AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0244640


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0244640 MtrunA17_Chr2g0298801 96.928 1009 28 3 1 1006 1 1009 0.0 2018
Msa0244640 MtrunA17_Chr4g0071701 52.276 637 214 20 397 1006 247 820 0.0 548
Msa0244640 MtrunA17_Chr4g0071701 62.097 248 54 8 1 212 1 244 3.22e-67 241
Msa0244640 MtrunA17_Chr4g0073021 30.712 1081 549 42 1 964 1 998 5.52e-113 374
Msa0244640 MtrunA17_Chr1g0197121 40.417 527 253 17 1 500 1 493 3.20e-103 342
Msa0244640 MtrunA17_Chr1g0177421 40.607 527 239 17 1 500 1 480 2.17e-100 333
Msa0244640 MtrunA17_Chr5g0430201 26.738 1021 530 43 1 863 1 961 9.54e-44 172
Msa0244640 MtrunA17_Chr3g0105051 30.505 554 281 23 1 498 1 506 2.50e-35 145
Msa0244640 MtrunA17_Chr3g0113631 32.854 417 219 14 1 397 1 376 1.27e-33 140
Msa0244640 MtrunA17_Chr4g0061371 30.078 256 144 9 26 280 20 241 1.66e-17 88.2
Msa0244640 MtrunA17_Chr7g0225161 29.388 245 138 8 26 269 20 230 6.24e-16 83.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0244640 AT4G29920.2 42.226 1087 470 39 1 1000 1 1016 0.0 662
Msa0244640 AT4G29920.1 42.042 1087 469 39 1 1000 1 1013 0.0 655
Msa0244640 AT5G57130.1 41.547 1112 456 47 1 1003 1 1027 0.0 629
Msa0244640 AT3G52490.1 40.619 517 236 14 1 496 1 467 2.31e-104 345
Msa0244640 AT5G57710.1 33.414 829 415 30 1 758 1 763 3.60e-101 340
Msa0244640 AT4G30350.1 38.148 540 256 17 1 498 1 504 5.23e-79 278
Msa0244640 AT2G29970.1 27.014 1055 584 45 1 962 1 962 6.52e-55 207
Msa0244640 AT1G07200.2 27.064 872 454 35 1 779 1 783 4.26e-46 180
Msa0244640 AT2G40130.1 31.655 417 232 16 1 397 1 384 1.28e-40 162
Msa0244640 AT2G40130.2 31.655 417 232 16 1 397 1 384 1.40e-40 162
Msa0244640 AT1G74310.1 26.953 256 152 9 26 280 20 241 6.25e-15 80.1
Msa0244640 AT1G74310.2 26.953 256 152 9 26 280 20 241 8.80e-15 79.7

Find 163 sgRNAs with CRISPR-Local

Find 253 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAATTGTTAACTACTTAA+TGG 0.116030 2_2:+23325312 Msa0244640:CDS
ATAATTCATCATACCCTTAT+TGG 0.138198 2_2:+23323868 Msa0244640:CDS
AAAATGGGATAGTGGGTTTA+TGG 0.183846 2_2:+23325267 Msa0244640:CDS
CTTGTCAAATCACTTGAAAT+TGG 0.210696 2_2:-23324914 None:intergenic
CTACCTTGGTTTGGCCAATA+AGG 0.218068 2_2:-23323882 None:intergenic
AGCACATTCCTTTGATGATT+TGG 0.220493 2_2:-23324276 None:intergenic
CAATGAAAAGTTTGTTGTTT+TGG 0.224683 2_2:+23324466 Msa0244640:CDS
AACCATTTCTTGAGTTCTTA+TGG 0.228156 2_2:+23321455 Msa0244640:CDS
GATATTGAACTTGGTGTATC+TGG 0.233918 2_2:-23323915 None:intergenic
TTCTTGAGTTCTTATGGTTA+TGG 0.246625 2_2:+23321461 Msa0244640:CDS
CCATTAAGTAGTTAACAATT+TGG 0.247388 2_2:-23325312 None:intergenic
TAAGGGTATGATGAATTATA+AGG 0.279485 2_2:-23323864 None:intergenic
ATTGCAAAGTTTGGAACTTT+AGG 0.282514 2_2:+23324548 Msa0244640:CDS
ACAAGTTTAGAGAGGGTTAA+TGG 0.285676 2_2:+23325190 Msa0244640:CDS
AGAAGAATCTGTTGCCTTCA+TGG 0.287597 2_2:+23323263 Msa0244640:CDS
CTTGGAGTTGGATTCTCTTA+AGG 0.288171 2_2:+23324070 Msa0244640:CDS
CCTGTTCCATCTGGTGGACT+TGG 0.302111 2_2:+23322067 Msa0244640:CDS
TATAGTTTATACACTTTGTT+GGG 0.306813 2_2:+23325228 Msa0244640:CDS
AAAATCTTCTGAGTCTAATA+AGG 0.315204 2_2:+23321538 Msa0244640:CDS
GATTATGTTGTGGAAGAAAT+AGG 0.322451 2_2:+23321914 Msa0244640:CDS
GTCATTTCCTTGTTCTTAGC+TGG 0.323821 2_2:-23325013 None:intergenic
TCATCAAAATCACCTTGTTT+AGG 0.334064 2_2:+23324707 Msa0244640:CDS
TTGGAGTTGGATTCTCTTAA+GGG 0.334465 2_2:+23324071 Msa0244640:CDS
GGAACAAGAATGGTAAGATT+TGG 0.338899 2_2:+23321957 Msa0244640:CDS
GTTAGTGATTATGTTGCATT+AGG 0.341264 2_2:+23321809 Msa0244640:CDS
ATGTTTGAGAAATGGCTAAA+AGG 0.352149 2_2:+23325157 Msa0244640:CDS
GATAAGGTGATAGAGGAAAT+TGG 0.356476 2_2:+23325106 Msa0244640:CDS
CTAACAACATGTTTGAGAAA+TGG 0.359340 2_2:+23325149 Msa0244640:CDS
AGTAGAGTTATGAGAGAAGC+TGG 0.362568 2_2:+23321341 Msa0244640:CDS
AAATGGGATAGTGGGTTTAT+GGG 0.369377 2_2:+23325268 Msa0244640:CDS
GGCAACAGATTCTTCTGGTC+TGG 0.371234 2_2:-23323256 None:intergenic
TACCTTGGTTTGGCCAATAA+GGG 0.372431 2_2:-23323881 None:intergenic
TTGGTTGAAAATGCTGATTT+TGG 0.372782 2_2:+23324485 Msa0244640:CDS
AGATGTAAAATGCAAGTAAT+AGG 0.372867 2_2:+23325377 Msa0244640:three_prime_UTR
GAATTTGAGATTGCAAAGTT+TGG 0.378824 2_2:+23324539 Msa0244640:CDS
GTTTGAGCTATAAGCTGGTT+TGG 0.382997 2_2:-23323955 None:intergenic
CAAGCTGTTCCTGTTCCATC+TGG 0.386300 2_2:+23322058 Msa0244640:CDS
GCAATTGCAGAATCAGTGTT+TGG 0.389107 2_2:+23324353 Msa0244640:CDS
ACTCCAAGGTTGTTGTTACT+TGG 0.405028 2_2:-23324055 None:intergenic
CGCGACGGAATCGAGGTATA+AGG 0.415499 2_2:-23323977 None:intergenic
TGCAAGGAAATGATTCTGTT+GGG 0.420831 2_2:+23324312 Msa0244640:CDS
GGAAAGTTGTTTGGTGAAGA+AGG 0.427180 2_2:+23321935 Msa0244640:CDS
