AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0469040


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0469040 MtrunA17_Chr3g0123361 96.585 820 15 3 1 815 1 812 0.0 1623
Msa0469040 MtrunA17_Chr4g0000571 47.162 511 191 9 19 520 20 460 4.84e-129 394
Msa0469040 MtrunA17_Chr4g0000561 46.622 444 179 9 19 448 138 537 1.75e-112 353
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0469040 AT1G13160.1 51.691 828 332 10 18 815 15 804 0.0 762
Msa0469040 AT4G31520.1 47.313 763 302 12 88 815 1 698 0.0 643
Msa0469040 AT4G31520.2 45.508 679 270 12 88 731 1 614 0.0 535

Find 197 sgRNAs with CRISPR-Local

Find 459 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATACACTTTCGTTGTTTA+TGG 0.108154 3_3:-70713072 Msa0469040:CDS
TGGCTTCATCCTTATGCTTT+TGG 0.189883 3_3:+70712973 None:intergenic
CTCATGTGACTTCTTATATA+GGG 0.264350 3_3:+70709091 None:intergenic
TCTCATGTGACTTCTTATAT+AGG 0.264450 3_3:+70709090 None:intergenic
CACCTCAAGTTATTCTTAGA+AGG 0.274420 3_3:-70712385 Msa0469040:CDS
AGAGAGGTGCTGAGGGTAAA+AGG 0.276260 3_3:+70713308 None:intergenic
AGCTTTATCGGCAAGATCTT+TGG 0.285756 3_3:+70713353 None:intergenic
TAAGCCTTTGGTCTTGCCTT+GGG 0.288436 3_3:+70708876 None:intergenic
AGTTCGGATTCGTAGCCTTC+AGG 0.288526 3_3:+70713480 None:intergenic
TGGGAGGAAAGCGTGGAAAT+AGG 0.291046 3_3:-70707335 Msa0469040:exon
ATGAACTTCACTTCCATTTC+CGG 0.293716 3_3:-70713399 Msa0469040:CDS
TTTATAGAATTTCTTTAGAT+TGG 0.299879 3_3:-70707152 Msa0469040:three_prime_UTR
AAAAGTTTAACAACATTAAC+TGG 0.315137 3_3:+70710021 None:intergenic
AGCAACTCAGCGAGTTTGTT+AGG 0.319583 3_3:+70713279 None:intergenic
TAGAAGGGAGACGGTTTATA+AGG 0.324057 3_3:-70712369 Msa0469040:intron
AGCGGCTGTCAAACAGAAAA+AGG 0.332497 3_3:-70707894 Msa0469040:intron
TTTGATTGCAGCAGCGGTTC+AGG 0.336211 3_3:-70709865 Msa0469040:CDS
CTGGTGGTGGCTACGTTTCA+TGG 0.337870 3_3:+70713593 None:intergenic
TGAAGAGGATGGTGGGATTT+CGG 0.354594 3_3:-70708550 Msa0469040:CDS
AAGAAATAAATTTCTTCCTC+TGG 0.366191 3_3:+70707114 None:intergenic
AATTTGTAACATCTCGTTGA+TGG 0.369737 3_3:+70709886 None:intergenic
TTCATCTTTGATTGAAGTGC+TGG 0.370954 3_3:+70713510 None:intergenic
AAAGTGATAGCTCGAACAAT+TGG 0.375067 3_3:-70710050 Msa0469040:CDS
ATAAGCCTTTGGTCTTGCCT+TGG 0.384961 3_3:+70708875 None:intergenic
CCTTTAGTTCCTTGATCCTC+TGG 0.385498 3_3:+70708316 None:intergenic
GGCTTCATCATCATCACTTC+CGG 0.386181 3_3:+70708680 None:intergenic
