Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621320 | XP_024631362.1 | 92.575 | 1037 | 48 | 2 | 1 | 1037 | 1 | 1008 | 0.0 | 1952 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621320 | sp|Q8RXD4|BRCA1_ARATH | 51.395 | 430 | 161 | 7 | 614 | 1035 | 551 | 940 | 3.48e-138 | 442 |
| Msa0621320 | sp|Q8RXD4|BRCA1_ARATH | 44.937 | 316 | 139 | 10 | 4 | 314 | 7 | 292 | 5.94e-64 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0050150 | Msa0621320 | 0.844005 | 9.881215e-59 | -8.615850e-47 |
| Msa0074360 | Msa0621320 | 0.816561 | 5.190808e-52 | -8.615850e-47 |
| Msa0077560 | Msa0621320 | 0.832920 | 7.175869e-56 | -8.615850e-47 |
| Msa0110200 | Msa0621320 | 0.810915 | 9.090540e-51 | -8.615850e-47 |
| Msa0607800 | Msa0621320 | 0.811761 | 5.956857e-51 | -8.615850e-47 |
| Msa0620510 | Msa0621320 | 0.838038 | 3.646286e-57 | -8.615850e-47 |
| Msa0621320 | Msa0641990 | 0.820153 | 7.973559e-53 | -8.615850e-47 |
| Msa0621320 | Msa0648040 | 0.804143 | 2.488428e-49 | -8.615850e-47 |
| Msa0621320 | Msa0707260 | 0.850996 | 1.182737e-60 | -8.615850e-47 |
| Msa0621320 | Msa0709440 | 0.826372 | 2.812567e-54 | -8.615850e-47 |
| Msa0621320 | Msa0717830 | 0.804053 | 2.597659e-49 | -8.615850e-47 |
| Msa0621320 | Msa0717900 | 0.800174 | 1.630865e-48 | -8.615850e-47 |
| Msa0621320 | Msa0754450 | 0.802465 | 5.538806e-49 | -8.615850e-47 |
| Msa0621320 | Msa0758590 | 0.804616 | 1.982963e-49 | -8.615850e-47 |
| Msa0621320 | Msa0850690 | 0.822932 | 1.818122e-53 | -8.615850e-47 |
| Msa0621320 | Msa0851300 | 0.821235 | 4.498456e-53 | -8.615850e-47 |
| Msa0621320 | Msa0861440 | 0.806867 | 6.677350e-50 | -8.615850e-47 |
| Msa0621320 | Msa0944010 | 0.826866 | 2.144795e-54 | -8.615850e-47 |
| Msa0621320 | Msa1000780 | 0.806480 | 8.060049e-50 | -8.615850e-47 |
| Msa0621320 | Msa1049910 | 0.807613 | 4.640258e-50 | -8.615850e-47 |
| Msa0621320 | Msa1074900 | 0.818663 | 1.742541e-52 | -8.615850e-47 |
| Msa0621320 | Msa1078830 | 0.819858 | 9.315347e-53 | -8.615850e-47 |
| Msa0621320 | Msa1084440 | 0.810168 | 1.318029e-50 | -8.615850e-47 |
| Msa0621320 | Msa1084530 | 0.818510 | 1.887763e-52 | -8.615850e-47 |
| Msa0621320 | Msa1125820 | 0.820099 | 8.203103e-53 | -8.615850e-47 |
| Msa0621320 | Msa1125990 | 0.820838 | 5.550136e-53 | -8.615850e-47 |
| Msa0621320 | Msa1162230 | 0.804574 | 2.023661e-49 | -8.615850e-47 |
| Msa0621320 | Msa1169660 | 0.832390 | 9.712900e-56 | -8.615850e-47 |
| Msa0621320 | Msa1171290 | 0.830846 | 2.332758e-55 | -8.615850e-47 |
| Msa0621320 | Msa1201170 | 0.806370 | 8.502029e-50 | -8.615850e-47 |
| Msa0621320 | Msa1215990 | 0.838764 | 2.369340e-57 | -8.615850e-47 |
| Msa0621320 | Msa1218820 | 0.818772 | 1.646395e-52 | -8.615850e-47 |
| Msa0621320 | Msa1299650 | 0.800252 | 1.572610e-48 | -8.615850e-47 |
| Msa0621320 | Msa1301830 | 0.801029 | 1.091543e-48 | -8.615850e-47 |
| Msa0621320 | Msa1333650 | 0.801057 | 1.077355e-48 | -8.615850e-47 |
| Msa0621320 | Msa1366150 | 0.813494 | 2.488383e-51 | -8.615850e-47 |
| Msa0621320 | Msa1387440 | 0.818404 | 1.994751e-52 | -8.615850e-47 |
| Msa0621320 | Msa1387500 | 0.802052 | 6.736554e-49 | -8.615850e-47 |
| Msa0621320 | Msa1391500 | 0.852223 | 5.314256e-61 | -8.615850e-47 |
| Msa0621320 | Msa1393560 | 0.838021 | 3.681726e-57 | -8.615850e-47 |
| Msa0621320 | Msa1397270 | 0.800791 | 1.220876e-48 | -8.615850e-47 |
| Msa0621320 | Msa1398810 | 0.829576 | 4.763774e-55 | -8.615850e-47 |
| Msa0621320 | Msa1399190 | 0.809248 | 2.078502e-50 | -8.615850e-47 |
| Msa0621320 | Msa1426320 | 0.827474 | 1.533494e-54 | -8.615850e-47 |
| Msa0142430 | Msa0621320 | 0.852293 | 5.076771e-61 | -8.615850e-47 |
| Msa0190730 | Msa0621320 | 0.835209 | 1.916574e-56 | -8.615850e-47 |
| Msa0194630 | Msa0621320 | 0.907678 | 3.908688e-81 | -8.615850e-47 |
| Msa0204950 | Msa0621320 | 0.815720 | 8.001746e-52 | -8.615850e-47 |
| Msa0233020 | Msa0621320 | 0.812186 | 4.813255e-51 | -8.615850e-47 |
| Msa0236820 | Msa0621320 | 0.959844 | 6.846571e-118 | -8.615850e-47 |
| Msa0368640 | Msa0621320 | 0.815136 | 1.078829e-51 | -8.615850e-47 |
| Msa0373500 | Msa0621320 | 0.828374 | 9.314924e-55 | -8.615850e-47 |
| Msa0380490 | Msa0621320 | 0.872203 | 3.809318e-67 | -8.615850e-47 |
| Msa0409830 | Msa0621320 | 0.814661 | 1.375254e-51 | -8.615850e-47 |
| Msa0414880 | Msa0621320 | 0.820594 | 6.317838e-53 | -8.615850e-47 |
| Msa0421130 | Msa0621320 | 0.800230 | 1.589134e-48 | -8.615850e-47 |
| Msa0430000 | Msa0621320 | 0.850146 | 2.050003e-60 | -8.615850e-47 |
| Msa0459740 | Msa0621320 | 0.811122 | 8.197437e-51 | -8.615850e-47 |
| Msa0466880 | Msa0621320 | 0.805847 | 1.095518e-49 | -8.615850e-47 |
| Msa0468620 | Msa0621320 | 0.838087 | 3.542332e-57 | -8.615850e-47 |
| Msa0468700 | Msa0621320 | 0.833106 | 6.451622e-56 | -8.615850e-47 |
| Msa0480280 | Msa0621320 | 0.805893 | 1.071427e-49 | -8.615850e-47 |
| Msa0481890 | Msa0621320 | 0.826168 | 3.146140e-54 | -8.615850e-47 |
| Msa0249850 | Msa0621320 | 0.802182 | 6.334166e-49 | -8.615850e-47 |
| Msa0269210 | Msa0621320 | 0.822662 | 2.101662e-53 | -8.615850e-47 |
| Msa0281470 | Msa0621320 | 0.822452 | 2.350907e-53 | -8.615850e-47 |
| Msa0314870 | Msa0621320 | 0.863388 | 2.579781e-64 | -8.615850e-47 |
| Msa0320600 | Msa0621320 | 0.820542 | 6.491361e-53 | -8.615850e-47 |
| Msa0500570 | Msa0621320 | 0.855699 | 5.292807e-62 | -8.615850e-47 |
| Msa0500650 | Msa0621320 | 0.817807 | 2.723063e-52 | -8.615850e-47 |
| Msa0502510 | Msa0621320 | 0.804793 | 1.821197e-49 | -8.615850e-47 |
| Msa0513640 | Msa0621320 | 0.842695 | 2.209335e-58 | -8.615850e-47 |
| Msa0514500 | Msa0621320 | 0.838678 | 2.493128e-57 | -8.615850e-47 |
| Msa0514580 | Msa0621320 | 0.823172 | 1.598404e-53 | -8.615850e-47 |
| Msa0521510 | Msa0621320 | 0.806676 | 7.329288e-50 | -8.615850e-47 |
| Msa0572830 | Msa0621320 | 0.808213 | 3.458791e-50 | -8.615850e-47 |
| Msa0584530 | Msa0621320 | 0.802191 | 6.305886e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621320 | MtrunA17_Chr2g0285611 | 92.478 | 1037 | 48 | 3 | 1 | 1037 | 1 | 1007 | 0.0 | 1946 |
| Msa0621320 | MtrunA17_Chr7g0261781 | 45.187 | 374 | 189 | 4 | 661 | 1033 | 325 | 683 | 3.08e-98 | 325 |
| Msa0621320 | MtrunA17_Chr7g0261781 | 40.476 | 84 | 50 | 0 | 1 | 84 | 20 | 103 | 1.02e-14 | 79.0 |
| Msa0621320 | MtrunA17_Chr2g0316851 | 30.769 | 130 | 80 | 3 | 686 | 814 | 425 | 545 | 3.84e-12 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621320 | AT4G21070.1 | 51.395 | 430 | 161 | 7 | 614 | 1035 | 551 | 940 | 3.54e-139 | 442 |
| Msa0621320 | AT4G21070.1 | 44.937 | 316 | 139 | 10 | 4 | 314 | 7 | 292 | 6.04e-65 | 238 |
| Msa0621320 | AT1G04020.1 | 45.067 | 375 | 196 | 2 | 661 | 1033 | 343 | 709 | 3.53e-103 | 340 |
| Msa0621320 | AT1G04020.2 | 45.067 | 375 | 196 | 2 | 661 | 1033 | 343 | 709 | 3.80e-103 | 340 |
| Msa0621320 | AT3G15120.2 | 32.432 | 111 | 72 | 3 | 689 | 798 | 561 | 669 | 5.18e-11 | 67.8 |
Find 221 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTAGGCAGGACCTTATT+AGG | 0.146681 | 4_2:-73374266 | Msa0621320:CDS |
| CAAAGTATTGCTGGGTATTC+TGG | 0.198978 | 4_2:-73372459 | Msa0621320:CDS |
| ATGGGACTTGAAAATAATTC+AGG | 0.235996 | 4_2:+73374616 | None:intergenic |
| CTGTGACAATGTATGACTTT+AGG | 0.249087 | 4_2:+73373373 | None:intergenic |
| CCTTCAAAATCAGCAGTTAC+AGG | 0.252043 | 4_2:+73373400 | None:intergenic |
| TGTTGACATCCACGGAATTA+AGG | 0.258257 | 4_2:-73372203 | Msa0621320:CDS |
| CCTTGCTCAATAAAGTTTAT+AGG | 0.266305 | 4_2:-73371280 | Msa0621320:exon |
| TTAGTCCTAGAGATGAATTC+AGG | 0.281555 | 4_2:+73373712 | None:intergenic |
| ATAGCATCAACAGATGAAAA+TGG | 0.283045 | 4_2:-73372500 | Msa0621320:CDS |