TCATATATATAAAGTGTTGC+AGG 0.428362 2_2:+23324196 Msa0244640:CDS
GTGGTAAAGAGGATAGAAAA+TGG 0.429390 2_2:+23325251 Msa0244640:CDS
ATTGATCATATCACTGACTT+TGG 0.429568 2_2:+23325335 Msa0244640:exon
CATCAAAGGAATGTGCTACT+TGG 0.430549 2_2:+23324282 Msa0244640:CDS
CACCATTGATTCTCAAAAGT+TGG 0.432170 2_2:-23322031 None:intergenic
TAGTTCAATAGCAGAAGCTT+TGG 0.437063 2_2:+23324247 Msa0244640:CDS
TCTTTAACTGAAGGACTAGT+TGG 0.442649 2_2:+23321635 Msa0244640:CDS
AACCATAAGAACTCAAGAAA+TGG 0.445877 2_2:-23321457 None:intergenic
TGGAGATTTGAAGTGGATAG+TGG 0.446714 2_2:+23321853 Msa0244640:CDS
GAAGGATTCAGTGATGAAGT+TGG 0.452059 2_2:+23324625 Msa0244640:CDS
GAGGATAGAAAATGGGATAG+TGG 0.454439 2_2:+23325259 Msa0244640:CDS
GTATAGTTTATACACTTTGT+TGG 0.454781 2_2:+23325227 Msa0244640:CDS
CAAATTCTCAATTGAGTCTA+GGG 0.457600 2_2:-23324972 None:intergenic
GTTGGATTCTCTTAAGGGTA+TGG 0.458957 2_2:+23324076 Msa0244640:CDS
AACAGAAGGGTCATCAAGAA+TGG 0.461745 2_2:-23321318 None:intergenic
GTGATAGAGGAAATTGGTGT+AGG 0.463249 2_2:+23325112 Msa0244640:CDS
CACTGACTTTGGTTAGTAGT+GGG 0.465490 2_2:+23325346 Msa0244640:three_prime_UTR
TTGCAAGGAAATGATTCTGT+TGG 0.465938 2_2:+23324311 Msa0244640:CDS
TGTACAAGATAAGGTGATAG+AGG 0.466717 2_2:+23325099 Msa0244640:CDS
AAGATACTACTACCTTGGTT+TGG 0.466919 2_2:-23323891 None:intergenic
ATTGACAATACTGCCACCAT+TGG 0.472037 2_2:-23324591 None:intergenic
AAAATTTAGTGTACAAGATA+AGG 0.472610 2_2:+23325090 Msa0244640:CDS
ACAAATTCTCAATTGAGTCT+AGG 0.473106 2_2:-23324973 None:intergenic
GATGGTGATAACTCAAAAGT+TGG 0.473844 2_2:-23324677 None:intergenic
TTTGAGGTTGTTTGTTCTGG+TGG 0.473926 2_2:-23323800 None:intergenic
GTGGTTGCTGCTGTTGCTGT+TGG 0.474742 2_2:-23321256 None:intergenic
TCAAAACCCATCTCCTATGC+TGG 0.480572 2_2:+23323138 Msa0244640:CDS
CTGGCAAGATACTACTACCT+TGG 0.481842 2_2:-23323896 None:intergenic
AAGGGTATGATGAATTATAA+GGG 0.483177 2_2:-23323863 None:intergenic
ATCATTGAAGCTGAACTCAA+TGG 0.484131 2_2:-23324015 None:intergenic
AAAGGTGAAGTAGTAGTAGT+TGG 0.486118 2_2:-23321137 None:intergenic
ATAAGGTTTGAGCTATAAGC+TGG 0.487817 2_2:-23323960 None:intergenic
ATGAAGGCAACAGATTCTTC+TGG 0.489093 2_2:-23323261 None:intergenic
GCTGTTCCTGTTCCATCTGG+TGG 0.490790 2_2:+23322061 Msa0244640:CDS
AACTATGATTGTTGCTCCAA+TGG 0.491661 2_2:-23323824 None:intergenic
CCAAGGATTGAAGAAAATGA+AGG 0.493746 2_2:+23324776 Msa0244640:CDS
GAGCTCAAGCTCATCAAAGA+AGG 0.494543 2_2:+23321216 Msa0244640:CDS
GTTTGAGTCTTCATTCATCA+AGG 0.497632 2_2:+23322089 Msa0244640:CDS
AGGATAGAAAATGGGATAGT+GGG 0.497966 2_2:+23325260 Msa0244640:CDS
GATTTGACAAGAGAAACATT+AGG 0.500539 2_2:+23324926 Msa0244640:CDS
ATGTTATAAGAGTGTTGAAA+AGG 0.504959 2_2:+23321783 Msa0244640:CDS
GAAAGTTGTTTGGTGAAGAA+GGG 0.506532 2_2:+23321936 Msa0244640:CDS
TCAACTTTAACACTCAAAAG+TGG 0.507140 2_2:-23321275 None:intergenic
ATAAGGGTAGATCTTTGCAT+TGG 0.508400 2_2:-23323847 None:intergenic
ATTAGAAGTTACACAAAAGA+AGG 0.509570 2_2:-23325402 None:intergenic
CCAAGTCCACCAGATGGAAC+AGG 0.510866 2_2:-23322067 None:intergenic
TCAATCTTGAAGCACTCTCT+AGG 0.512470 2_2:+23320939 Msa0244640:CDS
GGTTGATTCCAAATCATCAA+AGG 0.514321 2_2:+23324268 Msa0244640:CDS
TGGTAAAGAGGATAGAAAAT+GGG 0.517397 2_2:+23325252 Msa0244640:CDS
AGTAACAACAACCTTGGAGT+TGG 0.517705 2_2:+23324058 Msa0244640:CDS
TCACTGACTTTGGTTAGTAG+TGG 0.518331 2_2:+23325345 Msa0244640:three_prime_UTR
TTGATTCCAGCATAGGAGAT+GGG 0.522179 2_2:-23323144 None:intergenic
ACTTTGTTGGGGTGGTAAAG+AGG 0.524368 2_2:+23325240 Msa0244640:CDS
GAGGAAATTGGTGTAGGGTG+TGG 0.525237 2_2:+23325118 Msa0244640:CDS
AGAAGATGAAGACTATGATG+AGG 0.527194 2_2:+23324880 Msa0244640:CDS
GATACAGTTTCTTTAACTGA+AGG 0.527453 2_2:+23321626 Msa0244640:CDS
CTGACTTTGGTTAGTAGTGG+GGG 0.527571 2_2:+23325348 Msa0244640:three_prime_UTR
TTTGATTCCAGCATAGGAGA+TGG 0.528413 2_2:-23323145 None:intergenic
GTTACATGAGGTGTCAAATG+AGG 0.528631 2_2:+23322005 Msa0244640:CDS
TGGATAGTGGATGATAATGA+TGG 0.530923 2_2:+23321866 Msa0244640:CDS
TATAAGAGTGTTGAAAAGGA+AGG 0.531869 2_2:+23321787 Msa0244640:CDS
GCATTTCTTAAAGAAGAAGA+TGG 0.533196 2_2:-23321029 None:intergenic
GAAGATGAAGACTATGATGA+GGG 0.534488 2_2:+23324881 Msa0244640:CDS
GAAGAAATAGGAAAGTTGTT+TGG 0.534540 2_2:+23321926 Msa0244640:CDS
CTTGGAAATTCAACATTCAG+TGG 0.534821 2_2:+23324131 Msa0244640:CDS
GACAAAGATGTTTATGTCAA+GGG 0.535057 2_2:+23325033 Msa0244640:CDS
GTTTATACACTTTGTTGGGG+TGG 0.536531 2_2:+23325232 Msa0244640:CDS
GTTTAGAGAGGGTTAATGGT+GGG 0.538900 2_2:+23325194 Msa0244640:CDS
TGACAAAGATGTTTATGTCA+AGG 0.539341 2_2:+23325032 Msa0244640:CDS
GATTATGTTGCATTAGGTGT+TGG 0.539481 2_2:+23321815 Msa0244640:CDS
GGTGAAGAAGGGAACAAGAA+TGG 0.542309 2_2:+23321947 Msa0244640:CDS
