Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1106750 | XP_013448940.1 | 93.713 | 509 | 32 | 0 | 3 | 511 | 2 | 510 | 0.0 | 1006 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1106750 | A0A072U016 | 93.713 | 509 | 32 | 0 | 3 | 511 | 2 | 510 | 0.0 | 1006 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024280 | Msa1106750 | 0.804771 | 1.841019e-49 | -8.615850e-47 |
| Msa0128730 | Msa1106750 | 0.808940 | 2.418931e-50 | -8.615850e-47 |
| Msa0163340 | Msa1106750 | 0.812397 | 4.327682e-51 | -8.615850e-47 |
| Msa1021620 | Msa1106750 | 0.842348 | 2.731453e-58 | -8.615850e-47 |
| Msa1022580 | Msa1106750 | 0.908931 | 9.964283e-82 | -8.615850e-47 |
| Msa1106750 | Msa1149020 | 0.801136 | 1.038133e-48 | -8.615850e-47 |
| Msa1106750 | Msa1150150 | 0.857992 | 1.118597e-62 | -8.615850e-47 |
| Msa1106750 | Msa1323120 | 0.819210 | 1.308758e-52 | -8.615850e-47 |
| Msa0913550 | Msa1106750 | 0.825904 | 3.633631e-54 | -8.615850e-47 |
| Msa0951150 | Msa1106750 | 0.829596 | 4.712932e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1106750 | MtrunA17_Chr7g0239421 | 93.713 | 509 | 32 | 0 | 3 | 511 | 2 | 510 | 0.0 | 1006 |
| Msa1106750 | MtrunA17_Chr3g0112211 | 50.509 | 491 | 221 | 9 | 21 | 509 | 18 | 488 | 3.76e-173 | 497 |
| Msa1106750 | MtrunA17_Chr8g0348511 | 45.588 | 476 | 239 | 7 | 40 | 508 | 25 | 487 | 1.19e-139 | 411 |
| Msa1106750 | MtrunA17_Chr2g0327551 | 46.618 | 414 | 196 | 4 | 82 | 484 | 34 | 433 | 2.49e-132 | 391 |
| Msa1106750 | MtrunA17_Chr8g0387371 | 45.346 | 419 | 199 | 6 | 82 | 486 | 94 | 496 | 1.83e-130 | 389 |
| Msa1106750 | MtrunA17_Chr4g0030331 | 52.786 | 341 | 158 | 2 | 82 | 421 | 96 | 434 | 8.83e-130 | 387 |
| Msa1106750 | MtrunA17_Chr4g0024001 | 41.487 | 417 | 230 | 6 | 93 | 509 | 74 | 476 | 1.27e-118 | 357 |
| Msa1106750 | MtrunA17_Chr4g0023991 | 44.524 | 420 | 220 | 7 | 93 | 508 | 63 | 473 | 1.66e-115 | 349 |
| Msa1106750 | MtrunA17_Chr5g0395861 | 41.667 | 396 | 226 | 4 | 90 | 482 | 122 | 515 | 2.65e-106 | 327 |
| Msa1106750 | MtrunA17_Chr2g0322991 | 42.005 | 419 | 227 | 7 | 91 | 502 | 55 | 464 | 1.13e-104 | 321 |
| Msa1106750 | MtrunA17_Chr7g0248241 | 58.128 | 203 | 85 | 0 | 90 | 292 | 88 | 290 | 7.00e-78 | 246 |
| Msa1106750 | MtrunA17_Chr5g0397301 | 55.122 | 205 | 90 | 1 | 89 | 293 | 78 | 280 | 1.13e-73 | 235 |
| Msa1106750 | MtrunA17_Chr5g0397311 | 40.092 | 217 | 106 | 5 | 294 | 499 | 22 | 225 | 2.44e-46 | 161 |
| Msa1106750 | MtrunA17_Chr7g0248231 | 49.219 | 128 | 64 | 1 | 294 | 420 | 4 | 131 | 9.14e-37 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1106750 | AT2G37730.1 | 58.103 | 506 | 199 | 5 | 16 | 511 | 12 | 514 | 0.0 | 617 |
| Msa1106750 | AT3G11420.1 | 48.178 | 494 | 243 | 8 | 20 | 508 | 20 | 505 | 4.97e-154 | 449 |
| Msa1106750 | AT5G41460.1 | 50.503 | 398 | 183 | 8 | 93 | 483 | 110 | 500 | 1.37e-133 | 397 |
| Msa1106750 | AT4G11350.1 | 44.581 | 489 | 222 | 13 | 34 | 499 | 35 | 497 | 3.44e-132 | 393 |
| Msa1106750 | AT4G23490.1 | 46.353 | 425 | 201 | 6 | 89 | 499 | 105 | 516 | 1.99e-131 | 392 |
| Msa1106750 | AT1G01570.1 | 45.794 | 428 | 218 | 8 | 69 | 484 | 27 | 452 | 3.60e-125 | 374 |
| Msa1106750 | AT1G01570.2 | 45.794 | 428 | 218 | 8 | 69 | 484 | 58 | 483 | 1.08e-124 | 374 |
| Msa1106750 | AT4G15240.1 | 44.499 | 409 | 214 | 5 | 93 | 498 | 78 | 476 | 2.09e-116 | 352 |
| Msa1106750 | AT1G07850.1 | 47.475 | 396 | 198 | 6 | 93 | 484 | 123 | 512 | 7.36e-114 | 347 |
| Msa1106750 | AT4G00295.1 | 49.721 | 358 | 166 | 6 | 76 | 419 | 55 | 412 | 2.72e-113 | 343 |
| Msa1106750 | AT1G05280.1 | 40.141 | 426 | 241 | 7 | 92 | 508 | 67 | 487 | 1.67e-107 | 329 |
| Msa1106750 | AT1G33250.1 | 41.476 | 393 | 223 | 5 | 94 | 482 | 130 | 519 | 1.31e-105 | 326 |
| Msa1106750 | AT1G05280.2 | 43.785 | 354 | 191 | 4 | 92 | 437 | 67 | 420 | 3.09e-102 | 315 |
| Msa1106750 | AT5G12460.1 | 39.671 | 426 | 234 | 8 | 90 | 509 | 33 | 441 | 4.04e-102 | 314 |
| Msa1106750 | AT4G11350.2 | 49.077 | 271 | 115 | 8 | 34 | 293 | 35 | 293 | 5.82e-75 | 239 |
Find 114 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCGCAGCATTGTCTTCT+TGG | 0.142429 | 7_3:+47292675 | None:intergenic |