| TAGTAGGCAGTATTTCATTT+TGG | 0.284397 | 4_2:+73371487 | None:intergenic |
| CATCTTCAAAATACACATTT+GGG | 0.285159 | 4_2:+73373157 | None:intergenic |
| CAAACTACAGTGATTCTCTT+TGG | 0.291138 | 4_2:+73373618 | None:intergenic |
| GTTCTGAAAACTTGGGATTC+AGG | 0.296893 | 4_2:-73372536 | Msa0621320:CDS |
| GCATATATGTTTATAAATAA+AGG | 0.310476 | 4_2:+73371202 | None:intergenic |
| TCATCTTCAAAATACACATT+TGG | 0.311644 | 4_2:+73373156 | None:intergenic |
| TGTACAGTCTCCAATATATT+AGG | 0.313912 | 4_2:-73374072 | Msa0621320:CDS |
| AGAAGTTCTGATGATCTAAA+TGG | 0.315564 | 4_2:-73374330 | Msa0621320:CDS |
| CTGAGAAGATTGCTGGAAAA+AGG | 0.316352 | 4_2:-73373969 | Msa0621320:CDS |
| TTCCTGGACTTCTTTCTTGT+GGG | 0.316458 | 4_2:+73375382 | None:intergenic |
| TATCTTGTCATCCTTATAGA+TGG | 0.317902 | 4_2:-73373492 | Msa0621320:CDS |
| GCTTGTCTTAAGTTTCTTCC+TGG | 0.321042 | 4_2:+73375366 | None:intergenic |
| GCTTCTGGAATCAATTTATT+CGG | 0.326441 | 4_2:-73376073 | Msa0621320:CDS |
| ATAACACATTTCCTTAAAAC+TGG | 0.326826 | 4_2:+73373586 | None:intergenic |
| TCCTGAGTGTCGATGGGATA+TGG | 0.326844 | 4_2:-73372995 | Msa0621320:intron |
| TCCGAGTGATGAAATTAATA+TGG | 0.343977 | 4_2:-73374232 | Msa0621320:CDS |
| TCCGACTAAGAAAAGGGTTC+AGG | 0.345823 | 4_2:-73375275 | Msa0621320:CDS |
| GACAATTTAGTTCCCTAATA+AGG | 0.350465 | 4_2:+73374253 | None:intergenic |
| ATCCACCTGCTGTCTTAAAC+TGG | 0.352759 | 4_2:+73373840 | None:intergenic |
| CCTGTCTTCAAATTCCTTAG+TGG | 0.358316 | 4_2:+73375226 | None:intergenic |
| TGGCTACAAGTTCTATTTCA+TGG | 0.363507 | 4_2:-73371601 | Msa0621320:CDS |
| AAGGACTCTCAAAGTATTGC+TGG | 0.365029 | 4_2:-73372468 | Msa0621320:CDS |
| AGGGTTCTAACCTGGTGATT+TGG | 0.365213 | 4_2:+73376030 | None:intergenic |
| AAGAGAAATGTAAGGGCAAT+TGG | 0.367512 | 4_2:-73375154 | Msa0621320:CDS |
| CTTGCAGAAAAGATGATTGC+AGG | 0.373026 | 4_2:+73376395 | None:intergenic |
| TGAATTTGAAAGAGTGTTGA+AGG | 0.375830 | 4_2:-73372564 | Msa0621320:CDS |
| TCCTGCTAAATCCAATCCTT+TGG | 0.379223 | 4_2:-73371424 | Msa0621320:CDS |
| AATTCATCGAAATTCGAAAT+GGG | 0.385285 | 4_2:-73376594 | Msa0621320:exon |
| ATGAAAATGGGGCATGTAGA+AGG | 0.386673 | 4_2:-73372487 | Msa0621320:CDS |
| CTTTATGCGATTCGAAATAC+AGG | 0.389854 | 4_2:-73373458 | Msa0621320:CDS |
| CAATTCATCGAAATTCGAAA+TGG | 0.391585 | 4_2:-73376595 | Msa0621320:exon |
| AGGTGAAAGAACCATTCTTT+TGG | 0.396721 | 4_2:-73375114 | Msa0621320:CDS |
| GCTCAAGACTATAGATTATG+AGG | 0.398847 | 4_2:+73371448 | None:intergenic |
| CTTCCTGGACTTCTTTCTTG+TGG | 0.400892 | 4_2:+73375381 | None:intergenic |
| CAAGACCTTGTGATTGCTGC+TGG | 0.401161 | 4_2:-73371546 | Msa0621320:CDS |
| GGCTAGTAGTGTCATGTTTG+CGG | 0.404271 | 4_2:+73372755 | None:intergenic |
| TAGCATCAACAGATGAAAAT+GGG | 0.405758 | 4_2:-73372499 | Msa0621320:CDS |
| GCGATGTGATGCAGAGGCTT+TGG | 0.407498 | 4_2:-73371376 | Msa0621320:CDS |
| TTCAGCCAATTGATTGCCAT+TGG | 0.412349 | 4_2:+73374383 | None:intergenic |
| CAATGTTCTGAGAAGATTGC+TGG | 0.414944 | 4_2:-73373976 | Msa0621320:CDS |
| CATCTGTTGATGCTATTACA+TGG | 0.415551 | 4_2:+73372507 | None:intergenic |
| ATCTAGGCAGGACCTTATTA+GGG | 0.417382 | 4_2:-73374265 | Msa0621320:CDS |
| GACTATAGATTATGAGGGTT+CGG | 0.418186 | 4_2:+73371454 | None:intergenic |
| TAAGTTCCAGTCCATCTATA+AGG | 0.419080 | 4_2:+73373481 | None:intergenic |
| TGCATTGAAGTTAAATCCTC+AGG | 0.419419 | 4_2:+73373898 | None:intergenic |
| TTGGAGACTGTACAAGCAAT+TGG | 0.423260 | 4_2:+73374081 | None:intergenic |
| AAAAGGCAGGTGAGAAGATC+TGG | 0.425108 | 4_2:-73373952 | Msa0621320:CDS |
| TGGATTCTGAATTCAATTGC+TGG | 0.428413 | 4_2:-73371318 | Msa0621320:CDS |
| TGAAGAAAATATAGAGGAAT+GGG | 0.429275 | 4_2:-73374466 | Msa0621320:CDS |
| CGATTCGAAATACAGGCTTC+TGG | 0.434144 | 4_2:-73373451 | Msa0621320:CDS |
| CCTCTGCATCACATCGCCTT+TGG | 0.437327 | 4_2:+73371382 | None:intergenic |
| TTTCATCATCAGCGTCTTTG+AGG | 0.440713 | 4_2:+73374996 | None:intergenic |
| CAAAGGTTGCAAGCAATACA+TGG | 0.444277 | 4_2:-73371338 | Msa0621320:CDS |
| AGTCATTGAGGAGCAATCAT+TGG | 0.446833 | 4_2:-73374190 | Msa0621320:CDS |
| TTCATGTTCCTTGTGCTAAG+TGG | 0.449596 | 4_2:-73373020 | Msa0621320:CDS |
| AGCAAGGAGGGAGCATGTAG+AGG | 0.450172 | 4_2:+73372847 | None:intergenic |
| TCATCAAAATAGTGCACCAT+TGG | 0.451528 | 4_2:+73373427 | None:intergenic |
| TAGTGAAAGAAGAAAGAAGA+AGG | 0.453835 | 4_2:+73376630 | None:intergenic |
| AAAGACTAGCAGGAAAAGTC+TGG | 0.455639 | 4_2:-73375323 | Msa0621320:CDS |
| GAGAACTCAAATGTCCAATC+TGG | 0.455932 | 4_2:-73376551 | Msa0621320:intron |
| CCTGACATCATTACCTTGCT+TGG | 0.458906 | 4_2:+73373657 | None:intergenic |
| TCATAACGCTCTTCATCAAC+AGG | 0.458952 | 4_2:+73372232 | None:intergenic |
| TCCAAAGGATTGGATTTAGC+AGG | 0.460839 | 4_2:+73371423 | None:intergenic |
| AACCATGAGCAATCTGACTT+TGG | 0.463621 | 4_2:+73372734 | None:intergenic |
| AGGTTACAGTTCTGAAAACT+TGG | 0.463872 | 4_2:-73372544 | Msa0621320:CDS |
| TTGCTGCCGTGTGAAAGTTC+AGG | 0.465616 | 4_2:-73372829 | Msa0621320:CDS |
| CCTTGCTTGGTACTTTCAGT+AGG | 0.466860 | 4_2:+73373670 | None:intergenic |
| ATTAAGGATGGTCCCCGTCT+TGG | 0.467573 | 4_2:-73372187 | Msa0621320:CDS |
| CCTGGTGATTTGGTAGCAGT+TGG | 0.470823 | 4_2:+73376040 | None:intergenic |
| ATCTAGCAAGCTCTTTGCAT+TGG | 0.471544 | 4_2:+73373872 | None:intergenic |
| GAATCCCAATGGCAATCAAT+TGG | 0.471548 | 4_2:-73374388 | Msa0621320:CDS |
| TGCAGATAGCCCTTGTATGA+AGG | 0.471841 | 4_2:+73371567 | None:intergenic |
| GCCATTGGGATTCTCAAAGT+TGG | 0.471965 | 4_2:+73374398 | None:intergenic |
| TAAATCCAATCCTTTGGAAA+AGG | 0.473536 | 4_2:-73371418 | Msa0621320:CDS |
| TGCTCCTCACATTGACAACT+TGG | 0.474339 | 4_2:-73376122 | Msa0621320:CDS |
| CACCCACAAGAAAGAAGTCC+AGG | 0.474478 | 4_2:-73375384 | Msa0621320:CDS |
| GTTCGGTGTTGATGCATAGT+AGG | 0.476812 | 4_2:+73371471 | None:intergenic |
| TGAAATTGAAGAAAATATAG+AGG | 0.481187 | 4_2:-73374472 | Msa0621320:CDS |
| TCCTCTCTTAACCAAAAGAA+TGG | 0.482001 | 4_2:+73375103 | None:intergenic |
| GAATTGAATTGATACCAGAT+TGG | 0.482751 | 4_2:+73376537 | None:intergenic |
| GGTGGAGGTGATGCTGAGTC+TGG | 0.483277 | 4_2:-73375457 | Msa0621320:CDS |
| TTCATCCAGTTTAAGACAGC+AGG | 0.485285 | 4_2:-73373845 | Msa0621320:CDS |
| TAAGACAAGCACGGTAAGCT+TGG | 0.485777 | 4_2:-73375353 | Msa0621320:CDS |
| CTTCAATTAAGAGAAATGTA+AGG | 0.486241 | 4_2:-73375162 | Msa0621320:CDS |
| TTGAAGAAAATATAGAGGAA+TGG | 0.486332 | 4_2:-73374467 | Msa0621320:CDS |
| AGAAGTCTACAAAGAGAAGC+AGG | 0.488220 | 4_2:-73374302 | Msa0621320:CDS |
| ATCTGTTGATGCTATTACAT+GGG | 0.489052 | 4_2:+73372508 | None:intergenic |
| TCAGCCAATTGATTGCCATT+GGG | 0.491155 | 4_2:+73374384 | None:intergenic |
| TGGAGAAGCTAAAGACTAGC+AGG | 0.491806 | 4_2:-73375333 | Msa0621320:CDS |
| AGAGAATCACTGTAGTTTGA+CGG | 0.491941 | 4_2:-73373614 | Msa0621320:CDS |
| GACGAGGATCAAATTATTGA+AGG | 0.493589 | 4_2:-73375049 | Msa0621320:CDS |
| GGTTCCGCAAGACATTCTTT+CGG | 0.495492 | 4_2:-73375254 | Msa0621320:CDS |
| TCACTGAATGAAGGAGGAAC+TGG | 0.495681 | 4_2:+73375019 | None:intergenic |
| TGCTCTTAATCTTCCAAGAC+GGG | 0.497751 | 4_2:+73372174 | None:intergenic |
| CTGTTCAGCTCTGTCCGTGC+AGG | 0.497892 | 4_2:-73372689 | Msa0621320:CDS |
| GAGAGGAGCAAGATGGTGAA+AGG | 0.500805 | 4_2:-73375087 | Msa0621320:CDS |
| AAGATCTGGAAAACAAAGGC+TGG | 0.501403 | 4_2:-73373938 | Msa0621320:CDS |
| GGCTACAAGTTCTATTTCAT+GGG | 0.501495 | 4_2:-73371600 | Msa0621320:CDS |
| CCTATAAACTTTATTGAGCA+AGG | 0.503689 | 4_2:+73371280 | None:intergenic |
| GAGTCTGGTGAGAAGGGAGC+TGG | 0.504548 | 4_2:-73375442 | Msa0621320:CDS |
| CTGCATAGAAAACCAGTGTC+AGG | 0.507664 | 4_2:-73371513 | Msa0621320:CDS |
| CCAAGCAAGGTAATGATGTC+AGG | 0.508294 | 4_2:-73373657 | Msa0621320:CDS |
