AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0236820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0236820 MtrunA17_Chr2g0285611 92.382 1037 49 3 1 1037 1 1007 0.0 1944
Msa0236820 MtrunA17_Chr7g0261781 45.187 374 189 4 661 1033 325 683 3.15e-98 325
Msa0236820 MtrunA17_Chr7g0261781 40.476 84 50 0 1 84 20 103 1.06e-14 79.0
Msa0236820 MtrunA17_Chr2g0316851 30.769 130 80 3 686 814 425 545 3.71e-12 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0236820 AT4G21070.1 51.395 430 161 7 614 1035 551 940 3.25e-139 442
Msa0236820 AT4G21070.1 44.937 316 139 10 4 314 7 292 6.45e-65 238
Msa0236820 AT1G04020.1 45.067 375 196 2 661 1033 343 709 2.88e-103 340
Msa0236820 AT1G04020.2 45.067 375 196 2 661 1033 343 709 3.12e-103 340
Msa0236820 AT3G15120.2 32.432 111 72 3 689 798 561 669 5.01e-11 67.8

Find 221 sgRNAs with CRISPR-Local

Find 379 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTAGGCAGGACCTTATT+AGG 0.146681 2_2:-9826739 Msa0236820:CDS
CAAAGTATTGCTGGGTATTC+TGG 0.198978 2_2:-9824932 Msa0236820:CDS
ATGGGACTTGAAAATAATTC+AGG 0.235996 2_2:+9827089 None:intergenic
CTGTGACAATGTATGACTTT+AGG 0.249087 2_2:+9825846 None:intergenic
CCTTCAAAATCAGCAGTTAC+AGG 0.252043 2_2:+9825873 None:intergenic
CCTTGCTCAATAAAGTTTAT+AGG 0.266305 2_2:-9823754 Msa0236820:exon
TTAGTCCTAGAGATGAATTC+AGG 0.281555 2_2:+9826185 None:intergenic
ATAGCATCAACAGATGAAAA+TGG 0.283045 2_2:-9824973 Msa0236820:CDS
TAGTAGGCAGTATTTCATTT+TGG 0.284397 2_2:+9823961 None:intergenic
CATCTTCAAAATACACATTT+GGG 0.285159 2_2:+9825630 None:intergenic
CAAACTACAGTGATTCTCTT+TGG 0.291138 2_2:+9826091 None:intergenic
GTTCTGAAAACTTGGGATTC+AGG 0.296893 2_2:-9825009 Msa0236820:CDS
TGTCGACATCCACGGAATTA+AGG 0.297952 2_2:-9824677 Msa0236820:CDS
GCATATATGTTTATAAATAA+AGG 0.310476 2_2:+9823676 None:intergenic
TCATCTTCAAAATACACATT+TGG 0.311644 2_2:+9825629 None:intergenic
TGTACAGTCTCCAATATATT+AGG 0.313912 2_2:-9826545 Msa0236820:CDS
AGAAGTTCTGATGATCTAAA+TGG 0.315564 2_2:-9826803 Msa0236820:CDS
CTGAGAAGATTGCTGGAAAA+AGG 0.316352 2_2:-9826442 Msa0236820:CDS
TTCCTGGACTTCTTTCTTGT+GGG 0.316458 2_2:+9827855 None:intergenic
TATCTTGTCATCCTTATAGA+TGG 0.317902 2_2:-9825965 Msa0236820:CDS
GCTTGTCTTAAGTTTCTTCC+TGG 0.321042 2_2:+9827839 None:intergenic
GCTTCTGGAATCAATTTATT+CGG 0.326441 2_2:-9828598 Msa0236820:CDS
TCCTGAGTGTCGATGGGATA+TGG 0.326844 2_2:-9825468 Msa0236820:intron
ATAAAACATTTCCTTAAAAC+TGG 0.334024 2_2:+9826059 None:intergenic
TCCGAGTGATGAAATTAATA+TGG 0.343977 2_2:-9826705 Msa0236820:CDS
TCCGACTAAGAAAAGGGTTC+AGG 0.345823 2_2:-9827748 Msa0236820:CDS
GACAATTTAGTTCCCTAATA+AGG 0.350465 2_2:+9826726 None:intergenic
ATCCACCTGCTGTCTTAAAC+TGG 0.352759 2_2:+9826313 None:intergenic
CCTGTCTTCAAATTCCTTAG+TGG 0.358316 2_2:+9827699 None:intergenic
TGGCTACAAGTTCTATTTCA+TGG 0.363507 2_2:-9824075 Msa0236820:CDS
AAGGACTCTCAAAGTATTGC+TGG 0.365029 2_2:-9824941 Msa0236820:CDS
AGGGTTCTAACCTGGTGATT+TGG 0.365213 2_2:+9828555 None:intergenic
AAGAGAAATGTAAGGGCAAT+TGG 0.367512 2_2:-9827627 Msa0236820:CDS
CTTGCAGAAAAGATGATTGC+AGG 0.373026 2_2:+9828919 None:intergenic
TGAATTTGAAAGAGTGTTGA+AGG 0.375830 2_2:-9825037 Msa0236820:CDS
TCCTGCTAAATCCAATCCTT+TGG 0.379223 2_2:-9823898 Msa0236820:CDS
AATTCATCGAAATTCGAAAT+GGG 0.385285 2_2:-9829118 Msa0236820:exon
ATGAAAATGGGGCATGTAGA+AGG 0.386673 2_2:-9824960 Msa0236820:CDS
CTTTATGCGATTCGAAATAC+AGG 0.389854 2_2:-9825931 Msa0236820:CDS
CAATTCATCGAAATTCGAAA+TGG 0.391585 2_2:-9829119 Msa0236820:exon
AGGTGAAAGAACCATTCTTT+TGG 0.396721 2_2:-9827587 Msa0236820:CDS
GCTCAAGACTATAGATTATG+AGG 0.398847 2_2:+9823922 None:intergenic
CTTCCTGGACTTCTTTCTTG+TGG 0.400892 2_2:+9827854 None:intergenic
CAAGACCTTGTGATTGCTGC+TGG 0.401161 2_2:-9824020 Msa0236820:CDS
GGCTAGTAGTGTCATGTTTG+CGG 0.404271 2_2:+9825228 None:intergenic
TAGCATCAACAGATGAAAAT+GGG 0.405758 2_2:-9824972 Msa0236820:CDS
GCGATGTGATGCAGAGGCTT+TGG 0.407498 2_2:-9823850 Msa0236820:CDS
TTCAGCCAATTGATTGCCAT+TGG 0.412349 2_2:+9826856 None:intergenic
CAATGTTCTGAGAAGATTGC+TGG 0.414944 2_2:-9826449 Msa0236820:CDS
CATCTGTTGATGCTATTACA+TGG 0.415551 2_2:+9824980 None:intergenic
ATCTAGGCAGGACCTTATTA+GGG 0.417382 2_2:-9826738 Msa0236820:CDS
GACTATAGATTATGAGGGTT+CGG 0.418186 2_2:+9823928 None:intergenic
TAAGTTCCAGTCCATCTATA+AGG 0.419080 2_2:+9825954 None:intergenic
TGCATTGAAGTTAAATCCTC+AGG 0.419419 2_2:+9826371 None:intergenic
TTGGAGACTGTACAAGCAAT+TGG 0.423260 2_2:+9826554 None:intergenic
AAAAGGCAGGTGAGAAGATC+TGG 0.425108 2_2:-9826425 Msa0236820:CDS
TGGATTCTGAATTCAATTGC+TGG 0.428413 2_2:-9823792 Msa0236820:CDS
TGAAGAAAATATAGAGGAAT+GGG 0.429275 2_2:-9826939 Msa0236820:CDS
CGATTCGAAATACAGGCTTC+TGG 0.434144 2_2:-9825924 Msa0236820:CDS
TTTCATCATCAGCGTCTTTG+AGG 0.436982 2_2:+9827469 None:intergenic
CCTCTGCATCACATCGCCTT+TGG 0.437327 2_2:+9823856 None:intergenic
CAAAGGTTGCAAGCAATACA+TGG 0.444277 2_2:-9823812 Msa0236820:CDS
AGTCATTGAGGAGCAATCAT+TGG 0.446833 2_2:-9826663 Msa0236820:CDS
TTCATGTTCCTTGTGCTAAG+TGG 0.449596 2_2:-9825493 Msa0236820:CDS
AGCAAGGAGGGAGCATGTAG+AGG 0.450172 2_2:+9825320 None:intergenic
TCATCAAAATAGTGCACCAT+TGG 0.451528 2_2:+9825900 None:intergenic
TAGTGAAAGAAGAAAGAAGA+AGG 0.453835 2_2:+9829154 None:intergenic
AAAGACTAGCAGGAAAAGTC+TGG 0.455639 2_2:-9827796 Msa0236820:CDS
GAGAACTCAAATGTCCAATC+TGG 0.455932 2_2:-9829075 Msa0236820:intron
CCTGACATCATTACCTTGCT+TGG 0.458906 2_2:+9826130 None:intergenic
TCATAACGCTCTTCATCAAC+AGG 0.458952 2_2:+9824706 None:intergenic
TCCAAAGGATTGGATTTAGC+AGG 0.460839 2_2:+9823897 None:intergenic
AACCATGAGCAATCTGACTT+TGG 0.463621 2_2:+9825207 None:intergenic
AGGTTACAGTTCTGAAAACT+TGG 0.463872 2_2:-9825017 Msa0236820:CDS
TTGCTGCCGTGTGAAAGTTC+AGG 0.465616 2_2:-9825302 Msa0236820:CDS
CCTTGCTTGGTACTTTCAGT+AGG 0.466860 2_2:+9826143 None:intergenic
ATTAAGGATGGTCCCCGTCT+TGG 0.467573 2_2:-9824661 Msa0236820:CDS
CCTGGTGATTTGGTAGCAGT+TGG 0.470823 2_2:+9828565 None:intergenic
ATCTAGCAAGCTCTTTGCAT+TGG 0.471544 2_2:+9826345 None:intergenic
GAATCCCAATGGCAATCAAT+TGG 0.471548 2_2:-9826861 Msa0236820:CDS
TGCAGATAGCCCTTGTATGA+AGG 0.471841 2_2:+9824041 None:intergenic
GCCATTGGGATTCTCAAAGT+TGG 0.471965 2_2:+9826871 None:intergenic
TAAATCCAATCCTTTGGAAA+AGG 0.473536 2_2:-9823892 Msa0236820:CDS
TGCTCCTCACATTGACAACT+TGG 0.474339 2_2:-9828647 Msa0236820:CDS
CACCCACAAGAAAGAAGTCC+AGG 0.474478 2_2:-9827857 Msa0236820:CDS