| CGTTCCATGTTTGGGAAAAT+TGG | 0.160263 | 7_3:+47293859 | None:intergenic |
| CTCTTTAGCTGTTGCTAAAT+AGG | 0.169545 | 7_3:+47293702 | None:intergenic |
| CAAAGTTGCATTAGTGAAAT+TGG | 0.179177 | 7_3:-47294749 | Msa1106750:CDS |
| GATCGTTATTCTGAGTATTA+TGG | 0.235245 | 7_3:-47294788 | Msa1106750:CDS |
| GGCGGAGCTTGTGAAGATTT+TGG | 0.263838 | 7_3:-47294822 | Msa1106750:CDS |
| GAAGAGATCATTGGATTTGA+TGG | 0.267371 | 7_3:+47295495 | None:intergenic |
| GGTCGGGTATTAAAAGTAAA+TGG | 0.275509 | 7_3:+47293628 | None:intergenic |
| CTTCGCCAGATTCTATGATT+AGG | 0.294698 | 7_3:+47295326 | None:intergenic |
| GTGTGACAAGGTTGATTATA+AGG | 0.297026 | 7_3:-47293488 | Msa1106750:CDS |
| CTGATGAAAACCAGGTTCTT+TGG | 0.305345 | 7_3:+47294715 | None:intergenic |
| AAAAGATATGATGATGGTTC+AGG | 0.309105 | 7_3:-47293517 | Msa1106750:CDS |
| GCATCAACACGTTCCATGTT+TGG | 0.317875 | 7_3:+47293850 | None:intergenic |
| CATAATCAAATGTACTATAT+TGG | 0.321611 | 7_3:-47294935 | Msa1106750:CDS |
| TCTTTAGCTGTTGCTAAATA+GGG | 0.326584 | 7_3:+47293703 | None:intergenic |
| ATGGATCGGATTGAGGGTTT+TGG | 0.334021 | 7_3:-47293565 | Msa1106750:CDS |
| TTCGCCAGATTCTATGATTA+GGG | 0.363897 | 7_3:+47295327 | None:intergenic |
| CATCAACACGTTCCATGTTT+GGG | 0.372831 | 7_3:+47293851 | None:intergenic |
| AACACCGTAACGAGGTTGTC+GGG | 0.384605 | 7_3:+47294971 | None:intergenic |
| GCGGGTTTGGAACATTTGTT+TGG | 0.387276 | 7_3:+47295360 | None:intergenic |
| GTGTCGGCAGAGACTTTATA+TGG | 0.412392 | 7_3:+47295130 | None:intergenic |
| ATTGGTCAATATCAATATCA+TGG | 0.414518 | 7_3:-47293747 | Msa1106750:CDS |
| TCAAGATCCGTGTGTGAAAC+CGG | 0.425631 | 7_3:-47293599 | Msa1106750:CDS |
| GTCGGGTATTAAAAGTAAAT+GGG | 0.428065 | 7_3:+47293629 | None:intergenic |
| TTATATGGTGGCGAAGTCTC+TGG | 0.436889 | 7_3:+47295145 | None:intergenic |
| TTCACAAGCTCCGCCGCTAA+AGG | 0.436962 | 7_3:+47294830 | None:intergenic |
| ATTGGATTTGATGGTGGGGA+AGG | 0.438539 | 7_3:+47295504 | None:intergenic |
| ACCATGGCTTATGGCGGCGG+AGG | 0.439626 | 7_3:-47294869 | Msa1106750:CDS |
| CATTTAAAACGTGGAAGACT+TGG | 0.440818 | 7_3:-47293660 | Msa1106750:CDS |
| AATGTAACCAATGGTGCAAC+TGG | 0.445911 | 7_3:+47293904 | None:intergenic |
| GAAGAGAGAGAAGAGATCAT+TGG | 0.447905 | 7_3:+47295486 | None:intergenic |
| AGCACATCCAGTTGCACCAT+TGG | 0.448551 | 7_3:-47293911 | Msa1106750:CDS |
| GAGATAATCAACAATGTAGA+TGG | 0.448839 | 7_3:-47292657 | Msa1106750:CDS |
| TCACAAGCTCCGCCGCTAAA+GGG | 0.449204 | 7_3:+47294831 | None:intergenic |
| AAAACCCTAATCATAGAATC+TGG | 0.456794 | 7_3:-47295331 | Msa1106750:CDS |
| TTCTCTCTCTTCCTCAAAGT+GGG | 0.460646 | 7_3:-47295475 | Msa1106750:CDS |
| AACAGCTAAAGAGCTTGAAA+TGG | 0.461484 | 7_3:-47293692 | Msa1106750:CDS |
| AGAGATGTTGGTCGGCTCTT+CGG | 0.463804 | 7_3:+47295303 | None:intergenic |
| TAATGTGAGGTGGTTTGTAA+TGG | 0.468209 | 7_3:-47295017 | Msa1106750:CDS |
| GTTAGTAACATCATACAAAT+CGG | 0.470667 | 7_3:-47293818 | Msa1106750:CDS |
| TTTAAATACACATGTTGGTA+TGG | 0.471541 | 7_3:-47295100 | Msa1106750:CDS |
| AAAGATATGATGATGGTTCA+GGG | 0.471625 | 7_3:-47293516 | Msa1106750:CDS |
| AACATCATACAAATCGGATC+CGG | 0.473625 | 7_3:-47293812 | Msa1106750:CDS |
| TGCTATAAGCTACCCTTTAG+CGG | 0.474080 | 7_3:-47294843 | Msa1106750:CDS |
| GGTCATAGCAAAATGATTGT+TGG | 0.474890 | 7_3:+47293779 | None:intergenic |
| TACACCATGGCTTATGGCGG+CGG | 0.480790 | 7_3:-47294872 | Msa1106750:CDS |
| TTGGATTTGATGGTGGGGAA+GGG | 0.484571 | 7_3:+47295505 | None:intergenic |
| TTGGTCAATATCAATATCAT+GGG | 0.486919 | 7_3:-47293746 | Msa1106750:CDS |
| ACACACGGATCTTGACTAAC+GGG | 0.488417 | 7_3:+47293607 | None:intergenic |
| GATATACGTGGTAACCCATA+TGG | 0.491335 | 7_3:-47293943 | Msa1106750:CDS |
| GGTCGGGGATTGACCCGGTC+CGG | 0.495472 | 7_3:-47293544 | Msa1106750:CDS |
| AAACAAAATGTGAGAGATGT+TGG | 0.496764 | 7_3:+47295291 | None:intergenic |
| CTTCCCCGACAACCTCGTTA+CGG | 0.497124 | 7_3:-47294975 | Msa1106750:CDS |
| AATGTGAGGTGGTTTGTAAT+GGG | 0.497788 | 7_3:-47295016 | Msa1106750:CDS |
| ATGGGAGATGAGAAAGATTG+TGG | 0.498344 | 7_3:+47295441 | None:intergenic |
| GCCACCAGAGTTCGTTGTAA+TGG | 0.499783 | 7_3:+47295230 | None:intergenic |
