Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0024280 | sp|P0DI40|CASP1_VIGUN | 79.082 | 196 | 37 | 2 | 1 | 196 | 1 | 192 | 1.19e-92 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004580 | Msa0024280 | 0.827420 | 1.579992e-54 | -8.615850e-47 |
| Msa0010150 | Msa0024280 | 0.824867 | 6.395184e-54 | -8.615850e-47 |
| Msa0024280 | Msa0024290 | 0.830464 | 2.893411e-55 | -8.615850e-47 |
| Msa0024280 | Msa0048950 | 0.840243 | 9.778279e-58 | -8.615850e-47 |
| Msa0024280 | Msa0057870 | 0.813023 | 3.157616e-51 | -8.615850e-47 |
| Msa0024280 | Msa0059880 | 0.879874 | 8.723132e-70 | -8.615850e-47 |
| Msa0024280 | Msa0060380 | 0.806769 | 7.003054e-50 | -8.615850e-47 |
| Msa0024280 | Msa0069480 | 0.804933 | 1.702800e-49 | -8.615850e-47 |
| Msa0024280 | Msa0072030 | 0.860332 | 2.224532e-63 | -8.615850e-47 |
| Msa0024280 | Msa0073270 | 0.801607 | 8.312538e-49 | -8.615850e-47 |
| Msa0024280 | Msa0073280 | 0.808362 | 3.215065e-50 | -8.615850e-47 |
| Msa0024280 | Msa0074620 | 0.802799 | 4.726217e-49 | -8.615850e-47 |
| Msa0024280 | Msa0102930 | 0.821778 | 3.369207e-53 | -8.615850e-47 |
| Msa0024280 | Msa0108350 | 0.800603 | 1.333863e-48 | -8.615850e-47 |
| Msa0024280 | Msa0120050 | 0.902251 | 1.173689e-78 | -8.615850e-47 |
| Msa0024280 | Msa0120070 | 0.827396 | 1.601404e-54 | -8.615850e-47 |
| Msa0024280 | Msa0131460 | 0.812125 | 4.962302e-51 | -8.615850e-47 |
| Msa0024280 | Msa0140270 | 0.823944 | 1.054331e-53 | -8.615850e-47 |
| Msa0024280 | Msa0143680 | 0.813416 | 2.588211e-51 | -8.615850e-47 |
| Msa0024280 | Msa0143710 | 0.813746 | 2.189650e-51 | -8.615850e-47 |
| Msa0024280 | Msa0143940 | 0.809960 | 1.461379e-50 | -8.615850e-47 |
| Msa0024280 | Msa0144010 | 0.820373 | 7.099913e-53 | -8.615850e-47 |
| Msa0024280 | Msa0147670 | 0.842825 | 2.041450e-58 | -8.615850e-47 |
| Msa0024280 | Msa0150910 | 0.878049 | 3.843564e-69 | -8.615850e-47 |
| Msa0024280 | Msa0163340 | 0.968574 | 7.167617e-129 | -8.615850e-47 |
| Msa0024280 | Msa0163370 | 0.851823 | 6.904235e-61 | -8.615850e-47 |
| Msa0024280 | Msa0177260 | 0.810619 | 1.053653e-50 | -8.615850e-47 |
| Msa0024280 | Msa0190670 | 0.812725 | 3.668772e-51 | -8.615850e-47 |
| Msa0024280 | Msa0212550 | 0.802225 | 6.205302e-49 | -8.615850e-47 |
| Msa0024280 | Msa0219210 | 0.826567 | 2.527872e-54 | -8.615850e-47 |
| Msa0024280 | Msa0223880 | 0.810955 | 8.909214e-51 | -8.615850e-47 |
| Msa0024280 | Msa0252930 | 0.805233 | 1.473730e-49 | -8.615850e-47 |
| Msa0024280 | Msa0265060 | 0.809036 | 2.307206e-50 | -8.615850e-47 |
| Msa0024280 | Msa0269720 | 0.813898 | 2.027697e-51 | -8.615850e-47 |
| Msa0024280 | Msa0274260 | 0.804873 | 1.752406e-49 | -8.615850e-47 |
| Msa0024280 | Msa0278480 | 0.804572 | 2.025324e-49 | -8.615850e-47 |
| Msa0024280 | Msa0278940 | 0.814792 | 1.285954e-51 | -8.615850e-47 |
| Msa0024280 | Msa0298270 | 0.824885 | 6.333008e-54 | -8.615850e-47 |
| Msa0024280 | Msa0336070 | 0.813025 | 3.153672e-51 | -8.615850e-47 |
| Msa0024280 | Msa0336630 | 0.808200 | 3.480529e-50 | -8.615850e-47 |
| Msa0024280 | Msa0340650 | 0.813808 | 2.122340e-51 | -8.615850e-47 |
| Msa0024280 | Msa0343720 | 0.818386 | 2.013933e-52 | -8.615850e-47 |
| Msa0024280 | Msa0349910 | 0.810870 | 9.298177e-51 | -8.615850e-47 |
| Msa0024280 | Msa0366510 | 0.805913 | 1.060830e-49 | -8.615850e-47 |
| Msa0024280 | Msa0374130 | 0.816052 | 6.745388e-52 | -8.615850e-47 |
| Msa0024280 | Msa0380680 | 0.827943 | 1.183196e-54 | -8.615850e-47 |
| Msa0024280 | Msa0414480 | 0.831847 | 1.323455e-55 | -8.615850e-47 |
| Msa0024280 | Msa0430460 | 0.802747 | 4.845424e-49 | -8.615850e-47 |
| Msa0024280 | Msa0439000 | 0.803798 | 2.934796e-49 | -8.615850e-47 |
| Msa0024280 | Msa0439360 | 0.811949 | 5.420221e-51 | -8.615850e-47 |
| Msa0024280 | Msa0444200 | 0.804029 | 2.627480e-49 | -8.615850e-47 |
| Msa0024280 | Msa0464310 | 0.802920 | 4.461668e-49 | -8.615850e-47 |
| Msa0024280 | Msa0469550 | 0.812655 | 3.800529e-51 | -8.615850e-47 |
| Msa0024280 | Msa0482790 | 0.805537 | 1.272803e-49 | -8.615850e-47 |
| Msa0024280 | Msa0491760 | 0.810085 | 1.373385e-50 | -8.615850e-47 |
| Msa0024280 | Msa0491770 | 0.848017 | 8.011768e-60 | -8.615850e-47 |
