AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0300680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0300680 MtrunA17_Chr2g0325831 95.556 135 1 1 1 130 1 135 4.96e-94 270
Msa0300680 MtrunA17_Chr4g0041141 83.333 132 16 2 5 130 10 141 3.31e-79 233
Msa0300680 MtrunA17_Chr2g0315791 74.483 145 22 2 1 130 1 145 5.90e-75 222
Msa0300680 MtrunA17_Chr2g0283861 75.000 128 24 2 11 130 20 147 5.55e-67 202
Msa0300680 MtrunA17_Chr5g0431211 66.667 123 36 1 20 137 34 156 4.65e-58 181
Msa0300680 MtrunA17_Chr4g0051251 62.879 132 38 2 21 141 44 175 7.80e-57 177
Msa0300680 MtrunA17_Chr1g0167411 72.566 113 26 1 23 130 65 177 2.34e-56 176
Msa0300680 MtrunA17_Chr8g0379061 80.000 115 18 1 21 130 83 197 1.22e-55 175
Msa0300680 MtrunA17_Chr7g0274631 59.028 144 43 5 12 141 16 157 1.66e-52 164
Msa0300680 MtrunA17_Chr1g0187671 66.917 133 33 2 20 141 50 182 1.80e-51 163
Msa0300680 MtrunA17_Chr7g0261381 67.939 131 31 2 22 141 63 193 4.86e-50 160
Msa0300680 MtrunA17_Chr1g0183761 67.692 130 31 2 23 141 45 174 2.29e-49 158
Msa0300680 MtrunA17_Chr3g0105921 64.662 133 42 1 10 137 29 161 1.59e-48 156
Msa0300680 MtrunA17_Chr1g0190231 71.681 113 27 1 23 130 40 152 1.05e-46 150
Msa0300680 MtrunA17_Chr1g0211641 64.444 45 13 1 12 56 63 104 8.76e-13 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0300680 AT2G42610.1 80.916 131 19 2 5 130 8 137 1.53e-73 218
Msa0300680 AT2G42610.2 80.916 131 19 2 5 130 8 137 1.53e-73 218
Msa0300680 AT1G78815.1 72.414 116 27 1 20 130 37 152 9.75e-60 184
Msa0300680 AT1G07090.1 60.870 138 43 2 15 141 23 160 5.01e-58 180
Msa0300680 AT4G18610.1 71.304 115 27 2 22 130 36 150 1.08e-56 176
Msa0300680 AT1G16910.1 64.394 132 36 2 20 140 20 151 2.61e-56 174
Msa0300680 AT5G58500.1 62.879 132 37 3 22 141 18 149 3.28e-55 172
Msa0300680 AT2G31160.1 68.462 130 30 2 23 141 54 183 1.17e-50 162
Msa0300680 AT3G23290.2 73.913 115 25 1 21 130 46 160 5.11e-50 159
Msa0300680 AT3G04510.1 61.765 136 41 2 23 147 33 168 4.09e-48 155
Msa0300680 AT5G28490.1 65.909 132 34 2 22 142 24 155 6.96e-48 154

Find 66 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCCATTTAAATGTTATTT+TGG 0.081914 2_3:+56174733 Msa0300680:three_prime_UTR
CTAAATGTGCTCACAATATT+TGG 0.156346 2_3:-56174767 None:intergenic
CTTAGGTATTTAGATCAATT+TGG 0.234689 2_3:+56169738 Msa0300680:intron
GGAGGTTTGGCTTTCTATAT+TGG 0.240013 2_3:+56174503 Msa0300680:three_prime_UTR
AAATAACATTTAAATGGAAT+TGG 0.248639 2_3:-56174730 None:intergenic
GGAAGCCTTGATGCTCTTAT+TGG 0.251412 2_3:+56169849 Msa0300680:CDS
AACCCAAAATAACATTTAAA+TGG 0.262361 2_3:-56174736 None:intergenic
ATGCTCTTATTGGGAGGTTA+AGG 0.286320 2_3:+56169859 Msa0300680:CDS
AGAAGAGATTGGAACACTTT+TGG 0.305989 2_3:+56169645 Msa0300680:CDS
TGTAACATGTATAATCAAAT+TGG 0.325648 2_3:+56174451 Msa0300680:three_prime_UTR
GAAGCCTTGATGCTCTTATT+GGG 0.358150 2_3:+56169850 Msa0300680:CDS
CTTTACAAGAGGCACTCTAA+TGG 0.379614 2_3:+56174482 Msa0300680:three_prime_UTR
TGCTCTTATTGGGAGGTTAA+GGG 0.383201 2_3:+56169860 Msa0300680:CDS
GTACAAGGTGCTGGTGGCTC+TGG 0.394151 2_3:-56169804 None:intergenic
ATTAATCAATTACCATTACT+TGG 0.394299 2_3:-56170074 None:intergenic
GTTTGGCTTTCTATATTGGA+TGG 0.396772 2_3:+56174507 Msa0300680:three_prime_UTR
ATGTCCACTTAGACAAGCTT+GGG 0.408374 2_3:+56169827 Msa0300680:CDS
TCAATTACCATTACTTGGAA+TGG 0.408963 2_3:-56170069 None:intergenic
AATAACATTTAAATGGAATT+GGG 0.419550 2_3:-56174729 None:intergenic
AAAGTGGAACGGGTGGTCTA+AGG 0.420057 2_3:-56169683 None:intergenic
GAGGCACTCTAATGGAGGTT+TGG 0.424952 2_3:+56174490 Msa0300680:three_prime_UTR
AATCTCAAAAGAGAAGAGAT+TGG 0.439992 2_3:+56169634 Msa0300680:CDS
TGAATTTCCATTCCAAGTAA+TGG 0.440291 2_3:+56170062 Msa0300680:CDS
ACAACCTTGTAAGTGAACTT+TGG 0.477909 2_3:-56169766 None:intergenic
TATAACCGTTGGTTATGCCT+TGG 0.490921 2_3:+56174618 Msa0300680:three_prime_UTR
TTGCAGTGAGAAAGTGGAAC+GGG 0.495114 2_3:-56169693 None:intergenic
CTTCCCCAAGCTTGTCTAAG+TGG 0.503711 2_3:-56169831 None:intergenic
CATGTCCACTTAGACAAGCT+TGG 0.511810 2_3:+56169826 Msa0300680:CDS
AAAACCAAAGTTCACTTACA+AGG 0.520249 2_3:+56169762 Msa0300680:CDS
GGGAGTGTCAAGCTAAGGCT+AGG 0.530004 2_3:+56169964 Msa0300680:intron
TTTGGCTTTCTATATTGGAT+GGG 0.539250 2_3:+56174508 Msa0300680:three_prime_UTR
ATATTGGATGGGTAAAGTGT+TGG 0.541145 2_3:+56174519 Msa0300680:three_prime_UTR