| AGATCATTGGATTTGATGGT+GGG | 0.501071 | 7_3:+47295499 | None:intergenic |
| TTTGCCTCATTATTGGAAAG+AGG | 0.503193 | 7_3:-47293422 | Msa1106750:intron |
| CGATCCATAAAATACACAAC+CGG | 0.503463 | 7_3:+47293580 | None:intergenic |
| AAATTGCTAGACCCACTTTG+AGG | 0.510114 | 7_3:+47295464 | None:intergenic |
| ATTACATCACTTAGACTATG+TGG | 0.512444 | 7_3:-47293884 | Msa1106750:CDS |
| GTCTAGCCACACAAAGCCTC+TGG | 0.514460 | 7_3:+47295195 | None:intergenic |
| GAGATCATTGGATTTGATGG+TGG | 0.521270 | 7_3:+47295498 | None:intergenic |
| CGGATCTTGACTAACGGGTC+GGG | 0.525035 | 7_3:+47293612 | None:intergenic |
| GTTGATTATAAGGTGGCTCA+TGG | 0.535895 | 7_3:-47293478 | Msa1106750:CDS |
| CTTCTCTCTCTTCCTCAAAG+TGG | 0.539279 | 7_3:-47295476 | Msa1106750:CDS |
| AATCAAATGTACTATATTGG+AGG | 0.539448 | 7_3:-47294932 | Msa1106750:CDS |
| TGTGCTGCTAGTAAGCCATA+TGG | 0.539704 | 7_3:+47293928 | None:intergenic |
| CACACACGGATCTTGACTAA+CGG | 0.540512 | 7_3:+47293606 | None:intergenic |
| CATACCTCTTTCCAATAATG+AGG | 0.541220 | 7_3:+47293418 | None:intergenic |
| GGATGATATTGAATAGTAGT+GGG | 0.546524 | 7_3:+47295381 | None:intergenic |
| TCGGCGGCTCTTCAGCTACA+TGG | 0.555386 | 7_3:-47295264 | Msa1106750:CDS |
| TGGATGATATTGAATAGTAG+TGG | 0.560860 | 7_3:+47295380 | None:intergenic |
| GTGCTGCTAGTAAGCCATAT+GGG | 0.563052 | 7_3:+47293929 | None:intergenic |
| CCCTCCGCCGCCATAAGCCA+TGG | 0.563703 | 7_3:+47294868 | None:intergenic |
| ACATCATACAAATCGGATCC+GGG | 0.564580 | 7_3:-47293811 | Msa1106750:CDS |
| ACGGATCTTGACTAACGGGT+CGG | 0.569910 | 7_3:+47293611 | None:intergenic |
| GTTCAGATTACCAAAGAACC+TGG | 0.570984 | 7_3:-47294725 | Msa1106750:CDS |
| TACACAACCGGTTTCACACA+CGG | 0.573621 | 7_3:+47293592 | None:intergenic |
| GATCATTGGATTTGATGGTG+GGG | 0.574733 | 7_3:+47295500 | None:intergenic |
| CAACACCGTAACGAGGTTGT+CGG | 0.582802 | 7_3:+47294970 | None:intergenic |
| CCATGGCTTATGGCGGCGGA+GGG | 0.583286 | 7_3:-47294868 | Msa1106750:CDS |
| ATTGATGATAAGTATGAGAA+AGG | 0.586884 | 7_3:+47295410 | None:intergenic |
| CATCGTTTAAATACACATGT+TGG | 0.586906 | 7_3:-47295105 | Msa1106750:CDS |
| CAATAATGAGGCAAAAGCAT+AGG | 0.587166 | 7_3:+47293430 | None:intergenic |
| GGTTATAAAAGATATGATGA+TGG | 0.594197 | 7_3:-47293523 | Msa1106750:CDS |
| GTATTTAAACGATGACGTGT+CGG | 0.597903 | 7_3:+47295114 | None:intergenic |
| GTGATCAATGTCAAAATCAG+AGG | 0.606553 | 7_3:-47292621 | Msa1106750:CDS |
| GTCGCCATTACAACGAACTC+TGG | 0.608547 | 7_3:-47295234 | Msa1106750:CDS |
| AATTAGGGTTAGATAATGTG+AGG | 0.609265 | 7_3:-47295030 | Msa1106750:CDS |
| ATATGATGATGGTTCAGGGA+AGG | 0.617134 | 7_3:-47293512 | Msa1106750:CDS |
| AAATGTACCTGATGAAAACC+AGG | 0.619010 | 7_3:+47294707 | None:intergenic |
| GAGGTTGTCGGGGAAGAAGA+CGG | 0.628561 | 7_3:+47294982 | None:intergenic |
| TTCAGGGAAGGAGTGTGACA+AGG | 0.630094 | 7_3:-47293500 | Msa1106750:CDS |
| TAGGGTTAGATAATGTGAGG+TGG | 0.632426 | 7_3:-47295027 | Msa1106750:CDS |
| GAGACCTTCTCATCAAACCA+TGG | 0.635804 | 7_3:-47295537 | Msa1106750:CDS |
| CATACAAATCGGATCCGGGT+CGG | 0.636300 | 7_3:-47293807 | Msa1106750:CDS |
| AAAATGTGAGAGATGTTGGT+CGG | 0.638953 | 7_3:+47295295 | None:intergenic |
| TAGCCACACAAAGCCTCTGG+TGG | 0.644119 | 7_3:+47295198 | None:intergenic |
| ACACCGTAACGAGGTTGTCG+GGG | 0.648576 | 7_3:+47294972 | None:intergenic |
| ATTTCGACAACACCGTAACG+AGG | 0.653291 | 7_3:+47294963 | None:intergenic |
| ACACCACCAGAGGCTTTGTG+TGG | 0.653963 | 7_3:-47295201 | Msa1106750:CDS |
| TTTCCCAAACATTTAAAACG+TGG | 0.662282 | 7_3:-47293669 | Msa1106750:CDS |
| GCCATTACAACGAACTCTGG+TGG | 0.669951 | 7_3:-47295231 | Msa1106750:CDS |
| AAGTGATGTAATGTAACCAA+TGG | 0.674888 | 7_3:+47293895 | None:intergenic |
| TGACAAGGTTGATTATAAGG+TGG | 0.676439 | 7_3:-47293485 | Msa1106750:CDS |
| TGGCGTCAAAACACCACCAG+AGG | 0.678981 | 7_3:-47295211 | Msa1106750:CDS |
| TTTGTTGTAAATTTCTAACG+AGG | 0.679187 | 7_3:+47292573 | None:intergenic |
| GATTGTTGGATAGTCCGACC+CGG | 0.683447 | 7_3:+47293793 | None:intergenic |
| TATAAGCTACCCTTTAGCGG+CGG | 0.683869 | 7_3:-47294840 | Msa1106750:CDS |
| TGGTCAATATCAATATCATG+GGG | 0.701871 | 7_3:-47293745 | Msa1106750:CDS |