AGCTCAAGCTCATCAAAGAA+GGG 0.544619 2_2:+23321217 Msa0244640:CDS
CTCATAACTCTACTAACAGA+AGG 0.547154 2_2:-23321332 None:intergenic
ACAAACAACCTCAAAACCAT+TGG 0.547893 2_2:+23323808 Msa0244640:CDS
TAGCAAATTGTAATGCGCTC+AGG 0.548048 2_2:+23320876 None:intergenic
ATAATGAAAAGATTTGAAAG+AGG 0.551174 2_2:+23321662 Msa0244640:CDS
GTAAAGACAACTCTTGCACT+TGG 0.555155 2_2:+23324113 Msa0244640:CDS
TCAACAAAAGATATTGAACT+TGG 0.555816 2_2:-23323924 None:intergenic
GATTCTCTTAAGGGTATGGA+AGG 0.560727 2_2:+23324080 Msa0244640:CDS
AAACCAAGTAACAACAACCT+TGG 0.563498 2_2:+23324052 Msa0244640:CDS
TTAGAGAGGGTTAATGGTGG+GGG 0.564593 2_2:+23325196 Msa0244640:CDS
ACTGACTTTGGTTAGTAGTG+GGG 0.567654 2_2:+23325347 Msa0244640:three_prime_UTR
CTAACTGTTTCACATTGCCA+TGG 0.568665 2_2:-23324227 None:intergenic
TGATAGAGGAAATTGGTGTA+GGG 0.570147 2_2:+23325113 Msa0244640:CDS
CTTCAAGATTGAAGCAGCCT+CGG 0.571682 2_2:-23320928 None:intergenic
CAAGGATTGAAGAAAATGAA+GGG 0.573650 2_2:+23324777 Msa0244640:CDS
AGTGTAGCAGCAACGTGAAG+AGG 0.575327 2_2:-23320996 None:intergenic
TTTAGAGAGGGTTAATGGTG+GGG 0.579670 2_2:+23325195 Msa0244640:CDS
TGTCAATGAAGATCAGAAGA+AGG 0.579932 2_2:+23324607 Msa0244640:CDS
TGTTGTCCGCGACGGAATCG+AGG 0.580825 2_2:-23323984 None:intergenic
AAAATATTCATATTGTCCAA+TGG 0.583934 2_2:+23324575 Msa0244640:CDS
TCTATGTTGGAGATTTGAAG+TGG 0.587362 2_2:+23321846 Msa0244640:CDS
TGAACTTGACTTGTTTAGCA+AGG 0.587561 2_2:+23324745 Msa0244640:CDS
ATGAGTGCATTAGAAAGAGA+AGG 0.588534 2_2:-23321179 None:intergenic
ATAGTTTATACACTTTGTTG+GGG 0.593962 2_2:+23325229 Msa0244640:CDS
GGTAAAAGAGTCATTTGAGG+AGG 0.594837 2_2:+23325054 Msa0244640:CDS
TCAAGAGCTCTACATTGAAG+AGG 0.598089 2_2:-23321083 None:intergenic
CTATGAGACTGAAGCCATGA+AGG 0.600566 2_2:-23323277 None:intergenic
ACATGCTGTGGTTGAAGCAA+AGG 0.603439 2_2:-23321155 None:intergenic
TTACATGAGGTGTCAAATGA+GGG 0.606608 2_2:+23322006 Msa0244640:CDS
AGAGATTGTTGATTATGTTG+TGG 0.609416 2_2:+23321904 Msa0244640:CDS
AGTTTAGAGAGGGTTAATGG+TGG 0.613323 2_2:+23325193 Msa0244640:CDS
CTAGGCTTAGCACGTAGAAG+AGG 0.615440 2_2:+23320957 Msa0244640:CDS
CTCAAACCAAGTCCACCAGA+TGG 0.615673 2_2:-23322073 None:intergenic
GAAAGAGAAGGAACATGCTG+TGG 0.616344 2_2:-23321167 None:intergenic
TAGCACACAAGCACGTCAGA+AGG 0.619056 2_2:+23323297 Msa0244640:CDS
CTTAAGAGAATCCAACTCCA+AGG 0.619758 2_2:-23324069 None:intergenic
AAGGGTAAAAGAGTCATTTG+AGG 0.622133 2_2:+23325051 Msa0244640:CDS
GCTCAAGCTCATCAAAGAAG+GGG 0.624859 2_2:+23321218 Msa0244640:CDS
TCAAAGTCCAGCTAAGAACA+AGG 0.627959 2_2:+23325006 Msa0244640:CDS
AAATGGTTATGACTAAGAGA+AGG 0.639749 2_2:-23321440 None:intergenic
ATATTCATATTGTCCAATGG+TGG 0.641525 2_2:+23324578 Msa0244640:CDS
TCATAACTCTACTAACAGAA+GGG 0.643236 2_2:-23321331 None:intergenic
TACCCTTATTGGCCAAACCA+AGG 0.646502 2_2:+23323879 Msa0244640:CDS
GAAGAGGTGTGATTTGTGCA+TGG 0.654069 2_2:-23320980 None:intergenic
TGCATGATTGTTGTCCGCGA+CGG 0.659605 2_2:-23323992 None:intergenic
TGTTGCAGGAGAATGTTCCA+TGG 0.660728 2_2:+23324210 Msa0244640:CDS
CTCAAGCTCATCAAAGAAGG+GGG 0.661271 2_2:+23321219 Msa0244640:CDS
CTAGTTATCAAAGTTACATG+AGG 0.668274 2_2:+23321993 Msa0244640:CDS
GCAAGAGACACTAACAGCCG+AGG 0.683106 2_2:+23320911 Msa0244640:CDS
CTTATACCTCGATTCCGTCG+CGG 0.713335 2_2:+23323978 Msa0244640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATTTTTATTTTAAATA+TGG + chr2_2:23322551-23322570 Msa0244640:intron 0.0%
!! TAAAAAAAATACAAAAAAGA+GGG + chr2_2:23322481-23322500 Msa0244640:intron 10.0%
!! TAAATGATTTAAAAATGATT+TGG - chr2_2:23323473-23323492 None:intergenic 10.0%
!! ATTTATCAAAACATATATGA+AGG + chr2_2:23322192-23322211 Msa0244640:intron 15.0%
!! CTAAAAAAAATACAAAAAAG+AGG + chr2_2:23322480-23322499 Msa0244640:intron 15.0%
!! AATATCATAAAGTAAAAACA+TGG + chr2_2:23322834-23322853 Msa0244640:intron 15.0%
!! CAATAATACACAAAATATAT+CGG - chr2_2:23323023-23323042 None:intergenic 15.0%
!!! AGTGTTTATTTGTTTAATTT+TGG + chr2_2:23323056-23323075 Msa0244640:intron 15.0%
!! ATGTAATTATAATTAAGTGT+TGG - chr2_2:23323413-23323432 None:intergenic 15.0%
!!! CAATTTAATGTTTTTTTTTC+AGG + chr2_2:23323728-23323747 Msa0244640:intron 15.0%
!!! TTAACAATTTGGATATTTTT+AGG - chr2_2:23325304-23325323 None:intergenic 15.0%
!! ATAATGAAAAGATTTGAAAG+AGG + chr2_2:23321662-23321681 Msa0244640:CDS 20.0%
!!! TAAGAATAAATAGTCCTTTT+TGG + chr2_2:23322154-23322173 Msa0244640:intron 20.0%
!!! TTGTTTTTTAGTTTCAACTT+AGG + chr2_2:23322248-23322267 Msa0244640:intron 20.0%
!! GTCTTTCATTAGTAAATTTA+TGG - chr2_2:23322300-23322319 None:intergenic 20.0%
!!! TTTTGTAATTTTGATACAGT+CGG + chr2_2:23322431-23322450 Msa0244640:intron 20.0%
!!! TTAATTTGTTTTGCAATTTG+TGG + chr2_2:23322622-23322641 Msa0244640:intron 20.0%