| Msa0024280 | Msa0515260 | 0.812649 | 3.812128e-51 | -8.615850e-47 |
| Msa0024280 | Msa0535570 | 0.844494 | 7.302180e-59 | -8.615850e-47 |
| Msa0024280 | Msa0543740 | 0.848622 | 5.449087e-60 | -8.615850e-47 |
| Msa0024280 | Msa0548970 | 0.816897 | 4.363267e-52 | -8.615850e-47 |
| Msa0024280 | Msa0549170 | 0.800886 | 1.167699e-48 | -8.615850e-47 |
| Msa0024280 | Msa0549920 | 0.828704 | 7.751666e-55 | -8.615850e-47 |
| Msa0024280 | Msa0554660 | 0.818489 | 1.908345e-52 | -8.615850e-47 |
| Msa0024280 | Msa0579530 | 0.853331 | 2.565180e-61 | -8.615850e-47 |
| Msa0024280 | Msa0587920 | 0.806925 | 6.491555e-50 | -8.615850e-47 |
| Msa0024280 | Msa0591490 | 0.838986 | 2.075711e-57 | -8.615850e-47 |
| Msa0024280 | Msa0599600 | 0.851894 | 6.590443e-61 | -8.615850e-47 |
| Msa0024280 | Msa0602050 | 0.812454 | 4.206240e-51 | -8.615850e-47 |
| Msa0024280 | Msa0603950 | 0.826123 | 3.224579e-54 | -8.615850e-47 |
| Msa0024280 | Msa0604200 | 0.801668 | 8.075844e-49 | -8.615850e-47 |
| Msa0024280 | Msa0605400 | 0.800398 | 1.468219e-48 | -8.615850e-47 |
| Msa0024280 | Msa0605470 | 0.861272 | 1.153050e-63 | -8.615850e-47 |
| Msa0024280 | Msa0623980 | 0.808919 | 2.444964e-50 | -8.615850e-47 |
| Msa0024280 | Msa0631700 | 0.826190 | 3.108012e-54 | -8.615850e-47 |
| Msa0024280 | Msa0640290 | 0.833412 | 5.412089e-56 | -8.615850e-47 |
| Msa0024280 | Msa0643840 | 0.862228 | 5.877765e-64 | -8.615850e-47 |
| Msa0024280 | Msa0670360 | 0.850081 | 2.138490e-60 | -8.615850e-47 |
| Msa0024280 | Msa0678620 | 0.855453 | 6.245419e-62 | -8.615850e-47 |
| Msa0024280 | Msa0684720 | 0.821632 | 3.642467e-53 | -8.615850e-47 |
| Msa0024280 | Msa0711240 | 0.802575 | 5.256233e-49 | -8.615850e-47 |
| Msa0024280 | Msa0727480 | 0.863812 | 1.905253e-64 | -8.615850e-47 |
| Msa0024280 | Msa0735130 | 0.834189 | 3.461676e-56 | -8.615850e-47 |
| Msa0024280 | Msa0735140 | 0.810825 | 9.508086e-51 | -8.615850e-47 |
| Msa0024280 | Msa0735280 | 0.843819 | 1.108407e-58 | -8.615850e-47 |
| Msa0024280 | Msa0768670 | 0.875450 | 3.052265e-68 | -8.615850e-47 |
| Msa0024280 | Msa0768720 | 0.857449 | 1.620404e-62 | -8.615850e-47 |
| Msa0024280 | Msa0777060 | 0.812309 | 4.522606e-51 | -8.615850e-47 |
| Msa0024280 | Msa0777070 | 0.817411 | 3.344221e-52 | -8.615850e-47 |
| Msa0024280 | Msa0777250 | 0.855282 | 7.006351e-62 | -8.615850e-47 |
| Msa0024280 | Msa0791300 | 0.804994 | 1.653410e-49 | -8.615850e-47 |
| Msa0024280 | Msa0794240 | 0.807882 | 4.068603e-50 | -8.615850e-47 |
| Msa0024280 | Msa0813840 | 0.804915 | 1.717823e-49 | -8.615850e-47 |
| Msa0024280 | Msa0814160 | 0.859991 | 2.819098e-63 | -8.615850e-47 |
| Msa0024280 | Msa0814230 | 0.838930 | 2.145459e-57 | -8.615850e-47 |
| Msa0024280 | Msa0824860 | 0.805401 | 1.358805e-49 | -8.615850e-47 |
| Msa0024280 | Msa0854840 | 0.836811 | 7.517914e-57 | -8.615850e-47 |
| Msa0024280 | Msa0861730 | 0.814162 | 1.772799e-51 | -8.615850e-47 |
| Msa0024280 | Msa0863840 | 0.808606 | 2.851145e-50 | -8.615850e-47 |
| Msa0024280 | Msa0864160 | 0.802433 | 5.624704e-49 | -8.615850e-47 |
| Msa0024280 | Msa0883640 | 0.858463 | 8.095481e-63 | -8.615850e-47 |
| Msa0024280 | Msa0893840 | 0.834891 | 2.305186e-56 | -8.615850e-47 |
| Msa0024280 | Msa0895420 | 0.829556 | 4.817913e-55 | -8.615850e-47 |
| Msa0024280 | Msa0896920 | 0.850406 | 1.733432e-60 | -8.615850e-47 |
| Msa0024280 | Msa0902340 | 0.815496 | 8.972151e-52 | -8.615850e-47 |
| Msa0024280 | Msa0910830 | 0.865253 | 6.751041e-65 | -8.615850e-47 |
| Msa0024280 | Msa0913550 | 0.864958 | 8.359607e-65 | -8.615850e-47 |
| Msa0024280 | Msa0920400 | 0.808497 | 3.008651e-50 | -8.615850e-47 |
| Msa0024280 | Msa0933580 | 0.800089 | 1.697350e-48 | -8.615850e-47 |
| Msa0024280 | Msa0941120 | 0.810345 | 1.206881e-50 | -8.615850e-47 |
| Msa0024280 | Msa0951150 | 0.863619 | 2.187861e-64 | -8.615850e-47 |
| Msa0024280 | Msa0960090 | 0.859975 | 2.849854e-63 | -8.615850e-47 |
| Msa0024280 | Msa0962290 | 0.801593 | 8.369584e-49 | -8.615850e-47 |
| Msa0024280 | Msa0985700 | 0.858715 | 6.810855e-63 | -8.615850e-47 |
| Msa0024280 | Msa0987640 | 0.847539 | 1.084600e-59 | -8.615850e-47 |
| Msa0024280 | Msa0993450 | 0.836044 | 1.178328e-56 | -8.615850e-47 |
| Msa0024280 | Msa0996980 | 0.807124 | 5.892643e-50 | -8.615850e-47 |