GTTCGGTGTTGATGCATAGT+AGG 0.476812 2_2:+9823945 None:intergenic
TGAAATTGAAGAAAATATAG+AGG 0.481187 2_2:-9826945 Msa0236820:CDS
TCCTCTCTTAACCAAAAGAA+TGG 0.482001 2_2:+9827576 None:intergenic
GAATTGAATTGATACCAGAT+TGG 0.482751 2_2:+9829061 None:intergenic
GGTGGAGGTGATGCTGAGTC+TGG 0.483277 2_2:-9827930 Msa0236820:CDS
TTCATCCAGTTTAAGACAGC+AGG 0.485285 2_2:-9826318 Msa0236820:CDS
TAAGACAAGCACGGTAAGCT+TGG 0.485777 2_2:-9827826 Msa0236820:CDS
CTTCAATTAAGAGAAATGTA+AGG 0.486241 2_2:-9827635 Msa0236820:CDS
TTGAAGAAAATATAGAGGAA+TGG 0.486332 2_2:-9826940 Msa0236820:CDS
AGAAGTCTACAAAGAGAAGC+AGG 0.488220 2_2:-9826775 Msa0236820:CDS
ATCTGTTGATGCTATTACAT+GGG 0.489052 2_2:+9824981 None:intergenic
TCAGCCAATTGATTGCCATT+GGG 0.491155 2_2:+9826857 None:intergenic
TGGAGAAGCTAAAGACTAGC+AGG 0.491806 2_2:-9827806 Msa0236820:CDS
AGAGAATCACTGTAGTTTGA+CGG 0.491941 2_2:-9826087 Msa0236820:CDS
GACGAGGATCAAATTATTGA+AGG 0.493589 2_2:-9827522 Msa0236820:CDS
GGTTCCGCAAGACATTCTTT+CGG 0.495492 2_2:-9827727 Msa0236820:CDS
TCACTGAATGAAGGAGGAAC+TGG 0.495681 2_2:+9827492 None:intergenic
TGCTCTTAATCTTCCAAGAC+GGG 0.497751 2_2:+9824648 None:intergenic
CTGTTCAGCTCTGTCCGTGC+AGG 0.497892 2_2:-9825162 Msa0236820:CDS
GAGAGGAGCAAGATGGTGAA+AGG 0.500805 2_2:-9827560 Msa0236820:CDS
AAGATCTGGAAAACAAAGGC+TGG 0.501403 2_2:-9826411 Msa0236820:CDS
GGCTACAAGTTCTATTTCAT+GGG 0.501495 2_2:-9824074 Msa0236820:CDS
CCTATAAACTTTATTGAGCA+AGG 0.503689 2_2:+9823754 None:intergenic
GAGTCTGGTGAGAAGGGAGC+TGG 0.504548 2_2:-9827915 Msa0236820:CDS
CTGCATAGAAAACCAGTGTC+AGG 0.507664 2_2:-9823987 Msa0236820:CDS
CCAAGCAAGGTAATGATGTC+AGG 0.508294 2_2:-9826130 Msa0236820:CDS
TGTCATCCTTATAGATGGAC+TGG 0.513451 2_2:-9825960 Msa0236820:CDS
TCTTTGGATGAATCATTCAA+AGG 0.514742 2_2:+9826107 None:intergenic
TGCATGTTAGGTGCAGGTTG+AGG 0.517829 2_2:-9826975 Msa0236820:intron
GGCAAGGCCTACTTGTTCAA+AGG 0.518034 2_2:-9823829 Msa0236820:CDS
GAAAATAATTCAGGGGAGCA+TGG 0.519169 2_2:+9827098 None:intergenic
AGTGGACTCCTGAGTGTCGA+TGG 0.519457 2_2:-9825475 Msa0236820:CDS
TGGGACTTGAAAATAATTCA+GGG 0.521669 2_2:+9827090 None:intergenic
TGAGGTACCTCGACGAGTGA+AGG 0.524772 2_2:+9828765 None:intergenic
AGTGAAAGAAGAAAGAAGAA+GGG 0.525910 2_2:+9829155 None:intergenic
CACATTGGTACTCTTTGACA+TGG 0.526913 2_2:+9826036 None:intergenic
TAGTCCTAGAGATGAATTCA+GGG 0.527752 2_2:+9826186 None:intergenic
GACCTTGTGATTGCTGCTGG+AGG 0.529685 2_2:-9824017 Msa0236820:CDS
AGCTCTGTCCGTGCAGGAGA+AGG 0.531310 2_2:-9825156 Msa0236820:intron
CTATGCCTTGCGTTACAGAA+AGG 0.534499 2_2:-9826235 Msa0236820:CDS
AAGTTGTCAATGTGAGGAGC+AGG 0.540154 2_2:+9828649 None:intergenic
CTTTCACACGGCAGCAAGGA+GGG 0.540628 2_2:+9825308 None:intergenic
GCAGATAGCCCTTGTATGAA+GGG 0.554517 2_2:+9824042 None:intergenic
CTGCTCTTAATCTTCCAAGA+CGG 0.555478 2_2:+9824647 None:intergenic
TCCATATTAATTTCATCACT+CGG 0.555531 2_2:+9826704 None:intergenic
GTCACAGGAATTGCACAGAA+TGG 0.555665 2_2:-9825830 Msa0236820:intron
CTCTTCCTTTCTGTAACGCA+AGG 0.556323 2_2:+9826230 None:intergenic
TCTTTGAGGTCACTGAATGA+AGG 0.558765 2_2:+9827483 None:intergenic
TGGTTAAGAGAGGAGCAAGA+TGG 0.558959 2_2:-9827567 Msa0236820:CDS
GCAAGGAGGGAGCATGTAGA+GGG 0.559253 2_2:+9825321 None:intergenic
TGGGTATTCTGGAGGGAAAG+TGG 0.560625 2_2:-9824921 Msa0236820:CDS
ATCCAGTTTAAGACAGCAGG+TGG 0.562777 2_2:-9826315 Msa0236820:CDS
AAGCAGAAATAAGTAGAAGC+CGG 0.563138 2_2:-9825589 Msa0236820:CDS
TTTCCCCTGAATTCATCTCT+AGG 0.563996 2_2:-9826190 Msa0236820:CDS
CTTGCAACCTTTGAACAAGT+AGG 0.566870 2_2:+9823822 None:intergenic
TTCAAGTCCCATCAAAACGC+AGG 0.566895 2_2:-9827078 Msa0236820:intron
CCCTTCAAAACAAACTCTAT+CGG 0.566915 2_2:-9827445 Msa0236820:intron
TTCAATTAAGAGAAATGTAA+GGG 0.567148 2_2:-9827634 Msa0236820:CDS
AGCCAAAGTCAGATTGCTCA+TGG 0.567852 2_2:-9825209 Msa0236820:CDS
CTATCAAATAAATCAACAGA+TGG 0.571152 2_2:+9827146 None:intergenic
TTATATTACCTTCTCCTGCA+CGG 0.571440 2_2:+9825148 None:intergenic
CTAATTTCAGAGGACATGAC+TGG 0.572021 2_2:+9826824 None:intergenic
GAGGTACCTCGACGAGTGAA+GGG 0.572483 2_2:+9828766 None:intergenic
ATTCATCGAAATTCGAAATG+GGG 0.572510 2_2:-9829117 Msa0236820:exon
TGATGCTGAGTCTGGTGAGA+AGG 0.573479 2_2:-9827922 Msa0236820:CDS
GGTTACAGTTCTGAAAACTT+GGG 0.574253 2_2:-9825016 Msa0236820:CDS
CTAAAGTCATACATTGTCAC+AGG 0.574406 2_2:-9825845 Msa0236820:CDS
GGACTTAAAGGAGCTGCACT+CGG 0.574494 2_2:-9825545 Msa0236820:CDS
GAGTTCAAAACAATGGTGCT+AGG 0.577153 2_2:-9826523 Msa0236820:CDS
GCTTTGAGAAAAGTTGTCGC+AGG 0.577590 2_2:-9825520 Msa0236820:CDS
GTGGACTCCTGAGTGTCGAT+GGG 0.580430 2_2:-9825474 Msa0236820:CDS
TTCATCGAAATTCGAAATGG+GGG 0.580695 2_2:-9829116 Msa0236820:exon
ACCATATCCCATCGACACTC+AGG 0.582483 2_2:+9825467 None:intergenic
TTCTTTCGGAAACTCCACTA+AGG 0.583320 2_2:-9827713 Msa0236820:CDS
ATCAGAACTTCTAATTTCAG+AGG 0.583325 2_2:+9826814 None:intergenic
AATACAGGCTTCTGGTCCAA+TGG 0.586341 2_2:-9825916 Msa0236820:CDS
AGGACTCTCAAAGTATTGCT+GGG 0.586594 2_2:-9824940 Msa0236820:CDS
AAAACAAAGGCTGGATGTTG+TGG 0.586762 2_2:-9826402 Msa0236820:CDS
TATAACATCAAAAGTCATTG+AGG 0.587526 2_2:-9826675 Msa0236820:CDS
CCACTAAGGAATTTGAAGAC+AGG 0.591544 2_2:-9827699 Msa0236820:CDS
GAAGTTAATGTCGACATCCA+CGG 0.594832 2_2:-9824685 Msa0236820:CDS
TATTACTCAAGTTAACATAG+AGG 0.597075 2_2:-9827670 Msa0236820:CDS
AATGAAGGAGGAACTGGTGT+TGG 0.597110 2_2:+9827498 None:intergenic
AAGATTAAGAGCAGTGAACA+AGG 0.602728 2_2:-9824638 Msa0236820:intron
ATTGAAGTTAAATCCTCAGG+TGG 0.604316 2_2:+9826374 None:intergenic
CCAACTGCTACCAAATCACC+AGG 0.605074 2_2:-9828565 Msa0236820:intron
TCTGGTGAGAAGGGAGCTGG+AGG 0.606167 2_2:-9827912 Msa0236820:CDS
TCCCTCCAGCAGCAATCACA+AGG 0.608614 2_2:+9824015 None:intergenic
AACACTGATTTGGAATCATG+TGG 0.609865 2_2:+9823721 None:intergenic
ATTACTCAAGTTAACATAGA+GGG 0.610507 2_2:-9827669 Msa0236820:CDS
CTCAAGACTATAGATTATGA+GGG 0.610814 2_2:+9823923 None:intergenic
AGTATTGCTGGGTATTCTGG+AGG 0.610995 2_2:-9824929 Msa0236820:CDS
TCGGAAAAGAAGGCTTTGCA+CGG 0.612335 2_2:+9827766 None:intergenic
ACCTTGTGATTGCTGCTGGA+GGG 0.612846 2_2:-9824016 Msa0236820:CDS
GATGCTGAGTCTGGTGAGAA+GGG 0.621769 2_2:-9827921 Msa0236820:CDS
GAGACTGTACAAGCAATTGG+AGG 0.622478 2_2:+9826557 None:intergenic
CCTACTGAAAGTACCAAGCA+AGG 0.625040 2_2:-9826143 Msa0236820:CDS
GTCTACAAAGAGAAGCAGGA+AGG 0.627465 2_2:-9826771 Msa0236820:CDS
AGCATCAACAGATGAAAATG+GGG 0.627540 2_2:-9824971 Msa0236820:CDS