!!! TTACTTTATGATATTGCTTT+TGG - chr2_2:23322829-23322848 None:intergenic 20.0%
!!! CGATATATTTTGTGTATTAT+TGG + chr2_2:23323021-23323040 Msa0244640:intron 20.0%
!! AAAAGTTTAACATATATGTG+TGG - chr2_2:23323449-23323468 None:intergenic 20.0%
!! ATGATTAAAATGTTTCAACT+AGG - chr2_2:23323598-23323617 None:intergenic 20.0%
!! ATCATTAGATCAAAATTAGA+CGG + chr2_2:23323613-23323632 Msa0244640:intron 20.0%
!!! TGGACAATATGAATATTTTT+TGG - chr2_2:23324574-23324593 None:intergenic 20.0%
!! AAAATATTCATATTGTCCAA+TGG + chr2_2:23324575-23324594 Msa0244640:CDS 20.0%
!! AAAATTTAGTGTACAAGATA+AGG + chr2_2:23325090-23325109 Msa0244640:CDS 20.0%
!! TATAGTTTATACACTTTGTT+GGG + chr2_2:23325228-23325247 Msa0244640:CDS 20.0%
! TCCTTCTGTTAAAAACAATT+TGG + chr2_2:23321373-23321392 Msa0244640:CDS 25.0%
!!! TCCAAATTGTTTTTAACAGA+AGG - chr2_2:23321377-23321396 None:intergenic 25.0%
! AAAATCTTCTGAGTCTAATA+AGG + chr2_2:23321538-23321557 Msa0244640:CDS 25.0%
!!! TTGTTTTTGATGTTCTTTTG+AGG + chr2_2:23321573-23321592 Msa0244640:CDS 25.0%
!!! ATGTTATAAGAGTGTTGAAA+AGG + chr2_2:23321783-23321802 Msa0244640:CDS 25.0%
!! TATAGACTAAAGTACCAAAA+AGG - chr2_2:23322171-23322190 None:intergenic 25.0%
!!! GTGTATTTTGTTACTTAGTT+TGG + chr2_2:23322214-23322233 Msa0244640:intron 25.0%
! TTACTAACAAAACACGTTTA+AGG + chr2_2:23322404-23322423 Msa0244640:intron 25.0%
! ATGATAAGTGTTTATGTGAA+AGG + chr2_2:23322599-23322618 Msa0244640:intron 25.0%
! TATTTAAGAGAATGAAACGT+TGG - chr2_2:23322889-23322908 None:intergenic 25.0%
!!! GTTTAATTTTGGATGCTAAT+TGG + chr2_2:23323067-23323086 Msa0244640:intron 25.0%
!!! ATCAAAGTTTTTCAGTAACA+AGG + chr2_2:23323162-23323181 Msa0244640:CDS 25.0%
!!! TTGAGCTTCTTTTTCATAAT+TGG - chr2_2:23323227-23323246 None:intergenic 25.0%
! TTTGTATTCTTGTACATGTT+GGG - chr2_2:23323345-23323364 None:intergenic 25.0%
!! TTTTGTATTCTTGTACATGT+TGG - chr2_2:23323346-23323365 None:intergenic 25.0%
!!! ATCTTATGTGATTTTTGACT+TGG + chr2_2:23323678-23323697 Msa0244640:intron 25.0%
!! AAGGGTATGATGAATTATAA+GGG - chr2_2:23323866-23323885 None:intergenic 25.0%
!! TAAGGGTATGATGAATTATA+AGG - chr2_2:23323867-23323886 None:intergenic 25.0%
! ATAATTCATCATACCCTTAT+TGG + chr2_2:23323868-23323887 Msa0244640:CDS 25.0%
! TCAACAAAAGATATTGAACT+TGG - chr2_2:23323927-23323946 None:intergenic 25.0%
!!! TCATATATATAAAGTGTTGC+AGG + chr2_2:23324196-23324215 Msa0244640:CDS 25.0%
!!! CAATGAAAAGTTTGTTGTTT+TGG + chr2_2:23324466-23324485 Msa0244640:CDS 25.0%
!! CTTCTTTTATTACCTAAACA+AGG - chr2_2:23324722-23324741 None:intergenic 25.0%
!!! TTTTTCAAACAAGTTTAGAG+AGG + chr2_2:23325182-23325201 Msa0244640:CDS 25.0%
!! TTTTCAAACAAGTTTAGAGA+GGG + chr2_2:23325183-23325202 Msa0244640:CDS 25.0%
! GTATAGTTTATACACTTTGT+TGG + chr2_2:23325227-23325246 Msa0244640:CDS 25.0%
! ATAGTTTATACACTTTGTTG+GGG + chr2_2:23325229-23325248 Msa0244640:CDS 25.0%
! CCATTAAGTAGTTAACAATT+TGG - chr2_2:23325315-23325334 None:intergenic 25.0%
! CCAAATTGTTAACTACTTAA+TGG + chr2_2:23325312-23325331 Msa0244640:CDS 25.0%
! AGATGTAAAATGCAAGTAAT+AGG + chr2_2:23325377-23325396 Msa0244640:three_prime_UTR 25.0%
GCATTTCTTAAAGAAGAAGA+TGG - chr2_2:23321032-23321051 None:intergenic 30.0%
TCAACTTTAACACTCAAAAG+TGG - chr2_2:23321278-23321297 None:intergenic 30.0%
TCATAACTCTACTAACAGAA+GGG - chr2_2:23321334-23321353 None:intergenic 30.0%
AAATGGTTATGACTAAGAGA+AGG - chr2_2:23321443-23321462 None:intergenic 30.0%
AACCATTTCTTGAGTTCTTA+TGG + chr2_2:23321455-23321474 Msa0244640:CDS 30.0%
AACCATAAGAACTCAAGAAA+TGG - chr2_2:23321460-23321479 None:intergenic 30.0%
TTCTTGAGTTCTTATGGTTA+TGG + chr2_2:23321461-23321480 Msa0244640:CDS 30.0%
!! GACTCAGAAGATTTTAAGAA+AGG - chr2_2:23321533-23321552 None:intergenic 30.0%
AAGAAAAACACTGTGATAGT+TGG + chr2_2:23321602-23321621 Msa0244640:CDS 30.0%
GATACAGTTTCTTTAACTGA+AGG + chr2_2:23321626-23321645 Msa0244640:CDS 30.0%
! ACTCATTTTGTGAAGTTTCA+TGG + chr2_2:23321710-23321729 Msa0244640:CDS 30.0%
!! TATAAGAGTGTTGAAAAGGA+AGG + chr2_2:23321787-23321806 Msa0244640:CDS 30.0%
GTTAGTGATTATGTTGCATT+AGG + chr2_2:23321809-23321828 Msa0244640:CDS 30.0%
! AGAGATTGTTGATTATGTTG+TGG + chr2_2:23321904-23321923 Msa0244640:CDS 30.0%
GATTATGTTGTGGAAGAAAT+AGG + chr2_2:23321914-23321933 Msa0244640:CDS 30.0%
GAAGAAATAGGAAAGTTGTT+TGG + chr2_2:23321926-23321945 Msa0244640:CDS 30.0%
CTAGTTATCAAAGTTACATG+AGG + chr2_2:23321993-23322012 Msa0244640:CDS 30.0%
!! TACCAACTTTTGAGAATCAA+TGG + chr2_2:23322029-23322048 Msa0244640:CDS 30.0%
AATTGTTGTCAATTGTCGTA+TGG - chr2_2:23322363-23322382 None:intergenic 30.0%
AATTTGTGGCTAAGTATGTA+CGG + chr2_2:23322636-23322655 Msa0244640:intron 30.0%
CAAAACCTCTTTAGACATTA+CGG + chr2_2:23322767-23322786 Msa0244640:intron 30.0%