| Msa0024280 | Msa1003110 | 0.859095 | 5.241201e-63 | -8.615850e-47 |
| Msa0024280 | Msa1006170 | 0.828377 | 9.299028e-55 | -8.615850e-47 |
| Msa0024280 | Msa1007930 | 0.800318 | 1.524719e-48 | -8.615850e-47 |
| Msa0024280 | Msa1018590 | 0.809229 | 2.097779e-50 | -8.615850e-47 |
| Msa0024280 | Msa1020540 | 0.804370 | 2.231831e-49 | -8.615850e-47 |
| Msa0024280 | Msa1021620 | 0.912905 | 1.138975e-83 | -8.615850e-47 |
| Msa0024280 | Msa1022510 | 0.804505 | 2.091458e-49 | -8.615850e-47 |
| Msa0024280 | Msa1022580 | 0.853173 | 2.846873e-61 | -8.615850e-47 |
| Msa0024280 | Msa1024350 | 0.863684 | 2.087471e-64 | -8.615850e-47 |
| Msa0024280 | Msa1026050 | 0.828438 | 8.988021e-55 | -8.615850e-47 |
| Msa0024280 | Msa1036590 | 0.803733 | 3.027684e-49 | -8.615850e-47 |
| Msa0024280 | Msa1037350 | 0.805059 | 1.602913e-49 | -8.615850e-47 |
| Msa0024280 | Msa1041630 | 0.807819 | 4.194494e-50 | -8.615850e-47 |
| Msa0024280 | Msa1046210 | 0.837463 | 5.120930e-57 | -8.615850e-47 |
| Msa0024280 | Msa1048350 | 0.803349 | 3.637155e-49 | -8.615850e-47 |
| Msa0024280 | Msa1060320 | 0.825887 | 3.668851e-54 | -8.615850e-47 |
| Msa0024280 | Msa1061670 | 0.852705 | 3.874790e-61 | -8.615850e-47 |
| Msa0024280 | Msa1064940 | 0.809687 | 1.673267e-50 | -8.615850e-47 |
| Msa0024280 | Msa1076830 | 0.835758 | 1.392369e-56 | -8.615850e-47 |
| Msa0024280 | Msa1076900 | 0.806638 | 7.462430e-50 | -8.615850e-47 |
| Msa0024280 | Msa1081610 | 0.816941 | 4.265991e-52 | -8.615850e-47 |
| Msa0024280 | Msa1087380 | 0.811180 | 7.962964e-51 | -8.615850e-47 |
| Msa0024280 | Msa1091000 | 0.826354 | 2.841086e-54 | -8.615850e-47 |
| Msa0024280 | Msa1104960 | 0.845822 | 3.194521e-59 | -8.615850e-47 |
| Msa0024280 | Msa1106680 | 0.816178 | 6.320965e-52 | -8.615850e-47 |
| Msa0024280 | Msa1106750 | 0.804771 | 1.841019e-49 | -8.615850e-47 |
| Msa0024280 | Msa1106960 | 0.838657 | 2.525403e-57 | -8.615850e-47 |
| Msa0024280 | Msa1109880 | 0.840745 | 7.227033e-58 | -8.615850e-47 |
| Msa0024280 | Msa1109890 | 0.863651 | 2.137636e-64 | -8.615850e-47 |
| Msa0024280 | Msa1115900 | 0.813041 | 3.128863e-51 | -8.615850e-47 |
| Msa0024280 | Msa1123010 | 0.801704 | 7.940957e-49 | -8.615850e-47 |
| Msa0024280 | Msa1133860 | 0.854572 | 1.126028e-61 | -8.615850e-47 |
| Msa0024280 | Msa1147030 | 0.831695 | 1.442616e-55 | -8.615850e-47 |
| Msa0024280 | Msa1148210 | 0.810087 | 1.371849e-50 | -8.615850e-47 |
| Msa0024280 | Msa1149020 | 0.898794 | 3.740261e-77 | -8.615850e-47 |
| Msa0024280 | Msa1150150 | 0.805676 | 1.190054e-49 | -8.615850e-47 |
| Msa0024280 | Msa1152180 | 0.805640 | 1.210809e-49 | -8.615850e-47 |
| Msa0024280 | Msa1156240 | 0.801904 | 7.223489e-49 | -8.615850e-47 |
| Msa0024280 | Msa1163670 | 0.809455 | 1.876656e-50 | -8.615850e-47 |
| Msa0024280 | Msa1164240 | 0.806576 | 7.691781e-50 | -8.615850e-47 |
| Msa0024280 | Msa1166530 | 0.821197 | 4.588382e-53 | -8.615850e-47 |
| Msa0024280 | Msa1170320 | 0.814319 | 1.636862e-51 | -8.615850e-47 |
| Msa0024280 | Msa1214960 | 0.810862 | 9.334963e-51 | -8.615850e-47 |
| Msa0024280 | Msa1216600 | 0.812540 | 4.026823e-51 | -8.615850e-47 |
| Msa0024280 | Msa1233630 | 0.803021 | 4.253003e-49 | -8.615850e-47 |
| Msa0024280 | Msa1269050 | 0.842956 | 1.883505e-58 | -8.615850e-47 |
| Msa0024280 | Msa1286420 | 0.846577 | 1.990421e-59 | -8.615850e-47 |
| Msa0024280 | Msa1296870 | 0.814914 | 1.208622e-51 | -8.615850e-47 |
| Msa0024280 | Msa1300610 | 0.832905 | 7.238015e-56 | -8.615850e-47 |
| Msa0024280 | Msa1319290 | 0.803477 | 3.420934e-49 | -8.615850e-47 |
| Msa0024280 | Msa1323030 | 0.832532 | 8.961056e-56 | -8.615850e-47 |
| Msa0024280 | Msa1323120 | 0.943216 | 1.794107e-102 | -8.615850e-47 |
| Msa0024280 | Msa1323160 | 0.807358 | 5.256973e-50 | -8.615850e-47 |
| Msa0024280 | Msa1329740 | 0.829340 | 5.437126e-55 | -8.615850e-47 |
| Msa0024280 | Msa1355340 | 0.820897 | 5.380216e-53 | -8.615850e-47 |
| Msa0024280 | Msa1357490 | 0.821706 | 3.500483e-53 | -8.615850e-47 |
| Msa0024280 | Msa1357750 | 0.811005 | 8.690694e-51 | -8.615850e-47 |
| Msa0024280 | Msa1357860 | 0.827472 | 1.535031e-54 | -8.615850e-47 |
| Msa0024280 | Msa1368490 | 0.800658 | 1.299577e-48 | -8.615850e-47 |
