1 exon 77252369 77253420 77252369 ID=Msa1039930-mRNA-1:exon:20268;Parent=Msa1039930-mRNA-1
chr7_1 exon 77253908 77254052 77253908 ID=Msa1039930-mRNA-1:exon:20267;Parent=Msa1039930-mRNA-1
chr7_1 exon 77254331 77256082 77254331 ID=Msa1039930-mRNA-1:exon:20266;Parent=Msa1039930-mRNA-1
chr7_1 exon 77256188 77256246 77256188 ID=Msa1039930-mRNA-1:exon:20265;Parent=Msa1039930-mRNA-1
chr7_1 exon 77256662 77256777 77256662 ID=Msa1039930-mRNA-1:exon:20264;Parent=Msa1039930-mRNA-1
chr7_1 exon 77256939 77257231 77256939 ID=Msa1039930-mRNA-1:exon:20263;Parent=Msa1039930-mRNA-1
chr7_1 five_prime_UTR 77256939 77257231 77256939 ID=Msa1039930-mRNA-1:five_prime_utr;Parent=Msa1039930-mRNA-1
chr7_1 five_prime_UTR 77256759 77256777 77256759 ID=Msa1039930-mRNA-1:five_prime_utr;Parent=Msa1039930-mRNA-1
chr7_1 CDS 77256662 77256758 77256662 ID=Msa1039930-mRNA-1:cds;Parent=Msa1039930-mRNA-1
chr7_1 CDS 77256188 77256246 77256188 ID=Msa1039930-mRNA-1:cds;Parent=Msa1039930-mRNA-1
chr7_1 CDS 77254331 77256082 77254331 ID=Msa1039930-mRNA-1:cds;Parent=Msa1039930-mRNA-1
chr7_1 CDS 77253908 77254052 77253908 ID=Msa1039930-mRNA-1:cds;Parent=Msa1039930-mRNA-1
chr7_1 CDS 77252738 77253420 77252738 ID=Msa1039930-mRNA-1:cds;Parent=Msa1039930-mRNA-1
chr7_1 three_prime_UTR 77252369 77252737 77252369 ID=Msa1039930-mRNA-1:three_prime_utr;Parent=Msa1039930-mRNA-1
Gene Sequence