GGTTCAGGCTTGCCATGATA+TGG 0.390505 3_3:-70709850 Msa0469040:intron
GATGGTGATCTGCATATTCT+TGG 0.390989 3_3:-70708516 Msa0469040:CDS
TTGACTTCTCCATAAGCCTT+TGG 0.392390 3_3:+70708864 None:intergenic
AAGGCAAGACCAAAGGCTTA+TGG 0.393421 3_3:-70708873 Msa0469040:CDS
AAGAATAACTTGAGGTGATT+CGG 0.393544 3_3:+70712391 None:intergenic
TGCTTTCATCATCACTATCT+TGG 0.393872 3_3:+70712429 None:intergenic
AATGTTGCGGCTGACGTTCC+TGG 0.394316 3_3:-70708843 Msa0469040:CDS
CCTCCGTCGCGGCATGGCTC+TGG 0.401059 3_3:+70713574 None:intergenic
GCTGCTCGAACACTTCCTTC+TGG 0.402199 3_3:-70713249 Msa0469040:CDS
AGAGAGGAACATAGCTTTAT+CGG 0.404843 3_3:+70713341 None:intergenic
GTCGTTGGAGATGCCGGAAA+TGG 0.407008 3_3:+70713386 None:intergenic
GGGAGGAAAGCGTGGAAATA+GGG 0.412726 3_3:-70707334 Msa0469040:exon
TGGATATATTTCTGAAGATA+AGG 0.421960 3_3:+70709996 None:intergenic
CCCTTCACTGCTAATTAAGA+AGG 0.422140 3_3:-70708919 Msa0469040:CDS
TGAATTGACTGCGGATTAAG+AGG 0.422788 3_3:+70713457 None:intergenic
TGATTCACCATCATGATCTT+CGG 0.432423 3_3:+70708659 None:intergenic
CCAGAGGATCAAGGAACTAA+AGG 0.433159 3_3:-70708316 Msa0469040:intron
AGCTTCTCGTTGATTGCAGT+TGG 0.434838 3_3:+70707219 None:intergenic
TATGTTTAGGCTATCACTGT+TGG 0.451491 3_3:-70709507 Msa0469040:intron
AACAAGGGCTCAACTGCATC+AGG 0.452014 3_3:+70709669 None:intergenic
CGGTATTATCACTGCCTAGC+TGG 0.453796 3_3:+70708700 None:intergenic
AAATGAGCAGGAAGATGATC+AGG 0.456808 3_3:-70708748 Msa0469040:CDS
CAGCTGCTGATTCAAGTCTC+CGG 0.457694 3_3:-70708419 Msa0469040:CDS
AGGATAAAACAGCAGCGGTC+TGG 0.462249 3_3:-70707370 Msa0469040:CDS
ATTGTTGTTGGAAGAGTTCA+AGG 0.462630 3_3:+70713427 None:intergenic
TTTATGGAGCTTCAAACGTT+AGG 0.463249 3_3:-70713056 Msa0469040:CDS
ATTTGTAACATCTCGTTGAT+GGG 0.464321 3_3:+70709887 None:intergenic
GAAAATTACGCCAATGAACT+AGG 0.464720 3_3:+70707089 None:intergenic
TTCTTTCTCTTTGCAACTAA+CGG 0.465469 3_3:+70707418 None:intergenic
AAAAGGAGGTGAGGTGAGAG+AGG 0.467153 3_3:+70713325 None:intergenic
GGTCTTGCCTTGGGGTCAGT+AGG 0.471014 3_3:+70708885 None:intergenic
AAACCTGTGGATCTTTAAGA+TGG 0.472028 3_3:+70710370 None:intergenic
CGGGCTTTGAAGAAGTTGGC+AGG 0.472242 3_3:-70708399 Msa0469040:CDS
GGTGGGGTCGTTGGAGATGC+CGG 0.472718 3_3:+70713380 None:intergenic
CTGTTGGAATAAATGCAGTC+AGG 0.474637 3_3:-70709491 Msa0469040:CDS
TCGCGGCATGGCTCTGGTGG+TGG 0.475743 3_3:+70713580 None:intergenic
ACTGCGGATTAAGAGGAGTT+CGG 0.476230 3_3:+70713464 None:intergenic