| TGTCATCCTTATAGATGGAC+TGG | 0.513451 | 4_2:-73373487 | Msa0621320:CDS |
| TCTTTGGATGAATCATTCAA+AGG | 0.514742 | 4_2:+73373634 | None:intergenic |
| TGCATGTTAGGTGCAGGTTG+AGG | 0.517829 | 4_2:-73374502 | Msa0621320:intron |
| GGCAAGGCCTACTTGTTCAA+AGG | 0.518034 | 4_2:-73371355 | Msa0621320:CDS |
| GAAAATAATTCAGGGGAGCA+TGG | 0.519169 | 4_2:+73374625 | None:intergenic |
| AGTGGACTCCTGAGTGTCGA+TGG | 0.519457 | 4_2:-73373002 | Msa0621320:CDS |
| TGGGACTTGAAAATAATTCA+GGG | 0.521669 | 4_2:+73374617 | None:intergenic |
| TGAGGTACCTCGACGAGTGA+AGG | 0.524772 | 4_2:+73376240 | None:intergenic |
| AGTGAAAGAAGAAAGAAGAA+GGG | 0.525910 | 4_2:+73376631 | None:intergenic |
| CACATTGGTACTCTTTGACA+TGG | 0.526913 | 4_2:+73373563 | None:intergenic |
| TAGTCCTAGAGATGAATTCA+GGG | 0.527752 | 4_2:+73373713 | None:intergenic |
| GACCTTGTGATTGCTGCTGG+AGG | 0.529685 | 4_2:-73371543 | Msa0621320:CDS |
| AGCTCTGTCCGTGCAGGAGA+AGG | 0.531310 | 4_2:-73372683 | Msa0621320:intron |
| CTATGCCTTGCGTTACAGAA+AGG | 0.534499 | 4_2:-73373762 | Msa0621320:CDS |
| AAGTTGTCAATGTGAGGAGC+AGG | 0.540154 | 4_2:+73376124 | None:intergenic |
| CTTTCACACGGCAGCAAGGA+GGG | 0.540628 | 4_2:+73372835 | None:intergenic |
| GCAGATAGCCCTTGTATGAA+GGG | 0.554517 | 4_2:+73371568 | None:intergenic |
| CTGCTCTTAATCTTCCAAGA+CGG | 0.555478 | 4_2:+73372173 | None:intergenic |
| TCCATATTAATTTCATCACT+CGG | 0.555531 | 4_2:+73374231 | None:intergenic |
| GTCACAGGAATTGCACAGAA+TGG | 0.555665 | 4_2:-73373357 | Msa0621320:intron |
| CTCTTCCTTTCTGTAACGCA+AGG | 0.556323 | 4_2:+73373757 | None:intergenic |
| TCTTTGAGGTCACTGAATGA+AGG | 0.558765 | 4_2:+73375010 | None:intergenic |
| TGGTTAAGAGAGGAGCAAGA+TGG | 0.558959 | 4_2:-73375094 | Msa0621320:CDS |
| GCAAGGAGGGAGCATGTAGA+GGG | 0.559253 | 4_2:+73372848 | None:intergenic |
| TGGGTATTCTGGAGGGAAAG+TGG | 0.560625 | 4_2:-73372448 | Msa0621320:CDS |
| TCCTTCAAAACAAACTCTAT+CGG | 0.562574 | 4_2:-73374972 | Msa0621320:intron |
| ATCCAGTTTAAGACAGCAGG+TGG | 0.562777 | 4_2:-73373842 | Msa0621320:CDS |
| AAGCAGAAATAAGTAGAAGC+CGG | 0.563138 | 4_2:-73373116 | Msa0621320:CDS |
| TTTCCCCTGAATTCATCTCT+AGG | 0.563996 | 4_2:-73373717 | Msa0621320:CDS |
| CTTGCAACCTTTGAACAAGT+AGG | 0.566870 | 4_2:+73371348 | None:intergenic |
| TTCAAGTCCCATCAAAACGC+AGG | 0.566895 | 4_2:-73374605 | Msa0621320:intron |
| TTCAATTAAGAGAAATGTAA+GGG | 0.567148 | 4_2:-73375161 | Msa0621320:CDS |
| AGCCAAAGTCAGATTGCTCA+TGG | 0.567852 | 4_2:-73372736 | Msa0621320:CDS |
| CTATCAAATAAATCAACAGA+TGG | 0.571152 | 4_2:+73374673 | None:intergenic |
| TTATATTACCTTCTCCTGCA+CGG | 0.571440 | 4_2:+73372675 | None:intergenic |
| CTAATTTCAGAGGACATGAC+TGG | 0.572021 | 4_2:+73374351 | None:intergenic |
| GAGGTACCTCGACGAGTGAA+GGG | 0.572483 | 4_2:+73376241 | None:intergenic |
| ATTCATCGAAATTCGAAATG+GGG | 0.572510 | 4_2:-73376593 | Msa0621320:exon |
| TGATGCTGAGTCTGGTGAGA+AGG | 0.573479 | 4_2:-73375449 | Msa0621320:CDS |
| GGTTACAGTTCTGAAAACTT+GGG | 0.574253 | 4_2:-73372543 | Msa0621320:CDS |
| CTAAAGTCATACATTGTCAC+AGG | 0.574406 | 4_2:-73373372 | Msa0621320:CDS |
| GGACTTAAAGGAGCTGCACT+CGG | 0.574494 | 4_2:-73373072 | Msa0621320:CDS |
| GAGTTCAAAACAATGGTGCT+AGG | 0.577153 | 4_2:-73374050 | Msa0621320:CDS |
| GCTTTGAGAAAAGTTGTCGC+AGG | 0.577590 | 4_2:-73373047 | Msa0621320:CDS |
| GTGGACTCCTGAGTGTCGAT+GGG | 0.580430 | 4_2:-73373001 | Msa0621320:CDS |
| TTCATCGAAATTCGAAATGG+GGG | 0.580695 | 4_2:-73376592 | Msa0621320:exon |
| ACCATATCCCATCGACACTC+AGG | 0.582483 | 4_2:+73372994 | None:intergenic |
| TTCTTTCGGAAACTCCACTA+AGG | 0.583320 | 4_2:-73375240 | Msa0621320:CDS |
| ATCAGAACTTCTAATTTCAG+AGG | 0.583325 | 4_2:+73374341 | None:intergenic |
| AATACAGGCTTCTGGTCCAA+TGG | 0.586341 | 4_2:-73373443 | Msa0621320:CDS |
| AGGACTCTCAAAGTATTGCT+GGG | 0.586594 | 4_2:-73372467 | Msa0621320:CDS |
| AAAACAAAGGCTGGATGTTG+TGG | 0.586762 | 4_2:-73373929 | Msa0621320:CDS |
| TATAACATCAAAAGTCATTG+AGG | 0.587526 | 4_2:-73374202 | Msa0621320:CDS |
| CCACTAAGGAATTTGAAGAC+AGG | 0.591544 | 4_2:-73375226 | Msa0621320:CDS |
| TATTACTCAAGTTAACATAG+AGG | 0.597075 | 4_2:-73375197 | Msa0621320:CDS |
| AATGAAGGAGGAACTGGTGT+TGG | 0.597110 | 4_2:+73375025 | None:intergenic |
| GAAGTTAATGTTGACATCCA+CGG | 0.601444 | 4_2:-73372211 | Msa0621320:CDS |
| AAGATTAAGAGCAGTGAACA+AGG | 0.602728 | 4_2:-73372164 | Msa0621320:intron |
| ATTGAAGTTAAATCCTCAGG+TGG | 0.604316 | 4_2:+73373901 | None:intergenic |
| CCAACTGCTACCAAATCACC+AGG | 0.605074 | 4_2:-73376040 | Msa0621320:intron |
| TCTGGTGAGAAGGGAGCTGG+AGG | 0.606167 | 4_2:-73375439 | Msa0621320:CDS |
| TCCCTCCAGCAGCAATCACA+AGG | 0.608614 | 4_2:+73371541 | None:intergenic |
| AACACTGATTTGGAATCATG+TGG | 0.609865 | 4_2:+73371247 | None:intergenic |
| ATTACTCAAGTTAACATAGA+GGG | 0.610507 | 4_2:-73375196 | Msa0621320:CDS |
| CTCAAGACTATAGATTATGA+GGG | 0.610814 | 4_2:+73371449 | None:intergenic |
| AGTATTGCTGGGTATTCTGG+AGG | 0.610995 | 4_2:-73372456 | Msa0621320:CDS |
| TCGGAAAAGAAGGCTTTGCA+CGG | 0.612335 | 4_2:+73375293 | None:intergenic |
| ACCTTGTGATTGCTGCTGGA+GGG | 0.612846 | 4_2:-73371542 | Msa0621320:CDS |
| GATGCTGAGTCTGGTGAGAA+GGG | 0.621769 | 4_2:-73375448 | Msa0621320:CDS |
| GAGACTGTACAAGCAATTGG+AGG | 0.622478 | 4_2:+73374084 | None:intergenic |
| GACATCCACGGAATTAAGGA+TGG | 0.624235 | 4_2:-73372199 | Msa0621320:CDS |
| CCTACTGAAAGTACCAAGCA+AGG | 0.625040 | 4_2:-73373670 | Msa0621320:CDS |
| GTCTACAAAGAGAAGCAGGA+AGG | 0.627465 | 4_2:-73374298 | Msa0621320:CDS |
| AGCATCAACAGATGAAAATG+GGG | 0.627540 | 4_2:-73372498 | Msa0621320:CDS |
| CACTCATGAAAATCATGCCG+AGG | 0.633459 | 4_2:-73375416 | Msa0621320:CDS |
| AAAATTCCCTTCACTCGTCG+AGG | 0.635135 | 4_2:-73376247 | Msa0621320:intron |
| ACCAACTTTGAGAATCCCAA+TGG | 0.637438 | 4_2:-73374399 | Msa0621320:CDS |
| AGAAAATATAGAGGAATGGG+TGG | 0.638006 | 4_2:-73374463 | Msa0621320:CDS |
| CCAAAGGCGATGTGATGCAG+AGG | 0.638380 | 4_2:-73371382 | Msa0621320:CDS |
| GGGGACCATCCTTAATTCCG+TGG | 0.639704 | 4_2:+73372194 | None:intergenic |
| ATCTTCAAAATACACATTTG+GGG | 0.641039 | 4_2:+73373158 | None:intergenic |
| TCATGAAAATCATGCCGAGG+AGG | 0.644659 | 4_2:-73375413 | Msa0621320:CDS |
| TCTCTCGTCAGAAGAATCAG+AGG | 0.646696 | 4_2:-73373533 | Msa0621320:CDS |
| GTATTGCTGGGTATTCTGGA+GGG | 0.647435 | 4_2:-73372455 | Msa0621320:CDS |
| CTAAGGAATTTGAAGACAGG+AGG | 0.648127 | 4_2:-73375223 | Msa0621320:CDS |
| GTGATGCAGAGGCTTTGGCA+AGG | 0.648646 | 4_2:-73371371 | Msa0621320:CDS |
| AGTCCTAGAGATGAATTCAG+GGG | 0.651447 | 4_2:+73373714 | None:intergenic |
| TGAACTTTCACACGGCAGCA+AGG | 0.654872 | 4_2:+73372831 | None:intergenic |
| TTGAGGTCACTGAATGAAGG+AGG | 0.657965 | 4_2:+73375013 | None:intergenic |
| AAGCTTGCATGAAAGAAACA+AGG | 0.660020 | 4_2:-73372255 | Msa0621320:CDS |
| GATGATGAAATGCAAGGTGG+AGG | 0.660597 | 4_2:-73375472 | Msa0621320:CDS |
| TGAGAAGATCTGGAAAACAA+AGG | 0.666192 | 4_2:-73373942 | Msa0621320:CDS |
| ATATTAGGAGTTCAAAACAA+TGG | 0.668480 | 4_2:-73374057 | Msa0621320:CDS |
| TCAGGAGTCCACTTAGCACA+AGG | 0.674168 | 4_2:+73373012 | None:intergenic |
| ACTTTCACACGGCAGCAAGG+AGG | 0.676599 | 4_2:+73372834 | None:intergenic |
| GTTACAGATGATGAAATGCA+AGG | 0.682855 | 4_2:-73375478 | Msa0621320:CDS |
| TGGGATCCTGAACTTTCACA+CGG | 0.683715 | 4_2:+73372823 | None:intergenic |
| TTGAAGTTAAATCCTCAGGT+GGG | 0.684063 | 4_2:+73373902 | None:intergenic |
| GTGACCAAGTTGTCAATGTG+AGG | 0.685620 | 4_2:+73376118 | None:intergenic |
| GAAGAAACTTAAGACAAGCA+CGG | 0.689445 | 4_2:-73375362 | Msa0621320:CDS |
| ACGAGAGACAGAAAGCACAT+TGG | 0.691830 | 4_2:+73373548 | None:intergenic |