CACTCATGAAAATCATGCCG+AGG 0.633459 2_2:-9827889 Msa0236820:CDS
GACATCCACGGAATTAAGGA+TGG 0.634690 2_2:-9824673 Msa0236820:CDS
AAAATTCCCTTCACTCGTCG+AGG 0.635135 2_2:-9828772 Msa0236820:intron
ACCAACTTTGAGAATCCCAA+TGG 0.637438 2_2:-9826872 Msa0236820:CDS
AGAAAATATAGAGGAATGGG+TGG 0.638006 2_2:-9826936 Msa0236820:CDS
CCAAAGGCGATGTGATGCAG+AGG 0.638380 2_2:-9823856 Msa0236820:CDS
GGGGACCATCCTTAATTCCG+TGG 0.639704 2_2:+9824668 None:intergenic
ATCTTCAAAATACACATTTG+GGG 0.641039 2_2:+9825631 None:intergenic
TCATGAAAATCATGCCGAGG+AGG 0.644659 2_2:-9827886 Msa0236820:CDS
TCTCTCGTCAGAAGAATCAG+AGG 0.646696 2_2:-9826006 Msa0236820:CDS
GTATTGCTGGGTATTCTGGA+GGG 0.647435 2_2:-9824928 Msa0236820:CDS
CTAAGGAATTTGAAGACAGG+AGG 0.648127 2_2:-9827696 Msa0236820:CDS
GTGATGCAGAGGCTTTGGCA+AGG 0.648646 2_2:-9823845 Msa0236820:CDS
AGTCCTAGAGATGAATTCAG+GGG 0.651447 2_2:+9826187 None:intergenic
TGAACTTTCACACGGCAGCA+AGG 0.654872 2_2:+9825304 None:intergenic
TTGAGGTCACTGAATGAAGG+AGG 0.657965 2_2:+9827486 None:intergenic
AAGCTTGCATGAAAGAAACA+AGG 0.660020 2_2:-9824729 Msa0236820:CDS
GATGATGAAATGCAAGGTGG+AGG 0.660597 2_2:-9827945 Msa0236820:CDS
TGAGAAGATCTGGAAAACAA+AGG 0.666192 2_2:-9826415 Msa0236820:CDS
ATATTAGGAGTTCAAAACAA+TGG 0.668480 2_2:-9826530 Msa0236820:CDS
TCAGGAGTCCACTTAGCACA+AGG 0.674168 2_2:+9825485 None:intergenic
ACTTTCACACGGCAGCAAGG+AGG 0.676599 2_2:+9825307 None:intergenic
GTTACAGATGATGAAATGCA+AGG 0.682855 2_2:-9827951 Msa0236820:CDS
TGGGATCCTGAACTTTCACA+CGG 0.683715 2_2:+9825296 None:intergenic
TTGAAGTTAAATCCTCAGGT+GGG 0.684063 2_2:+9826375 None:intergenic
GTGACCAAGTTGTCAATGTG+AGG 0.685620 2_2:+9828643 None:intergenic
GAAGAAACTTAAGACAAGCA+CGG 0.689445 2_2:-9827835 Msa0236820:CDS
ACGAGAGACAGAAAGCACAT+TGG 0.691830 2_2:+9826021 None:intergenic
ATTTCAGAGGACATGACTGG+TGG 0.697088 2_2:+9826827 None:intergenic
GGGACTTGAAAATAATTCAG+GGG 0.697974 2_2:+9827091 None:intergenic
TGTTGTGGATGACCCACCTG+AGG 0.704326 2_2:-9826387 Msa0236820:CDS
GTTTCCGAAAGAATGTCTTG+CGG 0.714815 2_2:+9827723 None:intergenic
AGAAGCCGGAGAATCAAATG+TGG 0.719929 2_2:-9825575 Msa0236820:CDS
GTTAAGTGCACAAACTGACG+AGG 0.720885 2_2:-9827538 Msa0236820:CDS
GCTCTTAATCTTCCAAGACG+GGG 0.721448 2_2:+9824649 None:intergenic
ATTGCAGGTGAGTGAAACTG+CGG 0.761313 2_2:+9828934 None:intergenic
ACAGATGATGAAATGCAAGG+TGG 0.783752 2_2:-9827948 Msa0236820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCATAATCATAATTAATTA+GGG + chr2_2:9824175-9824194 None:intergenic 10.0%
!! AATCATAATCATAATTAATT+AGG + chr2_2:9824176-9824195 None:intergenic 10.0%
!! AAAACAAAAATTATAAAAGA+GGG + chr2_2:9824328-9824347 None:intergenic 10.0%
!! AAAAACAAAAATTATAAAAG+AGG + chr2_2:9824329-9824348 None:intergenic 10.0%
!! ACAAATAATTAAATAATTAC+TGG + chr2_2:9824381-9824400 None:intergenic 10.0%
!! TTAATAAAACTTCAATAAAT+AGG + chr2_2:9825864-9825883 None:intergenic 10.0%
!!! AAAGTTGTATATTTTTATTG+TGG - chr2_2:9825580-9825599 Msa0236820:CDS 15.0%
!! AACAATTATTAATCATAACA+TGG + chr2_2:9828268-9828287 None:intergenic 15.0%
!! AAATTTGATGCAAATATATA+TGG - chr2_2:9828509-9828528 Msa0236820:intron 15.0%
!! AATATCAAATGTATAACAAA+TGG + chr2_2:9828643-9828662 None:intergenic 15.0%
!! GCATATATGTTTATAAATAA+AGG + chr2_2:9829188-9829207 None:intergenic 15.0%
!! TCATACACAAATGATAATTT+GGG + chr2_2:9824126-9824145 None:intergenic 20.0%
!! ATCATACACAAATGATAATT+TGG + chr2_2:9824127-9824146 None:intergenic 20.0%
!! ATGATTATGATTAATTTCAG+AGG - chr2_2:9824184-9824203 Msa0236820:intron 20.0%
!! AGAAACTATAACATGTTATT+TGG - chr2_2:9824355-9824374 Msa0236820:intron 20.0%
!!! CTTAACACTCATTTTATATA+AGG + chr2_2:9824405-9824424 None:intergenic 20.0%
!!! ATGTTTATATAGTGTTTTAG+AGG + chr2_2:9824560-9824579 None:intergenic 20.0%
!!! GAATTTTAACCAATAAAAGA+GGG + chr2_2:9824584-9824603 None:intergenic 20.0%
!!! TGAATTTTAACCAATAAAAG+AGG + chr2_2:9824585-9824604 None:intergenic 20.0%
!!! TTATTGGTTAAAATTCATGT+CGG - chr2_2:9824588-9824607 Msa0236820:intron 20.0%
!! AAGTTTCTCAATTAAAAAAG+AGG + chr2_2:9824871-9824890 None:intergenic 20.0%
!! TTCAATTAAGAGAAATGTAA+GGG - chr2_2:9825227-9825246 Msa0236820:CDS 20.0%
!! TTTATTGTGGAATTGAAATT+TGG - chr2_2:9825593-9825612 Msa0236820:CDS 20.0%
!! TGAAATTGAAGAAAATATAG+AGG - chr2_2:9825916-9825935 Msa0236820:CDS 20.0%
!! ATAAAACATTTCCTTAAAAC+TGG + chr2_2:9826805-9826824 None:intergenic 20.0%
!! AACTCGATTAAATCAATTAT+TGG + chr2_2:9827141-9827160 None:intergenic 20.0%
!! AAATTACTAAATAGATATCG+AGG + chr2_2:9827742-9827761 None:intergenic 20.0%
!!! TTTTTCGTTGTTTTTTATTC+TGG - chr2_2:9828079-9828098 Msa0236820:intron 20.0%
!! TTATTGAAACCAAAACAAAA+AGG + chr2_2:9828361-9828380 None:intergenic 20.0%
!! GGATAAAGTTTATGAAAATA+AGG + chr2_2:9828389-9828408 None:intergenic 20.0%
!! ACATTAATTCACAAACTTAT+TGG - chr2_2:9828716-9828735 Msa0236820:intron 20.0%
!!! GTTTTAATGAAGTTTTCGAT+TGG + chr2_2:9823687-9823706 None:intergenic 25.0%
! AATTCATCGAAATTCGAAAT+GGG - chr2_2:9823743-9823762 Msa0236820:three_prime_UTR 25.0%
! CTAGCATAATTCATATAACA+TGG + chr2_2:9824529-9824548 None:intergenic 25.0%
!! ATAAACATACCCTCTTTTAT+TGG - chr2_2:9824572-9824591 Msa0236820:intron 25.0%
! TATTACTCAAGTTAACATAG+AGG - chr2_2:9825191-9825210 Msa0236820:CDS 25.0%
! ATTACTCAAGTTAACATAGA+GGG - chr2_2:9825192-9825211 Msa0236820:CDS 25.0%
! CTTCAATTAAGAGAAATGTA+AGG - chr2_2:9825226-9825245 Msa0236820:CDS 25.0%
! ATGGCTTATGATAAACTAAT+GGG - chr2_2:9825446-9825465 Msa0236820:intron 25.0%
!! AATCCATATTTGAAGTTGAA+TGG + chr2_2:9825555-9825574 None:intergenic 25.0%
!!! TTTTGTTGTGATTATTCTGT+AGG - chr2_2:9825675-9825694 Msa0236820:intron 25.0%
! CTATCAAATAAATCAACAGA+TGG + chr2_2:9825718-9825737 None:intergenic 25.0%
!!! GTTTTATTAAGTTGCATGTT+AGG - chr2_2:9825874-9825893 Msa0236820:CDS 25.0%
! TTGAAGAAAATATAGAGGAA+TGG - chr2_2:9825921-9825940 Msa0236820:CDS 25.0%
! TGAAGAAAATATAGAGGAAT+GGG - chr2_2:9825922-9825941 Msa0236820:CDS 25.0%
! TCCATATTAATTTCATCACT+CGG + chr2_2:9826160-9826179 None:intergenic 25.0%
! TATAACATCAAAAGTCATTG+AGG - chr2_2:9826186-9826205 Msa0236820:CDS 25.0%
! ACCTGAAAAAGTCTAATAAA+AGG - chr2_2:9826242-9826261 Msa0236820:CDS 25.0%
! CCTGAAAAAGTCTAATAAAA+GGG - chr2_2:9826243-9826262 Msa0236820:CDS 25.0%
! CTGAAAAAGTCTAATAAAAG+GGG - chr2_2:9826244-9826263 Msa0236820:CDS 25.0%
! TGAAAAAGTCTAATAAAAGG+GGG - chr2_2:9826245-9826264 Msa0236820:CDS 25.0%