TGCTAGCTGATGTACCTTGG+TGG 0.479650 3_3:+70710496 None:intergenic
GCAAGATCTTTGGCGACGGT+GGG 0.479776 3_3:+70713363 None:intergenic
TCCTTCTTAATTAGCAGTGA+AGG 0.480554 3_3:+70708918 None:intergenic
TCACAAGCGCCCTCTTTGCC+CGG 0.481814 3_3:+70712691 None:intergenic
AGCTGCTGATTCAAGTCTCC+GGG 0.485711 3_3:-70708418 Msa0469040:CDS
GCAACTCAGCGAGTTTGTTA+GGG 0.486274 3_3:+70713280 None:intergenic
GGATATATTTCTGAAGATAA+GGG 0.490544 3_3:+70709997 None:intergenic
AAACAAACCTTGACGATGGA+TGG 0.491961 3_3:+70712595 None:intergenic
GTTCGGATTCGTAGCCTTCA+GGG 0.495722 3_3:+70713481 None:intergenic
AAACCTAGTTGATCAGAGCT+TGG 0.498249 3_3:+70708145 None:intergenic
ACGTATGAACCAAAAGCATA+AGG 0.500516 3_3:-70712982 Msa0469040:CDS
AAGTGATAGCTCGAACAATT+GGG 0.501384 3_3:-70710049 Msa0469040:CDS
TTTGGCGACGGTGGGGTCGT+TGG 0.501512 3_3:+70713371 None:intergenic
TGGGGTCAGTAGGCCTCCCT+CGG 0.502050 3_3:+70708895 None:intergenic
GGATGAAGACCGGGCAAAGA+GGG 0.502850 3_3:-70712700 Msa0469040:CDS
AGGTTGGCAATGGTTAGAGC+AGG 0.507284 3_3:-70707947 Msa0469040:CDS
TCTCCGGGCTTTGAAGAAGT+TGG 0.508552 3_3:-70708403 Msa0469040:CDS
GAAATGCAATGAGCGATTTG+AGG 0.509530 3_3:-70710226 Msa0469040:intron
AGTTCATGGCGGATTGTTGT+TGG 0.511020 3_3:+70713415 None:intergenic
TATAAGAAGTCACATGAGAA+AGG 0.511774 3_3:-70709086 Msa0469040:CDS
GGCAAGATCTTTGGCGACGG+TGG 0.512528 3_3:+70713362 None:intergenic
GGAAATGGAAGTGAAGTTCA+TGG 0.515511 3_3:+70713401 None:intergenic
CTGCCAACTTCTTCAAAGCC+CGG 0.516353 3_3:+70708400 None:intergenic
TTATCTTCAGAAATATATCC+AGG 0.516944 3_3:-70709994 Msa0469040:intron
CCGTCGCGGCATGGCTCTGG+TGG 0.517615 3_3:+70713577 None:intergenic
GTTGGCTTAACATAAAATAG+AGG 0.517664 3_3:+70707237 None:intergenic
ATTTACAATTTGTTTAAACA+AGG 0.521288 3_3:+70709653 None:intergenic
CAGTGAAGAGGCTGATGAAG+AGG 0.523376 3_3:-70708565 Msa0469040:CDS
TATTGATGATGATGTTGAGC+AGG 0.523614 3_3:-70708802 Msa0469040:CDS
GTTTGACAGCCGCTCGAGCA+TGG 0.525793 3_3:+70707903 None:intergenic
GCTTAACAAGGAGGAGAGGT+TGG 0.526219 3_3:-70707963 Msa0469040:CDS
AAGCCTTTGGTCTTGCCTTG+GGG 0.527111 3_3:+70708877 None:intergenic
CTTAACATAAAATAGAGGTC+CGG 0.528152 3_3:+70707242 None:intergenic
ACCTCAAGTTATTCTTAGAA+GGG 0.528603 3_3:-70712384 Msa0469040:CDS
TGGTCTAAGTAACAAGCAAA+AGG 0.529533 3_3:-70707458 Msa0469040:CDS
GATCCTCTGGAAGTCTGCAT+TGG 0.533194 3_3:+70708329 None:intergenic
CAATATGCAGTACCATATCA+TGG 0.533875 3_3:+70709838 None:intergenic