| ATTTCAGAGGACATGACTGG+TGG | 0.697088 | 4_2:+73374354 | None:intergenic |
| GGGACTTGAAAATAATTCAG+GGG | 0.697974 | 4_2:+73374618 | None:intergenic |
| TGTTGTGGATGACCCACCTG+AGG | 0.704326 | 4_2:-73373914 | Msa0621320:CDS |
| GTTTCCGAAAGAATGTCTTG+CGG | 0.714815 | 4_2:+73375250 | None:intergenic |
| AGAAGCCGGAGAATCAAATG+TGG | 0.719929 | 4_2:-73373102 | Msa0621320:CDS |
| GTTAAGTGCACAAACTGACG+AGG | 0.720885 | 4_2:-73375065 | Msa0621320:CDS |
| GCTCTTAATCTTCCAAGACG+GGG | 0.721448 | 4_2:+73372175 | None:intergenic |
| ATTGCAGGTGAGTGAAACTG+CGG | 0.761313 | 4_2:+73376410 | None:intergenic |
| ACAGATGATGAAATGCAAGG+TGG | 0.783752 | 4_2:-73375475 | Msa0621320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATAATCATAATTAATTA+GGG | + | chr4_2:73371702-73371721 | None:intergenic | 10.0% |
| !! | AATCATAATCATAATTAATT+AGG | + | chr4_2:73371703-73371722 | None:intergenic | 10.0% |
| !! | AAAACAAAAATTATAAAAGA+GGG | + | chr4_2:73371855-73371874 | None:intergenic | 10.0% |
| !! | TTAATAAAACTTCAATAAAT+AGG | + | chr4_2:73373339-73373358 | None:intergenic | 10.0% |
| !! | CAAAACAAAAATTATAAAAG+AGG | + | chr4_2:73371856-73371875 | None:intergenic | 15.0% |
| !!! | AAAGTTGTATATTTTTATTG+TGG | - | chr4_2:73373055-73373074 | Msa0621320:CDS | 15.0% |
| !! | AACAATTATTAATCATAACA+TGG | + | chr4_2:73375744-73375763 | None:intergenic | 15.0% |
| !! | AAATTTGATGCAAATATATA+TGG | - | chr4_2:73375985-73376004 | Msa0621320:intron | 15.0% |
| !! | AATATCAAATGTATAACAAA+TGG | + | chr4_2:73376119-73376138 | None:intergenic | 15.0% |
| !!! | ATTTGTTATACATTTGATAT+TGG | - | chr4_2:73376118-73376137 | Msa0621320:CDS | 15.0% |
| !! | GCATATATGTTTATAAATAA+AGG | + | chr4_2:73376664-73376683 | None:intergenic | 15.0% |
| !! | TCATACACAAATGATAATTT+GGG | + | chr4_2:73371653-73371672 | None:intergenic | 20.0% |
| !! | ATCATACACAAATGATAATT+TGG | + | chr4_2:73371654-73371673 | None:intergenic | 20.0% |
| !! | ATGATTATGATTAATTTCAG+AGG | - | chr4_2:73371711-73371730 | Msa0621320:intron | 20.0% |
| !!! | ATGTTTATATAGTGTTTTAG+AGG | + | chr4_2:73372035-73372054 | None:intergenic | 20.0% |
| !!! | GAATTTTAACCAATAAAAGA+GGG | + | chr4_2:73372059-73372078 | None:intergenic | 20.0% |
| !!! | TGAATTTTAACCAATAAAAG+AGG | + | chr4_2:73372060-73372079 | None:intergenic | 20.0% |
| !!! | TTATTGGTTAAAATTCATGT+CGG | - | chr4_2:73372063-73372082 | Msa0621320:intron | 20.0% |
| !! | AAGTTTCTCAATTAAAAAAG+AGG | + | chr4_2:73372346-73372365 | None:intergenic | 20.0% |
| !! | TTCAATTAAGAGAAATGTAA+GGG | - | chr4_2:73372702-73372721 | Msa0621320:CDS | 20.0% |
| !! | TTTATTGTGGAATTGAAATT+TGG | - | chr4_2:73373068-73373087 | Msa0621320:CDS | 20.0% |
| !! | TGAAATTGAAGAAAATATAG+AGG | - | chr4_2:73373391-73373410 | Msa0621320:CDS | 20.0% |
| !! | AACTCGATTAAATCAATTAT+TGG | + | chr4_2:73374616-73374635 | None:intergenic | 20.0% |
| !! | AAATTACTAAATAGATATCG+AGG | + | chr4_2:73375217-73375236 | None:intergenic | 20.0% |
| !!! | TTTTTCGTTGTTTTTTATTC+TGG | - | chr4_2:73375555-73375574 | Msa0621320:intron | 20.0% |
| !! | TTATTGAAACCAAAACAAAA+AGG | + | chr4_2:73375837-73375856 | None:intergenic | 20.0% |
| !! | GGATAAAGTTTATGAAAATA+AGG | + | chr4_2:73375865-73375884 | None:intergenic | 20.0% |
| !! | ACATTAATTCACAAACTTAT+TGG | - | chr4_2:73376192-73376211 | Msa0621320:intron | 20.0% |
| !!! | GTTTTAATGAAGTTTTCGAT+TGG | + | chr4_2:73371213-73371232 | None:intergenic | 25.0% |
| ! | AATTCATCGAAATTCGAAAT+GGG | - | chr4_2:73371269-73371288 | Msa0621320:three_prime_UTR | 25.0% |
| ! | CTAGCATAATTCATATAACA+TGG | + | chr4_2:73372004-73372023 | None:intergenic | 25.0% |
| !! | ATAAACATACCCTCTTTTAT+TGG | - | chr4_2:73372047-73372066 | Msa0621320:intron | 25.0% |
| ! | TATTACTCAAGTTAACATAG+AGG | - | chr4_2:73372666-73372685 | Msa0621320:intron | 25.0% |
| ! | ATTACTCAAGTTAACATAGA+GGG | - | chr4_2:73372667-73372686 | Msa0621320:intron | 25.0% |
| ! | CTTCAATTAAGAGAAATGTA+AGG | - | chr4_2:73372701-73372720 | Msa0621320:CDS | 25.0% |
| ! | ATGGCTTATGATAAACTAAT+GGG | - | chr4_2:73372921-73372940 | Msa0621320:intron | 25.0% |
| !! | AATCCATATTTGAAGTTGAA+TGG | + | chr4_2:73373030-73373049 | None:intergenic | 25.0% |
| !!! | TTTTGTTGTGATTATTCTGT+AGG | - | chr4_2:73373150-73373169 | Msa0621320:CDS | 25.0% |
| ! | CTATCAAATAAATCAACAGA+TGG | + | chr4_2:73373193-73373212 | None:intergenic | 25.0% |
| !!! | GTTTTATTAAGTTGCATGTT+AGG | - | chr4_2:73373349-73373368 | Msa0621320:intron | 25.0% |
| ! | TTGAAGAAAATATAGAGGAA+TGG | - | chr4_2:73373396-73373415 | Msa0621320:CDS | 25.0% |
| ! | TGAAGAAAATATAGAGGAAT+GGG | - | chr4_2:73373397-73373416 | Msa0621320:CDS | 25.0% |
| ! | TCCATATTAATTTCATCACT+CGG | + | chr4_2:73373635-73373654 | None:intergenic | 25.0% |
| ! | TATAACATCAAAAGTCATTG+AGG | - | chr4_2:73373661-73373680 | Msa0621320:CDS | 25.0% |
| ! | ACCTGAAAAAGTCTAATAAA+AGG | - | chr4_2:73373717-73373736 | Msa0621320:CDS | 25.0% |
| ! | CCTGAAAAAGTCTAATAAAA+GGG | - | chr4_2:73373718-73373737 | Msa0621320:CDS | 25.0% |
| ! | CTGAAAAAGTCTAATAAAAG+GGG | - | chr4_2:73373719-73373738 | Msa0621320:CDS | 25.0% |
| ! | TGAAAAAGTCTAATAAAAGG+GGG | - | chr4_2:73373720-73373739 | Msa0621320:CDS | 25.0% |
| !!! | GTTTTGAACTCCTAATATAT+TGG | + | chr4_2:73373804-73373823 | None:intergenic | 25.0% |
| ! | ATATTAGGAGTTCAAAACAA+TGG | - | chr4_2:73373806-73373825 | Msa0621320:CDS | 25.0% |
| ! | ATAACACATTTCCTTAAAAC+TGG | + | chr4_2:73374280-73374299 | None:intergenic | 25.0% |
| ! | ATATATGGTTATTTGAAGGA+TGG | + | chr4_2:73374588-73374607 | None:intergenic | 25.0% |
| ! | AGCTATATATGGTTATTTGA+AGG | + | chr4_2:73374592-73374611 | None:intergenic | 25.0% |
| !! | TGTTTTATACATATGCATCA+GGG | - | chr4_2:73374682-73374701 | Msa0621320:CDS | 25.0% |
| ! | ATCTTCAAAATACACATTTG+GGG | + | chr4_2:73374708-73374727 | None:intergenic | 25.0% |
| ! | CATCTTCAAAATACACATTT+GGG | + | chr4_2:73374709-73374728 | None:intergenic | 25.0% |
| ! | TCATCTTCAAAATACACATT+TGG | + | chr4_2:73374710-73374729 | None:intergenic | 25.0% |
| !!! | ACAAAGTTTTAAATGTGGTT+TGG | + | chr4_2:73374906-73374925 | None:intergenic | 25.0% |
| !! | AAACCACATTTAAAACTTTG+TGG | - | chr4_2:73374905-73374924 | Msa0621320:intron | 25.0% |
| !!! | TAACCACAAAGTTTTAAATG+TGG | + | chr4_2:73374911-73374930 | None:intergenic | 25.0% |
| !!! | ATGTTTTTTGCTATTGTGTT+GGG | + | chr4_2:73375062-73375081 | None:intergenic | 25.0% |
| !!! | TATGTTTTTTGCTATTGTGT+TGG | + | chr4_2:73375063-73375082 | None:intergenic | 25.0% |
| !! | ATTTAGATACTTGTTTCTCA+CGG | - | chr4_2:73375483-73375502 | Msa0621320:CDS | 25.0% |
| !!! | TTCTTTATGAAAGTACTTTG+AGG | - | chr4_2:73375765-73375784 | Msa0621320:intron | 25.0% |
| !!! | TCTTTATGAAAGTACTTTGA+GGG | - | chr4_2:73375766-73375785 | Msa0621320:intron | 25.0% |
| ! | AAGTTTATGAAAATAAGGCA+CGG | + | chr4_2:73375860-73375879 | None:intergenic | 25.0% |
| ! | TTTGATGCAAATATATATGG+AGG | - | chr4_2:73375988-73376007 | Msa0621320:intron | 25.0% |
| !! | TAACAAATGGTCAAAAGTAT+TGG | + | chr4_2:73376106-73376125 | None:intergenic | 25.0% |
| ! | TTAATTCACAAACTTATTGG+TGG | - | chr4_2:73376195-73376214 | Msa0621320:intron | 25.0% |
| !! | ATAAAGGAAAAACACTGATT+TGG | + | chr4_2:73376629-73376648 | None:intergenic | 25.0% |
| ! | AAGGAAAAACACTGAAATAA+AGG | + | chr4_2:73376645-73376664 | None:intergenic | 25.0% |
| AGTGAAAGAAGAAAGAAGAA+GGG | + | chr4_2:73371235-73371254 | None:intergenic | 30.0% | |
| TAGTGAAAGAAGAAAGAAGA+AGG | + | chr4_2:73371236-73371255 | None:intergenic | 30.0% | |
| CAATTCATCGAAATTCGAAA+TGG | - | chr4_2:73371268-73371287 | Msa0621320:three_prime_UTR | 30.0% | |
| ATTCATCGAAATTCGAAATG+GGG | - | chr4_2:73371270-73371289 | Msa0621320:three_prime_UTR | 30.0% | |