| Msa0024280 | Msa1376070 | 0.840657 | 7.622029e-58 | -8.615850e-47 |
| Msa0024280 | Msa1377460 | 0.805430 | 1.340243e-49 | -8.615850e-47 |
| Msa0024280 | Msa1377520 | 0.856375 | 3.358065e-62 | -8.615850e-47 |
| Msa0024280 | Msa1393440 | 0.800749 | 1.245271e-48 | -8.615850e-47 |
| Msa0024280 | Msa1407670 | 0.850280 | 1.880241e-60 | -8.615850e-47 |
| Msa0024280 | Msa1409600 | 0.805216 | 1.485692e-49 | -8.615850e-47 |
| Msa0024280 | Msa1420020 | 0.833022 | 6.771268e-56 | -8.615850e-47 |
| Msa0024280 | Msa1421120 | 0.810983 | 8.785792e-51 | -8.615850e-47 |
| Msa0024280 | Msa1421130 | 0.812365 | 4.398235e-51 | -8.615850e-47 |
| Msa0024280 | Msa1445900 | 0.842935 | 1.907469e-58 | -8.615850e-47 |
| Msa0024280 | Msa1449770 | 0.851869 | 6.699111e-61 | -8.615850e-47 |
| Msa0024280 | Msa1456600 | 0.807723 | 4.397493e-50 | -8.615850e-47 |
| Msa0024280 | Msa1459610 | 0.854403 | 1.260243e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0024280 | MtrunA17_Chr1g0178161 | 95.918 | 196 | 8 | 0 | 1 | 196 | 1 | 196 | 2.06e-120 | 338 |
| Msa0024280 | MtrunA17_Chr1g0178191 | 77.041 | 196 | 43 | 1 | 1 | 196 | 1 | 194 | 2.52e-93 | 270 |
| Msa0024280 | MtrunA17_Chr1g0178181 | 80.102 | 196 | 38 | 1 | 1 | 196 | 1 | 195 | 9.05e-92 | 266 |
| Msa0024280 | MtrunA17_Chr2g0321671 | 52.857 | 210 | 83 | 1 | 2 | 195 | 10 | 219 | 1.81e-59 | 185 |
| Msa0024280 | MtrunA17_Chr7g0217691 | 45.263 | 190 | 100 | 1 | 7 | 196 | 1 | 186 | 2.62e-52 | 166 |
| Msa0024280 | MtrunA17_Chr4g0042551 | 42.197 | 173 | 100 | 0 | 23 | 195 | 44 | 216 | 2.93e-47 | 154 |
| Msa0024280 | MtrunA17_Chr5g0417761 | 40.722 | 194 | 102 | 2 | 4 | 196 | 5 | 186 | 1.15e-41 | 139 |
| Msa0024280 | MtrunA17_Chr4g0021111 | 34.615 | 156 | 87 | 4 | 37 | 189 | 7 | 150 | 3.16e-18 | 77.8 |
| Msa0024280 | MtrunA17_Chr2g0303151 | 34.167 | 120 | 73 | 3 | 73 | 189 | 69 | 185 | 1.27e-12 | 63.9 |
| Msa0024280 | MtrunA17_Chr3g0109681 | 27.564 | 156 | 96 | 3 | 42 | 193 | 49 | 191 | 3.74e-11 | 60.1 |
| Msa0024280 | MtrunA17_Chr8g0381001 | 29.114 | 158 | 99 | 4 | 42 | 189 | 30 | 184 | 5.02e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0024280 | AT2G36100.1 | 54.950 | 202 | 84 | 2 | 2 | 196 | 5 | 206 | 3.36e-68 | 207 |
| Msa0024280 | AT3G11550.1 | 60.500 | 200 | 74 | 1 | 2 | 196 | 5 | 204 | 2.83e-64 | 197 |
| Msa0024280 | AT2G27370.1 | 55.978 | 184 | 74 | 1 | 12 | 195 | 43 | 219 | 7.01e-64 | 197 |
| Msa0024280 | AT5G06200.1 | 58.586 | 198 | 77 | 2 | 2 | 195 | 5 | 201 | 1.07e-63 | 196 |
| Msa0024280 | AT5G15290.1 | 44.000 | 150 | 84 | 0 | 27 | 176 | 17 | 166 | 4.72e-44 | 145 |
| Msa0024280 | AT1G14160.1 | 40.000 | 165 | 99 | 0 | 32 | 196 | 45 | 209 | 8.61e-42 | 140 |
| Msa0024280 | AT1G03700.1 | 30.769 | 169 | 99 | 3 | 21 | 189 | 1 | 151 | 2.00e-17 | 76.3 |
| Msa0024280 | AT1G17200.1 | 26.984 | 189 | 125 | 5 | 9 | 193 | 2 | 181 | 2.42e-14 | 68.9 |
| Msa0024280 | AT4G03540.1 | 32.258 | 124 | 75 | 2 | 55 | 178 | 26 | 140 | 1.09e-13 | 66.2 |
| Msa0024280 | AT3G06390.1 | 27.820 | 133 | 91 | 2 | 38 | 165 | 37 | 169 | 5.83e-11 | 59.7 |
Find 42 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCCATTTGCAACCAATT+TGG | 0.187527 | 1_1:-46709471 | Msa0024280:CDS |
| GTTGGTTGTGATGTCTTCTT+TGG | 0.281389 | 1_1:-46709382 | Msa0024280:CDS |
| GTGATGTCTTCTTTGGCTCT+TGG | 0.299534 | 1_1:-46709375 | Msa0024280:CDS |
| TCTTAGAACAAAATCCATTA+TGG | 0.318159 | 1_1:+46710525 | None:intergenic |
| ATGATGGTTACTATGGAAAA+TGG | 0.329026 | 1_1:+46710124 | None:intergenic |
| TGATGTCTTCTTTGGCTCTT+GGG | 0.348436 | 1_1:-46709374 | Msa0024280:CDS |
| GGCATTTGTGGGTGGCTACC+TGG | 0.401958 | 1_1:-46710158 | Msa0024280:CDS |
| AATGTCAACCACTATTGATA+TGG | 0.415102 | 1_1:-46710632 | Msa0024280:CDS |
| AGGGCGAATGATGGTTACTA+TGG | 0.422728 | 1_1:+46710117 | None:intergenic |
| CATAACTAGCTTCAAATTGA+AGG | 0.426220 | 1_1:+46710422 | None:intergenic |
| ATTGGAGCCACTGCAAGGCC+TGG | 0.429435 | 1_1:-46710568 | Msa0024280:CDS |
| ACGGCAATCAAGACTCAAAC+TGG | 0.435689 | 1_1:-46709494 | Msa0024280:CDS |
| ATCTCCAAATTGGTTGCAAA+TGG | 0.439108 | 1_1:+46709467 | None:intergenic |
| TGTTATTGCAATGGCATTTG+TGG | 0.446696 | 1_1:-46710170 | Msa0024280:CDS |