GAAATGCCTCCGTCGCGGCA+TGG 0.534644 3_3:+70713568 None:intergenic
TACAAATTTGATTGCAGCAG+CGG 0.536492 3_3:-70709871 Msa0469040:CDS
CTTCCTTCCATCCATCGTCA+AGG 0.537262 3_3:-70712602 Msa0469040:intron
AGAACTGCATTAGCGCAGCA+CGG 0.538011 3_3:-70708196 Msa0469040:CDS
TCATCTTTGATTGAAGTGCT+GGG 0.538336 3_3:+70713511 None:intergenic
AGGCTGATGAAGAGGATGGT+GGG 0.545198 3_3:-70708557 Msa0469040:CDS
CCACCAGAGCCATGCCGCGA+CGG 0.547880 3_3:-70713577 Msa0469040:CDS
TGCAGACTTCCAGAGGATCA+AGG 0.553115 3_3:-70708325 Msa0469040:CDS
ACGGAGGCATTTCTCCCCTC+CGG 0.553911 3_3:-70713558 Msa0469040:CDS
ATTCCAAGCTCTGATCAACT+AGG 0.555451 3_3:-70708148 Msa0469040:CDS
AGTTATTCTTAGAAGGGAGA+CGG 0.556840 3_3:-70712378 Msa0469040:CDS
CAACCATCTTAAAGATCCAC+AGG 0.558634 3_3:-70710373 Msa0469040:intron
AGAGCAGGGAGGGAGGAAAG+AGG 0.560920 3_3:-70707932 Msa0469040:CDS
GCCCTGCCAGAAAATGAAGA+TGG 0.561534 3_3:-70708360 Msa0469040:CDS
ATCTGCAACAACTCAGCACC+AGG 0.561871 3_3:+70708825 None:intergenic
ATAGGGCAAGGTCTTGAAGT+AGG 0.562189 3_3:+70709108 None:intergenic
CAAGAACTAAGATAGAGAAA+AGG 0.563545 3_3:-70707390 Msa0469040:CDS
GAACTGCATTAGCGCAGCAC+GGG 0.565852 3_3:-70708195 Msa0469040:CDS
CTAGGTTTAAAGCGAGTGGA+TGG 0.570555 3_3:-70708130 Msa0469040:CDS
TTGTTGGAAGAGTTCAAGGG+AGG 0.570603 3_3:+70713431 None:intergenic
CCTTCTTAATTAGCAGTGAA+GGG 0.572476 3_3:+70708919 None:intergenic
AATAGCAAGAGGATGAAGAC+CGG 0.575025 3_3:-70712710 Msa0469040:intron
ATTATCAGCATCATCACCAC+TGG 0.575178 3_3:+70708602 None:intergenic
TATACTACTTGTTAATCGTG+AGG 0.577763 3_3:-70713199 Msa0469040:intron
AGTTCTCATTCTGATGATTG+CGG 0.578631 3_3:-70708777 Msa0469040:CDS
GGCAATGGTTAGAGCAGGGA+GGG 0.578720 3_3:-70707942 Msa0469040:CDS
AACAACGTGGGAGGAAAGCG+TGG 0.583188 3_3:-70707342 Msa0469040:CDS
GCTGAGGGTAAAAGGAGGTG+AGG 0.584102 3_3:+70713316 None:intergenic
AAAAGCTTAACAAGGAGGAG+AGG 0.586507 3_3:-70707967 Msa0469040:CDS
AAACCTTGACGATGGATGGA+AGG 0.587340 3_3:+70712599 None:intergenic
AGGATGAAGACCGGGCAAAG+AGG 0.587878 3_3:-70712701 Msa0469040:CDS
GATATGCCTGCGTATGCCAC+TGG 0.588647 3_3:-70709466 Msa0469040:intron
CAAGGAGGAGAGGTTGGCAA+TGG 0.589667 3_3:-70707957 Msa0469040:CDS
CAGCTAGGCAGTGATAATAC+CGG 0.590821 3_3:-70708699 Msa0469040:CDS
CCAGAGCCATGCCGCGACGG+AGG 0.592746 3_3:-70713574 Msa0469040:CDS
GTGACTTCTTATATAGGGCA+AGG 0.593175 3_3:+70709096 None:intergenic
GAGGCTGATGAAGAGGATGG+TGG 0.593619 3_3:-70708558 Msa0469040:CDS