!!! GTTTTGAACTCCTAATATAT+TGG + chr2_2:9826329-9826348 None:intergenic 25.0%
! ATATTAGGAGTTCAAAACAA+TGG - chr2_2:9826331-9826350 Msa0236820:CDS 25.0%
! ATATATGGTTATTTGAAGGA+TGG + chr2_2:9827113-9827132 None:intergenic 25.0%
! AGCTATATATGGTTATTTGA+AGG + chr2_2:9827117-9827136 None:intergenic 25.0%
!! TGTTTTATACATATGCATCA+GGG - chr2_2:9827207-9827226 Msa0236820:intron 25.0%
! ATCTTCAAAATACACATTTG+GGG + chr2_2:9827233-9827252 None:intergenic 25.0%
! CATCTTCAAAATACACATTT+GGG + chr2_2:9827234-9827253 None:intergenic 25.0%
! TCATCTTCAAAATACACATT+TGG + chr2_2:9827235-9827254 None:intergenic 25.0%
!!! ACAAAGTTTTAAATGTGGTT+TGG + chr2_2:9827431-9827450 None:intergenic 25.0%
!! AAACCACATTTAAAACTTTG+TGG - chr2_2:9827430-9827449 Msa0236820:intron 25.0%
!!! TAACCACAAAGTTTTAAATG+TGG + chr2_2:9827436-9827455 None:intergenic 25.0%
!!! ATGTTTTTTGCTATTGTGTT+GGG + chr2_2:9827587-9827606 None:intergenic 25.0%
!!! TATGTTTTTTGCTATTGTGT+TGG + chr2_2:9827588-9827607 None:intergenic 25.0%
!!! TTCTTTATGAAAGTACTTTG+AGG - chr2_2:9828289-9828308 Msa0236820:intron 25.0%
!!! TCTTTATGAAAGTACTTTGA+GGG - chr2_2:9828290-9828309 Msa0236820:intron 25.0%
! AAGTTTATGAAAATAAGGCA+CGG + chr2_2:9828384-9828403 None:intergenic 25.0%
! TTTGATGCAAATATATATGG+AGG - chr2_2:9828512-9828531 Msa0236820:intron 25.0%
!! TAACAAATGGTCAAAAGTAT+TGG + chr2_2:9828630-9828649 None:intergenic 25.0%
! TTAATTCACAAACTTATTGG+TGG - chr2_2:9828719-9828738 Msa0236820:intron 25.0%
!! ATAAAGGAAAAACACTGATT+TGG + chr2_2:9829153-9829172 None:intergenic 25.0%
! AAGGAAAAACACTGAAATAA+AGG + chr2_2:9829169-9829188 None:intergenic 25.0%
AGTGAAAGAAGAAAGAAGAA+GGG + chr2_2:9823709-9823728 None:intergenic 30.0%
TAGTGAAAGAAGAAAGAAGA+AGG + chr2_2:9823710-9823729 None:intergenic 30.0%
CAATTCATCGAAATTCGAAA+TGG - chr2_2:9823742-9823761 Msa0236820:three_prime_UTR 30.0%
ATTCATCGAAATTCGAAATG+GGG - chr2_2:9823744-9823763 Msa0236820:three_prime_UTR 30.0%
GAATTGAATTGATACCAGAT+TGG + chr2_2:9823803-9823822 None:intergenic 30.0%
TTAGGGTTTGATTCAGATTA+GGG + chr2_2:9824158-9824177 None:intergenic 30.0%
ATTAGGGTTTGATTCAGATT+AGG + chr2_2:9824159-9824178 None:intergenic 30.0%
!! GCTTCTGGAATCAATTTATT+CGG - chr2_2:9824263-9824282 Msa0236820:intron 30.0%
AGGGACCTATATAAATTAGT+GGG - chr2_2:9824627-9824646 Msa0236820:intron 30.0%
TTGACCCCACTAATTTATAT+AGG + chr2_2:9824635-9824654 None:intergenic 30.0%
AGAAACTTCGTATACTAACT+AGG - chr2_2:9824883-9824902 Msa0236820:intron 30.0%
! TTCTTTTCCGACTAAGAAAA+GGG - chr2_2:9825107-9825126 Msa0236820:intron 30.0%
GATGGCTTATGATAAACTAA+TGG - chr2_2:9825445-9825464 Msa0236820:intron 30.0%
AAGCCATTCAACTTCAAATA+TGG - chr2_2:9825549-9825568 Msa0236820:CDS 30.0%
AGATTGAATTGTTTACGCTT+TGG - chr2_2:9825635-9825654 Msa0236820:CDS 30.0%
!!! TTGATAGCGAGTTTTTTGAA+TGG - chr2_2:9825731-9825750 Msa0236820:intron 30.0%
TGGGACTTGAAAATAATTCA+GGG + chr2_2:9825774-9825793 None:intergenic 30.0%
ATGGGACTTGAAAATAATTC+AGG + chr2_2:9825775-9825794 None:intergenic 30.0%
! GTAATGAGAATTATTTTCGC+TGG - chr2_2:9825805-9825824 Msa0236820:intron 30.0%
ATCAGAACTTCTAATTTCAG+AGG + chr2_2:9826050-9826069 None:intergenic 30.0%
! AGAAGTTCTGATGATCTAAA+TGG - chr2_2:9826058-9826077 Msa0236820:CDS 30.0%
! GACAATTTAGTTCCCTAATA+AGG + chr2_2:9826138-9826157 None:intergenic 30.0%
TCCGAGTGATGAAATTAATA+TGG - chr2_2:9826156-9826175 Msa0236820:CDS 30.0%
!! CCCTTTTATTAGACTTTTTC+AGG + chr2_2:9826246-9826265 None:intergenic 30.0%
TGTACAGTCTCCAATATATT+AGG - chr2_2:9826316-9826335 Msa0236820:CDS 30.0%
!! TTCATCTCTAGGACTAAAAA+TGG - chr2_2:9826682-9826701 Msa0236820:CDS 30.0%
TCTTTGGATGAATCATTCAA+AGG + chr2_2:9826757-9826776 None:intergenic 30.0%
TATCTTGTCATCCTTATAGA+TGG - chr2_2:9826896-9826915 Msa0236820:CDS 30.0%
CAATTATTGGCAGCTATATA+TGG + chr2_2:9827128-9827147 None:intergenic 30.0%
! GTGTTTTATACATATGCATC+AGG - chr2_2:9827206-9827225 Msa0236820:intron 30.0%
AAAAACCACATTTGATTCTC+CGG + chr2_2:9827294-9827313 None:intergenic 30.0%
! AGAATCAAATGTGGTTTTTG+TGG - chr2_2:9827295-9827314 Msa0236820:intron 30.0%
CAAAAAACATACAGCTAAGA+AGG - chr2_2:9827597-9827616 Msa0236820:CDS 30.0%
!! TTCTTGGTTTTTGTAACTGT+AGG - chr2_2:9827791-9827810 Msa0236820:CDS 30.0%
!! TGAATTTGAAAGAGTGTTGA+AGG - chr2_2:9827824-9827843 Msa0236820:CDS 30.0%
ATCTGTTGATGCTATTACAT+GGG + chr2_2:9827883-9827902 None:intergenic 30.0%
ATAGCATCAACAGATGAAAA+TGG - chr2_2:9827888-9827907 Msa0236820:CDS 30.0%
TAGCATCAACAGATGAAAAT+GGG - chr2_2:9827889-9827908 Msa0236820:CDS 30.0%
ATTTAGATACTTGTTTCCCA+CGG - chr2_2:9828008-9828027 Msa0236820:intron 30.0%
TTACTATGACCTTAAAGTAG+TGG + chr2_2:9828036-9828055 None:intergenic 30.0%
!!! GTTGTTTTTTATTCTGGTGT+TGG - chr2_2:9828085-9828104 Msa0236820:intron 30.0%
!!! TTTTTTATTCTGGTGTTGGT+TGG - chr2_2:9828089-9828108 Msa0236820:intron 30.0%
GGCAATACATGATAGAAATT+TGG + chr2_2:9828410-9828429 None:intergenic 30.0%
TACTATGACTTCATCAAAGT+AGG - chr2_2:9828541-9828560 Msa0236820:intron 30.0%
ACTATGACTTCATCAAAGTA+GGG - chr2_2:9828542-9828561 Msa0236820:intron 30.0%
! GATTTTATCCCTTCATACAA+GGG - chr2_2:9828811-9828830 Msa0236820:CDS 30.0%
! TAGTAGGCAGTATTTCATTT+TGG + chr2_2:9828903-9828922 None:intergenic 30.0%
CTCAAGACTATAGATTATGA+GGG + chr2_2:9828941-9828960 None:intergenic 30.0%
! TAAATCCAATCCTTTGGAAA+AGG - chr2_2:9828969-9828988 Msa0236820:intron 30.0%
! AAAATTGCATCCTTTTCCAA+AGG + chr2_2:9828982-9829001 None:intergenic 30.0%
CCTATAAACTTTATTGAGCA+AGG + chr2_2:9829110-9829129 None:intergenic 30.0%
CCTTGCTCAATAAAGTTTAT+AGG - chr2_2:9829107-9829126 Msa0236820:exon 30.0%
TTCATCGAAATTCGAAATGG+GGG - chr2_2:9823745-9823764 Msa0236820:exon 35.0%
AATGGGGGATCTTGAAAAAA+TGG - chr2_2:9823760-9823779 Msa0236820:exon 35.0%
ATGGGGGATCTTGAAAAAAT+GGG - chr2_2:9823761-9823780 Msa0236820:exon 35.0%
! GTGAAGGGAATTTTACAAAC+AGG + chr2_2:9824083-9824102 None:intergenic 35.0%
AATGATAATTTGGGAGAGTG+AGG + chr2_2:9824117-9824136 None:intergenic 35.0%
GGTCACAATCTACAAAAACA+TGG - chr2_2:9824235-9824254 Msa0236820:intron 35.0%
! TATAAAAGAGGGTTCTAACC+TGG + chr2_2:9824317-9824336 None:intergenic 35.0%
CATATAACATGGTCACAAGA+AGG + chr2_2:9824518-9824537 None:intergenic 35.0%
TAGGTCCCTCATATATTTAG+CGG + chr2_2:9824616-9824635 None:intergenic 35.0%
GAGGGACCTATATAAATTAG+TGG - chr2_2:9824626-9824645 Msa0236820:intron 35.0%