AAACCAAATATGTCTTCAAG+TGG 0.542706 2_3:+56169552 None:intergenic
AAGAAATTCCAACACATGGT+TGG 0.545252 2_3:-56169718 None:intergenic
GAGGTTAAGGGCTGCATATG+AGG 0.551450 2_3:+56169872 Msa0300680:CDS
TGTCTAAGTGGACATGTACA+AGG 0.553070 2_3:-56169819 None:intergenic
TGAGGAAAACGGTGGAACTC+CGG 0.553996 2_3:+56169890 Msa0300680:CDS
TGGAGTTCTTTCTTTACAAG+AGG 0.558890 2_3:+56174471 Msa0300680:three_prime_UTR
AGTGGAAAGGATTTAGCTGA+AGG 0.563487 2_3:+56169570 Msa0300680:CDS
GGAGTGTCAAGCTAAGGCTA+GGG 0.568004 2_3:+56169965 Msa0300680:intron
AAATATGTCTTCAAGTGGAA+AGG 0.571184 2_3:+56169557 None:intergenic
CTCGCGAAAGGATTAGTCTC+CGG 0.573225 2_3:-56169909 None:intergenic
AGGGCTGCATATGAGGAAAA+CGG 0.576049 2_3:+56169879 Msa0300680:CDS
TAAACTCATTATATAACCGT+TGG 0.576864 2_3:+56174607 Msa0300680:three_prime_UTR
CGAATAGCACCGCTCGCGAA+AGG 0.579160 2_3:-56169921 None:intergenic
TTGGAATTGCAGTGAGAAAG+TGG 0.579943 2_3:-56169699 None:intergenic
GGAGGATCATCAACCTCGCA+AGG 0.584784 2_3:+56169591 Msa0300680:CDS
TACAAGAGGCACTCTAATGG+AGG 0.587693 2_3:+56174485 Msa0300680:three_prime_UTR
GCCTTGATGCTCTTATTGGG+AGG 0.590380 2_3:+56169853 Msa0300680:CDS
GCTAAGTGTGATTCCTTGCG+AGG 0.590859 2_3:-56169604 None:intergenic
ACCTCCCAATAAGAGCATCA+AGG 0.595384 2_3:-56169854 None:intergenic
AGTGGACATGTACAAGGTGC+TGG 0.597857 2_3:-56169813 None:intergenic
TTATATAATGAGTTTAGACT+AGG 0.603664 2_3:-56174600 None:intergenic
TATTCGCGTTTATCTTAGAG+AGG 0.607515 2_3:+56169938 Msa0300680:CDS
GGAAATTCAAGAAAAGTGCA+TGG 0.626006 2_3:-56170048 None:intergenic
GGAAAGGATTTAGCTGAAGG+AGG 0.626283 2_3:+56169573 Msa0300680:CDS
GAGACTAATCCTTTCGCGAG+CGG 0.631568 2_3:+56169912 Msa0300680:CDS
CAGTGAGAAAGTGGAACGGG+TGG 0.652107 2_3:-56169690 None:intergenic
CAGAAAATAACATTAAAGAG+TGG 0.663739 2_3:-56174546 None:intergenic
GAGTGTCAAGCTAAGGCTAG+GGG 0.673844 2_3:+56169966 Msa0300680:intron
TTCGAATGCAACATAGACCA+AGG 0.674490 2_3:-56174635 None:intergenic
ATAGACCAAGGCATAACCAA+CGG 0.700889 2_3:-56174623 None:intergenic
GGACATGTACAAGGTGCTGG+TGG 0.708995 2_3:-56169810 None:intergenic
TGTCCACTTAGACAAGCTTG+GGG 0.716611 2_3:+56169828 Msa0300680:CDS
ATTGCAGTGAGAAAGTGGAA+CGG 0.719471 2_3:-56169694 None:intergenic
GCTGCATATGAGGAAAACGG+TGG 0.735412 2_3:+56169882 Msa0300680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATATTAAAAAAATTT+AGG + chr2_3:56172703-56172722 Msa0300680:intron 0.0%
!! AAAAATATTAAAAAAATTTA+GGG + chr2_3:56172704-56172723 Msa0300680:intron 0.0%
!!! TATTAAAAAGTATTTTATGT+TGG - chr2_3:56171658-56171677 None:intergenic 10.0%
!!! TTTTGATTATGTTTTAATTT+TGG + chr2_3:56171797-56171816 Msa0300680:intron 10.0%
!!! TTTGATTATGTTTTAATTTT+GGG + chr2_3:56171798-56171817 Msa0300680:intron 10.0%
!! TAAATTAAAATGTTTAACAT+TGG + chr2_3:56172472-56172491 Msa0300680:intron 10.0%
!! AAATTAAAATGTTTAACATT+GGG + chr2_3:56172473-56172492 Msa0300680:intron 10.0%
!!! CATATATTATATTTTCAATT+TGG - chr2_3:56172567-56172586 None:intergenic 10.0%
!! AAATATTAAAAAAATTTAGG+GGG + chr2_3:56172706-56172725 Msa0300680:intron 10.0%
!! ATATATATATATATATAGTG+GGG - chr2_3:56173200-56173219 None:intergenic 10.0%
!!! TCAATTTATGTTTTTTTTTA+GGG + chr2_3:56174318-56174337 Msa0300680:intron 10.0%
!! GCTAAATATAAATATATAGT+TGG - chr2_3:56170380-56170399 None:intergenic 15.0%
!! AGGATAATATTAGTAAAATA+AGG - chr2_3:56171597-56171616 None:intergenic 15.0%
!!! GATGTTTTTATTTAATTTCA+TGG + chr2_3:56171710-56171729 Msa0300680:intron 15.0%
!! CAAAATTATAAGAAATTTCA+AGG + chr2_3:56172667-56172686 Msa0300680:intron 15.0%
!! CATGCAAATATATTTAATTA+AGG - chr2_3:56172842-56172861 None:intergenic 15.0%
!!! TATTTATAGCATATTTTGAT+AGG - chr2_3:56173821-56173840 None:intergenic 15.0%
!! AATATGCTATAAATAGATAT+TGG + chr2_3:56173826-56173845 Msa0300680:intron 15.0%
!!! CTCAATTTATGTTTTTTTTT+AGG + chr2_3:56174317-56174336 Msa0300680:intron 15.0%
!! AATAACATTTAAATGGAATT+GGG - chr2_3:56174732-56174751 None:intergenic 15.0%
!! AAATAACATTTAAATGGAAT+TGG - chr2_3:56174733-56174752 None:intergenic 15.0%
!!! ATTCCATTTAAATGTTATTT+TGG + chr2_3:56174733-56174752 Msa0300680:three_prime_UTR 15.0%
!!! TTCCATTTAAATGTTATTTT+GGG + chr2_3:56174734-56174753 Msa0300680:three_prime_UTR 15.0%
!! ATTAATCAATTACCATTACT+TGG - chr2_3:56170077-56170096 None:intergenic 20.0%
!!! TAATTAATGTCTGTTCTTTT+CGG - chr2_3:56170678-56170697 None:intergenic 20.0%
!!! TGTATATGTTTTCATTGTTA+TGG - chr2_3:56170729-56170748 None:intergenic 20.0%