TGTTGGAATAAATGCAGTCA+GGG 0.594175 3_3:-70709490 Msa0469040:CDS
TTGCGGTTCAGAAAATGAGC+AGG 0.597937 3_3:-70708760 Msa0469040:CDS
TTTCCAATGCAGACTTCCAG+AGG 0.598028 3_3:-70708332 Msa0469040:CDS
TTTACAATTTGTTTAAACAA+GGG 0.598053 3_3:+70709654 None:intergenic
AATGGTTAGAGCAGGGAGGG+AGG 0.598243 3_3:-70707939 Msa0469040:CDS
ATTTCGGAACATGAAGGAGA+TGG 0.601769 3_3:-70708534 Msa0469040:CDS
GGTGGGATTTCGGAACATGA+AGG 0.604100 3_3:-70708540 Msa0469040:CDS
TCAACTAGGTTTAAAGCGAG+TGG 0.604947 3_3:-70708134 Msa0469040:CDS
CAAGATCTTTGGCGACGGTG+GGG 0.605254 3_3:+70713364 None:intergenic
ATCGGCAAGATCTTTGGCGA+CGG 0.608165 3_3:+70713359 None:intergenic
AGAGCTACTTACTTCAAGCA+TGG 0.609650 3_3:+70708105 None:intergenic
GGAATTCAGAGAGGTGCTGA+GGG 0.610468 3_3:+70713301 None:intergenic
GTTAGTTGCAAAGAGAAAGA+AGG 0.613009 3_3:-70707416 Msa0469040:CDS
GGGAATTCAGAGAGGTGCTG+AGG 0.616172 3_3:+70713300 None:intergenic
AGGGAGGCCTACTGACCCCA+AGG 0.616449 3_3:-70708892 Msa0469040:CDS
TTTGTAACATCTCGTTGATG+GGG 0.624366 3_3:+70709888 None:intergenic
GGGCTTTGAAGAAGTTGGCA+GGG 0.625113 3_3:-70708398 Msa0469040:CDS
TATGTGAGCTTCACAAGAGA+CGG 0.625829 3_3:-70712665 Msa0469040:CDS
AAATCGTTACGAAGTCCAGA+AGG 0.627630 3_3:+70713234 None:intergenic
AAAGAATGTTCTGAAGTGCA+CGG 0.632826 3_3:+70712946 None:intergenic
TACTTACCAGTGGCATACGC+AGG 0.634401 3_3:+70709460 None:intergenic
AGCTTCACAAGAGACGGACA+TGG 0.637224 3_3:-70712659 Msa0469040:CDS
TCTGCATATTCTTGGAAGTG+TGG 0.637853 3_3:-70708508 Msa0469040:CDS
AAGAGCGCGGATCATCTGAA+AGG 0.638139 3_3:-70710422 Msa0469040:CDS
TGACCCCAAGGCAAGACCAA+AGG 0.640319 3_3:-70708880 Msa0469040:CDS
ATAGCAAGAGGATGAAGACC+GGG 0.645784 3_3:-70712709 Msa0469040:intron
GATTTGATTCTGCATTCCAG+AGG 0.646076 3_3:-70707130 Msa0469040:three_prime_UTR
ACATGACCGCTCACGTCCAG+AGG 0.646176 3_3:-70709622 Msa0469040:intron
TCTTTGATTGAAGTGCTGGG+AGG 0.647190 3_3:+70713514 None:intergenic
TCTGACGATGACAACCAGCT+AGG 0.648692 3_3:-70708714 Msa0469040:CDS
TGCTAATTAAGAAGGACCGA+GGG 0.650296 3_3:-70708911 Msa0469040:CDS
TGATCTAGAAGACAGTGAAG+AGG 0.650869 3_3:-70708577 Msa0469040:CDS
GGTTGGCAATGGTTAGAGCA+GGG 0.652549 3_3:-70707946 Msa0469040:CDS
GAAGTTGGCAGGGACAACAA+TGG 0.655026 3_3:-70708388 Msa0469040:CDS
CTGCTAATTAAGAAGGACCG+AGG 0.659236 3_3:-70708912 Msa0469040:CDS
AGGACAGTACCATGCTCGAG+CGG 0.659615 3_3:-70707912 Msa0469040:CDS
TTGTTGTTGGAAGAGTTCAA+GGG 0.662039 3_3:+70713428 None:intergenic