! TTCACATGATGTTTTGTACA+AGG + chr2_2:23322791-23322810 Msa0244640:intron 30.0%
AAAAACTTTGATTCCAGCAT+AGG - chr2_2:23323154-23323173 None:intergenic 30.0%
!! AAAGTTTTTCAGTAACAAGG+AGG + chr2_2:23323165-23323184 Msa0244640:CDS 30.0%
ACTAGGATACGATAAATGTA+TGG - chr2_2:23323581-23323600 None:intergenic 30.0%
ATGATTCTGTTGGGAAAAAA+AGG + chr2_2:23324321-23324340 Msa0244640:CDS 30.0%
! AGTTGAAATGTTTTCTCAGA+TGG + chr2_2:23324379-23324398 Msa0244640:CDS 30.0%
! CCAACAATCTTTTCAGAAAA+GGG - chr2_2:23324434-23324453 None:intergenic 30.0%
!! CCTTTTCTGAAAAGATTGTT+GGG + chr2_2:23324432-23324451 Msa0244640:CDS 30.0%
!!! TTGGTTGAAAATGCTGATTT+TGG + chr2_2:23324485-23324504 Msa0244640:CDS 30.0%
! AGCAAGCATTTTCCTTAAAA+GGG - chr2_2:23324516-23324535 None:intergenic 30.0%
! GAATTTGAGATTGCAAAGTT+TGG + chr2_2:23324539-23324558 Msa0244640:CDS 30.0%
! ATTGCAAAGTTTGGAACTTT+AGG + chr2_2:23324548-23324567 Msa0244640:CDS 30.0%
ATATTCATATTGTCCAATGG+TGG + chr2_2:23324578-23324597 Msa0244640:CDS 30.0%
!!! GATTTTGATGATGATGAAGA+TGG - chr2_2:23324698-23324717 None:intergenic 30.0%
! TCATCAAAATCACCTTGTTT+AGG + chr2_2:23324707-23324726 Msa0244640:CDS 30.0%
TTAGCAAGGTAAAAATTCCA+AGG + chr2_2:23324759-23324778 Msa0244640:CDS 30.0%
CAAGGATTGAAGAAAATGAA+GGG + chr2_2:23324777-23324796 Msa0244640:CDS 30.0%
CTTGTCAAATCACTTGAAAT+TGG - chr2_2:23324917-23324936 None:intergenic 30.0%
GATTTGACAAGAGAAACATT+AGG + chr2_2:23324926-23324945 Msa0244640:CDS 30.0%
CAAATTCTCAATTGAGTCTA+GGG - chr2_2:23324975-23324994 None:intergenic 30.0%
ACAAATTCTCAATTGAGTCT+AGG - chr2_2:23324976-23324995 None:intergenic 30.0%
TGACAAAGATGTTTATGTCA+AGG + chr2_2:23325032-23325051 Msa0244640:CDS 30.0%
GACAAAGATGTTTATGTCAA+GGG + chr2_2:23325033-23325052 Msa0244640:CDS 30.0%
CTAACAACATGTTTGAGAAA+TGG + chr2_2:23325149-23325168 Msa0244640:CDS 30.0%
ATGTTTGAGAAATGGCTAAA+AGG + chr2_2:23325157-23325176 Msa0244640:CDS 30.0%
TGGTAAAGAGGATAGAAAAT+GGG + chr2_2:23325252-23325271 Msa0244640:CDS 30.0%
!! ATTGATCATATCACTGACTT+TGG + chr2_2:23325335-23325354 Msa0244640:exon 30.0%
AAAGGTGAAGTAGTAGTAGT+TGG - chr2_2:23321140-23321159 None:intergenic 35.0%
ATGAGTGCATTAGAAAGAGA+AGG - chr2_2:23321182-23321201 None:intergenic 35.0%
CTCATAACTCTACTAACAGA+AGG - chr2_2:23321335-23321354 None:intergenic 35.0%
! TCTTTAACTGAAGGACTAGT+TGG + chr2_2:23321635-23321654 Msa0244640:CDS 35.0%
!! TGAGTTGTTTTCATCTCATC+AGG - chr2_2:23321695-23321714 None:intergenic 35.0%
GATTATGTTGCATTAGGTGT+TGG + chr2_2:23321815-23321834 Msa0244640:CDS 35.0%
!! GTTGGAGCTATTTTCTATGT+TGG + chr2_2:23321833-23321852 Msa0244640:CDS 35.0%
TCTATGTTGGAGATTTGAAG+TGG + chr2_2:23321846-23321865 Msa0244640:CDS 35.0%
!! TGGATAGTGGATGATAATGA+TGG + chr2_2:23321866-23321885 Msa0244640:CDS 35.0%
! GAAAGTTGTTTGGTGAAGAA+GGG + chr2_2:23321936-23321955 Msa0244640:CDS 35.0%
GGAACAAGAATGGTAAGATT+TGG + chr2_2:23321957-23321976 Msa0244640:CDS 35.0%
! TTACATGAGGTGTCAAATGA+GGG + chr2_2:23322006-23322025 Msa0244640:CDS 35.0%
!! CACCATTGATTCTCAAAAGT+TGG - chr2_2:23322034-23322053 None:intergenic 35.0%
GTTTGAGTCTTCATTCATCA+AGG + chr2_2:23322089-23322108 Msa0244640:CDS 35.0%
ATGTCTTCCGTGAATCATTT+CGG + chr2_2:23322273-23322292 Msa0244640:intron 35.0%
TTATGGTCCGAAATGATTCA+CGG - chr2_2:23322283-23322302 None:intergenic 35.0%
!! AAAAGCATTGTTGGTTGGTA+AGG + chr2_2:23322690-23322709 Msa0244640:intron 35.0%
CAAAACAAAGTGAAGCAGAA+AGG - chr2_2:23322737-23322756 None:intergenic 35.0%
TGAATCCGTAATGTCTAAAG+AGG - chr2_2:23322775-23322794 None:intergenic 35.0%
ACGCATTAATTAACCTAGAC+CGG - chr2_2:23323516-23323535 None:intergenic 35.0%
! TTGGCGTATGTTTGAAATAG+TGG + chr2_2:23323697-23323716 Msa0244640:intron 35.0%
!!! GTTCCACTTTTTGTTCAACT+GGG - chr2_2:23323763-23323782 None:intergenic 35.0%
!!! TGTTCCACTTTTTGTTCAAC+TGG - chr2_2:23323764-23323783 None:intergenic 35.0%
ACAAACAACCTCAAAACCAT+TGG + chr2_2:23323808-23323827 Msa0244640:CDS 35.0%
AACTATGATTGTTGCTCCAA+TGG - chr2_2:23323827-23323846 None:intergenic 35.0%
ATAAGGGTAGATCTTTGCAT+TGG - chr2_2:23323850-23323869 None:intergenic 35.0%
AAGATACTACTACCTTGGTT+TGG - chr2_2:23323894-23323913 None:intergenic 35.0%
!! GATATTGAACTTGGTGTATC+TGG - chr2_2:23323918-23323937 None:intergenic 35.0%
ATAAGGTTTGAGCTATAAGC+TGG - chr2_2:23323963-23323982 None:intergenic 35.0%
ATCATTGAAGCTGAACTCAA+TGG - chr2_2:23324018-23324037 None:intergenic 35.0%
AAACCAAGTAACAACAACCT+TGG + chr2_2:23324052-23324071 Msa0244640:CDS 35.0%
TTGGAGTTGGATTCTCTTAA+GGG + chr2_2:23324071-23324090 Msa0244640:CDS 35.0%
CTTGGAAATTCAACATTCAG+TGG + chr2_2:23324131-23324150 Msa0244640:CDS 35.0%
TGGTTCAGATCAGAAAAAGA+TGG + chr2_2:23324151-23324170 Msa0244640:CDS 35.0%