| GAATTGAATTGATACCAGAT+TGG | + | chr4_2:73371329-73371348 | None:intergenic | 30.0% | |
| TTAGGGTTTGATTCAGATTA+GGG | + | chr4_2:73371685-73371704 | None:intergenic | 30.0% | |
| ATTAGGGTTTGATTCAGATT+AGG | + | chr4_2:73371686-73371705 | None:intergenic | 30.0% | |
| !! | GCTTCTGGAATCAATTTATT+CGG | - | chr4_2:73371790-73371809 | Msa0621320:intron | 30.0% |
| AGGGACCTATATAAATTAGT+GGG | - | chr4_2:73372102-73372121 | Msa0621320:intron | 30.0% | |
| TTGACCCCACTAATTTATAT+AGG | + | chr4_2:73372110-73372129 | None:intergenic | 30.0% | |
| AGAAACTTCGTATACTAACT+AGG | - | chr4_2:73372358-73372377 | Msa0621320:intron | 30.0% | |
| ! | TTCTTTTCCGACTAAGAAAA+GGG | - | chr4_2:73372582-73372601 | Msa0621320:intron | 30.0% |
| TCCTTCAAAACAAACTCTAT+CGG | - | chr4_2:73372891-73372910 | Msa0621320:intron | 30.0% | |
| GATGGCTTATGATAAACTAA+TGG | - | chr4_2:73372920-73372939 | Msa0621320:intron | 30.0% | |
| AAGCCATTCAACTTCAAATA+TGG | - | chr4_2:73373024-73373043 | Msa0621320:CDS | 30.0% | |
| AGATTGAATTGTTTACGCTT+TGG | - | chr4_2:73373110-73373129 | Msa0621320:CDS | 30.0% | |
| !!! | TTGATAGCGAGTTTTTTGAA+TGG | - | chr4_2:73373206-73373225 | Msa0621320:intron | 30.0% |
| TGGGACTTGAAAATAATTCA+GGG | + | chr4_2:73373249-73373268 | None:intergenic | 30.0% | |
| ATGGGACTTGAAAATAATTC+AGG | + | chr4_2:73373250-73373269 | None:intergenic | 30.0% | |
| ! | GTAATGAGAATTATTTTCGC+TGG | - | chr4_2:73373280-73373299 | Msa0621320:intron | 30.0% |
| ATCAGAACTTCTAATTTCAG+AGG | + | chr4_2:73373525-73373544 | None:intergenic | 30.0% | |
| ! | AGAAGTTCTGATGATCTAAA+TGG | - | chr4_2:73373533-73373552 | Msa0621320:CDS | 30.0% |
| ! | GACAATTTAGTTCCCTAATA+AGG | + | chr4_2:73373613-73373632 | None:intergenic | 30.0% |
| TCCGAGTGATGAAATTAATA+TGG | - | chr4_2:73373631-73373650 | Msa0621320:CDS | 30.0% | |
| !! | CCCTTTTATTAGACTTTTTC+AGG | + | chr4_2:73373721-73373740 | None:intergenic | 30.0% |
| TGTACAGTCTCCAATATATT+AGG | - | chr4_2:73373791-73373810 | Msa0621320:CDS | 30.0% | |
| !! | TTCATCTCTAGGACTAAAAA+TGG | - | chr4_2:73374157-73374176 | Msa0621320:CDS | 30.0% |
| TCTTTGGATGAATCATTCAA+AGG | + | chr4_2:73374232-73374251 | None:intergenic | 30.0% | |
| TATCTTGTCATCCTTATAGA+TGG | - | chr4_2:73374371-73374390 | Msa0621320:CDS | 30.0% | |
| CAATTATTGGCAGCTATATA+TGG | + | chr4_2:73374603-73374622 | None:intergenic | 30.0% | |
| ! | GTGTTTTATACATATGCATC+AGG | - | chr4_2:73374681-73374700 | Msa0621320:CDS | 30.0% |
| AAAAACCACATTTGATTCTC+CGG | + | chr4_2:73374769-73374788 | None:intergenic | 30.0% | |
| ! | AGAATCAAATGTGGTTTTTG+TGG | - | chr4_2:73374770-73374789 | Msa0621320:intron | 30.0% |
| CAAAAAACATACAGCTAAGA+AGG | - | chr4_2:73375072-73375091 | Msa0621320:CDS | 30.0% | |
| !! | TTCTTGGTTTTTGTAACTGT+AGG | - | chr4_2:73375266-73375285 | Msa0621320:CDS | 30.0% |
| !! | TGAATTTGAAAGAGTGTTGA+AGG | - | chr4_2:73375299-73375318 | Msa0621320:CDS | 30.0% |
| ATCTGTTGATGCTATTACAT+GGG | + | chr4_2:73375358-73375377 | None:intergenic | 30.0% | |
| ATAGCATCAACAGATGAAAA+TGG | - | chr4_2:73375363-73375382 | Msa0621320:CDS | 30.0% | |
| TAGCATCAACAGATGAAAAT+GGG | - | chr4_2:73375364-73375383 | Msa0621320:CDS | 30.0% | |
| TTACTATGACCTTAAAGTAG+TGG | + | chr4_2:73375511-73375530 | None:intergenic | 30.0% | |
| !!! | GTTGTTTTTTATTCTGGTGT+TGG | - | chr4_2:73375561-73375580 | Msa0621320:intron | 30.0% |
| !!! | TTTTTTATTCTGGTGTTGGT+TGG | - | chr4_2:73375565-73375584 | Msa0621320:intron | 30.0% |
| GGCAATACATGATAGAAATT+TGG | + | chr4_2:73375886-73375905 | None:intergenic | 30.0% | |
| TACTATGACTTCATCAAAGT+AGG | - | chr4_2:73376017-73376036 | Msa0621320:intron | 30.0% | |
| ACTATGACTTCATCAAAGTA+GGG | - | chr4_2:73376018-73376037 | Msa0621320:intron | 30.0% | |
| ! | GATTTTATCCCTTCATACAA+GGG | - | chr4_2:73376287-73376306 | Msa0621320:CDS | 30.0% |
| ! | TAGTAGGCAGTATTTCATTT+TGG | + | chr4_2:73376379-73376398 | None:intergenic | 30.0% |
| CTCAAGACTATAGATTATGA+GGG | + | chr4_2:73376417-73376436 | None:intergenic | 30.0% | |
| ! | TAAATCCAATCCTTTGGAAA+AGG | - | chr4_2:73376445-73376464 | Msa0621320:intron | 30.0% |
| ! | AAAATTGCATCCTTTTCCAA+AGG | + | chr4_2:73376458-73376477 | None:intergenic | 30.0% |
| CCTATAAACTTTATTGAGCA+AGG | + | chr4_2:73376586-73376605 | None:intergenic | 30.0% | |
| CCTTGCTCAATAAAGTTTAT+AGG | - | chr4_2:73376583-73376602 | Msa0621320:exon | 30.0% | |
| TTCATCGAAATTCGAAATGG+GGG | - | chr4_2:73371271-73371290 | Msa0621320:exon | 35.0% | |
| AATGGGGGATCTTGAAAAAA+TGG | - | chr4_2:73371286-73371305 | Msa0621320:exon | 35.0% | |
| ATGGGGGATCTTGAAAAAAT+GGG | - | chr4_2:73371287-73371306 | Msa0621320:exon | 35.0% | |
| ! | GTGAAGGGAATTTTACAAAC+AGG | + | chr4_2:73371610-73371629 | None:intergenic | 35.0% |
| AATGATAATTTGGGAGAGTG+AGG | + | chr4_2:73371644-73371663 | None:intergenic | 35.0% | |
| GGTCACAATCTACAAAAACA+TGG | - | chr4_2:73371762-73371781 | Msa0621320:intron | 35.0% | |
| ! | TATAAAAGAGGGTTCTAACC+TGG | + | chr4_2:73371844-73371863 | None:intergenic | 35.0% |
| CATATAACATGGTCACAAGA+AGG | + | chr4_2:73371993-73372012 | None:intergenic | 35.0% | |
| TAGGTCCCTCATATATTTAG+CGG | + | chr4_2:73372091-73372110 | None:intergenic | 35.0% | |
| GAGGGACCTATATAAATTAG+TGG | - | chr4_2:73372101-73372120 | Msa0621320:intron | 35.0% | |
| GGGACCTATATAAATTAGTG+GGG | - | chr4_2:73372103-73372122 | Msa0621320:intron | 35.0% | |
| TGTGAATTTCAAGCAATCAG+AGG | - | chr4_2:73372130-73372149 | Msa0621320:intron | 35.0% | |
| GTGAATTTCAAGCAATCAGA+GGG | - | chr4_2:73372131-73372150 | Msa0621320:intron | 35.0% | |
| CTATAGCAACGCATTATCTA+CGG | + | chr4_2:73372227-73372246 | None:intergenic | 35.0% | |
| ATATGCTTACAGTGTGTCAT+CGG | - | chr4_2:73372262-73372281 | Msa0621320:CDS | 35.0% | |
| GTTACAGATGATGAAATGCA+AGG | - | chr4_2:73372385-73372404 | Msa0621320:intron | 35.0% | |
| GAAGAAACTTAAGACAAGCA+CGG | - | chr4_2:73372501-73372520 | Msa0621320:CDS | 35.0% | |
| ! | CTTTTCTTAGTCGGAAAAGA+AGG | + | chr4_2:73372583-73372602 | None:intergenic | 35.0% |
| ! | CTTCTTTTCCGACTAAGAAA+AGG | - | chr4_2:73372581-73372600 | Msa0621320:intron | 35.0% |
| AAGAGAAATGTAAGGGCAAT+TGG | - | chr4_2:73372709-73372728 | Msa0621320:CDS | 35.0% | |
| GGCAATTGGAAGTGAAAAAA+GGG | - | chr4_2:73372723-73372742 | Msa0621320:CDS | 35.0% | |
| ! | AGGTGAAAGAACCATTCTTT+TGG | - | chr4_2:73372749-73372768 | Msa0621320:CDS | 35.0% |
| !! | ACCATTCTTTTGGTTAAGAG+AGG | - | chr4_2:73372759-73372778 | Msa0621320:CDS | 35.0% |
| TCCTCTCTTAACCAAAAGAA+TGG | + | chr4_2:73372763-73372782 | None:intergenic | 35.0% | |
| GACGAGGATCAAATTATTGA+AGG | - | chr4_2:73372814-73372833 | Msa0621320:CDS | 35.0% | |
| !!! | ACCGATAGAGTTTGTTTTGA+AGG | + | chr4_2:73372895-73372914 | None:intergenic | 35.0% |
| AAACTCTATCGGTAAGTAGA+TGG | - | chr4_2:73372902-73372921 | Msa0621320:intron | 35.0% | |
| AAGTTGAATGGCTTCAAACA+TGG | + | chr4_2:73373018-73373037 | None:intergenic | 35.0% | |
| TGTGATTATTCTGTAGGATG+AGG | - | chr4_2:73373156-73373175 | Msa0621320:CDS | 35.0% | |
| GGGACTTGAAAATAATTCAG+GGG | + | chr4_2:73373248-73373267 | None:intergenic | 35.0% | |
| AGAAAATATAGAGGAATGGG+TGG | - | chr4_2:73373400-73373419 | Msa0621320:CDS | 35.0% | |
| TGAGAAGATCTGGAAAACAA+AGG | - | chr4_2:73373921-73373940 | Msa0621320:CDS | 35.0% | |
| TTGAAGTTAAATCCTCAGGT+GGG | + | chr4_2:73373964-73373983 | None:intergenic | 35.0% | |
| ATTGAAGTTAAATCCTCAGG+TGG | + | chr4_2:73373965-73373984 | None:intergenic | 35.0% | |
| TGCATTGAAGTTAAATCCTC+AGG | + | chr4_2:73373968-73373987 | None:intergenic | 35.0% | |
| TAGTCCTAGAGATGAATTCA+GGG | + | chr4_2:73374153-73374172 | None:intergenic | 35.0% | |