GGGACCTATATAAATTAGTG+GGG - chr2_2:9824628-9824647 Msa0236820:intron 35.0%
TGTGAATTTCAAGCAATCAG+AGG - chr2_2:9824655-9824674 Msa0236820:CDS 35.0%
GTGAATTTCAAGCAATCAGA+GGG - chr2_2:9824656-9824675 Msa0236820:CDS 35.0%
CTATAGCAACGCATTATCTA+CGG + chr2_2:9824752-9824771 None:intergenic 35.0%
ATATGCTTACAGTGTGTCAT+CGG - chr2_2:9824787-9824806 Msa0236820:intron 35.0%
GTTACAGATGATGAAATGCA+AGG - chr2_2:9824910-9824929 Msa0236820:CDS 35.0%
GAAGAAACTTAAGACAAGCA+CGG - chr2_2:9825026-9825045 Msa0236820:CDS 35.0%
! CTTTTCTTAGTCGGAAAAGA+AGG + chr2_2:9825108-9825127 None:intergenic 35.0%
! CTTCTTTTCCGACTAAGAAA+AGG - chr2_2:9825106-9825125 Msa0236820:intron 35.0%
AAGAGAAATGTAAGGGCAAT+TGG - chr2_2:9825234-9825253 Msa0236820:CDS 35.0%
GGCAATTGGAAGTGAAAAAA+GGG - chr2_2:9825248-9825267 Msa0236820:CDS 35.0%
! AGGTGAAAGAACCATTCTTT+TGG - chr2_2:9825274-9825293 Msa0236820:CDS 35.0%
!! ACCATTCTTTTGGTTAAGAG+AGG - chr2_2:9825284-9825303 Msa0236820:CDS 35.0%
TCCTCTCTTAACCAAAAGAA+TGG + chr2_2:9825288-9825307 None:intergenic 35.0%
GACGAGGATCAAATTATTGA+AGG - chr2_2:9825339-9825358 Msa0236820:CDS 35.0%
!!! CCGATAGAGTTTGTTTTGAA+GGG + chr2_2:9825419-9825438 None:intergenic 35.0%
CCCTTCAAAACAAACTCTAT+CGG - chr2_2:9825416-9825435 Msa0236820:intron 35.0%
!!! ACCGATAGAGTTTGTTTTGA+AGG + chr2_2:9825420-9825439 None:intergenic 35.0%
AAACTCTATCGGTAAGTAGA+TGG - chr2_2:9825427-9825446 Msa0236820:intron 35.0%
AAGTTGAATGGCTTCAAACA+TGG + chr2_2:9825543-9825562 None:intergenic 35.0%
TGTGATTATTCTGTAGGATG+AGG - chr2_2:9825681-9825700 Msa0236820:intron 35.0%
GGGACTTGAAAATAATTCAG+GGG + chr2_2:9825773-9825792 None:intergenic 35.0%
AGAAAATATAGAGGAATGGG+TGG - chr2_2:9825925-9825944 Msa0236820:CDS 35.0%
TGAGAAGATCTGGAAAACAA+AGG - chr2_2:9826446-9826465 Msa0236820:CDS 35.0%
TTGAAGTTAAATCCTCAGGT+GGG + chr2_2:9826489-9826508 None:intergenic 35.0%
ATTGAAGTTAAATCCTCAGG+TGG + chr2_2:9826490-9826509 None:intergenic 35.0%
TGCATTGAAGTTAAATCCTC+AGG + chr2_2:9826493-9826512 None:intergenic 35.0%
TAGTCCTAGAGATGAATTCA+GGG + chr2_2:9826678-9826697 None:intergenic 35.0%
TTAGTCCTAGAGATGAATTC+AGG + chr2_2:9826679-9826698 None:intergenic 35.0%
CAAACTACAGTGATTCTCTT+TGG + chr2_2:9826773-9826792 None:intergenic 35.0%
AGAGAATCACTGTAGTTTGA+CGG - chr2_2:9826774-9826793 Msa0236820:CDS 35.0%
TAAGTTCCAGTCCATCTATA+AGG + chr2_2:9826910-9826929 None:intergenic 35.0%
CTTTATGCGATTCGAAATAC+AGG - chr2_2:9826930-9826949 Msa0236820:CDS 35.0%
TCATCAAAATAGTGCACCAT+TGG + chr2_2:9826964-9826983 None:intergenic 35.0%
CTGTGACAATGTATGACTTT+AGG + chr2_2:9827018-9827037 None:intergenic 35.0%
CTAAAGTCATACATTGTCAC+AGG - chr2_2:9827016-9827035 Msa0236820:intron 35.0%
AAGCAGAAATAAGTAGAAGC+CGG - chr2_2:9827272-9827291 Msa0236820:intron 35.0%
! TGTGGTTTTTGTGGACTTAA+AGG - chr2_2:9827304-9827323 Msa0236820:intron 35.0%
! AGATAGTACTGTTTCTCTTC+AGG - chr2_2:9827498-9827517 Msa0236820:CDS 35.0%
TTATATTACCTTCTCCTGCA+CGG + chr2_2:9827716-9827735 None:intergenic 35.0%
! GTTTTTGTAACTGTAGGAAG+TGG - chr2_2:9827797-9827816 Msa0236820:CDS 35.0%
!! AGGTTACAGTTCTGAAAACT+TGG - chr2_2:9827844-9827863 Msa0236820:CDS 35.0%
!! GGTTACAGTTCTGAAAACTT+GGG - chr2_2:9827845-9827864 Msa0236820:CDS 35.0%
CATCTGTTGATGCTATTACA+TGG + chr2_2:9827884-9827903 None:intergenic 35.0%
AGCATCAACAGATGAAAATG+GGG - chr2_2:9827890-9827909 Msa0236820:CDS 35.0%
AAGCTTGCATGAAAGAAACA+AGG - chr2_2:9828132-9828151 Msa0236820:intron 35.0%
AAGATTAAGAGCAGTGAACA+AGG - chr2_2:9828223-9828242 Msa0236820:intron 35.0%
!! CTGTCAGAACCTTTTTGTTT+TGG - chr2_2:9828349-9828368 Msa0236820:intron 35.0%
AGCTTCTTGTACATCTTGAA+TGG + chr2_2:9828431-9828450 None:intergenic 35.0%
TTGTAGCCATCAAAAAGCTT+TGG + chr2_2:9828775-9828794 None:intergenic 35.0%
TGGCTACAAGTTCTATTTCA+TGG - chr2_2:9828786-9828805 Msa0236820:CDS 35.0%
GGCTACAAGTTCTATTTCAT+GGG - chr2_2:9828787-9828806 Msa0236820:CDS 35.0%
! CGATTTTATCCCTTCATACA+AGG - chr2_2:9828810-9828829 Msa0236820:CDS 35.0%
GACTATAGATTATGAGGGTT+CGG + chr2_2:9828936-9828955 None:intergenic 35.0%
GCTCAAGACTATAGATTATG+AGG + chr2_2:9828942-9828961 None:intergenic 35.0%
!!! AGGATGCAATTTTTAGCCAA+AGG - chr2_2:9828989-9829008 Msa0236820:intron 35.0%
TGGATTCTGAATTCAATTGC+TGG - chr2_2:9829069-9829088 Msa0236820:intron 35.0%
!! AACACTGATTTGGAATCATG+TGG + chr2_2:9829143-9829162 None:intergenic 35.0%
GAGAACTCAAATGTCCAATC+TGG - chr2_2:9823786-9823805 Msa0236820:CDS 40.0%
CTGCACAATGAAGCAAGAAA+AGG + chr2_2:9823890-9823909 None:intergenic 40.0%
TCTTGCTTCATTGTGCAGTT+TGG - chr2_2:9823892-9823911 Msa0236820:CDS 40.0%
CTTGCTTCATTGTGCAGTTT+GGG - chr2_2:9823893-9823912 Msa0236820:CDS 40.0%
CTTGCAGAAAAGATGATTGC+AGG + chr2_2:9823945-9823964 None:intergenic 40.0%
AAAAACATGGAAGCTGCTTC+TGG - chr2_2:9824248-9824267 Msa0236820:intron 40.0%
AGGTCCCTCATATATTTAGC+GGG + chr2_2:9824615-9824634 None:intergenic 40.0%
!! GAGGGTATGTGTTGATTAGA+TGG - chr2_2:9824674-9824693 Msa0236820:CDS 40.0%
!! GGTATGTGTTGATTAGATGG+CGG - chr2_2:9824677-9824696 Msa0236820:CDS 40.0%
AACCTCTGATTGGTATACCA+AGG + chr2_2:9824712-9824731 None:intergenic 40.0%
ATCTACAGACAACCTCTGAT+TGG + chr2_2:9824722-9824741 None:intergenic 40.0%
GAGGTTGTCTGTAGATTAGA+TGG - chr2_2:9824726-9824745 Msa0236820:CDS 40.0%
ACAGATGATGAAATGCAAGG+TGG - chr2_2:9824913-9824932 Msa0236820:CDS 40.0%
TTCCTGGACTTCTTTCTTGT+GGG + chr2_2:9825009-9825028 None:intergenic 40.0%
GCTTGTCTTAAGTTTCTTCC+TGG + chr2_2:9825025-9825044 None:intergenic 40.0%
AAAGACTAGCAGGAAAAGTC+TGG - chr2_2:9825065-9825084 Msa0236820:intron 40.0%
! ACCTGAACCCTTTTCTTAGT+CGG + chr2_2:9825117-9825136 None:intergenic 40.0%
GTTTCCGAAAGAATGTCTTG+CGG + chr2_2:9825141-9825160 None:intergenic 40.0%
TTCTTTCGGAAACTCCACTA+AGG - chr2_2:9825148-9825167 Msa0236820:intron 40.0%
CCTGTCTTCAAATTCCTTAG+TGG + chr2_2:9825165-9825184 None:intergenic 40.0%
CCACTAAGGAATTTGAAGAC+AGG - chr2_2:9825162-9825181 Msa0236820:CDS 40.0%
CTAAGGAATTTGAAGACAGG+AGG - chr2_2:9825165-9825184 Msa0236820:CDS 40.0%
GGGCAATTGGAAGTGAAAAA+AGG - chr2_2:9825247-9825266 Msa0236820:CDS 40.0%
TGGAAGTGAAAAAAGGGATC+AGG - chr2_2:9825254-9825273 Msa0236820:CDS 40.0%
!! TCTTTGAGGTCACTGAATGA+AGG + chr2_2:9825381-9825400 None:intergenic 40.0%
TTTCATCATCAGCGTCTTTG+AGG + chr2_2:9825395-9825414 None:intergenic 40.0%
GGGTTATGCGAATAGTCATT+TGG - chr2_2:9825466-9825485 Msa0236820:intron 40.0%
GAAAATAATTCAGGGGAGCA+TGG + chr2_2:9825766-9825785 None:intergenic 40.0%