!! ACTTCTCATAATTATTTAAG+TGG - chr2_3:56170880-56170899 None:intergenic 20.0%
!! CTTAAATAATTATGAGAAGT+TGG + chr2_3:56170880-56170899 Msa0300680:intron 20.0%
!! TTTCATGATGTTTAAATTTC+AGG + chr2_3:56171742-56171761 Msa0300680:intron 20.0%
!! CATGAAATTAATTCATATAC+TGG + chr2_3:56172279-56172298 Msa0300680:intron 20.0%
!!! TTTTACTGATGTAAATGTTA+TGG - chr2_3:56172332-56172351 None:intergenic 20.0%
!! AACAAAATATCATGTTAGAA+GGG - chr2_3:56172375-56172394 None:intergenic 20.0%
!! ATCTTAAAAAGGCTAAATTA+GGG - chr2_3:56172874-56172893 None:intergenic 20.0%
!! AATCTTAAAAAGGCTAAATT+AGG - chr2_3:56172875-56172894 None:intergenic 20.0%
!! CTGCTAATATTAAACTAATT+TGG - chr2_3:56173045-56173064 None:intergenic 20.0%
!!! TTCTGTATATTCGTATTTTA+TGG - chr2_3:56173445-56173464 None:intergenic 20.0%
!!! TTTTCTTGTTTGTAATGATT+TGG + chr2_3:56173526-56173545 Msa0300680:intron 20.0%
!!! TTAGAAGTTTTTGACAATAA+AGG - chr2_3:56173682-56173701 None:intergenic 20.0%
!!! AAGAGTTTATTTTTACTCAT+TGG + chr2_3:56173726-56173745 Msa0300680:intron 20.0%
!!! TCAATTTCTTATTTCTTCAA+CGG - chr2_3:56173947-56173966 None:intergenic 20.0%
!! TGTAACATGTATAATCAAAT+TGG + chr2_3:56174451-56174470 Msa0300680:three_prime_UTR 20.0%
!! TTATATAATGAGTTTAGACT+AGG - chr2_3:56174603-56174622 None:intergenic 20.0%
!! AACCCAAAATAACATTTAAA+TGG - chr2_3:56174739-56174758 None:intergenic 20.0%
! CTTAGGTATTTAGATCAATT+TGG + chr2_3:56169738-56169757 Msa0300680:intron 25.0%
!! TTACAAGGTTGTATGTTTTA+TGG + chr2_3:56169777-56169796 Msa0300680:CDS 25.0%
!! TCTTCTTTTTCTTCTTGTAA+GGG - chr2_3:56169995-56170014 None:intergenic 25.0%
!! AAAAAGAAGAGCACAAATAA+GGG + chr2_3:56170005-56170024 Msa0300680:CDS 25.0%
! AGATGATATTAACTCAAATG+AGG + chr2_3:56170144-56170163 Msa0300680:intron 25.0%
!! GATTCATAGCAATAAGTTTT+AGG - chr2_3:56170217-56170236 None:intergenic 25.0%
! ATGAATCTCTAATATGATCT+TGG + chr2_3:56170230-56170249 Msa0300680:intron 25.0%
! ACCTATTACAACATGTTTAT+TGG + chr2_3:56170277-56170296 Msa0300680:intron 25.0%
! TCCAATAAACATGTTGTAAT+AGG - chr2_3:56170281-56170300 None:intergenic 25.0%
! TTGGCTGTATTTAATTAAGT+TGG - chr2_3:56170361-56170380 None:intergenic 25.0%
!! GGGAGTAATTTTTCTAATTT+GGG - chr2_3:56170431-56170450 None:intergenic 25.0%
!! AGGGAGTAATTTTTCTAATT+TGG - chr2_3:56170432-56170451 None:intergenic 25.0%
! TAAGTGGTATATTGTTCATT+TGG - chr2_3:56170466-56170485 None:intergenic 25.0%
!! TTTTGCAAATATCAAATGTG+AGG - chr2_3:56170501-56170520 None:intergenic 25.0%
!! CTTAACTTGATATAGCAAAT+CGG - chr2_3:56170765-56170784 None:intergenic 25.0%
! AATATATATAAACAAACCCC+TGG - chr2_3:56170840-56170859 None:intergenic 25.0%
! AAAAAAAACTTACGTGTTGT+TGG + chr2_3:56171026-56171045 Msa0300680:intron 25.0%
! TATTAGTAAAATAAGGAGTG+TGG - chr2_3:56171590-56171609 None:intergenic 25.0%
!!! TGTTTTAATTTCAGTTTGCA+TGG + chr2_3:56171766-56171785 Msa0300680:intron 25.0%
!!! TAATTTTGGGATGTTCTTTT+TGG + chr2_3:56171811-56171830 Msa0300680:intron 25.0%
!! GATTGAAATATTTGAGTTTG+AGG + chr2_3:56171879-56171898 Msa0300680:intron 25.0%
!!! GTTTCTTTTTTGAAAAACAG+TGG + chr2_3:56172127-56172146 Msa0300680:intron 25.0%
!! AAATTGACCACTGAATTTTA+GGG - chr2_3:56172238-56172257 None:intergenic 25.0%
!! AAAATTGACCACTGAATTTT+AGG - chr2_3:56172239-56172258 None:intergenic 25.0%
! ACAAAATATCATGTTAGAAG+GGG - chr2_3:56172374-56172393 None:intergenic 25.0%
! CAACAAAATATCATGTTAGA+AGG - chr2_3:56172376-56172395 None:intergenic 25.0%
! TGTGTGTAAAACTTTATACA+CGG + chr2_3:56172399-56172418 Msa0300680:intron 25.0%
!!! CTGTTTTTGTGATTATTGTA+TGG - chr2_3:56172780-56172799 None:intergenic 25.0%
! CATACAATAATCACAAAAAC+AGG + chr2_3:56172778-56172797 Msa0300680:intron 25.0%
! TCTTAAAAAGGCTAAATTAG+GGG - chr2_3:56172873-56172892 None:intergenic 25.0%
! AAATCTGCAGAATCTTAAAA+AGG - chr2_3:56172885-56172904 None:intergenic 25.0%
! CTCACTCAAATTGAATTATT+GGG - chr2_3:56173592-56173611 None:intergenic 25.0%
! AAGAAATAAGAAATTGAGTG+AGG + chr2_3:56173950-56173969 Msa0300680:intron 25.0%
! AGAAATAAGAAATTGAGTGA+GGG + chr2_3:56173951-56173970 Msa0300680:intron 25.0%
!! GAGATACTTCTTTTTAATGT+AGG + chr2_3:56174032-56174051 Msa0300680:intron 25.0%
!! CTTTTCTACACATTTGAATT+AGG - chr2_3:56174179-56174198 None:intergenic 25.0%
!! GCGTGTTTTATAAAATGTTA+GGG + chr2_3:56174243-56174262 Msa0300680:intron 25.0%