CTGGTAAACAACAACGTGGG+AGG 0.662104 3_3:-70707351 Msa0469040:CDS
AAGATGAAATGCGACCCTGA+AGG 0.662503 3_3:-70713495 Msa0469040:CDS
TAATTAAGAAGGACCGAGGG+AGG 0.664397 3_3:-70708908 Msa0469040:CDS
TGGCAATGGTTAGAGCAGGG+AGG 0.665731 3_3:-70707943 Msa0469040:CDS
AGAAAAGGATAAAACAGCAG+CGG 0.669573 3_3:-70707375 Msa0469040:CDS
AAGGGCTCAACTGCATCAGG+AGG 0.671557 3_3:+70709672 None:intergenic
TTATGGAGAAGTCAATGTTG+CGG 0.672631 3_3:-70708856 Msa0469040:CDS
AGTTGCAAAGAGAAAGAAGG+TGG 0.672753 3_3:-70707413 Msa0469040:CDS
GGGGAGAAATGCCTCCGTCG+CGG 0.674537 3_3:+70713563 None:intergenic
TAAAGACCTCTGGACGTGAG+CGG 0.676998 3_3:+70709616 None:intergenic
TGATGATGAAAGCAGTGACG+AGG 0.678657 3_3:-70712420 Msa0469040:CDS
TCTCATTACATTATTCCGAG+AGG 0.680546 3_3:-70709042 Msa0469040:intron
GTTTGTTAGGGAATTCAGAG+AGG 0.681328 3_3:+70713292 None:intergenic
GGGAGGAATTGAATTGACTG+CGG 0.685428 3_3:+70713448 None:intergenic
CGGTCTGGTAAACAACAACG+TGG 0.692778 3_3:-70707355 Msa0469040:CDS
GGATCTTTAAGATGGTTGAG+TGG 0.692797 3_3:+70710378 None:intergenic
GAAGAGGCTGATGAAGAGGA+TGG 0.693614 3_3:-70708561 Msa0469040:CDS
TCCCTTCTAAGAATAACTTG+AGG 0.695578 3_3:+70712383 None:intergenic
AGTTCTGATTACGAAACCAG+TGG 0.696679 3_3:-70708618 Msa0469040:CDS
GATGAAGCCGAAGATCATGA+TGG 0.710456 3_3:-70708666 Msa0469040:CDS
GAGGTGCTGAGGGTAAAAGG+AGG 0.711938 3_3:+70713311 None:intergenic
GGTCTGGTAAACAACAACGT+GGG 0.766215 3_3:-70707354 Msa0469040:CDS
AATGGAAGTGAAGTTCATGG+CGG 0.785076 3_3:+70713404 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATTTGAAGAAATAATT+TGG - chr3_3:70709083-70709102 Msa0469040:CDS 10.0%
!! TATATTTGAAGAAATAATTT+GGG - chr3_3:70709084-70709103 Msa0469040:CDS 10.0%
!! ATATTTGAAGAAATAATTTG+GGG - chr3_3:70709085-70709104 Msa0469040:CDS 15.0%
!!! GTTTTCATATACAATAATAT+AGG + chr3_3:70710526-70710545 None:intergenic 15.0%
!!! TTTACAATTTGTTTAAACAA+GGG + chr3_3:70711046-70711065 None:intergenic 15.0%
!!! ATTTACAATTTGTTTAAACA+AGG + chr3_3:70711047-70711066 None:intergenic 15.0%
!!! ATTTGTTTACTTTTATTCAT+AGG - chr3_3:70712464-70712483 Msa0469040:CDS 15.0%
!!! ATATTTTTAAAAATGAGCAA+GGG + chr3_3:70712840-70712859 None:intergenic 15.0%
!!! AATATTTTTAAAAATGAGCA+AGG + chr3_3:70712841-70712860 None:intergenic 15.0%
!! TTTATAGAATTTCTTTAGAT+TGG - chr3_3:70713545-70713564 Msa0469040:CDS 15.0%
!!! TTTTTTTCTTTTGTTCACTT+TGG - chr3_3:70708122-70708141 Msa0469040:CDS 20.0%