TAGTTCAATAGCAGAAGCTT+TGG + chr2_2:23324247-23324266 Msa0244640:CDS 35.0%
! GGTTGATTCCAAATCATCAA+AGG + chr2_2:23324268-23324287 Msa0244640:CDS 35.0%
! AGCACATTCCTTTGATGATT+TGG - chr2_2:23324279-23324298 None:intergenic 35.0%
TTGCAAGGAAATGATTCTGT+TGG + chr2_2:23324311-23324330 Msa0244640:CDS 35.0%
TGCAAGGAAATGATTCTGTT+GGG + chr2_2:23324312-23324331 Msa0244640:CDS 35.0%
TTCTGTTGGGAAAAAAAGGT+TGG + chr2_2:23324325-23324344 Msa0244640:CDS 35.0%
!! CCCTTTTCTGAAAAGATTGT+TGG + chr2_2:23324431-23324450 Msa0244640:CDS 35.0%
! CCCAACAATCTTTTCAGAAA+AGG - chr2_2:23324435-23324454 None:intergenic 35.0%
!! ATTTTGGTGACACCCTTTTA+AGG + chr2_2:23324501-23324520 Msa0244640:CDS 35.0%
! CAGCAAGCATTTTCCTTAAA+AGG - chr2_2:23324517-23324536 None:intergenic 35.0%
TGTCAATGAAGATCAGAAGA+AGG + chr2_2:23324607-23324626 Msa0244640:CDS 35.0%
GATGGTGATAACTCAAAAGT+TGG - chr2_2:23324680-23324699 None:intergenic 35.0%
!! TGAACTTGACTTGTTTAGCA+AGG + chr2_2:23324745-23324764 Msa0244640:CDS 35.0%
! CCTTCATTTTCTTCAATCCT+TGG - chr2_2:23324779-23324798 None:intergenic 35.0%
CCAAGGATTGAAGAAAATGA+AGG + chr2_2:23324776-23324795 Msa0244640:CDS 35.0%
AGAAGATGAAGACTATGATG+AGG + chr2_2:23324880-23324899 Msa0244640:CDS 35.0%
GAAGATGAAGACTATGATGA+GGG + chr2_2:23324881-23324900 Msa0244640:CDS 35.0%
AAGGGTAAAAGAGTCATTTG+AGG + chr2_2:23325051-23325070 Msa0244640:CDS 35.0%
! AGTCATTTGAGGAGGTTTTT+GGG + chr2_2:23325062-23325081 Msa0244640:CDS 35.0%
TGTACAAGATAAGGTGATAG+AGG + chr2_2:23325099-23325118 Msa0244640:CDS 35.0%
GATAAGGTGATAGAGGAAAT+TGG + chr2_2:23325106-23325125 Msa0244640:CDS 35.0%
TGATAGAGGAAATTGGTGTA+GGG + chr2_2:23325113-23325132 Msa0244640:CDS 35.0%
ACAAGTTTAGAGAGGGTTAA+TGG + chr2_2:23325190-23325209 Msa0244640:CDS 35.0%
GTGGTAAAGAGGATAGAAAA+TGG + chr2_2:23325251-23325270 Msa0244640:CDS 35.0%
AGGATAGAAAATGGGATAGT+GGG + chr2_2:23325260-23325279 Msa0244640:CDS 35.0%
!! AAAATGGGATAGTGGGTTTA+TGG + chr2_2:23325267-23325286 Msa0244640:CDS 35.0%
!! AAATGGGATAGTGGGTTTAT+GGG + chr2_2:23325268-23325287 Msa0244640:CDS 35.0%
! TCAATCTTGAAGCACTCTCT+AGG + chr2_2:23320939-23320958 Msa0244640:CDS 40.0%
TCAAGAGCTCTACATTGAAG+AGG - chr2_2:23321086-23321105 None:intergenic 40.0%
AGCTCAAGCTCATCAAAGAA+GGG + chr2_2:23321217-23321236 Msa0244640:CDS 40.0%
AACAGAAGGGTCATCAAGAA+TGG - chr2_2:23321321-23321340 None:intergenic 40.0%
AGTAGAGTTATGAGAGAAGC+TGG + chr2_2:23321341-23321360 Msa0244640:CDS 40.0%
! TGGAGATTTGAAGTGGATAG+TGG + chr2_2:23321853-23321872 Msa0244640:CDS 40.0%
! GGAAAGTTGTTTGGTGAAGA+AGG + chr2_2:23321935-23321954 Msa0244640:CDS 40.0%
! GTTACATGAGGTGTCAAATG+AGG + chr2_2:23322005-23322024 Msa0244640:CDS 40.0%
GCTAAGTATGTACGGTATTC+TGG + chr2_2:23322644-23322663 Msa0244640:intron 40.0%
GTACGGTATTCTGGACTATA+TGG + chr2_2:23322653-23322672 Msa0244640:intron 40.0%
ATTCTGGACTATATGGCAGA+AGG + chr2_2:23322660-23322679 Msa0244640:intron 40.0%
!! CTGTGAAAAGCATTGTTGGT+TGG + chr2_2:23322685-23322704 Msa0244640:intron 40.0%
!! CATTGTTGGTTGGTAAGGTA+AGG + chr2_2:23322695-23322714 Msa0244640:intron 40.0%
TTGATTCCAGCATAGGAGAT+GGG - chr2_2:23323147-23323166 None:intergenic 40.0%
TTTGATTCCAGCATAGGAGA+TGG - chr2_2:23323148-23323167 None:intergenic 40.0%
ATGAAGGCAACAGATTCTTC+TGG - chr2_2:23323264-23323283 None:intergenic 40.0%
AGAAGAATCTGTTGCCTTCA+TGG + chr2_2:23323263-23323282 Msa0244640:CDS 40.0%
!! ACCGTTGATTTGAGATCAAC+CGG + chr2_2:23323494-23323513 Msa0244640:intron 40.0%
ACCGGTTGATCTCAAATCAA+CGG - chr2_2:23323498-23323517 None:intergenic 40.0%
TGACCCAGTTGAACAAAAAG+TGG + chr2_2:23323757-23323776 Msa0244640:CDS 40.0%
! TTTGAGGTTGTTTGTTCTGG+TGG - chr2_2:23323803-23323822 None:intergenic 40.0%
!!! GGTTTTGAGGTTGTTTGTTC+TGG - chr2_2:23323806-23323825 None:intergenic 40.0%
!! TTGTTGCTCCAATGGTTTTG+AGG - chr2_2:23323819-23323838 None:intergenic 40.0%
!! TACCTTGGTTTGGCCAATAA+GGG - chr2_2:23323884-23323903 None:intergenic 40.0%
GTTTGAGCTATAAGCTGGTT+TGG - chr2_2:23323958-23323977 None:intergenic 40.0%
! ACTCCAAGGTTGTTGTTACT+TGG - chr2_2:23324058-23324077 None:intergenic 40.0%
AGTAACAACAACCTTGGAGT+TGG + chr2_2:23324058-23324077 Msa0244640:CDS 40.0%
CTTAAGAGAATCCAACTCCA+AGG - chr2_2:23324072-23324091 None:intergenic 40.0%
CTTGGAGTTGGATTCTCTTA+AGG + chr2_2:23324070-23324089 Msa0244640:CDS 40.0%
GTTGGATTCTCTTAAGGGTA+TGG + chr2_2:23324076-23324095 Msa0244640:CDS 40.0%
! GATTCTCTTAAGGGTATGGA+AGG + chr2_2:23324080-23324099 Msa0244640:CDS 40.0%
GTAAAGACAACTCTTGCACT+TGG + chr2_2:23324113-23324132 Msa0244640:CDS 40.0%
CTAACTGTTTCACATTGCCA+TGG - chr2_2:23324230-23324249 None:intergenic 40.0%
! CATCAAAGGAATGTGCTACT+TGG + chr2_2:23324282-23324301 Msa0244640:CDS 40.0%