| GTTATTGCAATGGCATTTGT+GGG | 0.458726 | 1_1:-46710169 | Msa0024280:CDS |
| ATCATTCGCCCTCATGCACC+TGG | 0.484461 | 1_1:-46710106 | Msa0024280:CDS |
| TGGTTACTATGGAAAATGGT+AGG | 0.486275 | 1_1:+46710128 | None:intergenic |
| TGGTGCTTCAGCAGCTGCCA+TGG | 0.489524 | 1_1:-46709532 | Msa0024280:CDS |
| TGAAGGAACTGAGTGAAGAA+AGG | 0.493692 | 1_1:+46710439 | None:intergenic |
| TGACTCTGCCATATCAATAG+TGG | 0.510355 | 1_1:+46710624 | None:intergenic |
| TGTGTAGGTGTTTATGACAT+TGG | 0.523787 | 1_1:-46709565 | Msa0024280:intron |
| CCACTGCAAGGCCTGGAGGA+TGG | 0.524990 | 1_1:-46710561 | Msa0024280:CDS |
| TGCAGCAAGAGAAGCTGCTA+TGG | 0.527344 | 1_1:+46710495 | None:intergenic |
| CCATCCTCCAGGCCTTGCAG+TGG | 0.532661 | 1_1:+46710561 | None:intergenic |
| ATGAGGAAAAGCCTTGGTCC+AGG | 0.542585 | 1_1:+46710088 | None:intergenic |
| CTTTAATTGGAGCCACTGCA+AGG | 0.554612 | 1_1:-46710573 | Msa0024280:CDS |
| GGTTACTATGGAAAATGGTA+GGG | 0.561081 | 1_1:+46710129 | None:intergenic |
| ATGACATTGGCCACTGCTAG+TGG | 0.562153 | 1_1:-46709552 | Msa0024280:CDS |
| TGCTGAAGCACCACTAGCAG+TGG | 0.566597 | 1_1:+46709542 | None:intergenic |
| AGCCTTGGTCCAGGTGCATG+AGG | 0.573726 | 1_1:+46710097 | None:intergenic |
| AGGTGCATGAGGGCGAATGA+TGG | 0.573876 | 1_1:+46710108 | None:intergenic |
| GCCCTCATGCACCTGGACCA+AGG | 0.587519 | 1_1:-46710099 | Msa0024280:CDS |
| AATCTGATCACTAGTTGCCA+TGG | 0.596028 | 1_1:+46710465 | None:intergenic |
| ATTGCAATGGCATTTGTGGG+TGG | 0.596308 | 1_1:-46710166 | Msa0024280:CDS |
| GCGATGATGAGGAAAAGCCT+TGG | 0.613791 | 1_1:+46710082 | None:intergenic |
| GCCTTGGTCCAGGTGCATGA+GGG | 0.623258 | 1_1:+46710098 | None:intergenic |
| GGAGCCACTGCAAGGCCTGG+AGG | 0.665040 | 1_1:-46710565 | Msa0024280:CDS |
| TTACTGTGTCTGCGATGATG+AGG | 0.667059 | 1_1:+46710071 | None:intergenic |
| TCTTGCTGCAACTATCACCA+TGG | 0.694318 | 1_1:-46710482 | Msa0024280:CDS |
| ATGGTTTACTTAGCACACAA+CGG | 0.696529 | 1_1:-46709513 | Msa0024280:CDS |
| AAAATGGTAGGGATAAGACC+AGG | 0.708096 | 1_1:+46710140 | None:intergenic |
| GTTGTGTGCTAAGTAAACCA+TGG | 0.799684 | 1_1:+46709515 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAGAAATTATTTAAGTTAG+AGG | + | chr1_1:46709635-46709654 | None:intergenic | 15.0% |
| !! | TAAGAATTAATTAGGAAATT+AGG | + | chr1_1:46709958-46709977 | None:intergenic | 15.0% |
| !! | ACTCTAATTAAGAATTAATT+AGG | + | chr1_1:46709966-46709985 | None:intergenic | 15.0% |
| !! | TTCATGTAAAAAAAATTGAA+GGG | + | chr1_1:46710009-46710028 | None:intergenic | 15.0% |
| !! | TAAAAAAAAATCAATAAAGC+AGG | + | chr1_1:46710117-46710136 | None:intergenic | 15.0% |
| !!! | ATAGAAATTATTTAAGTTAG+AGG | + | chr1_1:46709635-46709654 | None:intergenic | 15.0% |
| !! | TAAGAATTAATTAGGAAATT+AGG | + | chr1_1:46709958-46709977 | None:intergenic | 15.0% |
| !! | ACTCTAATTAAGAATTAATT+AGG | + | chr1_1:46709966-46709985 | None:intergenic | 15.0% |
| !! | TTCATGTAAAAAAAATTGAA+GGG | + | chr1_1:46710009-46710028 | None:intergenic | 15.0% |
| !! | TAAAAAAAAATCAATAAAGC+AGG | + | chr1_1:46710117-46710136 | None:intergenic | 15.0% |
| !! | AAAGTTTATTCTAAATATGC+AGG | - | chr1_1:46709798-46709817 | Msa0024280:intron | 20.0% |
| !! | GTTCATGTAAAAAAAATTGA+AGG | + | chr1_1:46710010-46710029 | None:intergenic | 20.0% |
| !! | ATGAACATATATATTCTAGT+AGG | - | chr1_1:46710024-46710043 | Msa0024280:intron | 20.0% |
| !!! | GTTAAGTACTTTTAAAAAAC+TGG | - | chr1_1:46710305-46710324 | Msa0024280:intron | 20.0% |
| !! | AAAGTTTATTCTAAATATGC+AGG | - | chr1_1:46709798-46709817 | Msa0024280:intron | 20.0% |
| !! | GTTCATGTAAAAAAAATTGA+AGG | + | chr1_1:46710010-46710029 | None:intergenic | 20.0% |
| !! | ATGAACATATATATTCTAGT+AGG | - | chr1_1:46710024-46710043 | Msa0024280:intron | 20.0% |
| !!! | GTTAAGTACTTTTAAAAAAC+TGG | - | chr1_1:46710305-46710324 | Msa0024280:intron | 20.0% |
| !! | AATGAAAAAGCTGCTTTAAT+TGG | - | chr1_1:46709410-46709429 | Msa0024280:CDS | 25.0% |
| ! | TCTTAGAACAAAATCCATTA+TGG | + | chr1_1:46709474-46709493 | None:intergenic | 25.0% |
| !!! | ATGGATTTTGTTCTAAGATT+AGG | - | chr1_1:46709476-46709495 | Msa0024280:CDS | 25.0% |
| !! | AATGAAAAAGCTGCTTTAAT+TGG | - | chr1_1:46709410-46709429 | Msa0024280:CDS | 25.0% |
| ! | TCTTAGAACAAAATCCATTA+TGG | + | chr1_1:46709474-46709493 | None:intergenic | 25.0% |