!! TGTTTTATAAAATGTTAGGG+AGG + chr2_3:56174246-56174265 Msa0300680:intron 25.0%
! CAGAAAATAACATTAAAGAG+TGG - chr2_3:56174549-56174568 None:intergenic 25.0%
! TAAACTCATTATATAACCGT+TGG + chr2_3:56174607-56174626 Msa0300680:three_prime_UTR 25.0%
!!! TTCTCTTTTGAGATTCATAG+CGG - chr2_3:56169629-56169648 None:intergenic 30.0%
AATCTCAAAAGAGAAGAGAT+TGG + chr2_3:56169634-56169653 Msa0300680:CDS 30.0%
AAAACCAAAGTTCACTTACA+AGG + chr2_3:56169762-56169781 Msa0300680:CDS 30.0%
! CTCTTCTTTTTCTTCTTGTA+AGG - chr2_3:56169996-56170015 None:intergenic 30.0%
! GAAAAAGAAGAGCACAAATA+AGG + chr2_3:56170004-56170023 Msa0300680:CDS 30.0%
TGAATTTCCATTCCAAGTAA+TGG + chr2_3:56170062-56170081 Msa0300680:CDS 30.0%
TCAATTACCATTACTTGGAA+TGG - chr2_3:56170072-56170091 None:intergenic 30.0%
ACAATATACCACTTAGTACA+AGG + chr2_3:56170471-56170490 Msa0300680:intron 30.0%
! ATATCTCCTGATGTATTGAT+TGG - chr2_3:56170598-56170617 None:intergenic 30.0%
ACTATGTGAAGCTTCAAAAT+GGG - chr2_3:56170641-56170660 None:intergenic 30.0%
! TTTGAGCTTTTGAACTCATT+TGG + chr2_3:56170903-56170922 Msa0300680:intron 30.0%
! TTGAGCTTTTGAACTCATTT+GGG + chr2_3:56170904-56170923 Msa0300680:intron 30.0%
AAATTGAACTCAAGACATTG+AGG - chr2_3:56170972-56170991 None:intergenic 30.0%
TTTGCAAGTAAAGCCATAAA+GGG - chr2_3:56171227-56171246 None:intergenic 30.0%
! TTTTGCAAGTAAAGCCATAA+AGG - chr2_3:56171228-56171247 None:intergenic 30.0%
!! CTTGCAAAAGTATTGGTAAT+TGG + chr2_3:56171239-56171258 Msa0300680:intron 30.0%
!!! GATATTTTTTCAGTTTGGTC+CGG - chr2_3:56171449-56171468 None:intergenic 30.0%
AAAAAATATCCGACCTTGTT+TGG + chr2_3:56171459-56171478 Msa0300680:intron 30.0%
TATAACCATAAGTTTGTGTG+AGG - chr2_3:56171621-56171640 None:intergenic 30.0%
! AATTGACCACTGAATTTTAG+GGG - chr2_3:56172237-56172256 None:intergenic 30.0%
TGAAGTCAGGAATTAAACTT+AGG + chr2_3:56172536-56172555 Msa0300680:intron 30.0%
GAAGTCAGGAATTAAACTTA+GGG + chr2_3:56172537-56172556 Msa0300680:intron 30.0%
ATTGTATGGTGTATATTGCA+AGG - chr2_3:56172766-56172785 None:intergenic 30.0%
!! AATCTCTTTGGAGTAAATGT+TGG + chr2_3:56173081-56173100 Msa0300680:intron 30.0%
AAAATAGAAGATCCATGCAA+AGG + chr2_3:56173268-56173287 Msa0300680:intron 30.0%
AAATAGAAGATCCATGCAAA+GGG + chr2_3:56173269-56173288 Msa0300680:intron 30.0%
TCAAAGTATACATGTCATCA+TGG - chr2_3:56173323-56173342 None:intergenic 30.0%
ATTAAGTTCTTCTGTCAGTT+AGG + chr2_3:56173502-56173521 Msa0300680:intron 30.0%
TTAAGTTCTTCTGTCAGTTA+GGG + chr2_3:56173503-56173522 Msa0300680:intron 30.0%
! ATTTGGTCTAGAATCTTTAG+AGG + chr2_3:56173543-56173562 Msa0300680:intron 30.0%
CCTCACTCAAATTGAATTAT+TGG - chr2_3:56173593-56173612 None:intergenic 30.0%
CCAATAATTCAATTTGAGTG+AGG + chr2_3:56173590-56173609 Msa0300680:intron 30.0%
ATATGTTCACCAAACACAAT+GGG - chr2_3:56173628-56173647 None:intergenic 30.0%
AATATGTTCACCAAACACAA+TGG - chr2_3:56173629-56173648 None:intergenic 30.0%
!! AGATATTGGTAGCATGTTTT+AGG + chr2_3:56173840-56173859 Msa0300680:intron 30.0%
! ATCCATTTGAGTTCTTAAAG+TGG + chr2_3:56173991-56174010 Msa0300680:intron 30.0%
! AACCACTTTAAGAACTCAAA+TGG - chr2_3:56173996-56174015 None:intergenic 30.0%
AAGAAATGAAACAAGAGAGA+TGG - chr2_3:56174088-56174107 None:intergenic 30.0%
! TATAAAACACGCGATTTGTT+TGG - chr2_3:56174235-56174254 None:intergenic 30.0%
! CGCGTGTTTTATAAAATGTT+AGG + chr2_3:56174242-56174261 Msa0300680:intron 30.0%
GGCAATATTAGTTGTTTGTT+AGG - chr2_3:56174400-56174419 None:intergenic 30.0%
TACACTAATTATCCTGCAAA+AGG - chr2_3:56174435-56174454 None:intergenic 30.0%
!! TTTGGCTTTCTATATTGGAT+GGG + chr2_3:56174508-56174527 Msa0300680:three_prime_UTR 30.0%
! TTACCTTGCATGCATATTTT+TGG + chr2_3:56174679-56174698 Msa0300680:three_prime_UTR 30.0%
! TACCTTGCATGCATATTTTT+GGG + chr2_3:56174680-56174699 Msa0300680:three_prime_UTR 30.0%
TGGGTAAAAAAACACTTACA+TGG - chr2_3:56174713-56174732 None:intergenic 30.0%
CTAAATGTGCTCACAATATT+TGG - chr2_3:56174770-56174789 None:intergenic 30.0%
! AGAAGAGATTGGAACACTTT+TGG + chr2_3:56169645-56169664 Msa0300680:CDS 35.0%
AAGAAATTCCAACACATGGT+TGG - chr2_3:56169721-56169740 None:intergenic 35.0%
ACCATGTGTTGGAATTTCTT+AGG + chr2_3:56169721-56169740 Msa0300680:intron 35.0%
ACCTAAGAAATTCCAACACA+TGG - chr2_3:56169725-56169744 None:intergenic 35.0%
ACAACCTTGTAAGTGAACTT+TGG - chr2_3:56169769-56169788 None:intergenic 35.0%
TATTCGCGTTTATCTTAGAG+AGG + chr2_3:56169938-56169957 Msa0300680:CDS 35.0%