| TCGGGTATTAAAAGTAAATG+GGG | 0.708683 | 7_3:+47293630 | None:intergenic |
| TCGGCAGAGACTTTATATGG+TGG | 0.715015 | 7_3:+47295133 | None:intergenic |
| TTAATGCAGGTAGATATACG+TGG | 0.808611 | 7_3:-47293955 | Msa1106750:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTTTACACATTAT+TGG | - | chr7_3:47293537-47293556 | Msa1106750:CDS | 10.0% |
| !! | AATAAATACGTAATAATTAA+TGG | + | chr7_3:47293644-47293663 | None:intergenic | 10.0% |
| !!! | AAATACTTTTTTTTGAATAA+AGG | + | chr7_3:47293770-47293789 | None:intergenic | 10.0% |
| !!! | TTTATTTGATTTTCTTTTTT+TGG | + | chr7_3:47293950-47293969 | None:intergenic | 10.0% |
| !! | AATAAATAAATTAGCTAAAA+TGG | + | chr7_3:47294174-47294193 | None:intergenic | 10.0% |
| !! | ATTAACATAATAATTATATG+TGG | - | chr7_3:47294802-47294821 | Msa1106750:CDS | 10.0% |
| !! | TTAACATAATAATTATATGT+GGG | - | chr7_3:47294803-47294822 | Msa1106750:CDS | 10.0% |
| !!! | AGTTTTTAATTTAATTAATG+CGG | - | chr7_3:47295038-47295057 | Msa1106750:CDS | 10.0% |
| !!! | TTCTTTATTTTTATTACTAA+TGG | + | chr7_3:47295169-47295188 | None:intergenic | 10.0% |
| !!! | GAGTAAATTTTTTTTTTGAA+GGG | + | chr7_3:47293797-47293816 | None:intergenic | 15.0% |
| !!! | AGAGTAAATTTTTTTTTTGA+AGG | + | chr7_3:47293798-47293817 | None:intergenic | 15.0% |
| !! | AAAATATATCATACCAATAA+AGG | + | chr7_3:47293986-47294005 | None:intergenic | 15.0% |
| !!! | ATATTTTTTGGAATGTAAAA+TGG | + | chr7_3:47294150-47294169 | None:intergenic | 15.0% |
| !!! | ATTTATTTATTGATTAATGC+AGG | - | chr7_3:47294187-47294206 | Msa1106750:intron | 15.0% |
| !! | TAAAGAAAAAAGAACAAATT+GGG | + | chr7_3:47294774-47294793 | None:intergenic | 15.0% |
| !! | ATAAAGAAAAAAGAACAAAT+TGG | + | chr7_3:47294775-47294794 | None:intergenic | 15.0% |
| !!! | TAATTTTTGGAAAATGATAA+AGG | + | chr7_3:47295421-47295440 | None:intergenic | 15.0% |
| !! | CATAATCAAATGTACTATAT+TGG | - | chr7_3:47293220-47293239 | Msa1106750:intron | 20.0% |
| !!! | TTTTTCTCTTGAATATTCAT+TGG | - | chr7_3:47293498-47293517 | Msa1106750:CDS | 20.0% |
| !!! | ACATCATGAATCAAATTTTT+CGG | - | chr7_3:47293568-47293587 | Msa1106750:CDS | 20.0% |
| !!! | TGGTTTTTTTTTTTTTGACA+AGG | - | chr7_3:47293852-47293871 | Msa1106750:CDS | 20.0% |
| !!! | AGCTAAAATGGAATATTTTT+TGG | + | chr7_3:47294162-47294181 | None:intergenic | 20.0% |
| !!! | ATCATCATATCTTTTATAAC+CGG | + | chr7_3:47294633-47294652 | None:intergenic | 20.0% |
| !!! | TAGTTGCTAATATTTCATTT+TGG | - | chr7_3:47294971-47294990 | Msa1106750:CDS | 20.0% |
| !!! | TTTAATTTAATTAATGCGGA+TGG | - | chr7_3:47295042-47295061 | Msa1106750:CDS | 20.0% |
| !!! | TACACTAATTTTCTCAAATT+AGG | + | chr7_3:47295102-47295121 | None:intergenic | 20.0% |
| !!! | CTTTTCTGATTTATCATTAA+AGG | + | chr7_3:47295297-47295316 | None:intergenic | 20.0% |
| !! | CTTTAATGATAAATCAGAAA+AGG | - | chr7_3:47295295-47295314 | Msa1106750:CDS | 20.0% |
| !!! | AAAAGGTAACTTTTGATTTA+TGG | - | chr7_3:47295312-47295331 | Msa1106750:CDS | 20.0% |
| !! | AGATTGAAATTTGGATTAAT+AGG | - | chr7_3:47295455-47295474 | Msa1106750:CDS | 20.0% |
| ! | ATGAGAAAGGTAGAAAAAAT+GGG | + | chr7_3:47292735-47292754 | None:intergenic | 25.0% |
| ! | TATGAGAAAGGTAGAAAAAA+TGG | + | chr7_3:47292736-47292755 | None:intergenic | 25.0% |
| !! | ATTGATGATAAGTATGAGAA+AGG | + | chr7_3:47292748-47292767 | None:intergenic | 25.0% |
| ! | TTTAAATACACATGTTGGTA+TGG | - | chr7_3:47293055-47293074 | Msa1106750:intron | 25.0% |
| !!! | TGAAAGAGAGTTTTGAATTA+GGG | - | chr7_3:47293110-47293129 | Msa1106750:intron | 25.0% |
| ! | AATCAAATGTACTATATTGG+AGG | - | chr7_3:47293223-47293242 | Msa1106750:intron | 25.0% |
| ! | ATCGATTGAATTCTCTATAA+AGG | - | chr7_3:47293604-47293623 | Msa1106750:CDS | 25.0% |
| ! | TCGATTGAATTCTCTATAAA+GGG | - | chr7_3:47293605-47293624 | Msa1106750:CDS | 25.0% |
| ! | AAGGATAGTAAATACTTGAA+CGG | + | chr7_3:47293751-47293770 | None:intergenic | 25.0% |
| ! | ATCGTCGAAAACTAAAAATA+AGG | + | chr7_3:47293824-47293843 | None:intergenic | 25.0% |
| !! | TTTGACAAGGATATCTTTTA+TGG | - | chr7_3:47293865-47293884 | Msa1106750:CDS | 25.0% |
| ! | TTAAAGAACAGTTCCTTTAT+TGG | - | chr7_3:47293970-47293989 | Msa1106750:intron | 25.0% |