!! CTCATTACCTGCGTTTTGAT+GGG + chr2_2:9825793-9825812 None:intergenic 40.0%
! TCTCATTACCTGCGTTTTGA+TGG + chr2_2:9825794-9825813 None:intergenic 40.0%
! TTAAGTTGCATGTTAGGTGC+AGG - chr2_2:9825880-9825899 Msa0236820:CDS 40.0%
! ACCAACTTTGAGAATCCCAA+TGG - chr2_2:9825989-9826008 Msa0236820:CDS 40.0%
GAATCCCAATGGCAATCAAT+TGG - chr2_2:9826000-9826019 Msa0236820:CDS 40.0%
TCAGCCAATTGATTGCCATT+GGG + chr2_2:9826007-9826026 None:intergenic 40.0%
TTCAGCCAATTGATTGCCAT+TGG + chr2_2:9826008-9826027 None:intergenic 40.0%
CTAATTTCAGAGGACATGAC+TGG + chr2_2:9826040-9826059 None:intergenic 40.0%
AGAAGTCTACAAAGAGAAGC+AGG - chr2_2:9826086-9826105 Msa0236820:CDS 40.0%
GGAAGGCTAGAGAAAAATCT+AGG - chr2_2:9826107-9826126 Msa0236820:CDS 40.0%
AATCTAGGCAGGACCTTATT+AGG - chr2_2:9826122-9826141 Msa0236820:CDS 40.0%
ATCTAGGCAGGACCTTATTA+GGG - chr2_2:9826123-9826142 Msa0236820:CDS 40.0%
AGTCATTGAGGAGCAATCAT+TGG - chr2_2:9826198-9826217 Msa0236820:CDS 40.0%
GTCTAATAAAAGGGGGAAGA+AGG - chr2_2:9826252-9826271 Msa0236820:CDS 40.0%
TTGGAGACTGTACAAGCAAT+TGG + chr2_2:9826310-9826329 None:intergenic 40.0%
GAGTTCAAAACAATGGTGCT+AGG - chr2_2:9826338-9826357 Msa0236820:CDS 40.0%
!! CAATGTTCTGAGAAGATTGC+TGG - chr2_2:9826412-9826431 Msa0236820:CDS 40.0%
CTGAGAAGATTGCTGGAAAA+AGG - chr2_2:9826419-9826438 Msa0236820:CDS 40.0%
AAGATCTGGAAAACAAAGGC+TGG - chr2_2:9826450-9826469 Msa0236820:CDS 40.0%
AAAACAAAGGCTGGATGTTG+TGG - chr2_2:9826459-9826478 Msa0236820:CDS 40.0%
ATCTAGCAAGCTCTTTGCAT+TGG + chr2_2:9826519-9826538 None:intergenic 40.0%
! TTCATCCAGTTTAAGACAGC+AGG - chr2_2:9826543-9826562 Msa0236820:CDS 40.0%
! AACGCAAGGCATAGATTTTC+TGG + chr2_2:9826620-9826639 None:intergenic 40.0%
TTTCCCCTGAATTCATCTCT+AGG - chr2_2:9826671-9826690 Msa0236820:CDS 40.0%
AGTCCTAGAGATGAATTCAG+GGG + chr2_2:9826677-9826696 None:intergenic 40.0%
!! CTCTAGGACTAAAAATGGTG+AGG - chr2_2:9826687-9826706 Msa0236820:CDS 40.0%
CACATTGGTACTCTTTGACA+TGG + chr2_2:9826828-9826847 None:intergenic 40.0%
TGTCATCCTTATAGATGGAC+TGG - chr2_2:9826901-9826920 Msa0236820:CDS 40.0%
CCTTCAAAATCAGCAGTTAC+AGG + chr2_2:9826991-9827010 None:intergenic 40.0%
!!! CCTGTAACTGCTGATTTTGA+AGG - chr2_2:9826988-9827007 Msa0236820:intron 40.0%
TTCATGTTCCTTGTGCTAAG+TGG - chr2_2:9827368-9827387 Msa0236820:intron 40.0%
AACCATGAGCAATCTGACTT+TGG + chr2_2:9827657-9827676 None:intergenic 40.0%
!! GTTCTGAAAACTTGGGATTC+AGG - chr2_2:9827852-9827871 Msa0236820:CDS 40.0%
ATGAAAATGGGGCATGTAGA+AGG - chr2_2:9827901-9827920 Msa0236820:CDS 40.0%
!! AAGGACTCTCAAAGTATTGC+TGG - chr2_2:9827920-9827939 Msa0236820:CDS 40.0%
!! AGGACTCTCAAAGTATTGCT+GGG - chr2_2:9827921-9827940 Msa0236820:CDS 40.0%
!! CAAAGTATTGCTGGGTATTC+TGG - chr2_2:9827929-9827948 Msa0236820:CDS 40.0%
!!! TTGGTTGGTTTTTGCTAAGC+AGG - chr2_2:9828104-9828123 Msa0236820:intron 40.0%
!!! TGGTTGGTTTTTGCTAAGCA+GGG - chr2_2:9828105-9828124 Msa0236820:intron 40.0%
TCATAACGCTCTTCATCAAC+AGG + chr2_2:9828158-9828177 None:intergenic 40.0%
GAAGTTAATGTCGACATCCA+CGG - chr2_2:9828176-9828195 Msa0236820:intron 40.0%
TGCTCTTAATCTTCCAAGAC+GGG + chr2_2:9828216-9828235 None:intergenic 40.0%
CTGCTCTTAATCTTCCAAGA+CGG + chr2_2:9828217-9828236 None:intergenic 40.0%
AAGTGAGCAGTGAGAATTGT+AGG - chr2_2:9828566-9828585 Msa0236820:CDS 40.0%
!! AAGTATTGGCAGCTACAGAA+AGG + chr2_2:9828616-9828635 None:intergenic 40.0%
! CAGCAACCAAAGCTTTTTGA+TGG - chr2_2:9828766-9828785 Msa0236820:intron 40.0%
TCCTGCTAAATCCAATCCTT+TGG - chr2_2:9828963-9828982 Msa0236820:intron 40.0%
TCCAAAGGATTGGATTTAGC+AGG + chr2_2:9828967-9828986 None:intergenic 40.0%
! TGCATCCTTTTCCAAAGGAT+TGG + chr2_2:9828977-9828996 None:intergenic 40.0%
CTTGCAACCTTTGAACAAGT+AGG + chr2_2:9829042-9829061 None:intergenic 40.0%
CAAAGGTTGCAAGCAATACA+TGG - chr2_2:9829049-9829068 Msa0236820:intron 40.0%
ATTGCAGGTGAGTGAAACTG+CGG + chr2_2:9823930-9823949 None:intergenic 45.0%
AAAATTCCCTTCACTCGTCG+AGG - chr2_2:9824089-9824108 Msa0236820:CDS 45.0%
AAGTTGTCAATGTGAGGAGC+AGG + chr2_2:9824215-9824234 None:intergenic 45.0%
TGCTCCTCACATTGACAACT+TGG - chr2_2:9824214-9824233 Msa0236820:intron 45.0%
GTGACCAAGTTGTCAATGTG+AGG + chr2_2:9824221-9824240 None:intergenic 45.0%
! AGGGTTCTAACCTGGTGATT+TGG + chr2_2:9824309-9824328 None:intergenic 45.0%
TCGGACCCGCTAAATATATG+AGG - chr2_2:9824607-9824626 Msa0236820:intron 45.0%
CGGACCCGCTAAATATATGA+GGG - chr2_2:9824608-9824627 Msa0236820:intron 45.0%
TGCCTTGGTATACCAATCAG+AGG - chr2_2:9824707-9824726 Msa0236820:CDS 45.0%
GATGATGAAATGCAAGGTGG+AGG - chr2_2:9824916-9824935 Msa0236820:CDS 45.0%
CACTCATGAAAATCATGCCG+AGG - chr2_2:9824972-9824991 Msa0236820:CDS 45.0%
TCATGAAAATCATGCCGAGG+AGG - chr2_2:9824975-9824994 Msa0236820:CDS 45.0%
!!! TGTGGGTGTTTTTTCCTCCT+CGG + chr2_2:9824992-9825011 None:intergenic 45.0%
CTTCCTGGACTTCTTTCTTG+TGG + chr2_2:9825010-9825029 None:intergenic 45.0%
TAAGACAAGCACGGTAAGCT+TGG - chr2_2:9825035-9825054 Msa0236820:CDS 45.0%
TGGAGAAGCTAAAGACTAGC+AGG - chr2_2:9825055-9825074 Msa0236820:intron 45.0%
TCGGAAAAGAAGGCTTTGCA+CGG + chr2_2:9825098-9825117 None:intergenic 45.0%
TCCGACTAAGAAAAGGGTTC+AGG - chr2_2:9825113-9825132 Msa0236820:intron 45.0%
GGTTCCGCAAGACATTCTTT+CGG - chr2_2:9825134-9825153 Msa0236820:intron 45.0%
TGGTTAAGAGAGGAGCAAGA+TGG - chr2_2:9825294-9825313 Msa0236820:CDS 45.0%
GTTAAGTGCACAAACTGACG+AGG - chr2_2:9825323-9825342 Msa0236820:CDS 45.0%
AATGAAGGAGGAACTGGTGT+TGG + chr2_2:9825366-9825385 None:intergenic 45.0%
TCACTGAATGAAGGAGGAAC+TGG + chr2_2:9825372-9825391 None:intergenic 45.0%
TTGAGGTCACTGAATGAAGG+AGG + chr2_2:9825378-9825397 None:intergenic 45.0%
GCGAATAGTCATTTGGCACT+TGG - chr2_2:9825473-9825492 Msa0236820:CDS 45.0%
GTCATTTGGCACTTGGAAGT+TGG - chr2_2:9825480-9825499 Msa0236820:CDS 45.0%
TTCAAGTCCCATCAAAACGC+AGG - chr2_2:9825783-9825802 Msa0236820:intron 45.0%
GCCATTGGGATTCTCAAAGT+TGG + chr2_2:9825993-9826012 None:intergenic 45.0%
ATTTCAGAGGACATGACTGG+TGG + chr2_2:9826037-9826056 None:intergenic 45.0%
GTCTACAAAGAGAAGCAGGA+AGG - chr2_2:9826090-9826109 Msa0236820:CDS 45.0%
GGCTAGAGAAAAATCTAGGC+AGG - chr2_2:9826111-9826130 Msa0236820:CDS 45.0%
GAGACTGTACAAGCAATTGG+AGG + chr2_2:9826307-9826326 None:intergenic 45.0%
GAAGATTGCTGGAAAAAGGC+AGG - chr2_2:9826423-9826442 Msa0236820:CDS 45.0%
AAAAGGCAGGTGAGAAGATC+TGG - chr2_2:9826436-9826455 Msa0236820:CDS 45.0%