| TTAGTCCTAGAGATGAATTC+AGG | + | chr4_2:73374154-73374173 | None:intergenic | 35.0% | |
| CAAACTACAGTGATTCTCTT+TGG | + | chr4_2:73374248-73374267 | None:intergenic | 35.0% | |
| AGAGAATCACTGTAGTTTGA+CGG | - | chr4_2:73374249-73374268 | Msa0621320:CDS | 35.0% | |
| TAAGTTCCAGTCCATCTATA+AGG | + | chr4_2:73374385-73374404 | None:intergenic | 35.0% | |
| CTTTATGCGATTCGAAATAC+AGG | - | chr4_2:73374405-73374424 | Msa0621320:CDS | 35.0% | |
| TCATCAAAATAGTGCACCAT+TGG | + | chr4_2:73374439-73374458 | None:intergenic | 35.0% | |
| CTGTGACAATGTATGACTTT+AGG | + | chr4_2:73374493-73374512 | None:intergenic | 35.0% | |
| CTAAAGTCATACATTGTCAC+AGG | - | chr4_2:73374491-73374510 | Msa0621320:CDS | 35.0% | |
| AAGCAGAAATAAGTAGAAGC+CGG | - | chr4_2:73374747-73374766 | Msa0621320:intron | 35.0% | |
| ! | TGTGGTTTTTGTGGACTTAA+AGG | - | chr4_2:73374779-73374798 | Msa0621320:intron | 35.0% |
| ! | AGATAGTACTGTTTCTCTTC+AGG | - | chr4_2:73374973-73374992 | Msa0621320:CDS | 35.0% |
| TTATATTACCTTCTCCTGCA+CGG | + | chr4_2:73375191-73375210 | None:intergenic | 35.0% | |
| ! | GTTTTTGTAACTGTAGGAAG+TGG | - | chr4_2:73375272-73375291 | Msa0621320:CDS | 35.0% |
| !! | AGGTTACAGTTCTGAAAACT+TGG | - | chr4_2:73375319-73375338 | Msa0621320:CDS | 35.0% |
| !! | GGTTACAGTTCTGAAAACTT+GGG | - | chr4_2:73375320-73375339 | Msa0621320:CDS | 35.0% |
| CATCTGTTGATGCTATTACA+TGG | + | chr4_2:73375359-73375378 | None:intergenic | 35.0% | |
| AGCATCAACAGATGAAAATG+GGG | - | chr4_2:73375365-73375384 | Msa0621320:CDS | 35.0% | |
| AAGCTTGCATGAAAGAAACA+AGG | - | chr4_2:73375608-73375627 | Msa0621320:intron | 35.0% | |
| GAAGTTAATGTTGACATCCA+CGG | - | chr4_2:73375652-73375671 | Msa0621320:intron | 35.0% | |
| AAGATTAAGAGCAGTGAACA+AGG | - | chr4_2:73375699-73375718 | Msa0621320:intron | 35.0% | |
| !! | CTGTCAGAACCTTTTTGTTT+TGG | - | chr4_2:73375825-73375844 | Msa0621320:intron | 35.0% |
| AGCTTCTTGTACATCTTGAA+TGG | + | chr4_2:73375907-73375926 | None:intergenic | 35.0% | |
| TTGTAGCCATCAAAAAGCTT+TGG | + | chr4_2:73376251-73376270 | None:intergenic | 35.0% | |
| TGGCTACAAGTTCTATTTCA+TGG | - | chr4_2:73376262-73376281 | Msa0621320:CDS | 35.0% | |
| GGCTACAAGTTCTATTTCAT+GGG | - | chr4_2:73376263-73376282 | Msa0621320:CDS | 35.0% | |
| ! | CGATTTTATCCCTTCATACA+AGG | - | chr4_2:73376286-73376305 | Msa0621320:CDS | 35.0% |
| GACTATAGATTATGAGGGTT+CGG | + | chr4_2:73376412-73376431 | None:intergenic | 35.0% | |
| GCTCAAGACTATAGATTATG+AGG | + | chr4_2:73376418-73376437 | None:intergenic | 35.0% | |
| !!! | AGGATGCAATTTTTAGCCAA+AGG | - | chr4_2:73376465-73376484 | Msa0621320:intron | 35.0% |
| TGGATTCTGAATTCAATTGC+TGG | - | chr4_2:73376545-73376564 | Msa0621320:intron | 35.0% | |
| !! | AACACTGATTTGGAATCATG+TGG | + | chr4_2:73376619-73376638 | None:intergenic | 35.0% |
| GAGAACTCAAATGTCCAATC+TGG | - | chr4_2:73371312-73371331 | Msa0621320:CDS | 40.0% | |
| CTGCACAATGAAGCAAGAAA+AGG | + | chr4_2:73371416-73371435 | None:intergenic | 40.0% | |
| TCTTGCTTCATTGTGCAGTT+TGG | - | chr4_2:73371418-73371437 | Msa0621320:CDS | 40.0% | |
| CTTGCTTCATTGTGCAGTTT+GGG | - | chr4_2:73371419-73371438 | Msa0621320:CDS | 40.0% | |
| CTTGCAGAAAAGATGATTGC+AGG | + | chr4_2:73371471-73371490 | None:intergenic | 40.0% | |
| AAAAACATGGAAGCTGCTTC+TGG | - | chr4_2:73371775-73371794 | Msa0621320:intron | 40.0% | |
| AGGTCCCTCATATATTTAGC+GGG | + | chr4_2:73372090-73372109 | None:intergenic | 40.0% | |
| !! | GAGGGTATGTGTTGATTAGA+TGG | - | chr4_2:73372149-73372168 | Msa0621320:intron | 40.0% |
| !! | GGTATGTGTTGATTAGATGG+CGG | - | chr4_2:73372152-73372171 | Msa0621320:intron | 40.0% |
| AACCTCTGATTGGTATACCA+AGG | + | chr4_2:73372187-73372206 | None:intergenic | 40.0% | |
| ATCTACAGACAACCTCTGAT+TGG | + | chr4_2:73372197-73372216 | None:intergenic | 40.0% | |
| GAGGTTGTCTGTAGATTAGA+TGG | - | chr4_2:73372201-73372220 | Msa0621320:CDS | 40.0% | |
| ACAGATGATGAAATGCAAGG+TGG | - | chr4_2:73372388-73372407 | Msa0621320:intron | 40.0% | |
| TTCCTGGACTTCTTTCTTGT+GGG | + | chr4_2:73372484-73372503 | None:intergenic | 40.0% | |
| GCTTGTCTTAAGTTTCTTCC+TGG | + | chr4_2:73372500-73372519 | None:intergenic | 40.0% | |
| AAAGACTAGCAGGAAAAGTC+TGG | - | chr4_2:73372540-73372559 | Msa0621320:CDS | 40.0% | |
| ! | ACCTGAACCCTTTTCTTAGT+CGG | + | chr4_2:73372592-73372611 | None:intergenic | 40.0% |
| GTTTCCGAAAGAATGTCTTG+CGG | + | chr4_2:73372616-73372635 | None:intergenic | 40.0% | |
| TTCTTTCGGAAACTCCACTA+AGG | - | chr4_2:73372623-73372642 | Msa0621320:intron | 40.0% | |
| CCTGTCTTCAAATTCCTTAG+TGG | + | chr4_2:73372640-73372659 | None:intergenic | 40.0% | |
| CCACTAAGGAATTTGAAGAC+AGG | - | chr4_2:73372637-73372656 | Msa0621320:intron | 40.0% | |
| CTAAGGAATTTGAAGACAGG+AGG | - | chr4_2:73372640-73372659 | Msa0621320:intron | 40.0% | |
| GGGCAATTGGAAGTGAAAAA+AGG | - | chr4_2:73372722-73372741 | Msa0621320:CDS | 40.0% | |
| TGGAAGTGAAAAAAGGGATC+AGG | - | chr4_2:73372729-73372748 | Msa0621320:CDS | 40.0% | |
| !! | TCTTTGAGGTCACTGAATGA+AGG | + | chr4_2:73372856-73372875 | None:intergenic | 40.0% |
| TTTCATCATCAGCGTCTTTG+AGG | + | chr4_2:73372870-73372889 | None:intergenic | 40.0% | |
| GGGTTATGCGAATAGTCATT+TGG | - | chr4_2:73372941-73372960 | Msa0621320:intron | 40.0% | |
| GAAAATAATTCAGGGGAGCA+TGG | + | chr4_2:73373241-73373260 | None:intergenic | 40.0% | |
| !! | CTCATTACCTGCGTTTTGAT+GGG | + | chr4_2:73373268-73373287 | None:intergenic | 40.0% |
| ! | TCTCATTACCTGCGTTTTGA+TGG | + | chr4_2:73373269-73373288 | None:intergenic | 40.0% |
| ! | TTAAGTTGCATGTTAGGTGC+AGG | - | chr4_2:73373355-73373374 | Msa0621320:intron | 40.0% |
| ! | ACCAACTTTGAGAATCCCAA+TGG | - | chr4_2:73373464-73373483 | Msa0621320:CDS | 40.0% |
| GAATCCCAATGGCAATCAAT+TGG | - | chr4_2:73373475-73373494 | Msa0621320:CDS | 40.0% | |
| TCAGCCAATTGATTGCCATT+GGG | + | chr4_2:73373482-73373501 | None:intergenic | 40.0% | |
| TTCAGCCAATTGATTGCCAT+TGG | + | chr4_2:73373483-73373502 | None:intergenic | 40.0% | |
| CTAATTTCAGAGGACATGAC+TGG | + | chr4_2:73373515-73373534 | None:intergenic | 40.0% | |
| AGAAGTCTACAAAGAGAAGC+AGG | - | chr4_2:73373561-73373580 | Msa0621320:CDS | 40.0% | |
| GGAAGGCTAGAGAAAAATCT+AGG | - | chr4_2:73373582-73373601 | Msa0621320:CDS | 40.0% | |
| AATCTAGGCAGGACCTTATT+AGG | - | chr4_2:73373597-73373616 | Msa0621320:CDS | 40.0% | |
| ATCTAGGCAGGACCTTATTA+GGG | - | chr4_2:73373598-73373617 | Msa0621320:CDS | 40.0% | |
| AGTCATTGAGGAGCAATCAT+TGG | - | chr4_2:73373673-73373692 | Msa0621320:CDS | 40.0% | |
| GTCTAATAAAAGGGGGAAGA+AGG | - | chr4_2:73373727-73373746 | Msa0621320:CDS | 40.0% | |
| TTGGAGACTGTACAAGCAAT+TGG | + | chr4_2:73373785-73373804 | None:intergenic | 40.0% | |
| GAGTTCAAAACAATGGTGCT+AGG | - | chr4_2:73373813-73373832 | Msa0621320:CDS | 40.0% | |
| !! | CAATGTTCTGAGAAGATTGC+TGG | - | chr4_2:73373887-73373906 | Msa0621320:CDS | 40.0% |
| CTGAGAAGATTGCTGGAAAA+AGG | - | chr4_2:73373894-73373913 | Msa0621320:CDS | 40.0% | |
| AAGATCTGGAAAACAAAGGC+TGG | - | chr4_2:73373925-73373944 | Msa0621320:CDS | 40.0% | |
| AAAACAAAGGCTGGATGTTG+TGG | - | chr4_2:73373934-73373953 | Msa0621320:CDS | 40.0% | |
| ATCTAGCAAGCTCTTTGCAT+TGG | + | chr4_2:73373994-73374013 | None:intergenic | 40.0% | |
| ! | TTCATCCAGTTTAAGACAGC+AGG | - | chr4_2:73374018-73374037 | Msa0621320:CDS | 40.0% |
| ! | AACGCAAGGCATAGATTTTC+TGG | + | chr4_2:73374095-73374114 | None:intergenic | 40.0% |
| TTTCCCCTGAATTCATCTCT+AGG | - | chr4_2:73374146-73374165 | Msa0621320:CDS | 40.0% | |
| AGTCCTAGAGATGAATTCAG+GGG | + | chr4_2:73374152-73374171 | None:intergenic | 40.0% | |