| !! | TCTAACTACCATTTTAGATT+CGG | - | chr7_3:47294034-47294053 | Msa1106750:intron | 25.0% |
| !!! | TATTTTGACCGAATCTAAAA+TGG | + | chr7_3:47294045-47294064 | None:intergenic | 25.0% |
| ! | TCAAAATAAAACTACCAGTT+TGG | - | chr7_3:47294057-47294076 | Msa1106750:intron | 25.0% |
| ! | GTTAGTAACATCATACAAAT+CGG | - | chr7_3:47294337-47294356 | Msa1106750:intron | 25.0% |
| !!! | ATATTGACCAATTTTTTGAG+TGG | + | chr7_3:47294400-47294419 | None:intergenic | 25.0% |
| ! | ATTGGTCAATATCAATATCA+TGG | - | chr7_3:47294408-47294427 | Msa1106750:intron | 25.0% |
| ! | TTGGTCAATATCAATATCAT+GGG | - | chr7_3:47294409-47294428 | Msa1106750:intron | 25.0% |
| ! | GGTTATAAAAGATATGATGA+TGG | - | chr7_3:47294632-47294651 | Msa1106750:intron | 25.0% |
| !!! | TAAACGTATGGTCTTTATTT+TGG | - | chr7_3:47294891-47294910 | Msa1106750:CDS | 25.0% |
| ! | ACTAAATTATCATGTTCAAG+AGG | + | chr7_3:47294955-47294974 | None:intergenic | 25.0% |
| ! | AAATGTTAATGAGTGTTCTA+AGG | - | chr7_3:47295236-47295255 | Msa1106750:CDS | 25.0% |
| !! | GTTGTCAAACTTACTATTTT+TGG | + | chr7_3:47295275-47295294 | None:intergenic | 25.0% |
| !!! | TAACTTTTGATTTATGGTCT+AGG | - | chr7_3:47295318-47295337 | Msa1106750:CDS | 25.0% |
| !!! | AACTTTTGATTTATGGTCTA+GGG | - | chr7_3:47295319-47295338 | Msa1106750:CDS | 25.0% |
| !! | GTTAGGCACTAATTAATTTT+TGG | + | chr7_3:47295434-47295453 | None:intergenic | 25.0% |
| ! | ATCCAAATTTCAATCTAGTT+AGG | + | chr7_3:47295451-47295470 | None:intergenic | 25.0% |
| GGATGATATTGAATAGTAGT+GGG | + | chr7_3:47292777-47292796 | None:intergenic | 30.0% | |
| TGGATGATATTGAATAGTAG+TGG | + | chr7_3:47292778-47292797 | None:intergenic | 30.0% | |
| ! | GATTCTATGATTAGGGTTTT+CGG | + | chr7_3:47292824-47292843 | None:intergenic | 30.0% |
| AAAACCCTAATCATAGAATC+TGG | - | chr7_3:47292824-47292843 | Msa1106750:intron | 30.0% | |
| AAACAAAATGTGAGAGATGT+TGG | + | chr7_3:47292867-47292886 | None:intergenic | 30.0% | |
| ! | AACATCTCTCACATTTTGTT+TGG | - | chr7_3:47292866-47292885 | Msa1106750:intron | 30.0% |
| !! | TCTCACATTTTGTTTGGAAT+CGG | - | chr7_3:47292872-47292891 | Msa1106750:intron | 30.0% |
| CATCGTTTAAATACACATGT+TGG | - | chr7_3:47293050-47293069 | Msa1106750:intron | 30.0% | |
| !!! | GTGAAAGAGAGTTTTGAATT+AGG | - | chr7_3:47293109-47293128 | Msa1106750:intron | 30.0% |
| AATTAGGGTTAGATAATGTG+AGG | - | chr7_3:47293125-47293144 | Msa1106750:intron | 30.0% | |
| ! | TGTTGTACATTTTTACACCA+TGG | - | chr7_3:47293270-47293289 | Msa1106750:intron | 30.0% |
| GATCGTTATTCTGAGTATTA+TGG | - | chr7_3:47293367-47293386 | Msa1106750:intron | 30.0% | |
| CAAAGTTGCATTAGTGAAAT+TGG | - | chr7_3:47293406-47293425 | Msa1106750:intron | 30.0% | |
| ! | GTTTTCGACGATATCTTTTA+TGG | - | chr7_3:47293832-47293851 | Msa1106750:CDS | 30.0% |
| TTAGATCAAGTAATCCAAAC+TGG | + | chr7_3:47294074-47294093 | None:intergenic | 30.0% | |
| AAGTGATGTAATGTAACCAA+TGG | + | chr7_3:47294263-47294282 | None:intergenic | 30.0% | |
| ATTACATCACTTAGACTATG+TGG | - | chr7_3:47294271-47294290 | Msa1106750:intron | 30.0% | |
| TGGTCAATATCAATATCATG+GGG | - | chr7_3:47294410-47294429 | Msa1106750:intron | 30.0% | |
| TCTTTAGCTGTTGCTAAATA+GGG | + | chr7_3:47294455-47294474 | None:intergenic | 30.0% | |
| ! | TTTCCCAAACATTTAAAACG+TGG | - | chr7_3:47294486-47294505 | Msa1106750:intron | 30.0% |
| !! | CTTCCACGTTTTAAATGTTT+GGG | + | chr7_3:47294492-47294511 | None:intergenic | 30.0% |
| !! | TCTTCCACGTTTTAAATGTT+TGG | + | chr7_3:47294493-47294512 | None:intergenic | 30.0% |
| TCGGGTATTAAAAGTAAATG+GGG | + | chr7_3:47294528-47294547 | None:intergenic | 30.0% | |
| GTCGGGTATTAAAAGTAAAT+GGG | + | chr7_3:47294529-47294548 | None:intergenic | 30.0% | |
| ! | TATTTTATGGATCGGATTGA+GGG | - | chr7_3:47294584-47294603 | Msa1106750:intron | 30.0% |
| !! | AAAAGATATGATGATGGTTC+AGG | - | chr7_3:47294638-47294657 | Msa1106750:intron | 30.0% |
| !! | AAAGATATGATGATGGTTCA+GGG | - | chr7_3:47294639-47294658 | Msa1106750:intron | 30.0% |
| GATTCAAACTCTATCATTTG+AGG | - | chr7_3:47294825-47294844 | Msa1106750:CDS | 30.0% | |
| ! | AAAATGTTGATAAGTGTCCT+CGG | - | chr7_3:47295187-47295206 | Msa1106750:CDS | 30.0% |