| !!! | ATGGATTTTGTTCTAAGATT+AGG | - | chr1_1:46709476-46709495 | Msa0024280:CDS | 25.0% |
| ! | CATAACTAGCTTCAAATTGA+AGG | + | chr1_1:46709577-46709596 | None:intergenic | 30.0% |
| ! | GTGTAGTTCAAATTTTGTGT+TGG | + | chr1_1:46709692-46709711 | None:intergenic | 30.0% |
| !!! | CAGGTTTTTTGTTATTGCAA+TGG | - | chr1_1:46709817-46709836 | Msa0024280:intron | 30.0% |
| ATGATGGTTACTATGGAAAA+TGG | + | chr1_1:46709875-46709894 | None:intergenic | 30.0% | |
| ATTACTCCTTGTGTTTCTTT+CGG | - | chr1_1:46710067-46710086 | Msa0024280:intron | 30.0% | |
| GAAGATAAATTGACACAATG+AGG | - | chr1_1:46710212-46710231 | Msa0024280:intron | 30.0% | |
| AATGAGGAAATGAACTATGA+AGG | - | chr1_1:46710228-46710247 | Msa0024280:intron | 30.0% | |
| ATGAGGAAATGAACTATGAA+GGG | - | chr1_1:46710229-46710248 | Msa0024280:intron | 30.0% | |
| ! | AAACTCAAACTTTTCTGTGT+AGG | - | chr1_1:46710416-46710435 | Msa0024280:CDS | 30.0% |
| !!! | TATTGCTGTGGTTGTTTTAA+TGG | - | chr1_1:46710590-46710609 | Msa0024280:CDS | 30.0% |
| ! | CATAACTAGCTTCAAATTGA+AGG | + | chr1_1:46709577-46709596 | None:intergenic | 30.0% |
| ! | GTGTAGTTCAAATTTTGTGT+TGG | + | chr1_1:46709692-46709711 | None:intergenic | 30.0% |
| !!! | CAGGTTTTTTGTTATTGCAA+TGG | - | chr1_1:46709817-46709836 | Msa0024280:intron | 30.0% |
| ATGATGGTTACTATGGAAAA+TGG | + | chr1_1:46709875-46709894 | None:intergenic | 30.0% | |
| ATTACTCCTTGTGTTTCTTT+CGG | - | chr1_1:46710067-46710086 | Msa0024280:intron | 30.0% | |
| GAAGATAAATTGACACAATG+AGG | - | chr1_1:46710212-46710231 | Msa0024280:intron | 30.0% | |
| AATGAGGAAATGAACTATGA+AGG | - | chr1_1:46710228-46710247 | Msa0024280:intron | 30.0% | |
| ATGAGGAAATGAACTATGAA+GGG | - | chr1_1:46710229-46710248 | Msa0024280:intron | 30.0% | |
| ! | AAACTCAAACTTTTCTGTGT+AGG | - | chr1_1:46710416-46710435 | Msa0024280:CDS | 30.0% |
| !!! | TATTGCTGTGGTTGTTTTAA+TGG | - | chr1_1:46710590-46710609 | Msa0024280:CDS | 30.0% |
| ! | GAAAAAAGGCATAGCCATAA+TGG | - | chr1_1:46709457-46709476 | Msa0024280:CDS | 35.0% |
| AATACACCTAGGGTTTACAA+TGG | + | chr1_1:46709665-46709684 | None:intergenic | 35.0% | |
| TGTTGGACTAAATACACCTA+GGG | + | chr1_1:46709675-46709694 | None:intergenic | 35.0% | |
| TGTTATTGCAATGGCATTTG+TGG | - | chr1_1:46709826-46709845 | Msa0024280:intron | 35.0% | |
| GTTATTGCAATGGCATTTGT+GGG | - | chr1_1:46709827-46709846 | Msa0024280:intron | 35.0% | |
| GGTTACTATGGAAAATGGTA+GGG | + | chr1_1:46709870-46709889 | None:intergenic | 35.0% | |
| TGGTTACTATGGAAAATGGT+AGG | + | chr1_1:46709871-46709890 | None:intergenic | 35.0% | |
| TGTGTAGGTGTTTATGACAT+TGG | - | chr1_1:46710431-46710450 | Msa0024280:CDS | 35.0% | |
| ATGGTTTACTTAGCACACAA+CGG | - | chr1_1:46710483-46710502 | Msa0024280:CDS | 35.0% | |
| ATCTCCAAATTGGTTGCAAA+TGG | + | chr1_1:46710532-46710551 | None:intergenic | 35.0% | |
| GTGCACAAAAATCTCCAAAT+TGG | + | chr1_1:46710542-46710561 | None:intergenic | 35.0% | |
| !! | TGTGTCATGTTTTATTGCTG+TGG | - | chr1_1:46710578-46710597 | Msa0024280:CDS | 35.0% |
| !!! | TGTGGTTGTTTTAATGGTGT+TGG | - | chr1_1:46710596-46710615 | Msa0024280:CDS | 35.0% |
| ! | GAAAAAAGGCATAGCCATAA+TGG | - | chr1_1:46709457-46709476 | Msa0024280:CDS | 35.0% |
| AATACACCTAGGGTTTACAA+TGG | + | chr1_1:46709665-46709684 | None:intergenic | 35.0% | |
| TGTTGGACTAAATACACCTA+GGG | + | chr1_1:46709675-46709694 | None:intergenic | 35.0% | |
| TGTTATTGCAATGGCATTTG+TGG | - | chr1_1:46709826-46709845 | Msa0024280:intron | 35.0% | |
| GTTATTGCAATGGCATTTGT+GGG | - | chr1_1:46709827-46709846 | Msa0024280:intron | 35.0% | |
| GGTTACTATGGAAAATGGTA+GGG | + | chr1_1:46709870-46709889 | None:intergenic | 35.0% | |
| TGGTTACTATGGAAAATGGT+AGG | + | chr1_1:46709871-46709890 | None:intergenic | 35.0% | |
| TGTGTAGGTGTTTATGACAT+TGG | - | chr1_1:46710431-46710450 | Msa0024280:CDS | 35.0% | |
| ATGGTTTACTTAGCACACAA+CGG | - | chr1_1:46710483-46710502 | Msa0024280:CDS | 35.0% | |
| ATCTCCAAATTGGTTGCAAA+TGG | + | chr1_1:46710532-46710551 | None:intergenic | 35.0% | |
| GTGCACAAAAATCTCCAAAT+TGG | + | chr1_1:46710542-46710561 | None:intergenic | 35.0% | |
| !! | TGTGTCATGTTTTATTGCTG+TGG | - | chr1_1:46710578-46710597 | Msa0024280:CDS | 35.0% |