| !! | CTCTAGGACTAAAAATGGTG+AGG | - | chr4_2:73374162-73374181 | Msa0621320:CDS | 40.0% |
| CACATTGGTACTCTTTGACA+TGG | + | chr4_2:73374303-73374322 | None:intergenic | 40.0% | |
| TGTCATCCTTATAGATGGAC+TGG | - | chr4_2:73374376-73374395 | Msa0621320:CDS | 40.0% | |
| CCTTCAAAATCAGCAGTTAC+AGG | + | chr4_2:73374466-73374485 | None:intergenic | 40.0% | |
| !!! | CCTGTAACTGCTGATTTTGA+AGG | - | chr4_2:73374463-73374482 | Msa0621320:CDS | 40.0% |
| TTCATGTTCCTTGTGCTAAG+TGG | - | chr4_2:73374843-73374862 | Msa0621320:intron | 40.0% | |
| AACCATGAGCAATCTGACTT+TGG | + | chr4_2:73375132-73375151 | None:intergenic | 40.0% | |
| !! | GTTCTGAAAACTTGGGATTC+AGG | - | chr4_2:73375327-73375346 | Msa0621320:CDS | 40.0% |
| ATGAAAATGGGGCATGTAGA+AGG | - | chr4_2:73375376-73375395 | Msa0621320:CDS | 40.0% | |
| !! | AAGGACTCTCAAAGTATTGC+TGG | - | chr4_2:73375395-73375414 | Msa0621320:CDS | 40.0% |
| !! | AGGACTCTCAAAGTATTGCT+GGG | - | chr4_2:73375396-73375415 | Msa0621320:CDS | 40.0% |
| !! | CAAAGTATTGCTGGGTATTC+TGG | - | chr4_2:73375404-73375423 | Msa0621320:CDS | 40.0% |
| !!! | TTGGTTGGTTTTTGCTAAGC+AGG | - | chr4_2:73375580-73375599 | Msa0621320:intron | 40.0% |
| !!! | TGGTTGGTTTTTGCTAAGCA+GGG | - | chr4_2:73375581-73375600 | Msa0621320:intron | 40.0% |
| TCATAACGCTCTTCATCAAC+AGG | + | chr4_2:73375634-73375653 | None:intergenic | 40.0% | |
| TGTTGACATCCACGGAATTA+AGG | - | chr4_2:73375660-73375679 | Msa0621320:intron | 40.0% | |
| TGCTCTTAATCTTCCAAGAC+GGG | + | chr4_2:73375692-73375711 | None:intergenic | 40.0% | |
| CTGCTCTTAATCTTCCAAGA+CGG | + | chr4_2:73375693-73375712 | None:intergenic | 40.0% | |
| AAGTGAGCAGTGAGAATTGT+AGG | - | chr4_2:73376042-73376061 | Msa0621320:CDS | 40.0% | |
| !! | AAGTATTGGCAGCTACAGAA+AGG | + | chr4_2:73376092-73376111 | None:intergenic | 40.0% |
| ! | CAGCAACCAAAGCTTTTTGA+TGG | - | chr4_2:73376242-73376261 | Msa0621320:intron | 40.0% |
| TCCTGCTAAATCCAATCCTT+TGG | - | chr4_2:73376439-73376458 | Msa0621320:intron | 40.0% | |
| TCCAAAGGATTGGATTTAGC+AGG | + | chr4_2:73376443-73376462 | None:intergenic | 40.0% | |
| ! | TGCATCCTTTTCCAAAGGAT+TGG | + | chr4_2:73376453-73376472 | None:intergenic | 40.0% |
| CTTGCAACCTTTGAACAAGT+AGG | + | chr4_2:73376518-73376537 | None:intergenic | 40.0% | |
| CAAAGGTTGCAAGCAATACA+TGG | - | chr4_2:73376525-73376544 | Msa0621320:intron | 40.0% | |
| ATTGCAGGTGAGTGAAACTG+CGG | + | chr4_2:73371456-73371475 | None:intergenic | 45.0% | |
| AAAATTCCCTTCACTCGTCG+AGG | - | chr4_2:73371616-73371635 | Msa0621320:CDS | 45.0% | |
| AAGTTGTCAATGTGAGGAGC+AGG | + | chr4_2:73371742-73371761 | None:intergenic | 45.0% | |
| TGCTCCTCACATTGACAACT+TGG | - | chr4_2:73371741-73371760 | Msa0621320:intron | 45.0% | |
| GTGACCAAGTTGTCAATGTG+AGG | + | chr4_2:73371748-73371767 | None:intergenic | 45.0% | |
| ! | AGGGTTCTAACCTGGTGATT+TGG | + | chr4_2:73371836-73371855 | None:intergenic | 45.0% |
| TCGGACCCGCTAAATATATG+AGG | - | chr4_2:73372082-73372101 | Msa0621320:intron | 45.0% | |
| CGGACCCGCTAAATATATGA+GGG | - | chr4_2:73372083-73372102 | Msa0621320:intron | 45.0% | |
| TGCCTTGGTATACCAATCAG+AGG | - | chr4_2:73372182-73372201 | Msa0621320:CDS | 45.0% | |
| GATGATGAAATGCAAGGTGG+AGG | - | chr4_2:73372391-73372410 | Msa0621320:intron | 45.0% | |
| CACTCATGAAAATCATGCCG+AGG | - | chr4_2:73372447-73372466 | Msa0621320:CDS | 45.0% | |
| TCATGAAAATCATGCCGAGG+AGG | - | chr4_2:73372450-73372469 | Msa0621320:CDS | 45.0% | |
| !!! | TGTGGGTGTTTTTTCCTCCT+CGG | + | chr4_2:73372467-73372486 | None:intergenic | 45.0% |
| CTTCCTGGACTTCTTTCTTG+TGG | + | chr4_2:73372485-73372504 | None:intergenic | 45.0% | |
| TAAGACAAGCACGGTAAGCT+TGG | - | chr4_2:73372510-73372529 | Msa0621320:CDS | 45.0% | |
| TGGAGAAGCTAAAGACTAGC+AGG | - | chr4_2:73372530-73372549 | Msa0621320:CDS | 45.0% | |
| TCGGAAAAGAAGGCTTTGCA+CGG | + | chr4_2:73372573-73372592 | None:intergenic | 45.0% | |
| TCCGACTAAGAAAAGGGTTC+AGG | - | chr4_2:73372588-73372607 | Msa0621320:intron | 45.0% | |
| GGTTCCGCAAGACATTCTTT+CGG | - | chr4_2:73372609-73372628 | Msa0621320:intron | 45.0% | |
| TGGTTAAGAGAGGAGCAAGA+TGG | - | chr4_2:73372769-73372788 | Msa0621320:CDS | 45.0% | |
| GTTAAGTGCACAAACTGACG+AGG | - | chr4_2:73372798-73372817 | Msa0621320:CDS | 45.0% | |
| AATGAAGGAGGAACTGGTGT+TGG | + | chr4_2:73372841-73372860 | None:intergenic | 45.0% | |
| TCACTGAATGAAGGAGGAAC+TGG | + | chr4_2:73372847-73372866 | None:intergenic | 45.0% | |
| TTGAGGTCACTGAATGAAGG+AGG | + | chr4_2:73372853-73372872 | None:intergenic | 45.0% | |
| GCGAATAGTCATTTGGCACT+TGG | - | chr4_2:73372948-73372967 | Msa0621320:intron | 45.0% | |
| GTCATTTGGCACTTGGAAGT+TGG | - | chr4_2:73372955-73372974 | Msa0621320:intron | 45.0% | |
| TTCAAGTCCCATCAAAACGC+AGG | - | chr4_2:73373258-73373277 | Msa0621320:intron | 45.0% | |
| GCCATTGGGATTCTCAAAGT+TGG | + | chr4_2:73373468-73373487 | None:intergenic | 45.0% | |
| ATTTCAGAGGACATGACTGG+TGG | + | chr4_2:73373512-73373531 | None:intergenic | 45.0% | |
| GTCTACAAAGAGAAGCAGGA+AGG | - | chr4_2:73373565-73373584 | Msa0621320:CDS | 45.0% | |
| GGCTAGAGAAAAATCTAGGC+AGG | - | chr4_2:73373586-73373605 | Msa0621320:CDS | 45.0% | |
| GAGACTGTACAAGCAATTGG+AGG | + | chr4_2:73373782-73373801 | None:intergenic | 45.0% | |
| GAAGATTGCTGGAAAAAGGC+AGG | - | chr4_2:73373898-73373917 | Msa0621320:CDS | 45.0% | |
| AAAAGGCAGGTGAGAAGATC+TGG | - | chr4_2:73373911-73373930 | Msa0621320:CDS | 45.0% | |
| ! | ATCCAGTTTAAGACAGCAGG+TGG | - | chr4_2:73374021-73374040 | Msa0621320:CDS | 45.0% |
| ATCCACCTGCTGTCTTAAAC+TGG | + | chr4_2:73374026-73374045 | None:intergenic | 45.0% | |
| CTATGCCTTGCGTTACAGAA+AGG | - | chr4_2:73374101-73374120 | Msa0621320:CDS | 45.0% | |
| CTCTTCCTTTCTGTAACGCA+AGG | + | chr4_2:73374109-73374128 | None:intergenic | 45.0% | |
| CCTTGCTTGGTACTTTCAGT+AGG | + | chr4_2:73374196-73374215 | None:intergenic | 45.0% | |
| !! | CCTACTGAAAGTACCAAGCA+AGG | - | chr4_2:73374193-73374212 | Msa0621320:CDS | 45.0% |
| CCTGACATCATTACCTTGCT+TGG | + | chr4_2:73374209-73374228 | None:intergenic | 45.0% | |
| CCAAGCAAGGTAATGATGTC+AGG | - | chr4_2:73374206-73374225 | Msa0621320:CDS | 45.0% | |
| ! | TGACGGCTCAACCAGTTTTA+AGG | - | chr4_2:73374266-73374285 | Msa0621320:CDS | 45.0% |
| ! | ACGAGAGACAGAAAGCACAT+TGG | + | chr4_2:73374318-73374337 | None:intergenic | 45.0% |
| TCTCTCGTCAGAAGAATCAG+AGG | - | chr4_2:73374330-73374349 | Msa0621320:CDS | 45.0% | |
| CGATTCGAAATACAGGCTTC+TGG | - | chr4_2:73374412-73374431 | Msa0621320:CDS | 45.0% | |
| AATACAGGCTTCTGGTCCAA+TGG | - | chr4_2:73374420-73374439 | Msa0621320:CDS | 45.0% | |
| GTCACAGGAATTGCACAGAA+TGG | - | chr4_2:73374506-73374525 | Msa0621320:intron | 45.0% | |
| AGAAGCCGGAGAATCAAATG+TGG | - | chr4_2:73374761-73374780 | Msa0621320:intron | 45.0% | |
| !! | GCTTTGAGAAAAGTTGTCGC+AGG | - | chr4_2:73374816-73374835 | Msa0621320:intron | 45.0% |
| TGGGATCCTGAACTTTCACA+CGG | + | chr4_2:73375043-73375062 | None:intergenic | 45.0% | |
| GGCTAGTAGTGTCATGTTTG+CGG | + | chr4_2:73375111-73375130 | None:intergenic | 45.0% | |
| AGCCAAAGTCAGATTGCTCA+TGG | - | chr4_2:73375127-73375146 | Msa0621320:CDS | 45.0% | |
| AGTATTGCTGGGTATTCTGG+AGG | - | chr4_2:73375407-73375426 | Msa0621320:CDS | 45.0% | |
| GTATTGCTGGGTATTCTGGA+GGG | - | chr4_2:73375408-73375427 | Msa0621320:CDS | 45.0% | |
| GACATCCACGGAATTAAGGA+TGG | - | chr4_2:73375664-73375683 | Msa0621320:intron | 45.0% | |
| GCTCTTAATCTTCCAAGACG+GGG | + | chr4_2:73375691-73375710 | None:intergenic | 45.0% | |
| ! | AGGTTCTGACAGCAAACAGA+AGG | + | chr4_2:73375817-73375836 | None:intergenic | 45.0% |
| GCAGATAGCCCTTGTATGAA+GGG | + | chr4_2:73376298-73376317 | None:intergenic | 45.0% | |