| TGCCTAACTAGATTGAAATT+TGG | - | chr7_3:47295446-47295465 | Msa1106750:CDS | 30.0% | |
| GAGATAATCAACAATGTAGA+TGG | - | chr7_3:47295498-47295517 | Msa1106750:CDS | 30.0% | |
| ! | TTTTCCATGGTTTGATGAGA+AGG | + | chr7_3:47292625-47292644 | None:intergenic | 35.0% |
| ! | AGATCATTGGATTTGATGGT+GGG | + | chr7_3:47292659-47292678 | None:intergenic | 35.0% |
| GAAGAGATCATTGGATTTGA+TGG | + | chr7_3:47292663-47292682 | None:intergenic | 35.0% | |
| TTCGCCAGATTCTATGATTA+GGG | + | chr7_3:47292831-47292850 | None:intergenic | 35.0% | |
| AAAATGTGAGAGATGTTGGT+CGG | + | chr7_3:47292863-47292882 | None:intergenic | 35.0% | |
| GTATTTAAACGATGACGTGT+CGG | + | chr7_3:47293044-47293063 | None:intergenic | 35.0% | |
| ! | TAATGTGAGGTGGTTTGTAA+TGG | - | chr7_3:47293138-47293157 | Msa1106750:intron | 35.0% |
| ! | AATGTGAGGTGGTTTGTAAT+GGG | - | chr7_3:47293139-47293158 | Msa1106750:intron | 35.0% |
| ! | CATTTTTACACCATGGCTTA+TGG | - | chr7_3:47293277-47293296 | Msa1106750:intron | 35.0% |
| AAATGTACCTGATGAAAACC+AGG | + | chr7_3:47293451-47293470 | None:intergenic | 35.0% | |
| TTAATGCAGGTAGATATACG+TGG | - | chr7_3:47294200-47294219 | Msa1106750:intron | 35.0% | |
| AACATCATACAAATCGGATC+CGG | - | chr7_3:47294343-47294362 | Msa1106750:intron | 35.0% | |
| GGTCATAGCAAAATGATTGT+TGG | + | chr7_3:47294379-47294398 | None:intergenic | 35.0% | |
| GCTATGACCACTCAAAAAAT+TGG | - | chr7_3:47294390-47294409 | Msa1106750:intron | 35.0% | |
| CTCTTTAGCTGTTGCTAAAT+AGG | + | chr7_3:47294456-47294475 | None:intergenic | 35.0% | |
| AACAGCTAAAGAGCTTGAAA+TGG | - | chr7_3:47294463-47294482 | Msa1106750:intron | 35.0% | |
| ! | CATTTAAAACGTGGAAGACT+TGG | - | chr7_3:47294495-47294514 | Msa1106750:intron | 35.0% |
| GGTCGGGTATTAAAAGTAAA+TGG | + | chr7_3:47294530-47294549 | None:intergenic | 35.0% | |
| ! | GAAACCGGTTGTGTATTTTA+TGG | - | chr7_3:47294571-47294590 | Msa1106750:intron | 35.0% |
| CGATCCATAAAATACACAAC+CGG | + | chr7_3:47294578-47294597 | None:intergenic | 35.0% | |
| ! | CGGTTGTGTATTTTATGGAT+CGG | - | chr7_3:47294576-47294595 | Msa1106750:intron | 35.0% |
| ! | GTATTTTATGGATCGGATTG+AGG | - | chr7_3:47294583-47294602 | Msa1106750:intron | 35.0% |
| ! | ATATCTTTTATAACCGGACC+GGG | + | chr7_3:47294627-47294646 | None:intergenic | 35.0% |
| ! | CATATCTTTTATAACCGGAC+CGG | + | chr7_3:47294628-47294647 | None:intergenic | 35.0% |
| ! | GTGTGACAAGGTTGATTATA+AGG | - | chr7_3:47294667-47294686 | Msa1106750:intron | 35.0% |
| ! | TGACAAGGTTGATTATAAGG+TGG | - | chr7_3:47294670-47294689 | Msa1106750:intron | 35.0% |
| ! | CAATAATGAGGCAAAAGCAT+AGG | + | chr7_3:47294728-47294747 | None:intergenic | 35.0% |
| ! | CTATGCTTTTGCCTCATTAT+TGG | - | chr7_3:47294726-47294745 | Msa1106750:CDS | 35.0% |
| TTTGCCTCATTATTGGAAAG+AGG | - | chr7_3:47294733-47294752 | Msa1106750:CDS | 35.0% | |
| CATACCTCTTTCCAATAATG+AGG | + | chr7_3:47294740-47294759 | None:intergenic | 35.0% | |
| TGTGTTTAGTGTCAGTTAAG+CGG | + | chr7_3:47294870-47294889 | None:intergenic | 35.0% | |
| CACTAAACACACTAAACGTA+TGG | - | chr7_3:47294879-47294898 | Msa1106750:CDS | 35.0% | |
| ! | TTGGTTATCAAGTTGTTGCT+TGG | - | chr7_3:47294990-47295009 | Msa1106750:CDS | 35.0% |
| ! | TGGTTATCAAGTTGTTGCTT+GGG | - | chr7_3:47294991-47295010 | Msa1106750:CDS | 35.0% |
| GTGATCAATGTCAAAATCAG+AGG | - | chr7_3:47295534-47295553 | Msa1106750:CDS | 35.0% | |
| !! | GATCATTGGATTTGATGGTG+GGG | + | chr7_3:47292658-47292677 | None:intergenic | 40.0% |
| GAGATCATTGGATTTGATGG+TGG | + | chr7_3:47292660-47292679 | None:intergenic | 40.0% | |
| GAAGAGAGAGAAGAGATCAT+TGG | + | chr7_3:47292672-47292691 | None:intergenic | 40.0% | |
| TTCTCTCTCTTCCTCAAAGT+GGG | - | chr7_3:47292680-47292699 | Msa1106750:CDS | 40.0% | |
| AAATTGCTAGACCCACTTTG+AGG | + | chr7_3:47292694-47292713 | None:intergenic | 40.0% | |
| ATGGGAGATGAGAAAGATTG+TGG | + | chr7_3:47292717-47292736 | None:intergenic | 40.0% | |
| CTTCGCCAGATTCTATGATT+AGG | + | chr7_3:47292832-47292851 | None:intergenic | 40.0% | |
| !! | CACATTTTGTTTGGAATCGG+CGG | - | chr7_3:47292875-47292894 | Msa1106750:intron | 40.0% |