CGTTTATCTTAGAGAGGTTA+GGG + chr2_3:56169944-56169963 Msa0300680:intron 35.0%
! GGAAATTCAAGAAAAGTGCA+TGG - chr2_3:56170051-56170070 None:intergenic 35.0%
CTAATATGATCTTGGTCCAA+CGG + chr2_3:56170238-56170257 Msa0300680:intron 35.0%
!! GGTTGATGATCATCATATGA+AGG - chr2_3:56170577-56170596 None:intergenic 35.0%
CATCAACCAATCAATACATC+AGG + chr2_3:56170589-56170608 Msa0300680:intron 35.0%
GACTATGTGAAGCTTCAAAA+TGG - chr2_3:56170642-56170661 None:intergenic 35.0%
!!! TAGACCCACTTTTTATAGCT+AGG + chr2_3:56170809-56170828 Msa0300680:intron 35.0%
CCTACCTAGCTATAAAAAGT+GGG - chr2_3:56170816-56170835 None:intergenic 35.0%
ACCTACCTAGCTATAAAAAG+TGG - chr2_3:56170817-56170836 None:intergenic 35.0%
! GTCTTGAGTTCAATTTTTCC+CGG + chr2_3:56170976-56170995 Msa0300680:intron 35.0%
! GGCTTTACTTGCAAAAGTAT+TGG + chr2_3:56171232-56171251 Msa0300680:intron 35.0%
TGGAGTTCATTCATACTCAA+TGG - chr2_3:56171272-56171291 None:intergenic 35.0%
CTTACTCGTACAAATCATGT+TGG - chr2_3:56171292-56171311 None:intergenic 35.0%
! CAACATGATTTGTACGAGTA+AGG + chr2_3:56171290-56171309 Msa0300680:intron 35.0%
!!! GGTCGGATATTTTTTCAGTT+TGG - chr2_3:56171454-56171473 None:intergenic 35.0%
TAGATCGGTTACAATTGGTT+CGG - chr2_3:56171502-56171521 None:intergenic 35.0%
CAAACTAGATCGGTTACAAT+TGG - chr2_3:56171507-56171526 None:intergenic 35.0%
CAATTGTAACCGATCTAGTT+TGG + chr2_3:56171505-56171524 Msa0300680:intron 35.0%
TGAACCAAACCAAACTAGAT+CGG - chr2_3:56171517-56171536 None:intergenic 35.0%
!! ATCTAGTTTGGTTTGGTTCA+TGG + chr2_3:56171517-56171536 Msa0300680:intron 35.0%
!! TTATCATCGGATTGGTTCAT+CGG - chr2_3:56171567-56171586 None:intergenic 35.0%
! ATAAGGAGTGTGGTTATCAT+CGG - chr2_3:56171580-56171599 None:intergenic 35.0%
ACATTCACTTTCTCTCATCT+TGG + chr2_3:56171677-56171696 Msa0300680:intron 35.0%
CTCTCATCTTGGATTTAGTT+TGG + chr2_3:56171688-56171707 Msa0300680:intron 35.0%
! GTTGATGAATGATGCATGTA+TGG + chr2_3:56171847-56171866 Msa0300680:intron 35.0%
AATGATGCATGTATGGATCA+TGG + chr2_3:56171854-56171873 Msa0300680:intron 35.0%
AGAAACCGAACCAAACTAAT+CGG - chr2_3:56172113-56172132 None:intergenic 35.0%
!! ACTGAATTTTAGGGGTGTAA+CGG - chr2_3:56172229-56172248 None:intergenic 35.0%
! AATTCAGTGGTCAATTTTCG+TGG + chr2_3:56172241-56172260 Msa0300680:intron 35.0%
ATTAGTCGTGCATATACACA+AGG + chr2_3:56172512-56172531 Msa0300680:intron 35.0%
ATATACACAAGGATGAAGTC+AGG + chr2_3:56172523-56172542 Msa0300680:intron 35.0%
TATGGTGTATATTGCAAGGA+TGG - chr2_3:56172762-56172781 None:intergenic 35.0%
TTAGCAGATTCATGATTGCA+TGG + chr2_3:56173058-56173077 Msa0300680:intron 35.0%
ATGATTGCATGGAATCTCTT+TGG + chr2_3:56173069-56173088 Msa0300680:intron 35.0%
AATATTTCATCGGCAGCATA+AGG - chr2_3:56173122-56173141 None:intergenic 35.0%
GGTGGGAATTTAGTTGTTTA+AGG - chr2_3:56173159-56173178 None:intergenic 35.0%
! TATATAGTGGGGCATAATAG+AGG - chr2_3:56173189-56173208 None:intergenic 35.0%
AATAATTTACCCTGCATGCA+TGG - chr2_3:56173473-56173492 None:intergenic 35.0%
TGTATGCGCAAAAAGTTTGA+TGG - chr2_3:56173797-56173816 None:intergenic 35.0%
GCAAAAAAAAACTAACCAGC+TGG - chr2_3:56174066-56174085 None:intergenic 35.0%
!!! TGTTTTTAGAAACGTGTGTG+GGG - chr2_3:56174138-56174157 None:intergenic 35.0%
!!! GTGTTTTTAGAAACGTGTGT+GGG - chr2_3:56174139-56174158 None:intergenic 35.0%
!! GGGATTAGCTCAATTTATGT+TGG + chr2_3:56174338-56174357 Msa0300680:intron 35.0%
TCAATTTATGTTGGAGAGTG+AGG + chr2_3:56174347-56174366 Msa0300680:intron 35.0%
TGCAAAAGGAGATATGATCA+TGG - chr2_3:56174421-56174440 None:intergenic 35.0%
! ATGATCATATCTCCTTTTGC+AGG + chr2_3:56174420-56174439 Msa0300680:intron 35.0%
TGGAGTTCTTTCTTTACAAG+AGG + chr2_3:56174471-56174490 Msa0300680:three_prime_UTR 35.0%
!! GTTTGGCTTTCTATATTGGA+TGG + chr2_3:56174507-56174526 Msa0300680:three_prime_UTR 35.0%
ATATTGGATGGGTAAAGTGT+TGG + chr2_3:56174519-56174538 Msa0300680:three_prime_UTR 35.0%
ATCCCAAAAATATGCATGCA+AGG - chr2_3:56174685-56174704 None:intergenic 35.0%
!!! TGCATGCATATTTTTGGGAT+TGG + chr2_3:56174685-56174704 Msa0300680:three_prime_UTR 35.0%
AGTGGAAAGGATTTAGCTGA+AGG + chr2_3:56169570-56169589 Msa0300680:CDS 40.0%
ATTGCAGTGAGAAAGTGGAA+CGG - chr2_3:56169697-56169716 None:intergenic 40.0%
TTGGAATTGCAGTGAGAAAG+TGG - chr2_3:56169702-56169721 None:intergenic 40.0%
TGTCTAAGTGGACATGTACA+AGG - chr2_3:56169822-56169841 None:intergenic 40.0%