!! ATTTACGAACAAAAGATATT+TGG + chr3_3:70708616-70708635 None:intergenic 20.0%
!!! TTCTTTTCTTCTAACTTATA+AGG + chr3_3:70708805-70708824 None:intergenic 20.0%
!! TTTAATTAACAAGAAATGCT+TGG - chr3_3:70709815-70709834 Msa0469040:intron 20.0%
!!! AATCACACTTTCAAAATTTT+AGG - chr3_3:70710607-70710626 Msa0469040:intron 20.0%
!! AAAAGTTTAACAACATTAAC+TGG + chr3_3:70710679-70710698 None:intergenic 20.0%
!! TAGTTAAATTTGGTAAACTT+TGG - chr3_3:70710732-70710751 Msa0469040:intron 20.0%
!!! TTAATTGTCTTATGCATTTT+TGG - chr3_3:70712884-70712903 Msa0469040:intron 20.0%
!! AAAAAAATACACATCCATAT+TGG + chr3_3:70713202-70713221 None:intergenic 20.0%
!!! TTTTTTTTGTATTGAACAGA+CGG - chr3_3:70713215-70713234 Msa0469040:CDS 20.0%
! GGAAATGGAAATTTGTATAT+TGG - chr3_3:70707556-70707575 Msa0469040:intron 25.0%
!!! TTTCATTTTTTTGTTGTGTG+TGG - chr3_3:70707579-70707598 Msa0469040:intron 25.0%
!!! ACGTTGTTTGGTTTTTTTAT+AGG - chr3_3:70707804-70707823 Msa0469040:intron 25.0%
! TGTAAAATTTGAATAGCAAG+AGG - chr3_3:70707976-70707995 Msa0469040:CDS 25.0%
!!! ATATTGGCATTGATTATCTA+AGG - chr3_3:70708484-70708503 Msa0469040:CDS 25.0%
! TATATTTAGAAGTTCAGAAG+AGG - chr3_3:70708508-70708527 Msa0469040:CDS 25.0%
! ATATTTAGAAGTTCAGAAGA+GGG - chr3_3:70708509-70708528 Msa0469040:CDS 25.0%
! ATTTAAACTTGAAATGCCAT+TGG + chr3_3:70708671-70708690 None:intergenic 25.0%
!! CAAGTTAGCTAAAATTTTCA+AGG - chr3_3:70708982-70709001 Msa0469040:intron 25.0%
! TTGCTTATTTGCTCATTTAA+GGG + chr3_3:70709023-70709042 None:intergenic 25.0%
!!! TTCATAGAAGCTTTAGAATT+AGG - chr3_3:70709057-70709076 Msa0469040:CDS 25.0%
! TGATGTGGTATTATATCATT+TGG - chr3_3:70709144-70709163 Msa0469040:intron 25.0%
! GATGTGGTATTATATCATTT+GGG - chr3_3:70709145-70709164 Msa0469040:intron 25.0%
! TTATATCATTTGGGTAGTAT+AGG - chr3_3:70709154-70709173 Msa0469040:intron 25.0%
! TATATCATTTGGGTAGTATA+GGG - chr3_3:70709155-70709174 Msa0469040:intron 25.0%
! ATGTTAACATTCAACTCAAA+TGG + chr3_3:70709295-70709314 None:intergenic 25.0%
! AATTTACGTTCTATTCACTT+AGG - chr3_3:70709326-70709345 Msa0469040:intron 25.0%
! AATACAAAATCCTCCTAATT+TGG - chr3_3:70709453-70709472 Msa0469040:intron 25.0%
! ATACAAAATCCTCCTAATTT+GGG - chr3_3:70709454-70709473 Msa0469040:intron 25.0%
! AACTTAGTTATCAGTAATCA+TGG - chr3_3:70710152-70710171 Msa0469040:intron 25.0%
! ACTTAGTTATCAGTAATCAT+GGG - chr3_3:70710153-70710172 Msa0469040:intron 25.0%