| TAGGGTTAGATAATGTGAGG+TGG | - | chr7_3:47293128-47293147 | Msa1106750:intron | 40.0% | |
| ! | TTTTACACCATGGCTTATGG+CGG | - | chr7_3:47293280-47293299 | Msa1106750:intron | 40.0% |
| TGCTATAAGCTACCCTTTAG+CGG | - | chr7_3:47293312-47293331 | Msa1106750:intron | 40.0% | |
| ! | GAGCTTGTGAAGATTTTGGA+CGG | - | chr7_3:47293337-47293356 | Msa1106750:intron | 40.0% |
| GTTCAGATTACCAAAGAACC+TGG | - | chr7_3:47293430-47293449 | Msa1106750:CDS | 40.0% | |
| CTGATGAAAACCAGGTTCTT+TGG | + | chr7_3:47293443-47293462 | None:intergenic | 40.0% | |
| !! | CAAAGAACCTGGTTTTCATC+AGG | - | chr7_3:47293441-47293460 | Msa1106750:CDS | 40.0% |
| GATATACGTGGTAACCCATA+TGG | - | chr7_3:47294212-47294231 | Msa1106750:intron | 40.0% | |
| AATGTAACCAATGGTGCAAC+TGG | + | chr7_3:47294254-47294273 | None:intergenic | 40.0% | |
| ! | GGAACCAATTTTCCCAAACA+TGG | - | chr7_3:47294292-47294311 | Msa1106750:intron | 40.0% |
| CGTTCCATGTTTGGGAAAAT+TGG | + | chr7_3:47294299-47294318 | None:intergenic | 40.0% | |
| CATCAACACGTTCCATGTTT+GGG | + | chr7_3:47294307-47294326 | None:intergenic | 40.0% | |
| ACATCATACAAATCGGATCC+GGG | - | chr7_3:47294344-47294363 | Msa1106750:intron | 40.0% | |
| !! | ATATGATGATGGTTCAGGGA+AGG | - | chr7_3:47294643-47294662 | Msa1106750:intron | 40.0% |
| GTTGATTATAAGGTGGCTCA+TGG | - | chr7_3:47294677-47294696 | Msa1106750:intron | 40.0% | |
| !! | ATGTTCAAGAGGTGTCACTT+GGG | + | chr7_3:47294944-47294963 | None:intergenic | 40.0% |
| ! | TTATCAAGTTGTTGCTTGGG+TGG | - | chr7_3:47294994-47295013 | Msa1106750:CDS | 40.0% |
| GAGAAGTCAAAACACTGTCT+AGG | + | chr7_3:47295362-47295381 | None:intergenic | 40.0% | |
| GAGACCTTCTCATCAAACCA+TGG | - | chr7_3:47292618-47292637 | Msa1106750:CDS | 45.0% | |
| !! | TTGGATTTGATGGTGGGGAA+GGG | + | chr7_3:47292653-47292672 | None:intergenic | 45.0% |
| !! | ATTGGATTTGATGGTGGGGA+AGG | + | chr7_3:47292654-47292673 | None:intergenic | 45.0% |
| CTTCTCTCTCTTCCTCAAAG+TGG | - | chr7_3:47292679-47292698 | Msa1106750:CDS | 45.0% | |
| ! | GCGGGTTTGGAACATTTGTT+TGG | + | chr7_3:47292798-47292817 | None:intergenic | 45.0% |
| ! | TGATTAGGGTTTTCGGAGTG+CGG | + | chr7_3:47292817-47292836 | None:intergenic | 45.0% |
| ! | TTATATGGTGGCGAAGTCTC+TGG | + | chr7_3:47293013-47293032 | None:intergenic | 45.0% |
| TCGGCAGAGACTTTATATGG+TGG | + | chr7_3:47293025-47293044 | None:intergenic | 45.0% | |
| ! | GTGTCGGCAGAGACTTTATA+TGG | + | chr7_3:47293028-47293047 | None:intergenic | 45.0% |
| ATTTCGACAACACCGTAACG+AGG | + | chr7_3:47293195-47293214 | None:intergenic | 45.0% | |
| TATAAGCTACCCTTTAGCGG+CGG | - | chr7_3:47293315-47293334 | Msa1106750:intron | 45.0% | |
| ! | GTGCTGCTAGTAAGCCATAT+GGG | + | chr7_3:47294229-47294248 | None:intergenic | 45.0% |
| ! | TGTGCTGCTAGTAAGCCATA+TGG | + | chr7_3:47294230-47294249 | None:intergenic | 45.0% |
| GCATCAACACGTTCCATGTT+TGG | + | chr7_3:47294308-47294327 | None:intergenic | 45.0% | |
| ACACACGGATCTTGACTAAC+GGG | + | chr7_3:47294551-47294570 | None:intergenic | 45.0% | |
| CACACACGGATCTTGACTAA+CGG | + | chr7_3:47294552-47294571 | None:intergenic | 45.0% | |
| TCAAGATCCGTGTGTGAAAC+CGG | - | chr7_3:47294556-47294575 | Msa1106750:intron | 45.0% | |
| ! | TACACAACCGGTTTCACACA+CGG | + | chr7_3:47294566-47294585 | None:intergenic | 45.0% |
| ! | ATGGATCGGATTGAGGGTTT+TGG | - | chr7_3:47294590-47294609 | Msa1106750:intron | 45.0% |
| !! | ATCGGATTGAGGGTTTTGGT+CGG | - | chr7_3:47294594-47294613 | Msa1106750:intron | 45.0% |
| !! | CATGTTCAAGAGGTGTCACT+TGG | + | chr7_3:47294945-47294964 | None:intergenic | 45.0% |
| ! | ATGTTGATAAGTGTCCTCGG+TGG | - | chr7_3:47295190-47295209 | Msa1106750:CDS | 45.0% |
| AAACAATGTTCAAGCCACCG+AGG | + | chr7_3:47295207-47295226 | None:intergenic | 45.0% | |
| ATCTCGCAGCATTGTCTTCT+TGG | + | chr7_3:47295483-47295502 | None:intergenic | 45.0% | |
| !!! | AAAACTTAATTTTAAATTAT+AGG | + | chr7_3:47295024-47295043 | None:intergenic | 5.0% |
| ! | GGGAAGGGAAACGTTTTCCA+TGG | + | chr7_3:47292638-47292657 | None:intergenic | 50.0% |
| ! | GATTAGGGTTTTCGGAGTGC+GGG | + | chr7_3:47292816-47292835 | None:intergenic | 50.0% |