| TGCAGATAGCCCTTGTATGA+AGG | + | chr4_2:73376299-73376318 | None:intergenic | 45.0% | |
| CTGCATAGAAAACCAGTGTC+AGG | - | chr4_2:73376350-73376369 | Msa0621320:intron | 45.0% | |
| !! | TCATTTTGGTCACCTGACAC+TGG | + | chr4_2:73376365-73376384 | None:intergenic | 45.0% |
| !! | GTTCGGTGTTGATGCATAGT+AGG | + | chr4_2:73376395-73376414 | None:intergenic | 45.0% |
| !!! | TATTTTATTTATTAAATTCT+TGG | - | chr4_2:73375250-73375269 | Msa0621320:CDS | 5.0% |
| !! | CCTGGTGATTTGGTAGCAGT+TGG | + | chr4_2:73371826-73371845 | None:intergenic | 50.0% |
| CCAACTGCTACCAAATCACC+AGG | - | chr4_2:73371823-73371842 | Msa0621320:intron | 50.0% | |
| TGATGCTGAGTCTGGTGAGA+AGG | - | chr4_2:73372414-73372433 | Msa0621320:intron | 50.0% | |
| GATGCTGAGTCTGGTGAGAA+GGG | - | chr4_2:73372415-73372434 | Msa0621320:intron | 50.0% | |
| CACCCACAAGAAAGAAGTCC+AGG | - | chr4_2:73372479-73372498 | Msa0621320:CDS | 50.0% | |
| GAGAGGAGCAAGATGGTGAA+AGG | - | chr4_2:73372776-73372795 | Msa0621320:CDS | 50.0% | |
| TGCATGTTAGGTGCAGGTTG+AGG | - | chr4_2:73373361-73373380 | Msa0621320:CDS | 50.0% | |
| GGACTTAAAGGAGCTGCACT+CGG | - | chr4_2:73374791-73374810 | Msa0621320:intron | 50.0% | |
| TCAGGAGTCCACTTAGCACA+AGG | + | chr4_2:73374854-73374873 | None:intergenic | 50.0% | |
| !! | TCCTGAGTGTCGATGGGATA+TGG | - | chr4_2:73374868-73374887 | Msa0621320:intron | 50.0% |
| ACCATATCCCATCGACACTC+AGG | + | chr4_2:73374872-73374891 | None:intergenic | 50.0% | |
| TGAACTTTCACACGGCAGCA+AGG | + | chr4_2:73375035-73375054 | None:intergenic | 50.0% | |
| TTGCTGCCGTGTGAAAGTTC+AGG | - | chr4_2:73375034-73375053 | Msa0621320:CDS | 50.0% | |
| ! | TGGGTATTCTGGAGGGAAAG+TGG | - | chr4_2:73375415-73375434 | Msa0621320:CDS | 50.0% |
| CTCACGGAGCCACTACTTTA+AGG | - | chr4_2:73375499-73375518 | Msa0621320:intron | 50.0% | |
| ATTAAGGATGGTCCCCGTCT+TGG | - | chr4_2:73375676-73375695 | Msa0621320:intron | 50.0% | |
| CAAGACCTTGTGATTGCTGC+TGG | - | chr4_2:73376317-73376336 | Msa0621320:intron | 50.0% | |
| ACCTTGTGATTGCTGCTGGA+GGG | - | chr4_2:73376321-73376340 | Msa0621320:intron | 50.0% | |
| GGCAAGGCCTACTTGTTCAA+AGG | - | chr4_2:73376508-73376527 | Msa0621320:intron | 50.0% | |
| ! | GAGGTACCTCGACGAGTGAA+GGG | + | chr4_2:73371625-73371644 | None:intergenic | 55.0% |
| ! | TGAGGTACCTCGACGAGTGA+AGG | + | chr4_2:73371626-73371645 | None:intergenic | 55.0% |
| TGTTGTGGATGACCCACCTG+AGG | - | chr4_2:73373949-73373968 | Msa0621320:CDS | 55.0% | |
| !! | AGTGGACTCCTGAGTGTCGA+TGG | - | chr4_2:73374861-73374880 | Msa0621320:intron | 55.0% |
| !! | GTGGACTCCTGAGTGTCGAT+GGG | - | chr4_2:73374862-73374881 | Msa0621320:intron | 55.0% |
| ! | GCAAGGAGGGAGCATGTAGA+GGG | + | chr4_2:73375018-73375037 | None:intergenic | 55.0% |
| ! | AGCAAGGAGGGAGCATGTAG+AGG | + | chr4_2:73375019-73375038 | None:intergenic | 55.0% |
| CTTTCACACGGCAGCAAGGA+GGG | + | chr4_2:73375031-73375050 | None:intergenic | 55.0% | |
| ACTTTCACACGGCAGCAAGG+AGG | + | chr4_2:73375032-73375051 | None:intergenic | 55.0% | |
| GGGGACCATCCTTAATTCCG+TGG | + | chr4_2:73375672-73375691 | None:intergenic | 55.0% | |
| GACCTTGTGATTGCTGCTGG+AGG | - | chr4_2:73376320-73376339 | Msa0621320:intron | 55.0% | |
| TCCCTCCAGCAGCAATCACA+AGG | + | chr4_2:73376325-73376344 | None:intergenic | 55.0% | |
| CCTCTGCATCACATCGCCTT+TGG | + | chr4_2:73376484-73376503 | None:intergenic | 55.0% | |
| CCAAAGGCGATGTGATGCAG+AGG | - | chr4_2:73376481-73376500 | Msa0621320:intron | 55.0% | |
| GCGATGTGATGCAGAGGCTT+TGG | - | chr4_2:73376487-73376506 | Msa0621320:intron | 55.0% | |
| ! | GTGATGCAGAGGCTTTGGCA+AGG | - | chr4_2:73376492-73376511 | Msa0621320:intron | 55.0% |
| ! | GATGGCGGCAGAGAATGCCT+TGG | - | chr4_2:73372167-73372186 | Msa0621320:CDS | 60.0% |
| GGTGGAGGTGATGCTGAGTC+TGG | - | chr4_2:73372406-73372425 | Msa0621320:intron | 60.0% | |
| GAGTCTGGTGAGAAGGGAGC+TGG | - | chr4_2:73372421-73372440 | Msa0621320:intron | 60.0% | |
| TCTGGTGAGAAGGGAGCTGG+AGG | - | chr4_2:73372424-73372443 | Msa0621320:intron | 60.0% | |
| CTGTTCAGCTCTGTCCGTGC+AGG | - | chr4_2:73375174-73375193 | Msa0621320:CDS | 60.0% | |
| AGCTCTGTCCGTGCAGGAGA+AGG | - | chr4_2:73375180-73375199 | Msa0621320:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 73371191 | 73376694 | 73371191 | ID=Msa0621320;Name=Msa0621320 |
| chr4_2 | mRNA | 73371191 | 73376694 | 73371191 | ID=Msa0621320-mRNA-1;Parent=Msa0621320;Name=Msa0621320-mRNA-1;_AED=0.07;_eAED=0.07;_QI=96|0.83|0.84|1|0.91|0.84|13|79|1037 |
| chr4_2 | exon | 73371191 | 73371231 | 73371191 | ID=Msa0621320-mRNA-1:exon:22002;Parent=Msa0621320-mRNA-1 |
| chr4_2 | exon | 73371252 | 73371640 | 73371252 | ID=Msa0621320-mRNA-1:exon:22001;Parent=Msa0621320-mRNA-1 |
| chr4_2 | exon | 73372165 | 73372283 | 73372165 | ID=Msa0621320-mRNA-1:exon:22000;Parent=Msa0621320-mRNA-1 |
| chr4_2 | exon | 73372432 | 73372597 | 73372432 | ID=Msa0621320-mRNA-1:exon:21999;Parent=Msa0621320-mRNA-1 |
| chr4_2 | exon | 73372684 | 73372890 | 73372684 | ID=Msa0621320-mRNA-1:exon:21998;Parent=Msa0621320-mRNA-1 |
| chr4_2 | exon | 73372996 | 73373182 | 73372996 | ID=Msa0621320-mRNA-1:exon:21997;Parent=Msa0621320-mRNA-1 |
| chr4_2 | exon | 73373358 | 73374514 | 73373358 | ID=Msa0621320-mRNA-1:exon:21996;Parent=Msa0621320-mRNA-1 |
| chr4_2 | exon | 73374606 | 73374713 | 73374606 | ID=Msa0621320-mRNA-1:exon:21995;Parent=Msa0621320-mRNA-1 |
| chr4_2 | exon | 73374973 | 73375505 | 73374973 | ID=Msa0621320-mRNA-1:exon:21994;Parent=Msa0621320-mRNA-1 |
| chr4_2 | exon | 73376041 | 73376154 | 73376041 | ID=Msa0621320-mRNA-1:exon:21993;Parent=Msa0621320-mRNA-1 |
| chr4_2 | exon | 73376248 | 73376318 | 73376248 | ID=Msa0621320-mRNA-1:exon:21992;Parent=Msa0621320-mRNA-1 |
| chr4_2 | exon | 73376396 | 73376449 | 73376396 | ID=Msa0621320-mRNA-1:exon:21991;Parent=Msa0621320-mRNA-1 |
| chr4_2 | exon | 73376552 | 73376694 | 73376552 | ID=Msa0621320-mRNA-1:exon:21990;Parent=Msa0621320-mRNA-1 |
| chr4_2 | five_prime_UTR | 73376599 | 73376694 | 73376599 | ID=Msa0621320-mRNA-1:five_prime_utr;Parent=Msa0621320-mRNA-1 |
| chr4_2 | CDS | 73376552 | 73376598 | 73376552 | ID=Msa0621320-mRNA-1:cds;Parent=Msa0621320-mRNA-1 |
| chr4_2 | CDS | 73376396 | 73376449 | 73376396 | ID=Msa0621320-mRNA-1:cds;Parent=Msa0621320-mRNA-1 |
| chr4_2 | CDS | 73376248 | 73376318 | 73376248 | ID=Msa0621320-mRNA-1:cds;Parent=Msa0621320-mRNA-1 |
| chr4_2 | CDS | 73376041 | 73376154 | 73376041 | ID=Msa0621320-mRNA-1:cds;Parent=Msa0621320-mRNA-1 |
| chr4_2 | CDS | 73374973 | 73375505 | 73374973 | ID=Msa0621320-mRNA-1:cds;Parent=Msa0621320-mRNA-1 |
| chr4_2 | CDS | 73374606 | 73374713 | 73374606 | ID=Msa0621320-mRNA-1:cds;Parent=Msa0621320-mRNA-1 |
| chr4_2 | CDS | 73373358 | 73374514 | 73373358 | ID=Msa0621320-mRNA-1:cds;Parent=Msa0621320-mRNA-1 |
| chr4_2 | CDS | 73372996 | 73373182 | 73372996 | ID=Msa0621320-mRNA-1:cds;Parent=Msa0621320-mRNA-1 |
| chr4_2 | CDS | 73372684 | 73372890 | 73372684 | ID=Msa0621320-mRNA-1:cds;Parent=Msa0621320-mRNA-1 |
| chr4_2 | CDS | 73372432 | 73372597 | 73372432 | ID=Msa0621320-mRNA-1:cds;Parent=Msa0621320-mRNA-1 |
| chr4_2 | CDS | 73372165 | 73372283 | 73372165 | ID=Msa0621320-mRNA-1:cds;Parent=Msa0621320-mRNA-1 |
| chr4_2 | CDS | 73371290 | 73371640 | 73371290 | ID=Msa0621320-mRNA-1:cds;Parent=Msa0621320-mRNA-1 |
| chr4_2 | three_prime_UTR | 73371252 | 73371289 | 73371252 | ID=Msa0621320-mRNA-1:three_prime_utr;Parent=Msa0621320-mRNA-1 |
| chr4_2 | three_prime_UTR | 73371191 | 73371231 | 73371191 | ID=Msa0621320-mRNA-1:three_prime_utr;Parent=Msa0621320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