ATGTCCACTTAGACAAGCTT+GGG + chr2_3:56169827-56169846 Msa0300680:CDS 40.0%
GAAGCCTTGATGCTCTTATT+GGG + chr2_3:56169850-56169869 Msa0300680:CDS 40.0%
ATGCTCTTATTGGGAGGTTA+AGG + chr2_3:56169859-56169878 Msa0300680:CDS 40.0%
TGCTCTTATTGGGAGGTTAA+GGG + chr2_3:56169860-56169879 Msa0300680:CDS 40.0%
GCGTTTATCTTAGAGAGGTT+AGG + chr2_3:56169943-56169962 Msa0300680:intron 40.0%
! AAATGAGGTGTTAGCTAGCT+AGG + chr2_3:56170159-56170178 Msa0300680:intron 40.0%
! TCATTTGGAGTGTGCATGTA+GGG - chr2_3:56170451-56170470 None:intergenic 40.0%
! TTCATTTGGAGTGTGCATGT+AGG - chr2_3:56170452-56170471 None:intergenic 40.0%
GGTCTAAAAGTAGACTCTTG+AGG - chr2_3:56170795-56170814 None:intergenic 40.0%
!!! CCCACTTTTTATAGCTAGGT+AGG + chr2_3:56170813-56170832 Msa0300680:intron 40.0%
! TTTTATAGCTAGGTAGGTCC+AGG + chr2_3:56170819-56170838 Msa0300680:intron 40.0%
TTTATAGCTAGGTAGGTCCA+GGG + chr2_3:56170820-56170839 Msa0300680:intron 40.0%
! GCTTTTGAACTCATTTGGGT+TGG + chr2_3:56170908-56170927 Msa0300680:intron 40.0%
! TTGAGTTCAATTTTTCCCGG+TGG + chr2_3:56170979-56170998 Msa0300680:intron 40.0%
! AATTTTTCCCGGTGGCAATT+TGG + chr2_3:56170987-56171006 Msa0300680:intron 40.0%
! ATTTTTCCCGGTGGCAATTT+GGG + chr2_3:56170988-56171007 Msa0300680:intron 40.0%
TTGAGGAAGAACACACTCTA+AGG - chr2_3:56171059-56171078 None:intergenic 40.0%
TTAGAGTGTGTTCTTCCTCA+AGG + chr2_3:56171058-56171077 Msa0300680:intron 40.0%
TAATTGAACCTAGGACCTTG+AGG - chr2_3:56171076-56171095 None:intergenic 40.0%
TATCCCTCTAAATTGTCACC+GGG - chr2_3:56171101-56171120 None:intergenic 40.0%
CTATCCCTCTAAATTGTCAC+CGG - chr2_3:56171102-56171121 None:intergenic 40.0%
TTCAGCAGACCAAATTCAGT+AGG + chr2_3:56171379-56171398 Msa0300680:intron 40.0%
TCAGCAGACCAAATTCAGTA+GGG + chr2_3:56171380-56171399 Msa0300680:intron 40.0%
! AAATTCAGTAGGGGTGTAAG+CGG + chr2_3:56171390-56171409 Msa0300680:intron 40.0%
!! GTTTGGACTATCGATTTCGT+TGG - chr2_3:56171427-56171446 None:intergenic 40.0%
ACGAAATCGATAGTCCAAAC+CGG + chr2_3:56171427-56171446 Msa0300680:intron 40.0%
!! TTTTTCAGTTTGGTCCGGTT+TGG - chr2_3:56171444-56171463 None:intergenic 40.0%
! ATATCCGACCTTGTTTGGTT+CGG + chr2_3:56171464-56171483 Msa0300680:intron 40.0%
GTTTCAAACCGAACCAAACA+AGG - chr2_3:56171475-56171494 None:intergenic 40.0%
! GTAACCGATCTAGTTTGGTT+TGG + chr2_3:56171510-56171529 Msa0300680:intron 40.0%
TCCTACCTCACACAAACTTA+TGG + chr2_3:56171613-56171632 Msa0300680:intron 40.0%
ACCATAAGTTTGTGTGAGGT+AGG - chr2_3:56171617-56171636 None:intergenic 40.0%
!! CCAAACTAATCGGTTTGGTT+CGG - chr2_3:56172103-56172122 None:intergenic 40.0%
!! CCAAACCGATTAGTTTGGTT+CGG + chr2_3:56172105-56172124 Msa0300680:intron 40.0%
!! ATTTTAGGGGTGTAACGGTT+CGG - chr2_3:56172224-56172243 None:intergenic 40.0%
GTTACACCCCTAAAATTCAG+TGG + chr2_3:56172228-56172247 Msa0300680:intron 40.0%
GTCAGGAATTAAACTTAGGG+AGG + chr2_3:56172540-56172559 Msa0300680:intron 40.0%
TCTCACGAACAATCATGCAT+GGG - chr2_3:56172913-56172932 None:intergenic 40.0%
ATCTCACGAACAATCATGCA+TGG - chr2_3:56172914-56172933 None:intergenic 40.0%
ATAATAGAGGTGAGGATGGT+GGG - chr2_3:56173176-56173195 None:intergenic 40.0%
TTTGATTGAGATCGTGTGTC+TGG + chr2_3:56173338-56173357 Msa0300680:intron 40.0%
! AATCTTTAGAGGCAGGATCT+GGG + chr2_3:56173554-56173573 Msa0300680:intron 40.0%
AACTCTACACCCATTGTGTT+TGG + chr2_3:56173616-56173635 Msa0300680:intron 40.0%
! ATGTAGGATTTTCTTCCAGC+TGG + chr2_3:56174048-56174067 Msa0300680:intron 40.0%
!!! CGTGTTTTTAGAAACGTGTG+TGG - chr2_3:56174140-56174159 None:intergenic 40.0%
!! CTTTACAAGAGGCACTCTAA+TGG + chr2_3:56174482-56174501 Msa0300680:three_prime_UTR 40.0%
!! GGAGGTTTGGCTTTCTATAT+TGG + chr2_3:56174503-56174522 Msa0300680:three_prime_UTR 40.0%
! TATAACCGTTGGTTATGCCT+TGG + chr2_3:56174618-56174637 Msa0300680:three_prime_UTR 40.0%
ATAGACCAAGGCATAACCAA+CGG - chr2_3:56174626-56174645 None:intergenic 40.0%
TTCGAATGCAACATAGACCA+AGG - chr2_3:56174638-56174657 None:intergenic 40.0%
GGAAAGGATTTAGCTGAAGG+AGG + chr2_3:56169573-56169592 Msa0300680:CDS 45.0%
TTGCAGTGAGAAAGTGGAAC+GGG - chr2_3:56169696-56169715 None:intergenic 45.0%
CTGCAATTCCAACCATGTGT+TGG + chr2_3:56169710-56169729 Msa0300680:intron 45.0%
CATGTCCACTTAGACAAGCT+TGG + chr2_3:56169826-56169845 Msa0300680:CDS 45.0%
TGTCCACTTAGACAAGCTTG+GGG + chr2_3:56169828-56169847 Msa0300680:CDS 45.0%
GGAAGCCTTGATGCTCTTAT+TGG + chr2_3:56169849-56169868 Msa0300680:CDS 45.0%