| ! | AGAGATGTTGGTCGGCTCTT+CGG | + | chr7_3:47292855-47292874 | None:intergenic | 50.0% |
| GTCGCCATTACAACGAACTC+TGG | - | chr7_3:47292921-47292940 | Msa1106750:intron | 50.0% | |
| GCCATTACAACGAACTCTGG+TGG | - | chr7_3:47292924-47292943 | Msa1106750:intron | 50.0% | |
| GCCACCAGAGTTCGTTGTAA+TGG | + | chr7_3:47292928-47292947 | None:intergenic | 50.0% | |
| AGCCGTCTAAAAACGAGACG+TGG | - | chr7_3:47292987-47293006 | Msa1106750:intron | 50.0% | |
| !! | GGCCACGTCTCGTTTTTAGA+CGG | + | chr7_3:47292992-47293011 | None:intergenic | 50.0% |
| AACACCGTAACGAGGTTGTC+GGG | + | chr7_3:47293187-47293206 | None:intergenic | 50.0% | |
| CAACACCGTAACGAGGTTGT+CGG | + | chr7_3:47293188-47293207 | None:intergenic | 50.0% | |
| ! | GGCGGAGCTTGTGAAGATTT+TGG | - | chr7_3:47293333-47293352 | Msa1106750:intron | 50.0% |
| AGCACATCCAGTTGCACCAT+TGG | - | chr7_3:47294244-47294263 | Msa1106750:intron | 50.0% | |
| CATACAAATCGGATCCGGGT+CGG | - | chr7_3:47294348-47294367 | Msa1106750:intron | 50.0% | |
| GATTGTTGGATAGTCCGACC+CGG | + | chr7_3:47294365-47294384 | None:intergenic | 50.0% | |
| ! | ACGGATCTTGACTAACGGGT+CGG | + | chr7_3:47294547-47294566 | None:intergenic | 50.0% |
| !! | TCGGATTGAGGGTTTTGGTC+GGG | - | chr7_3:47294595-47294614 | Msa1106750:intron | 50.0% |
| ! | TTCAGGGAAGGAGTGTGACA+AGG | - | chr7_3:47294655-47294674 | Msa1106750:intron | 50.0% |
| !! | TTCAAGAGGTGTCACTTGGG+TGG | + | chr7_3:47294941-47294960 | None:intergenic | 50.0% |
| TGGCGTCAAAACACCACCAG+AGG | - | chr7_3:47292944-47292963 | Msa1106750:intron | 55.0% | |
| ! | ACACCACCAGAGGCTTTGTG+TGG | - | chr7_3:47292954-47292973 | Msa1106750:intron | 55.0% |
| TAGCCACACAAAGCCTCTGG+TGG | + | chr7_3:47292960-47292979 | None:intergenic | 55.0% | |
| GTCTAGCCACACAAAGCCTC+TGG | + | chr7_3:47292963-47292982 | None:intergenic | 55.0% | |
| GAGGTTGTCGGGGAAGAAGA+CGG | + | chr7_3:47293176-47293195 | None:intergenic | 55.0% | |
| CTTCCCCGACAACCTCGTTA+CGG | - | chr7_3:47293180-47293199 | Msa1106750:intron | 55.0% | |
| ACACCGTAACGAGGTTGTCG+GGG | + | chr7_3:47293186-47293205 | None:intergenic | 55.0% | |
| TACACCATGGCTTATGGCGG+CGG | - | chr7_3:47293283-47293302 | Msa1106750:intron | 55.0% | |
| TCACAAGCTCCGCCGCTAAA+GGG | + | chr7_3:47293327-47293346 | None:intergenic | 55.0% | |
| TTCACAAGCTCCGCCGCTAA+AGG | + | chr7_3:47293328-47293347 | None:intergenic | 55.0% | |
| ! | CGGATCTTGACTAACGGGTC+GGG | + | chr7_3:47294546-47294565 | None:intergenic | 55.0% |
| !! | CGGATTGAGGGTTTTGGTCG+GGG | - | chr7_3:47294596-47294615 | Msa1106750:intron | 55.0% |
| !! | GTTTTGGTCGGGGATTGACC+CGG | - | chr7_3:47294606-47294625 | Msa1106750:intron | 55.0% |
| ! | GGGTTTTCGGAGTGCGGGTT+TGG | + | chr7_3:47292811-47292830 | None:intergenic | 60.0% |
| TCGGCGGCTCTTCAGCTACA+TGG | - | chr7_3:47292891-47292910 | Msa1106750:intron | 60.0% | |
| ACCATGGCTTATGGCGGCGG+AGG | - | chr7_3:47293286-47293305 | Msa1106750:intron | 65.0% | |
| CCATGGCTTATGGCGGCGGA+GGG | - | chr7_3:47293287-47293306 | Msa1106750:intron | 65.0% | |
| CCCTCCGCCGCCATAAGCCA+TGG | + | chr7_3:47293290-47293309 | None:intergenic | 70.0% | |
| GGTCGGGGATTGACCCGGTC+CGG | - | chr7_3:47294611-47294630 | Msa1106750:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 47292587 | 47295590 | 47292587 | ID=Msa1106750;Name=Msa1106750 |
| chr7_3 | mRNA | 47292587 | 47295590 | 47292587 | ID=Msa1106750-mRNA-1;Parent=Msa1106750;Name=Msa1106750-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|3|0|511 |
| chr7_3 | exon | 47294715 | 47295590 | 47294715 | ID=Msa1106750-mRNA-1:exon:9661;Parent=Msa1106750-mRNA-1 |
| chr7_3 | exon | 47293423 | 47293968 | 47293423 | ID=Msa1106750-mRNA-1:exon:9660;Parent=Msa1106750-mRNA-1 |
| chr7_3 | exon | 47292587 | 47292700 | 47292587 | ID=Msa1106750-mRNA-1:exon:9659;Parent=Msa1106750-mRNA-1 |
| chr7_3 | CDS | 47294715 | 47295590 | 47294715 | ID=Msa1106750-mRNA-1:cds;Parent=Msa1106750-mRNA-1 |
| chr7_3 | CDS | 47293423 | 47293968 | 47293423 | ID=Msa1106750-mRNA-1:cds;Parent=Msa1106750-mRNA-1 |
| chr7_3 | CDS | 47292587 | 47292700 | 47292587 | ID=Msa1106750-mRNA-1:cds;Parent=Msa1106750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