!!! GCTACTTGGTTGTTTTTGCA+AGG + chr2_2:23324296-23324315 Msa0244640:CDS 40.0%
GCAATTGCAGAATCAGTGTT+TGG + chr2_2:23324353-23324372 Msa0244640:CDS 40.0%
ATTGACAATACTGCCACCAT+TGG - chr2_2:23324594-23324613 None:intergenic 40.0%
GAAGGATTCAGTGATGAAGT+TGG + chr2_2:23324625-23324644 Msa0244640:CDS 40.0%
TCAAAGTCCAGCTAAGAACA+AGG + chr2_2:23325006-23325025 Msa0244640:CDS 40.0%
GTCATTTCCTTGTTCTTAGC+TGG - chr2_2:23325016-23325035 None:intergenic 40.0%
GGTAAAAGAGTCATTTGAGG+AGG + chr2_2:23325054-23325073 Msa0244640:CDS 40.0%
! GAGTCATTTGAGGAGGTTTT+TGG + chr2_2:23325061-23325080 Msa0244640:CDS 40.0%
GTGATAGAGGAAATTGGTGT+AGG + chr2_2:23325112-23325131 Msa0244640:CDS 40.0%
AGTTTAGAGAGGGTTAATGG+TGG + chr2_2:23325193-23325212 Msa0244640:CDS 40.0%
GTTTAGAGAGGGTTAATGGT+GGG + chr2_2:23325194-23325213 Msa0244640:CDS 40.0%
TTTAGAGAGGGTTAATGGTG+GGG + chr2_2:23325195-23325214 Msa0244640:CDS 40.0%
! GTTAATGGTGGGGGTAAAAA+TGG + chr2_2:23325205-23325224 Msa0244640:CDS 40.0%
GTTTATACACTTTGTTGGGG+TGG + chr2_2:23325232-23325251 Msa0244640:CDS 40.0%
GAGGATAGAAAATGGGATAG+TGG + chr2_2:23325259-23325278 Msa0244640:CDS 40.0%
!! TCACTGACTTTGGTTAGTAG+TGG + chr2_2:23325345-23325364 Msa0244640:three_prime_UTR 40.0%
!! CACTGACTTTGGTTAGTAGT+GGG + chr2_2:23325346-23325365 Msa0244640:three_prime_UTR 40.0%
! ACTGACTTTGGTTAGTAGTG+GGG + chr2_2:23325347-23325366 Msa0244640:three_prime_UTR 40.0%
CTTCAAGATTGAAGCAGCCT+CGG - chr2_2:23320931-23320950 None:intergenic 45.0%
! GAAGAGGTGTGATTTGTGCA+TGG - chr2_2:23320983-23321002 None:intergenic 45.0%
ACATGCTGTGGTTGAAGCAA+AGG - chr2_2:23321158-23321177 None:intergenic 45.0%
GAAAGAGAAGGAACATGCTG+TGG - chr2_2:23321170-23321189 None:intergenic 45.0%
GAGCTCAAGCTCATCAAAGA+AGG + chr2_2:23321216-23321235 Msa0244640:CDS 45.0%
GCTCAAGCTCATCAAAGAAG+GGG + chr2_2:23321218-23321237 Msa0244640:CDS 45.0%
CTCAAGCTCATCAAAGAAGG+GGG + chr2_2:23321219-23321238 Msa0244640:CDS 45.0%
GGTGAAGAAGGGAACAAGAA+TGG + chr2_2:23321947-23321966 Msa0244640:CDS 45.0%
!! GGCACTGTGAAAAGCATTGT+TGG + chr2_2:23322681-23322700 Msa0244640:intron 45.0%
TCAAAACCCATCTCCTATGC+TGG + chr2_2:23323138-23323157 Msa0244640:CDS 45.0%
CTATGAGACTGAAGCCATGA+AGG - chr2_2:23323280-23323299 None:intergenic 45.0%
! GATTTGAGATCAACCGGTCT+AGG + chr2_2:23323500-23323519 Msa0244640:intron 45.0%
TACCCTTATTGGCCAAACCA+AGG + chr2_2:23323879-23323898 Msa0244640:CDS 45.0%
!! CTACCTTGGTTTGGCCAATA+AGG - chr2_2:23323885-23323904 None:intergenic 45.0%
CTGGCAAGATACTACTACCT+TGG - chr2_2:23323899-23323918 None:intergenic 45.0%
TGTTGCAGGAGAATGTTCCA+TGG + chr2_2:23324210-23324229 Msa0244640:CDS 45.0%
TTAGAGAGGGTTAATGGTGG+GGG + chr2_2:23325196-23325215 Msa0244640:CDS 45.0%
ACTTTGTTGGGGTGGTAAAG+AGG + chr2_2:23325240-23325259 Msa0244640:CDS 45.0%
CTGACTTTGGTTAGTAGTGG+GGG + chr2_2:23325348-23325367 Msa0244640:three_prime_UTR 45.0%
CTAGGCTTAGCACGTAGAAG+AGG + chr2_2:23320957-23320976 Msa0244640:CDS 50.0%
AGTGTAGCAGCAACGTGAAG+AGG - chr2_2:23320999-23321018 None:intergenic 50.0%
CAAGCTGTTCCTGTTCCATC+TGG + chr2_2:23322058-23322077 Msa0244640:CDS 50.0%
CTCAAACCAAGTCCACCAGA+TGG - chr2_2:23322076-23322095 None:intergenic 50.0%
GGCAACAGATTCTTCTGGTC+TGG - chr2_2:23323259-23323278 None:intergenic 50.0%
TAGCACACAAGCACGTCAGA+AGG + chr2_2:23323297-23323316 Msa0244640:CDS 50.0%
CTTATACCTCGATTCCGTCG+CGG + chr2_2:23323978-23323997 Msa0244640:CDS 50.0%
TGCATGATTGTTGTCCGCGA+CGG - chr2_2:23323995-23324014 None:intergenic 50.0%
GAGGAAATTGGTGTAGGGTG+TGG + chr2_2:23325118-23325137 Msa0244640:CDS 50.0%
! ACTTTGGTTAGTAGTGGGGG+TGG + chr2_2:23325351-23325370 Msa0244640:three_prime_UTR 50.0%
GCAAGAGACACTAACAGCCG+AGG + chr2_2:23320911-23320930 Msa0244640:CDS 55.0%
GTGGTTGCTGCTGTTGCTGT+TGG - chr2_2:23321259-23321278 None:intergenic 55.0%
GCTGTTCCTGTTCCATCTGG+TGG + chr2_2:23322061-23322080 Msa0244640:CDS 55.0%
CCAAGTCCACCAGATGGAAC+AGG - chr2_2:23322070-23322089 None:intergenic 55.0%
!! CCTGTTCCATCTGGTGGACT+TGG + chr2_2:23322067-23322086 Msa0244640:CDS 55.0%
CGCGACGGAATCGAGGTATA+AGG - chr2_2:23323980-23323999 None:intergenic 55.0%
TGTTGTCCGCGACGGAATCG+AGG - chr2_2:23323987-23324006 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 23320878 23325414 23320878 ID=Msa0244640;Name=Msa0244640
chr2_2 mRNA 23320878 23325414 23320878 ID=Msa0244640-mRNA-1;Parent=Msa0244640;Name=Msa0244640-mRNA-1;_AED=0.01;_eAED=0.01;_QI=10|1|1|1|1|1|3|75|1006
chr2_2 exon 23320878 23322110 23320878 ID=Msa0244640-mRNA-1:exon:8897;Parent=Msa0244640-mRNA-1
chr2_2 exon 23323111 23323318 23323111 ID=Msa0244640-mRNA-1:exon:8898;Parent=Msa0244640-mRNA-1
chr2_2 exon 23323750 23325414 23323750 ID=Msa0244640-mRNA-1:exon:8899;Parent=Msa0244640-mRNA-1