!! ACCTCCCAATAAGAGCATCA+AGG - chr2_3:56169857-56169876 None:intergenic 45.0%
AGGGCTGCATATGAGGAAAA+CGG + chr2_3:56169879-56169898 Msa0300680:CDS 45.0%
ATATGATCTTGGTCCAACGG+TGG + chr2_3:56170241-56170260 Msa0300680:intron 45.0%
CAGTTTATGAGATCCACCGT+TGG - chr2_3:56170257-56170276 None:intergenic 45.0%
GAGGTCTTCCTTGTACTAAG+TGG - chr2_3:56170482-56170501 None:intergenic 45.0%
TTATAGCTAGGTAGGTCCAG+GGG + chr2_3:56170821-56170840 Msa0300680:intron 45.0%
!! ACTCATTTGGGTTGGTCTGA+TGG + chr2_3:56170916-56170935 Msa0300680:intron 45.0%
TTGAGGAAGAACACGCTTCA+AGG - chr2_3:56170955-56170974 None:intergenic 45.0%
! TTTTTCCCGGTGGCAATTTG+GGG + chr2_3:56170989-56171008 Msa0300680:intron 45.0%
GTCCTAGGTTCAATTATCCC+CGG + chr2_3:56171080-56171099 Msa0300680:intron 45.0%
TATCCCCGGTGACAATTTAG+AGG + chr2_3:56171094-56171113 Msa0300680:intron 45.0%
ATCCCCGGTGACAATTTAGA+GGG + chr2_3:56171095-56171114 Msa0300680:intron 45.0%
ATCCCTCTAAATTGTCACCG+GGG - chr2_3:56171100-56171119 None:intergenic 45.0%
!! GGTTCTAGGTAGGACTTGTT+TGG - chr2_3:56171203-56171222 None:intergenic 45.0%
!! CATAAAGGGTGGTTCTAGGT+AGG - chr2_3:56171213-56171232 None:intergenic 45.0%
CTACCTAGAACCACCCTTTA+TGG + chr2_3:56171211-56171230 Msa0300680:intron 45.0%
AAGCCATAAAGGGTGGTTCT+AGG - chr2_3:56171217-56171236 None:intergenic 45.0%
GCAAGTAAAGCCATAAAGGG+TGG - chr2_3:56171224-56171243 None:intergenic 45.0%
CAGCAGACCAAATTCAGTAG+GGG + chr2_3:56171381-56171400 Msa0300680:intron 45.0%
GCTTACACCCCTACTGAATT+TGG - chr2_3:56171391-56171410 None:intergenic 45.0%
CAAACCGAACCAAACAAGGT+CGG - chr2_3:56171471-56171490 None:intergenic 45.0%
!! CGGTTACAATTGGTTCGGAT+CGG - chr2_3:56171497-56171516 None:intergenic 45.0%
!! GGATTGGTTCATCGGTTTCA+CGG - chr2_3:56171559-56171578 None:intergenic 45.0%
GAGTGTGGTTATCATCGGAT+TGG - chr2_3:56171575-56171594 None:intergenic 45.0%
!! ATCGGTTTGGTTCGGTTGAT+CGG - chr2_3:56172095-56172114 None:intergenic 45.0%
! CCGAACCAAACCGATTAGTT+TGG + chr2_3:56172100-56172119 Msa0300680:intron 45.0%
CCGAACCAAACTAATCGGTT+TGG - chr2_3:56172108-56172127 None:intergenic 45.0%
!! TTCATCGGTTCGGTTTGGTT+CGG - chr2_3:56172156-56172175 None:intergenic 45.0%
!! AAACCTTCATCGGTTCGGTT+TGG - chr2_3:56172161-56172180 None:intergenic 45.0%
! CGATGAAACCTTCATCGGTT+CGG - chr2_3:56172166-56172185 None:intergenic 45.0%
CGAACCGATGAAGGTTTCAT+CGG + chr2_3:56172164-56172183 Msa0300680:intron 45.0%
CGAACCGATGAAACCTTCAT+CGG - chr2_3:56172171-56172190 None:intergenic 45.0%
! CGATGAAGGTTTCATCGGTT+CGG + chr2_3:56172169-56172188 Msa0300680:intron 45.0%
!! TGTAACGGTTCGGTTTGGAT+TGG - chr2_3:56172214-56172233 None:intergenic 45.0%
ATTGCAAGGATGGAGCTAGA+AGG - chr2_3:56172752-56172771 None:intergenic 45.0%
CATAATAGAGGTGAGGATGG+TGG - chr2_3:56173177-56173196 None:intergenic 45.0%
CATCTCAATCACCCTTTGCA+TGG - chr2_3:56173283-56173302 None:intergenic 45.0%
GTGTCTGGCATCAGATTATG+TGG + chr2_3:56173353-56173372 Msa0300680:intron 45.0%
AGAAACAAGCCATGCATGCA+GGG + chr2_3:56173461-56173480 Msa0300680:intron 45.0%
! GGTCTAGAATCTTTAGAGGC+AGG + chr2_3:56173547-56173566 Msa0300680:intron 45.0%
! GAATCTTTAGAGGCAGGATC+TGG + chr2_3:56173553-56173572 Msa0300680:intron 45.0%
CTAAAAACACGCGATCTCTC+TGG + chr2_3:56174149-56174168 Msa0300680:intron 45.0%
GTTGGAGAGTGAGGAGTTAA+TGG + chr2_3:56174356-56174375 Msa0300680:intron 45.0%
GAGTGAGGAGTTAATGGAGT+AGG + chr2_3:56174362-56174381 Msa0300680:intron 45.0%
!! TACAAGAGGCACTCTAATGG+AGG + chr2_3:56174485-56174504 Msa0300680:three_prime_UTR 45.0%
!!! ATTTTTTTTTATTTTAACAA+AGG - chr2_3:56170544-56170563 None:intergenic 5.0%
!!! TTAAACATTTTAATTTAATT+TGG - chr2_3:56172469-56172488 None:intergenic 5.0%
!! AAAATATTAAAAAAATTTAG+GGG + chr2_3:56172705-56172724 Msa0300680:intron 5.0%
!! TAAAATATTTAATATTTCAT+CGG - chr2_3:56173132-56173151 None:intergenic 5.0%
!! TATATATATATATATATAGT+GGG - chr2_3:56173201-56173220 None:intergenic 5.0%
!! ATATATATATATATATATAG+TGG - chr2_3:56173202-56173221 None:intergenic 5.0%
GCTAAGTGTGATTCCTTGCG+AGG - chr2_3:56169607-56169626 None:intergenic 50.0%
AAAGTGGAACGGGTGGTCTA+AGG - chr2_3:56169686-56169705 None:intergenic 50.0%
AGTGGACATGTACAAGGTGC+TGG - chr2_3:56169816-56169835 None:intergenic 50.0%
CTTCCCCAAGCTTGTCTAAG+TGG - chr2_3:56169834-56169853 None:intergenic 50.0%
GCCTTGATGCTCTTATTGGG+AGG + chr2_3:56169853-56169872 Msa0300680:CDS 50.0%