! ATCCAGTTTAAGACAGCAGG+TGG - chr2_2:9826546-9826565 Msa0236820:CDS 45.0%
ATCCACCTGCTGTCTTAAAC+TGG + chr2_2:9826551-9826570 None:intergenic 45.0%
CTATGCCTTGCGTTACAGAA+AGG - chr2_2:9826626-9826645 Msa0236820:CDS 45.0%
CTCTTCCTTTCTGTAACGCA+AGG + chr2_2:9826634-9826653 None:intergenic 45.0%
CCTTGCTTGGTACTTTCAGT+AGG + chr2_2:9826721-9826740 None:intergenic 45.0%
!! CCTACTGAAAGTACCAAGCA+AGG - chr2_2:9826718-9826737 Msa0236820:CDS 45.0%
CCTGACATCATTACCTTGCT+TGG + chr2_2:9826734-9826753 None:intergenic 45.0%
CCAAGCAAGGTAATGATGTC+AGG - chr2_2:9826731-9826750 Msa0236820:CDS 45.0%
! TGACGGCTCAACCAGTTTTA+AGG - chr2_2:9826791-9826810 Msa0236820:CDS 45.0%
! ACGAGAGACAGAAAGCACAT+TGG + chr2_2:9826843-9826862 None:intergenic 45.0%
TCTCTCGTCAGAAGAATCAG+AGG - chr2_2:9826855-9826874 Msa0236820:CDS 45.0%
CGATTCGAAATACAGGCTTC+TGG - chr2_2:9826937-9826956 Msa0236820:CDS 45.0%
AATACAGGCTTCTGGTCCAA+TGG - chr2_2:9826945-9826964 Msa0236820:CDS 45.0%
GTCACAGGAATTGCACAGAA+TGG - chr2_2:9827031-9827050 Msa0236820:intron 45.0%
AGAAGCCGGAGAATCAAATG+TGG - chr2_2:9827286-9827305 Msa0236820:intron 45.0%
!! GCTTTGAGAAAAGTTGTCGC+AGG - chr2_2:9827341-9827360 Msa0236820:intron 45.0%
TGGGATCCTGAACTTTCACA+CGG + chr2_2:9827568-9827587 None:intergenic 45.0%
GGCTAGTAGTGTCATGTTTG+CGG + chr2_2:9827636-9827655 None:intergenic 45.0%
AGCCAAAGTCAGATTGCTCA+TGG - chr2_2:9827652-9827671 Msa0236820:CDS 45.0%
AGTATTGCTGGGTATTCTGG+AGG - chr2_2:9827932-9827951 Msa0236820:CDS 45.0%
GTATTGCTGGGTATTCTGGA+GGG - chr2_2:9827933-9827952 Msa0236820:CDS 45.0%
TGTCGACATCCACGGAATTA+AGG - chr2_2:9828184-9828203 Msa0236820:intron 45.0%
GACATCCACGGAATTAAGGA+TGG - chr2_2:9828188-9828207 Msa0236820:intron 45.0%
GCTCTTAATCTTCCAAGACG+GGG + chr2_2:9828215-9828234 None:intergenic 45.0%
! AGGTTCTGACAGCAAACAGA+AGG + chr2_2:9828341-9828360 None:intergenic 45.0%
GCAGATAGCCCTTGTATGAA+GGG + chr2_2:9828822-9828841 None:intergenic 45.0%
TGCAGATAGCCCTTGTATGA+AGG + chr2_2:9828823-9828842 None:intergenic 45.0%
CTGCATAGAAAACCAGTGTC+AGG - chr2_2:9828874-9828893 Msa0236820:intron 45.0%
!! TCATTTTGGTCACCTGACAC+TGG + chr2_2:9828889-9828908 None:intergenic 45.0%
!! GTTCGGTGTTGATGCATAGT+AGG + chr2_2:9828919-9828938 None:intergenic 45.0%
!!! TATTTTATTTATTAAATTCT+TGG - chr2_2:9827775-9827794 Msa0236820:CDS 5.0%
!! CCTGGTGATTTGGTAGCAGT+TGG + chr2_2:9824299-9824318 None:intergenic 50.0%
CCAACTGCTACCAAATCACC+AGG - chr2_2:9824296-9824315 Msa0236820:intron 50.0%
TGATGCTGAGTCTGGTGAGA+AGG - chr2_2:9824939-9824958 Msa0236820:CDS 50.0%
GATGCTGAGTCTGGTGAGAA+GGG - chr2_2:9824940-9824959 Msa0236820:CDS 50.0%
CACCCACAAGAAAGAAGTCC+AGG - chr2_2:9825004-9825023 Msa0236820:CDS 50.0%
GAGAGGAGCAAGATGGTGAA+AGG - chr2_2:9825301-9825320 Msa0236820:CDS 50.0%
TGCATGTTAGGTGCAGGTTG+AGG - chr2_2:9825886-9825905 Msa0236820:CDS 50.0%
GGACTTAAAGGAGCTGCACT+CGG - chr2_2:9827316-9827335 Msa0236820:intron 50.0%
TCAGGAGTCCACTTAGCACA+AGG + chr2_2:9827379-9827398 None:intergenic 50.0%
!! TCCTGAGTGTCGATGGGATA+TGG - chr2_2:9827393-9827412 Msa0236820:intron 50.0%
ACCATATCCCATCGACACTC+AGG + chr2_2:9827397-9827416 None:intergenic 50.0%
TGAACTTTCACACGGCAGCA+AGG + chr2_2:9827560-9827579 None:intergenic 50.0%
TTGCTGCCGTGTGAAAGTTC+AGG - chr2_2:9827559-9827578 Msa0236820:CDS 50.0%
! TGGGTATTCTGGAGGGAAAG+TGG - chr2_2:9827940-9827959 Msa0236820:CDS 50.0%
CCTTAAAGTAGTGGCTCCGT+GGG + chr2_2:9828027-9828046 None:intergenic 50.0%
ACCTTAAAGTAGTGGCTCCG+TGG + chr2_2:9828028-9828047 None:intergenic 50.0%
ATTAAGGATGGTCCCCGTCT+TGG - chr2_2:9828200-9828219 Msa0236820:intron 50.0%
CAAGACCTTGTGATTGCTGC+TGG - chr2_2:9828841-9828860 Msa0236820:intron 50.0%
ACCTTGTGATTGCTGCTGGA+GGG - chr2_2:9828845-9828864 Msa0236820:intron 50.0%
GGCAAGGCCTACTTGTTCAA+AGG - chr2_2:9829032-9829051 Msa0236820:intron 50.0%
! GAGGTACCTCGACGAGTGAA+GGG + chr2_2:9824098-9824117 None:intergenic 55.0%
! TGAGGTACCTCGACGAGTGA+AGG + chr2_2:9824099-9824118 None:intergenic 55.0%
TGTTGTGGATGACCCACCTG+AGG - chr2_2:9826474-9826493 Msa0236820:CDS 55.0%
!! AGTGGACTCCTGAGTGTCGA+TGG - chr2_2:9827386-9827405 Msa0236820:intron 55.0%
!! GTGGACTCCTGAGTGTCGAT+GGG - chr2_2:9827387-9827406 Msa0236820:intron 55.0%
! GCAAGGAGGGAGCATGTAGA+GGG + chr2_2:9827543-9827562 None:intergenic 55.0%
! AGCAAGGAGGGAGCATGTAG+AGG + chr2_2:9827544-9827563 None:intergenic 55.0%
CTTTCACACGGCAGCAAGGA+GGG + chr2_2:9827556-9827575 None:intergenic 55.0%
ACTTTCACACGGCAGCAAGG+AGG + chr2_2:9827557-9827576 None:intergenic 55.0%
CCCACGGAGCCACTACTTTA+AGG - chr2_2:9828024-9828043 Msa0236820:intron 55.0%
GGGGACCATCCTTAATTCCG+TGG + chr2_2:9828196-9828215 None:intergenic 55.0%
GACCTTGTGATTGCTGCTGG+AGG - chr2_2:9828844-9828863 Msa0236820:intron 55.0%
TCCCTCCAGCAGCAATCACA+AGG + chr2_2:9828849-9828868 None:intergenic 55.0%
CCTCTGCATCACATCGCCTT+TGG + chr2_2:9829008-9829027 None:intergenic 55.0%
CCAAAGGCGATGTGATGCAG+AGG - chr2_2:9829005-9829024 Msa0236820:intron 55.0%
GCGATGTGATGCAGAGGCTT+TGG - chr2_2:9829011-9829030 Msa0236820:intron 55.0%
! GTGATGCAGAGGCTTTGGCA+AGG - chr2_2:9829016-9829035 Msa0236820:intron 55.0%
! GATGGCGGCAGAGAATGCCT+TGG - chr2_2:9824692-9824711 Msa0236820:CDS 60.0%
GGTGGAGGTGATGCTGAGTC+TGG - chr2_2:9824931-9824950 Msa0236820:CDS 60.0%
GAGTCTGGTGAGAAGGGAGC+TGG - chr2_2:9824946-9824965 Msa0236820:CDS 60.0%
TCTGGTGAGAAGGGAGCTGG+AGG - chr2_2:9824949-9824968 Msa0236820:CDS 60.0%
CTGTTCAGCTCTGTCCGTGC+AGG - chr2_2:9827699-9827718 Msa0236820:CDS 60.0%
AGCTCTGTCCGTGCAGGAGA+AGG - chr2_2:9827705-9827724 Msa0236820:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 9823665 9829218 9823665 ID=Msa0236820;Name=Msa0236820
chr2_2 mRNA 9823665 9829218 9823665 ID=Msa0236820-mRNA-1;Parent=Msa0236820;Name=Msa0236820-mRNA-1;_AED=0.08;_eAED=0.08;_QI=96|0.83|0.84|1|0.91|0.84|13|79|1037
chr2_2 exon 9823665 9823705 9823665 ID=Msa0236820-mRNA-1:exon:4267;Parent=Msa0236820-mRNA-1
chr2_2 exon 9823726 9824114 9823726 ID=Msa0236820-mRNA-1:exon:4266;Parent=Msa0236820-mRNA-1
chr2_2 exon 9824639 9824757 9824639 ID=Msa0236820-mRNA-1:exon:4265;Parent=Msa0236820-mRNA-1
chr2_2 exon 9824905 9825070 9824905 ID=Msa0236820-mRNA-1:exon:4264;Parent=Msa0236820-mRNA-1
chr2_2 exon 9825157 9825363 9825157 ID=Msa0236820-mRNA-1:exon:4263;Parent=Msa0236820-mRNA-1
chr2_2 exon 9825469 9825655 9825469 ID=Msa0236820-mRNA-1:exon:4262;Parent=Msa0236820-mRNA-1