chr2_2 five_prime_UTR 23320878 23320887 23320878 ID=Msa0244640-mRNA-1:five_prime_utr;Parent=Msa0244640-mRNA-1
chr2_2 CDS 23320888 23322110 23320888 ID=Msa0244640-mRNA-1:cds;Parent=Msa0244640-mRNA-1
chr2_2 CDS 23323111 23323318 23323111 ID=Msa0244640-mRNA-1:cds;Parent=Msa0244640-mRNA-1
chr2_2 CDS 23323750 23325339 23323750 ID=Msa0244640-mRNA-1:cds;Parent=Msa0244640-mRNA-1
chr2_2 three_prime_UTR 23325340 23325414 23325340 ID=Msa0244640-mRNA-1:three_prime_utr;Parent=Msa0244640-mRNA-1
Gene Sequence

>Msa0244640

ATGCGCTCAGGAGCTTATACATTGCAAGAGACACTAACAGCCGAGGCTGCTTCAATCTTGAAGCACTCTCTAGGCTTAGCACGTAGAAGAGGCCATGCACAAATCACACCTCTTCACGTTGCTGCTACACTTTTGAGTTTACCATCTTCTTCTTTAAGAAATGCATGTCTCAAATCTCAACAACAAAATAATCATCCTCTTCAATGTAGAGCTCTTGAACTTTGCTTCAATGTTGCTCTTAATAGACTTCCAACTACTACTACTTCACCTTTGCTTCAACCACAGCATGTTCCTTCTCTTTCTAATGCACTCATTGCTGCTCTTAAAAGAGCTCAAGCTCATCAAAGAAGGGGGTGTATTGAGCAAAACCAACAGCAACAGCAGCAACCACTTTTGAGTGTTAAAGTTGAACTTGATCAGCTTATTCTTTCCATTCTTGATGACCCTTCTGTTAGTAGAGTTATGAGAGAAGCTGGTTTTTCTAGTCCTTCTGTTAAAAACAATTTGGAAAACTCTTCAACTTTATTAAACTCTTCTGTTTTTCATTCTTCACCTTCTCTTAGTCATAACCATTTCTTGAGTTCTTATGGTTATGGTTCTGTTCTCTTTTCTTCACAGAAGAAAGAACAAGTAGTATATCATCCTTTCTTAAAATCTTCTGAGTCTAATAAGGAAGATATTAATCTTGTTTTTGATGTTCTTTTGAGGAAGAAGAAGAAAAACACTGTGATAGTTGGTGATACAGTTTCTTTAACTGAAGGACTAGTTGGTGAAATAATGAAAAGATTTGAAAGAGGTGAAGTACCTGATGAGATGAAAACAACTCATTTTGTGAAGTTTCATGGACTTAGTTCAGTTTCTTTGAAGTATATGAAAAAAGAAGAAGTTGAAATGAATGTTATAAGAGTGTTGAAAAGGAAGGTTAGTGATTATGTTGCATTAGGTGTTGGAGCTATTTTCTATGTTGGAGATTTGAAGTGGATAGTGGATGATAATGATGGAAGTTTGAATGAAAAAGAGATTGTTGATTATGTTGTGGAAGAAATAGGAAAGTTGTTTGGTGAAGAAGGGAACAAGAATGGTAAGATTTGGCTTGTTGCAACATCTAGTTATCAAAGTTACATGAGGTGTCAAATGAGGGTACCAACTTTTGAGAATCAATGGTGTCTTCAAGCTGTTCCTGTTCCATCTGGTGGACTTGGTTTGAGTCTTCATTCATCAAGTGTGCATGATTCAAAAATGAGCATCTCTCAAAACCCATCTCCTATGCTGGAATCAAAGTTTTTCAGTAACAAGGAGGAACATGAGAAGCTTAATTGCTGTGAAGAGTGTGTCTCCAATTATGAAAAAGAAGCTCAATTGTTCAAACCAGACCAGAAGAATCTGTTGCCTTCATGGCTTCAGTCTCATAGCACACAAGCACGTCAGAAGGATGAATTGACCCAGTTGAACAAAAAGTGGAACAGATTGTGTCAATGTCTCCACCAGAACAAACAACCTCAAAACCATTGGAGCAACAATCATAGTTCCAATGCAAAGATCTACCCTTATAATTCATCATACCCTTATTGGCCAAACCAAGGTAGTAGTATCTTGCCAGATACACCAAGTTCAATATCTTTTGTTGATTCTGCAACCAAACCAGCTTATAGCTCAAACCTTATACCTCGATTCCGTCGCGGACAACAATCATGCACCATTGAGTTCAGCTTCAATGATGAAAAAGCACAGAAAAACCAAGTAACAACAACCTTGGAGTTGGATTCTCTTAAGGGTATGGAAGGTACTAAAGAAGTAAAGACAACTCTTGCACTTGGAAATTCAACATTCAGTGGTTCAGATCAGAAAAAGATGGAAAATTTAACACTGCAAAGAGATCATATATATAAAGTGTTGCAGGAGAATGTTCCATGGCAATGTGAAACAGTTAGTTCAATAGCAGAAGCTTTGGTTGATTCCAAATCATCAAAGGAATGTGCTACTTGGTTGTTTTTGCAAGGAAATGATTCTGTTGGGAAAAAAAGGTTGGCACTTGCAATTGCAGAATCAGTGTTTGGATCAGTTGAAATGTTTTCTCAGATGGATATGATGAAGAGAGAGAATGCAGAGACACCCTTTTCTGAAAAGATTGTTGGGCTATTGAAAAACAATGAAAAGTTTGTTGTTTTGGTTGAAAATGCTGATTTTGGTGACACCCTTTTAAGGAAAATGCTTGCTGATGAATTTGAGATTGCAAAGTTTGGAACTTTAGGCCAAAAAATATTCATATTGTCCAATGGTGGCAGTATTGTCAATGAAGATCAGAAGAAGGATTCAGTGATGAAGTTGGTTTTGAAGATTAGTGAAACTGAGAAAAAACCAACTTTTGAGTTATCACCATCTTCATCATCATCAAAATCACCTTGTTTAGGTAATAAAAGAAGTGCTGAACTTGACTTGTTTAGCAAGGTAAAAATTCCAAGGATTGAAGAAAATGAAGGGAACAAGAAGATAGAATTTTCATTTTCAAGACAATCAAGCTTCAACAACACTCTTGATTTGAATATGAAAGCTGATGAAGAAGAAGATGAAGACTATGATGAGGGAGAAAATAGTCCAATTTCAAGTGATTTGACAAGAGAAACATTAGGAGAACATTTGATCTCAAATGAGTCCCTAGACTCAATTGAGAATTTGTTTGAGTTCAATCAAAGTCCAGCTAAGAACAAGGAAATGACAAAGATGTTTATGTCAAGGGTAAAAGAGTCATTTGAGGAGGTTTTTGGGAATGTAAAATTTAGTGTACAAGATAAGGTGATAGAGGAAATTGGTGTAGGGTGTGGTTCTTTTACTAACAACATGTTTGAGAAATGGCTAAAAGGCATTTTTCAAACAAGTTTAGAGAGGGTTAATGGTGGGGGTAAAAATGGTATAGTTTATACACTTTGTTGGGGTGGTAAAGAGGATAGAAAATGGGATAGTGGGTTTATGGGTTCATGTTTGCCTAAAAATATCCAAATTGTTAACTACTTAATGGATTGA

Protein sequence

>Msa0244640

MRSGAYTLQETLTAEAASILKHSLGLARRRGHAQITPLHVAATLLSLPSSSLRNACLKSQQQNNHPLQCRALELCFNVALNRLPTTTTSPLLQPQHVPSLSNALIAALKRAQAHQRRGCIEQNQQQQQQPLLSVKVELDQLILSILDDPSVSRVMREAGFSSPSVKNNLENSSTLLNSSVFHSSPSLSHNHFLSSYGYGSVLFSSQKKEQVVYHPFLKSSESNKEDINLVFDVLLRKKKKNTVIVGDTVSLTEGLVGEIMKRFERGEVPDEMKTTHFVKFHGLSSVSLKYMKKEEVEMNVIRVLKRKVSDYVALGVGAIFYVGDLKWIVDDNDGSLNEKEIVDYVVEEIGKLFGEEGNKNGKIWLVATSSYQSYMRCQMRVPTFENQWCLQAVPVPSGGLGLSLHSSSVHDSKMSISQNPSPMLESKFFSNKEEHEKLNCCEECVSNYEKEAQLFKPDQKNLLPSWLQSHSTQARQKDELTQLNKKWNRLCQCLHQNKQPQNHWSNNHSSNAKIYPYNSSYPYWPNQGSSILPDTPSSISFVDSATKPAYSSNLIPRFRRGQQSCTIEFSFNDEKAQKNQVTTTLELDSLKGMEGTKEVKTTLALGNSTFSGSDQKKMENLTLQRDHIYKVLQENVPWQCETVSSIAEALVDSKSSKECATWLFLQGNDSVGKKRLALAIAESVFGSVEMFSQMDMMKRENAETPFSEKIVGLLKNNEKFVVLVENADFGDTLLRKMLADEFEIAKFGTLGQKIFILSNGGSIVNEDQKKDSVMKLVLKISETEKKPTFELSPSSSSSKSPCLGNKRSAELDLFSKVKIPRIEENEGNKKIEFSFSRQSSFNNTLDLNMKADEEEDEDYDEGENSPISSDLTRETLGEHLISNESLDSIENLFEFNQSPAKNKEMTKMFMSRVKESFEEVFGNVKFSVQDKVIEEIGVGCGSFTNNMFEKWLKGIFQTSLERVNGGGKNGIVYTLCWGGKEDRKWDSGFMGSCLPKNIQIVNYLMD*