>Msa1039930

ATGGAGAAAAAACGTTCAAAAGGAAGTTTCTTTAGCCTGTTTGATTGGAATTCTAAATCTCGTAAGAAGCTCGTTTGGAACAATCAAACCTTACCTGAAGTTTCAAGGCAGGGAAAGGAAAATCTAGAGACCTTACCGGAATCAAAGTTCTATAGGATAAAGGTGGATGAGAATGGAGCAAGTCCGAGTAATATAGGAAGTGGCGATTTTTCATCAGTTTGTAGTGATGAGGGGTGTGGGAGTAAAGCTCCCGGGTTAGTAGCTAGACTAATGGGTTTGGATTCTTTGCCAACTTCGGACGTCGGTGAGCTCTCCGGTGCTTCACTATTCAGCTCCAACTTTCATGCTTCTCATTATAATGAGGGTGCTCTTCGTTCCATGGATGACTATCGTCGTGCGGACTACTTAAACACACCACTTAAGTCGGAGAAGTCTTCTTGGGATGCCATGGAATCAAGGGCACATAAAATGGAAAACCAGTCACTCCAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCGGCTAAACCCATTCCAGTTACTCACAATAGGTTATTGTCTCCAATCAAGAGTAATGGTTTTCTGCCGCCGAAGAATGCAGCTCATGTAATGGAGGCGGCTGCTAAGATAATTGATGGAAGCCCTCAGCCATATACGAGGAATAGAGTTTTATCAGGCGGGTCTTCATCTGTTCCCTTGAGAATTCTTGATTTGAAAGAGAGATTGGAAGCTGCACAACATGCACCCGTGTCTAGAAAGCTAGTCGACCCAAACAATGCCAACTCTTCAAATTGTAAGCCTGGTGAGAGGAGTTCTAATTTTGACAAAGGTACATCATCATTCAAGGGTTCAAGTTCAAGTTCAAGAGATTCTGAAAAACGTAATTATTCTCATTTAACAAGTAAAGGAAAATCAGGTTCTCCTACAATGCAAGCCAAAAACAACGTTCAAAGCAGAGATACAATGGTTTCAAATGGAAATAGGAAATATATGAAGCAGAAAGAACCAAATGAGATTAAGTCAAACCAGCTCACAAGGAGCCAGAAACCAAATACAAACCGAGCATTGCCGCAGAAAACGTGTGCAAACCGTAATGGCAATGTGCTGGTACAGAATAATCAAAAGCAAAATAGTATGACTTCCAAAGGTAAATCAACTTCAAAAATAGATTCCAATAAGCCGACAACACGAGTTTCATCTTCAGAAAGTTCTACTGGAGTCAGAAAGGCAACAAACAAGGGTGCTACAAATGTCAATGTTCAGCCTAAAAGGTCAAGCTCTAGGGCAATCAATAACCGAAAGGAGTTTCCCCCATCCAAAACACATAATATTTCTCAAAAGAAAAAGTATGACAGCAGAGGTGTTCCTGAGGCAAGAAGTCCTGATCATGAAAGAAATGATTTTGAAAGCAAGTCCATAAAATGCAATTTTACAACTGATGGAAGTATTGATCAGAATGCATTTAACATGAATGAAAGCAATGACGTTGTTTCATTTACATTTACGTCTCCCTTGAAGAGAAGTGTGCCCGAGTCACTATCCTCTGCCGAGCAAGTGATGGAAACCAGAACTAGATTTGGTGTTGACTCTCTTGGGCATAATGATAATCTCCATCCCAAAAAATTATTGCTATCTCCGACACATATGATAGATAGTGATGCATTGAGTGTCTTGTTGGAGCAAAAGCTGCAAGAATTGACATCGAGACTTAACTTACCTCAGTGTACCGTAATCTCAGAGGAGCCTTCTACTGGTTTGAGATCTAGTTTGCAAGACAAAGCATCCAGTATGGTTAACACCAATACCATGGAACAAGATGAAATGTTCATTGATAATTTTAATAGCATGCATAACTATCGCTGTTGTTCAAGTGAGGATCCAGTGCTTAACATGAATCAGCAACTGCAGACATCAGAAGTAAGGGAAGATCATAGCTGTAGCAGCAACAATGAAAGTGGAAATGATCTAGGTTGTCAGCATTCTGATGCTGGTAAAAATTTTCAAGCTCCTTCTGTCAGTGAAAGTTACTTGGACAGTGAAGACAGTGCATATGGCAGCACCGTTTATTCTTCCATGCTAGATGAAGAAGTATCTAATATTTCCCAGATAAACGAATCTGATTCACTTGAAAATGAAGTGACATGGTCAGATCAAAGCTCTTCCATGTCTATGGGGCAATATGTGGCTGTCACACAAATATGTGGAACACCAAATATGGTAGATTTCAAAATATCAAGCGACATGGAGCTTGAATATGTACAGAAAATACTTGGCAACACAGAGTTTATGGCAGAAGAATTTGTCATGGGTCAAACTAATTCAGTCATAATGCCAAATCTCTTTGATCTGTTGGAGAACCATCAGAGTACATCAGGTACATCATATTGTGGAGAAGATCACTCTAAGCTTGAAAGGAAGGTTTTATTTGACTATGTGAGTGAGTGCCTAGAGTTGAGATGTGAAAAAGCTTTTGTTGGAAGTTGCAAATCATGGCCTAGATGGGTGACATCAATTCAAAGGAAGGACTTTTTGGCAGATGAGTTATACAGGGAGATGATGAGTTTTAGAAACTTGGAAGATGTAATGGTGGATGAGCTTGTCTGCAATGACATGAGCACTGGATATGGGAAATGGCTTGACTTTGACATTGAAGCATTTGAAGAGGGGTCAGAGGTTGAAGGGGACATACTAGACTGTTTGATTGATGAGATGGTTTCTGATTTGTTGCTTGTTTAA
Protein sequence

>Msa1039930

MEKKRSKGSFFSLFDWNSKSRKKLVWNNQTLPEVSRQGKENLETLPESKFYRIKVDENGASPSNIGSGDFSSVCSDEGCGSKAPGLVARLMGLDSLPTSDVGELSGASLFSSNFHASHYNEGALRSMDDYRRADYLNTPLKSEKSSWDAMESRAHKMENQSLQRFQTEMLPPKSAKPIPVTHNRLLSPIKSNGFLPPKNAAHVMEAAAKIIDGSPQPYTRNRVLSGGSSSVPLRILDLKERLEAAQHAPVSRKLVDPNNANSSNCKPGERSSNFDKGTSSFKGSSSSSRDSEKRNYSHLTSKGKSGSPTMQAKNNVQSRDTMVSNGNRKYMKQKEPNEIKSNQLTRSQKPNTNRALPQKTCANRNGNVLVQNNQKQNSMTSKGKSTSKIDSNKPTTRVSSSESSTGVRKATNKGATNVNVQPKRSSSRAINNRKEFPPSKTHNISQKKKYDSRGVPEARSPDHERNDFESKSIKCNFTTDGSIDQNAFNMNESNDVVSFTFTSPLKRSVPESLSSAEQVMETRTRFGVDSLGHNDNLHPKKLLLSPTHMIDSDALSVLLEQKLQELTSRLNLPQCTVISEEPSTGLRSSLQDKASSMVNTNTMEQDEMFIDNFNSMHNYRCCSSEDPVLNMNQQLQTSEVREDHSCSSNNESGNDLGCQHSDAGKNFQAPSVSESYLDSEDSAYGSTVYSSMLDEEVSNISQINESDSLENEVTWSDQSSSMSMGQYVAVTQICGTPNMVDFKISSDMELEYVQKILGNTEFMAEEFVMGQTNSVIMPNLFDLLENHQSTSGTSYCGEDHSKLERKVLFDYVSECLELRCEKAFVGSCKSWPRWVTSIQRKDFLADELYREMMSFRNLEDVMVDELVCNDMSTGYGKWLDFDIEAFEEGSEVEGDILDCLIDEMVSDLLLV*