chr2_2 exon 9825831 9826987 9825831 ID=Msa0236820-mRNA-1:exon:4261;Parent=Msa0236820-mRNA-1
chr2_2 exon 9827079 9827186 9827079 ID=Msa0236820-mRNA-1:exon:4260;Parent=Msa0236820-mRNA-1
chr2_2 exon 9827446 9827978 9827446 ID=Msa0236820-mRNA-1:exon:4259;Parent=Msa0236820-mRNA-1
chr2_2 exon 9828566 9828679 9828566 ID=Msa0236820-mRNA-1:exon:4258;Parent=Msa0236820-mRNA-1
chr2_2 exon 9828773 9828843 9828773 ID=Msa0236820-mRNA-1:exon:4257;Parent=Msa0236820-mRNA-1
chr2_2 exon 9828920 9828973 9828920 ID=Msa0236820-mRNA-1:exon:4256;Parent=Msa0236820-mRNA-1
chr2_2 exon 9829076 9829218 9829076 ID=Msa0236820-mRNA-1:exon:4255;Parent=Msa0236820-mRNA-1
chr2_2 five_prime_UTR 9829123 9829218 9829123 ID=Msa0236820-mRNA-1:five_prime_utr;Parent=Msa0236820-mRNA-1
chr2_2 CDS 9829076 9829122 9829076 ID=Msa0236820-mRNA-1:cds;Parent=Msa0236820-mRNA-1
chr2_2 CDS 9828920 9828973 9828920 ID=Msa0236820-mRNA-1:cds;Parent=Msa0236820-mRNA-1
chr2_2 CDS 9828773 9828843 9828773 ID=Msa0236820-mRNA-1:cds;Parent=Msa0236820-mRNA-1
chr2_2 CDS 9828566 9828679 9828566 ID=Msa0236820-mRNA-1:cds;Parent=Msa0236820-mRNA-1
chr2_2 CDS 9827446 9827978 9827446 ID=Msa0236820-mRNA-1:cds;Parent=Msa0236820-mRNA-1
chr2_2 CDS 9827079 9827186 9827079 ID=Msa0236820-mRNA-1:cds;Parent=Msa0236820-mRNA-1
chr2_2 CDS 9825831 9826987 9825831 ID=Msa0236820-mRNA-1:cds;Parent=Msa0236820-mRNA-1
chr2_2 CDS 9825469 9825655 9825469 ID=Msa0236820-mRNA-1:cds;Parent=Msa0236820-mRNA-1
chr2_2 CDS 9825157 9825363 9825157 ID=Msa0236820-mRNA-1:cds;Parent=Msa0236820-mRNA-1
chr2_2 CDS 9824905 9825070 9824905 ID=Msa0236820-mRNA-1:cds;Parent=Msa0236820-mRNA-1
chr2_2 CDS 9824639 9824757 9824639 ID=Msa0236820-mRNA-1:cds;Parent=Msa0236820-mRNA-1
chr2_2 CDS 9823764 9824114 9823764 ID=Msa0236820-mRNA-1:cds;Parent=Msa0236820-mRNA-1
chr2_2 three_prime_UTR 9823726 9823763 9823726 ID=Msa0236820-mRNA-1:three_prime_utr;Parent=Msa0236820-mRNA-1
chr2_2 three_prime_UTR 9823665 9823705 9823665 ID=Msa0236820-mRNA-1:three_prime_utr;Parent=Msa0236820-mRNA-1
Gene Sequence

>Msa0236820

ATGGGGGATCTTGAAAAAATGGGAAGAGAACTCAAATGTCCAATCTGTTTGGGTTTACTTCATTCCGCAGTTTCACTCACCTGCAATCATCTTTTCTGCAACTCTTGTATTTTTAAGTCTATGAAATCTGCTTCTTCTTGTCCTGTTTGTAAAATTCCCTTCACTCGTCGAGAGGTTCGTCCTGCTCCTCACATTGACAACTTGGTCACAATCTACAAAAACATGGAAGCTGCTTCTGGAATCAATTTATTCGGCACTCAAAATCCAACTGCTACCAAATCACCAGGTTATGTTACAGATGATGAAATGCAAGGTGGAGGTGATGCTGAGTCTGGTGAGAAGGGAGCTGGAGGCACTCATGAAAATCATGCCGAGGAGGAAAAAACACCCACAAGAAAGAAGTCCAGGAAGAAACTTAAGACAAGCACGGTAAGCTTGGAGAAGCTAAAGACTAGCAGGAAAAGTCTGGCTTCTAACCGTGCAAAGCCTTCTTTTCCGACTAAGAAAAGGGTTCAGGTTCCGCAAGACATTCTTTCGGAAACTCCACTAAGGAATTTGAAGACAGGAGGATCTATTACTCAAGTTAACATAGAGGGAACACAAGATGCTTCAATTAAGAGAAATGTAAGGGCAATTGGAAGTGAAAAAAGGGATCAGGTGAAAGAACCATTCTTTTGGTTAAGAGAGGAGCAAGATGGTGAAAGGTTAAGTGCACAAACTGACGAGGATCAAATTATTGAAGGTCCAACACCAGTTCCTCCTTCATTCAGTGACCTCAAAGACGCTGATGATGAAAGCCCTTCAAAACAAACTCTATCGGATGAGGTGCAAAATAAACCATCTGTTGATTTATTTGATAGCGAGTTTTTTGAATGGACGCAAAAGCCATGCTCCCCTGAATTATTTTCAAGTCCCATCAAAACGCAGGTGCAGGTTGAGGACACTGATGAAATTGAAGAAAATATAGAGGAATGGGTGGCAGCGTCGCAAGAGAATCAAACAAGTGTTGATGCTTGTAATACCAACTTTGAGAATCCCAATGGCAATCAATTGGCTGAAGCGTTGCCACCAGTCATGTCCTCTGAAATTAGAAGTTCTGATGATCTAAATGGAAAAAAGAAGTCTACAAAGAGAAGCAGGAAGGCTAGAGAAAAATCTAGGCAGGACCTTATTAGGGAACTAAATTGTCCGAGTGATGAAATTAATATGGATGCAGATATAACATCAAAAGTCATTGAGGAGCAATCATTGGACTACAAGCACAAAGCTTCTAACCTGAAAAAGTCTAATAAAAGGGGGAAGAAGGTTTCTTTTGTTACTAGTACAGAATCAACACCTCCAATTGCTTGTACAGTCTCCAATATATTAGGAGTTCAAAACAATGGTGCTAGGAAGACAGCTAAGAGTTCATATACTTCAGAATCTAAACAACATAATGAGATGCAATGTTCTGAGAAGATTGCTGGAAAAAGGCAGGTGAGAAGATCTGGAAAACAAAGGCTGGATGTTGTGGATGACCCACCTGAGGATTTAACTTCAATGCAAAACCAATGCAAAGAGCTTGCTAGATCTGCTTCATCCAGTTTAAGACAGCAGGTGGATAGTAATAGAAACACTGTCAATACTAGAAAACGAAAAAGCAGTTTGTCCAGAAAATCTATGCCTTGCGTTACAGAAAGGAAGAGTACTAAAAAGTCAAAACTTTCCCCTGAATTCATCTCTAGGACTAAAAATGGTGAGGAAATTAAGCCTACTGAAAGTACCAAGCAAGGTAATGATGTCAGGCCTTTGAATGATTCATCCAAAGAGAATCACTGTAGTTTGACGGCTCAACCAGTTTTAAGGAAATGTTTTATCCATGTCAAAGAGTACCAATGTGCTTTCTGTCTCTCGTCAGAAGAATCAGAGGTAAAATTGTTTGCTTGCTTATCTTGTCATCCTTATAGATGGACTGGAACTTACTTTATGCGATTCGAAATACAGGCTTCTGGTCCAATGGTGCACTATTTTGATGAAAAACCTGTAACTGCTGATTTTGAAGGAGAACCTAAAGTCATACATTGTCACAGGAATTGCACAGAATGGGCCCCAAATGTGTATTTTGAAGATGATAATGCAATAAATCTTGAAGCAGAAATAAGTAGAAGCCGGAGAATCAAATGTGGTTTTTGTGGACTTAAAGGAGCTGCACTCGGTTGCTTTGAGAAAAGTTGTCGCAGGAGCTTTCATGTTCCTTGTGCTAAGTGGACTCCTGAGTGTCGATGGGATATGGAAAATTTTGTCATGTTATGCCCTCTACATGCTCCCTCCTTGCTGCCGTGTGAAAGTTCAGGATCCCAACACAATAGCAAAAAACATACAGCTAAGAAGGTTAAAATCTGTAGCCGCAAACATGACACTACTAGCCAAAGTCAGATTGCTCATGGTTCTCACAAGAAAATTGTGCTGTGCTGTTCAGCTCTGTCCGTGCAGGAGAAGGAAGTGGTTTCTGAATTTGAAAGAGTGTTGAAGGTTACAGTTCTGAAAACTTGGGATTCAGGTGTTACCCATGTAATAGCATCAACAGATGAAAATGGGGCATGTAGAAGGACTCTCAAAGTATTGCTGGGTATTCTGGAGGGAAAGTGGATTCTCAGCATTGACTGGATCAAAGCTTGCATGAAAGAAACAAGGCCTGTTGATGAAGAGCGTTATGAAGTTAATGTCGACATCCACGGAATTAAGGATGGTCCCCGTCTTGGAAGATTAAGAGCAGTGAACAAGCAACCAAAGCTTTTTGATGGCTACAAGTTCTATTTCATGGGCGATTTTATCCCTTCATACAAGGGCTATCTGCAAGACCTTGTGATTGCTGCTGGAGGGATAGTTCTGCATAGAAAACCAGTGTCAGGTGACCAAAATGAAATACTGCCTACTATGCATCAACACCGAACCCTCATAATCTATAGTCTTGAGCTTCCTGCTAAATCCAATCCTTTGGAAAAGGATGCAATTTTTAGCCAAAGGCGATGTGATGCAGAGGCTTTGGCAAGGCCTACTTGTTCAAAGGTTGCAAGCAATACATGGATTCTGAATTCAATTGCTGGCTGCAAGCTGCAAAGCCTTGCTCAATAA
Protein sequence

>Msa0236820

MGDLEKMGRELKCPICLGLLHSAVSLTCNHLFCNSCIFKSMKSASSCPVCKIPFTRREVRPAPHIDNLVTIYKNMEAASGINLFGTQNPTATKSPGYVTDDEMQGGGDAESGEKGAGGTHENHAEEEKTPTRKKSRKKLKTSTVSLEKLKTSRKSLASNRAKPSFPTKKRVQVPQDILSETPLRNLKTGGSITQVNIEGTQDASIKRNVRAIGSEKRDQVKEPFFWLREEQDGERLSAQTDEDQIIEGPTPVPPSFSDLKDADDESPSKQTLSDEVQNKPSVDLFDSEFFEWTQKPCSPELFSSPIKTQVQVEDTDEIEENIEEWVAASQENQTSVDACNTNFENPNGNQLAEALPPVMSSEIRSSDDLNGKKKSTKRSRKAREKSRQDLIRELNCPSDEINMDADITSKVIEEQSLDYKHKASNLKKSNKRGKKVSFVTSTESTPPIACTVSNILGVQNNGARKTAKSSYTSESKQHNEMQCSEKIAGKRQVRRSGKQRLDVVDDPPEDLTSMQNQCKELARSASSSLRQQVDSNRNTVNTRKRKSSLSRKSMPCVTERKSTKKSKLSPEFISRTKNGEEIKPTESTKQGNDVRPLNDSSKENHCSLTAQPVLRKCFIHVKEYQCAFCLSSEESEVKLFACLSCHPYRWTGTYFMRFEIQASGPMVHYFDEKPVTADFEGEPKVIHCHRNCTEWAPNVYFEDDNAINLEAEISRSRRIKCGFCGLKGAALGCFEKSCRRSFHVPCAKWTPECRWDMENFVMLCPLHAPSLLPCESSGSQHNSKKHTAKKVKICSRKHDTTSQSQIAHGSHKKIVLCCSALSVQEKEVVSEFERVLKVTVLKTWDSGVTHVIASTDENGACRRTLKVLLGILEGKWILSIDWIKACMKETRPVDEERYEVNVDIHGIKDGPRLGRLRAVNKQPKLFDGYKFYFMGDFIPSYKGYLQDLVIAAGGIVLHRKPVSGDQNEILPTMHQHRTLIIYSLELPAKSNPLEKDAIFSQRRCDAEALARPTCSKVASNTWILNSIAGCKLQSLAQ*