| !!! | TGTGGTTGTTTTAATGGTGT+TGG | - | chr1_1:46710596-46710615 | Msa0024280:CDS | 35.0% |
| TGACTCTGCCATATCAATAG+TGG | + | chr1_1:46709375-46709394 | None:intergenic | 40.0% | |
| AATCTGATCACTAGTTGCCA+TGG | + | chr1_1:46709534-46709553 | None:intergenic | 40.0% | |
| TGAAGGAACTGAGTGAAGAA+AGG | + | chr1_1:46709560-46709579 | None:intergenic | 40.0% | |
| GTGTTGGACTAAATACACCT+AGG | + | chr1_1:46709676-46709695 | None:intergenic | 40.0% | |
| AAAATGGTAGGGATAAGACC+AGG | + | chr1_1:46709859-46709878 | None:intergenic | 40.0% | |
| GTTGTGTGCTAAGTAAACCA+TGG | + | chr1_1:46710484-46710503 | None:intergenic | 40.0% | |
| ! | CTTGCCATTTGCAACCAATT+TGG | - | chr1_1:46710525-46710544 | Msa0024280:CDS | 40.0% |
| ! | GATTTTTGTGCACAGACAAG+TGG | - | chr1_1:46710549-46710568 | Msa0024280:CDS | 40.0% |
| GTTGGTTGTGATGTCTTCTT+TGG | - | chr1_1:46710614-46710633 | Msa0024280:CDS | 40.0% | |
| !! | TGATGTCTTCTTTGGCTCTT+GGG | - | chr1_1:46710622-46710641 | Msa0024280:CDS | 40.0% |
| TGACTCTGCCATATCAATAG+TGG | + | chr1_1:46709375-46709394 | None:intergenic | 40.0% | |
| AATCTGATCACTAGTTGCCA+TGG | + | chr1_1:46709534-46709553 | None:intergenic | 40.0% | |
| TGAAGGAACTGAGTGAAGAA+AGG | + | chr1_1:46709560-46709579 | None:intergenic | 40.0% | |
| GTGTTGGACTAAATACACCT+AGG | + | chr1_1:46709676-46709695 | None:intergenic | 40.0% | |
| AAAATGGTAGGGATAAGACC+AGG | + | chr1_1:46709859-46709878 | None:intergenic | 40.0% | |
| GTTGTGTGCTAAGTAAACCA+TGG | + | chr1_1:46710484-46710503 | None:intergenic | 40.0% | |
| ! | CTTGCCATTTGCAACCAATT+TGG | - | chr1_1:46710525-46710544 | Msa0024280:CDS | 40.0% |
| ! | GATTTTTGTGCACAGACAAG+TGG | - | chr1_1:46710549-46710568 | Msa0024280:CDS | 40.0% |
| GTTGGTTGTGATGTCTTCTT+TGG | - | chr1_1:46710614-46710633 | Msa0024280:CDS | 40.0% | |
| !! | TGATGTCTTCTTTGGCTCTT+GGG | - | chr1_1:46710622-46710641 | Msa0024280:CDS | 40.0% |
| CTTTAATTGGAGCCACTGCA+AGG | - | chr1_1:46709423-46709442 | Msa0024280:CDS | 45.0% | |
| !!! | ATGCCTTTTTTCCATCCTCC+AGG | + | chr1_1:46709449-46709468 | None:intergenic | 45.0% |
| TCTTGCTGCAACTATCACCA+TGG | - | chr1_1:46709514-46709533 | Msa0024280:CDS | 45.0% | |
| GAGGTTTGAGTGTGACATAC+TGG | + | chr1_1:46709616-46709635 | None:intergenic | 45.0% | |
| CACCTAGGGTTTACAATGGA+GGG | + | chr1_1:46709661-46709680 | None:intergenic | 45.0% | |
| ACACCTAGGGTTTACAATGG+AGG | + | chr1_1:46709662-46709681 | None:intergenic | 45.0% | |
| ATTGCAATGGCATTTGTGGG+TGG | - | chr1_1:46709830-46709849 | Msa0024280:intron | 45.0% | |
| AGGGCGAATGATGGTTACTA+TGG | + | chr1_1:46709882-46709901 | None:intergenic | 45.0% | |
| TTACTGTGTCTGCGATGATG+AGG | + | chr1_1:46709928-46709947 | None:intergenic | 45.0% | |
| TAGAGGCCGAAAGAAACACA+AGG | + | chr1_1:46710076-46710095 | None:intergenic | 45.0% | |
| ACGGCAATCAAGACTCAAAC+TGG | - | chr1_1:46710502-46710521 | Msa0024280:CDS | 45.0% | |
| !! | GTGATGTCTTCTTTGGCTCT+TGG | - | chr1_1:46710621-46710640 | Msa0024280:CDS | 45.0% |
| CTTTAATTGGAGCCACTGCA+AGG | - | chr1_1:46709423-46709442 | Msa0024280:CDS | 45.0% | |
| !!! | ATGCCTTTTTTCCATCCTCC+AGG | + | chr1_1:46709449-46709468 | None:intergenic | 45.0% |
| TCTTGCTGCAACTATCACCA+TGG | - | chr1_1:46709514-46709533 | Msa0024280:CDS | 45.0% | |
| GAGGTTTGAGTGTGACATAC+TGG | + | chr1_1:46709616-46709635 | None:intergenic | 45.0% | |
| CACCTAGGGTTTACAATGGA+GGG | + | chr1_1:46709661-46709680 | None:intergenic | 45.0% | |
| ACACCTAGGGTTTACAATGG+AGG | + | chr1_1:46709662-46709681 | None:intergenic | 45.0% | |
| ATTGCAATGGCATTTGTGGG+TGG | - | chr1_1:46709830-46709849 | Msa0024280:intron | 45.0% | |
| AGGGCGAATGATGGTTACTA+TGG | + | chr1_1:46709882-46709901 | None:intergenic | 45.0% | |
| TTACTGTGTCTGCGATGATG+AGG | + | chr1_1:46709928-46709947 | None:intergenic | 45.0% | |
| TAGAGGCCGAAAGAAACACA+AGG | + | chr1_1:46710076-46710095 | None:intergenic | 45.0% | |
| ACGGCAATCAAGACTCAAAC+TGG | - | chr1_1:46710502-46710521 | Msa0024280:CDS | 45.0% | |
| !! | GTGATGTCTTCTTTGGCTCT+TGG | - | chr1_1:46710621-46710640 | Msa0024280:CDS | 45.0% |
| !!! | AATAATTATATTTAAAATAG+AGG | + | chr1_1:46710093-46710112 | None:intergenic | 5.0% |
| !!! | AATAATTATATTTAAAATAG+AGG | + | chr1_1:46710093-46710112 | None:intergenic | 5.0% |