GAGGTTAAGGGCTGCATATG+AGG + chr2_3:56169872-56169891 Msa0300680:CDS 50.0%
GCTGCATATGAGGAAAACGG+TGG + chr2_3:56169882-56169901 Msa0300680:CDS 50.0%
TGAGGAAAACGGTGGAACTC+CGG + chr2_3:56169890-56169909 Msa0300680:CDS 50.0%
!! CTCGCGAAAGGATTAGTCTC+CGG - chr2_3:56169912-56169931 None:intergenic 50.0%
GAGACTAATCCTTTCGCGAG+CGG + chr2_3:56169912-56169931 Msa0300680:CDS 50.0%
!! GGTTAGGGAGTGTCAAGCTA+AGG + chr2_3:56169959-56169978 Msa0300680:intron 50.0%
! GGAGTGTCAAGCTAAGGCTA+GGG + chr2_3:56169965-56169984 Msa0300680:intron 50.0%
GAGTGTCAAGCTAAGGCTAG+GGG + chr2_3:56169966-56169985 Msa0300680:intron 50.0%
!! TTGGGTTGGTCTGATGGTGT+TGG + chr2_3:56170922-56170941 Msa0300680:intron 50.0%
! TTTTCCCGGTGGCAATTTGG+GGG + chr2_3:56170990-56171009 Msa0300680:intron 50.0%
GTGTTCTTCCTCAAGGTCCT+AGG + chr2_3:56171065-56171084 Msa0300680:intron 50.0%
CACCGGGGATAATTGAACCT+AGG - chr2_3:56171085-56171104 None:intergenic 50.0%
GAACCAAACCGAACCGATGA+AGG + chr2_3:56172155-56172174 Msa0300680:intron 50.0%
GGGCATAATAGAGGTGAGGA+TGG - chr2_3:56173180-56173199 None:intergenic 50.0%
AGTGGGGCATAATAGAGGTG+AGG - chr2_3:56173184-56173203 None:intergenic 50.0%
CAGAAACAAGCCATGCATGC+AGG + chr2_3:56173460-56173479 Msa0300680:intron 50.0%
! GAGGCACTCTAATGGAGGTT+TGG + chr2_3:56174490-56174509 Msa0300680:three_prime_UTR 50.0%
GGAGGATCATCAACCTCGCA+AGG + chr2_3:56169591-56169610 Msa0300680:CDS 55.0%
CAGTGAGAAAGTGGAACGGG+TGG - chr2_3:56169693-56169712 None:intergenic 55.0%
!! GGACATGTACAAGGTGCTGG+TGG - chr2_3:56169813-56169832 None:intergenic 55.0%
!! GGGAGTGTCAAGCTAAGGCT+AGG + chr2_3:56169964-56169983 Msa0300680:intron 55.0%
TTTCCCGGTGGCAATTTGGG+GGG + chr2_3:56170991-56171010 Msa0300680:intron 55.0%
TATCCCCCCAAATTGCCACC+GGG - chr2_3:56170997-56171016 None:intergenic 55.0%
CTATCCCCCCAAATTGCCAC+CGG - chr2_3:56170998-56171017 None:intergenic 55.0%
! CAGTAGGGGTGTAAGCGGTT+CGG + chr2_3:56171395-56171414 Msa0300680:intron 55.0%
!! AGGGGTGTAACGGTTCGGTT+TGG - chr2_3:56172219-56172238 None:intergenic 55.0%
AAGGAGACCAGCAGAGGTCA+CGG - chr2_3:56172733-56172752 None:intergenic 55.0%
AGCTAGAAGGAGACCAGCAG+AGG - chr2_3:56172739-56172758 None:intergenic 55.0%
!! GTACAAGGTGCTGGTGGCTC+TGG - chr2_3:56169807-56169826 None:intergenic 60.0%
CGAATAGCACCGCTCGCGAA+AGG - chr2_3:56169924-56169943 None:intergenic 60.0%
AGGGGGACCGTGACCTCTGC+TGG + chr2_3:56172723-56172742 Msa0300680:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 56169561 56174796 56169561 ID=Msa0300680;Name=Msa0300680
chr2_3 mRNA 56169561 56174796 56169561 ID=Msa0300680-mRNA-1;Parent=Msa0300680;Name=Msa0300680-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.33|0.25|1|0|0|4|346|166
chr2_3 exon 56169561 56169727 56169561 ID=Msa0300680-mRNA-1:exon:17955;Parent=Msa0300680-mRNA-1
chr2_3 exon 56169743 56169959 56169743 ID=Msa0300680-mRNA-1:exon:17956;Parent=Msa0300680-mRNA-1
chr2_3 exon 56169976 56170083 56169976 ID=Msa0300680-mRNA-1:exon:17957;Parent=Msa0300680-mRNA-1
chr2_3 exon 56174442 56174796 56174442 ID=Msa0300680-mRNA-1:exon:17958;Parent=Msa0300680-mRNA-1
chr2_3 CDS 56169561 56169727 56169561 ID=Msa0300680-mRNA-1:cds;Parent=Msa0300680-mRNA-1
chr2_3 CDS 56169743 56169959 56169743 ID=Msa0300680-mRNA-1:cds;Parent=Msa0300680-mRNA-1
chr2_3 CDS 56169976 56170083 56169976 ID=Msa0300680-mRNA-1:cds;Parent=Msa0300680-mRNA-1
chr2_3 CDS 56174442 56174450 56174442 ID=Msa0300680-mRNA-1:cds;Parent=Msa0300680-mRNA-1
chr2_3 three_prime_UTR 56174451 56174796 56174451 ID=Msa0300680-mRNA-1:three_prime_utr;Parent=Msa0300680-mRNA-1
Gene Sequence

>Msa0300680

ATGTCTTCAAGTGGAAAGGATTTAGCTGAAGGAGGATCATCAACCTCGCAAGGAATCACACTTAGCCGCTATGAATCTCAAAAGAGAAGAGATTGGAACACTTTTGGTCAATACTTAAACAACCTTAGACCACCCGTTCCACTTTCTCACTGCAATTCCAACCATGTGTATTTAGATCAATTTGGAAAAACCAAAGTTCACTTACAAGGTTGTATGTTTTATGGACAGCCAGAGCCACCAGCACCTTGTACATGTCCACTTAGACAAGCTTGGGGAAGCCTTGATGCTCTTATTGGGAGGTTAAGGGCTGCATATGAGGAAAACGGTGGAACTCCGGAGACTAATCCTTTCGCGAGCGGTGCTATTCGCGTTTATCTTAGAGAGCTAAGGCTAGGGGTATCCCTTACAAGAAGAAAAAGAAGAGCACAAATAAGGGAAATGATGAATCAAGCTCAACCATGCACTTTTCTTGAATTTCCATTCCAAGTAATGGATAATTAG
Protein sequence

>Msa0300680

MSSSGKDLAEGGSSTSQGITLSRYESQKRRDWNTFGQYLNNLRPPVPLSHCNSNHVYLDQFGKTKVHLQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGTPETNPFASGAIRVYLRELRLGVSLTRRKRRAQIREMMNQAQPCTFLEFPFQVMDN*