| AGGCCTGGAGGATGGAAAAA+AGG | - | chr1_1:46709443-46709462 | Msa0024280:CDS | 50.0% | |
| TGCAGCAAGAGAAGCTGCTA+TGG | + | chr1_1:46709504-46709523 | None:intergenic | 50.0% | |
| CTCCCTCCATTGTAAACCCT+AGG | - | chr1_1:46709656-46709675 | Msa0024280:intron | 50.0% | |
| ATGAGGAAAAGCCTTGGTCC+AGG | + | chr1_1:46709911-46709930 | None:intergenic | 50.0% | |
| GCGATGATGAGGAAAAGCCT+TGG | + | chr1_1:46709917-46709936 | None:intergenic | 50.0% | |
| ATGACATTGGCCACTGCTAG+TGG | - | chr1_1:46710444-46710463 | Msa0024280:CDS | 50.0% | |
| AGGCCTGGAGGATGGAAAAA+AGG | - | chr1_1:46709443-46709462 | Msa0024280:CDS | 50.0% | |
| TGCAGCAAGAGAAGCTGCTA+TGG | + | chr1_1:46709504-46709523 | None:intergenic | 50.0% | |
| CTCCCTCCATTGTAAACCCT+AGG | - | chr1_1:46709656-46709675 | Msa0024280:intron | 50.0% | |
| ATGAGGAAAAGCCTTGGTCC+AGG | + | chr1_1:46709911-46709930 | None:intergenic | 50.0% | |
| GCGATGATGAGGAAAAGCCT+TGG | + | chr1_1:46709917-46709936 | None:intergenic | 50.0% | |
| ATGACATTGGCCACTGCTAG+TGG | - | chr1_1:46710444-46710463 | Msa0024280:CDS | 50.0% | |
| AGGTGCATGAGGGCGAATGA+TGG | + | chr1_1:46709891-46709910 | None:intergenic | 55.0% | |
| ATCATTCGCCCTCATGCACC+TGG | - | chr1_1:46709890-46709909 | Msa0024280:intron | 55.0% | |
| ! | TGCTGAAGCACCACTAGCAG+TGG | + | chr1_1:46710457-46710476 | None:intergenic | 55.0% |
| AGGTGCATGAGGGCGAATGA+TGG | + | chr1_1:46709891-46709910 | None:intergenic | 55.0% | |
| ATCATTCGCCCTCATGCACC+TGG | - | chr1_1:46709890-46709909 | Msa0024280:intron | 55.0% | |
| ! | TGCTGAAGCACCACTAGCAG+TGG | + | chr1_1:46710457-46710476 | None:intergenic | 55.0% |
| ATTGGAGCCACTGCAAGGCC+TGG | - | chr1_1:46709428-46709447 | Msa0024280:CDS | 60.0% | |
| GGCATTTGTGGGTGGCTACC+TGG | - | chr1_1:46709838-46709857 | Msa0024280:intron | 60.0% | |
| GCCTTGGTCCAGGTGCATGA+GGG | + | chr1_1:46709901-46709920 | None:intergenic | 60.0% | |
| AGCCTTGGTCCAGGTGCATG+AGG | + | chr1_1:46709902-46709921 | None:intergenic | 60.0% | |
| TGGTGCTTCAGCAGCTGCCA+TGG | - | chr1_1:46710464-46710483 | Msa0024280:CDS | 60.0% | |
| ATTGGAGCCACTGCAAGGCC+TGG | - | chr1_1:46709428-46709447 | Msa0024280:CDS | 60.0% | |
| GGCATTTGTGGGTGGCTACC+TGG | - | chr1_1:46709838-46709857 | Msa0024280:intron | 60.0% | |
| GCCTTGGTCCAGGTGCATGA+GGG | + | chr1_1:46709901-46709920 | None:intergenic | 60.0% | |
| AGCCTTGGTCCAGGTGCATG+AGG | + | chr1_1:46709902-46709921 | None:intergenic | 60.0% | |
| TGGTGCTTCAGCAGCTGCCA+TGG | - | chr1_1:46710464-46710483 | Msa0024280:CDS | 60.0% | |
| CCATCCTCCAGGCCTTGCAG+TGG | + | chr1_1:46709438-46709457 | None:intergenic | 65.0% | |
| CCACTGCAAGGCCTGGAGGA+TGG | - | chr1_1:46709435-46709454 | Msa0024280:CDS | 65.0% | |
| GCCCTCATGCACCTGGACCA+AGG | - | chr1_1:46709897-46709916 | Msa0024280:intron | 65.0% | |
| CCATCCTCCAGGCCTTGCAG+TGG | + | chr1_1:46709438-46709457 | None:intergenic | 65.0% | |
| CCACTGCAAGGCCTGGAGGA+TGG | - | chr1_1:46709435-46709454 | Msa0024280:CDS | 65.0% | |
| GCCCTCATGCACCTGGACCA+AGG | - | chr1_1:46709897-46709916 | Msa0024280:intron | 65.0% | |
| GGAGCCACTGCAAGGCCTGG+AGG | - | chr1_1:46709431-46709450 | Msa0024280:CDS | 70.0% | |
| GGAGCCACTGCAAGGCCTGG+AGG | - | chr1_1:46709431-46709450 | Msa0024280:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 46709365 | 46710653 | 46709365 | ID=Msa0024280;Name=Msa0024280 |
| chr1_1 | mRNA | 46709365 | 46710653 | 46709365 | ID=Msa0024280-mRNA-1;Parent=Msa0024280;Name=Msa0024280-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|196 |
| chr1_1 | exon | 46710403 | 46710653 | 46710403 | ID=Msa0024280-mRNA-1:exon:13285;Parent=Msa0024280-mRNA-1 |
| chr1_1 | exon | 46710075 | 46710198 | 46710075 | ID=Msa0024280-mRNA-1:exon:13284;Parent=Msa0024280-mRNA-1 |
| chr1_1 | exon | 46709365 | 46709580 | 46709365 | ID=Msa0024280-mRNA-1:exon:13283;Parent=Msa0024280-mRNA-1 |
| chr1_1 | CDS | 46710403 | 46710653 | 46710403 | ID=Msa0024280-mRNA-1:cds;Parent=Msa0024280-mRNA-1 |
| chr1_1 | CDS | 46710075 | 46710198 | 46710075 | ID=Msa0024280-mRNA-1:cds;Parent=Msa0024280-mRNA-1 |
| chr1_1 | CDS | 46709365 | 46709580 | 46709365 | ID=Msa0024280-mRNA-1:cds;Parent=Msa0024280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