!! GGTCATTCTTACAAAATTTT+AGG - chr3_3:70710174-70710193 Msa0469040:intron 25.0%
! CTAGCAAAAAGAAAAAGAAA+AGG - chr3_3:70710218-70710237 Msa0469040:intron 25.0%
!! TTTTCATGTTACGTATTATG+CGG + chr3_3:70710252-70710271 None:intergenic 25.0%
! TACAAAAATTTACAAACCTG+TGG + chr3_3:70710343-70710362 None:intergenic 25.0%
! AATCATTGGAAGATTTCAAA+AGG + chr3_3:70710557-70710576 None:intergenic 25.0%
! ATTGTACAAACCAGTAAATA+TGG + chr3_3:70710590-70710609 None:intergenic 25.0%
!! GGATATATTTCTGAAGATAA+GGG + chr3_3:70710703-70710722 None:intergenic 25.0%
!! TGGATATATTTCTGAAGATA+AGG + chr3_3:70710704-70710723 None:intergenic 25.0%
! TTATCTTCAGAAATATATCC+AGG - chr3_3:70710703-70710722 Msa0469040:intron 25.0%
! CAAATTTAACTAAAGATACC+TGG + chr3_3:70710724-70710743 None:intergenic 25.0%
! CAGGTATCTTTAGTTAAATT+TGG - chr3_3:70710722-70710741 Msa0469040:intron 25.0%
! TTTGTATCCTATTTCATTCA+AGG - chr3_3:70710981-70711000 Msa0469040:intron 25.0%
! AATAACACCTTGAATGAAAT+AGG + chr3_3:70710991-70711010 None:intergenic 25.0%
!!! TTCATTCAAGGTGTTATTTT+TGG - chr3_3:70710993-70711012 Msa0469040:intron 25.0%
! CACAATCAAAATATCAACAT+AGG + chr3_3:70711547-70711566 None:intergenic 25.0%
!!! CTATGTTGATATTTTGATTG+TGG - chr3_3:70711545-70711564 Msa0469040:intron 25.0%
!!! ATTTTAGCTTACTGAATAAG+AGG + chr3_3:70712415-70712434 None:intergenic 25.0%
! TGTAAAGAAAAAGCTTAACA+AGG - chr3_3:70712722-70712741 Msa0469040:intron 25.0%
!! AATTCTAGATGTCATGTTTT+GGG + chr3_3:70712927-70712946 None:intergenic 25.0%
!! AAATTCTAGATGTCATGTTT+TGG + chr3_3:70712928-70712947 None:intergenic 25.0%
! TGTTATATTTGGAGAATCAT+TGG + chr3_3:70712960-70712979 None:intergenic 25.0%
!!! TTTTTTTGTATTGAACAGAC+GGG - chr3_3:70713216-70713235 Msa0469040:CDS 25.0%
!!! AGAATGTACCATTTTTTTTC+CGG - chr3_3:70713436-70713455 Msa0469040:CDS 25.0%
! AAGAAATAAATTTCTTCCTC+TGG + chr3_3:70713586-70713605 None:intergenic 25.0%
!! TATTTCTTTTCCTAGTTCAT+TGG - chr3_3:70713598-70713617 Msa0469040:exon 25.0%
! TATACTACTTGTTAATCGTG+AGG - chr3_3:70707498-70707517 Msa0469040:intron 30.0%
AGATACACTTTCGTTGTTTA+TGG - chr3_3:70707625-70707644 Msa0469040:intron 30.0%
! GATTGTGTTTTGTGTTTGTT+TGG - chr3_3:70707826-70707845 Msa0469040:intron 30.0%
!!! ATGCTTGTTTGTGTTTTTTC+TGG - chr3_3:70707868-70707887 Msa0469040:intron 30.0%
CTAACTTAGAATTGTGTGTT+TGG + chr3_3:70707946-70707965 None:intergenic 30.0%
CACAATTCTAAGTTAGTGAA+TGG - chr3_3:70707950-70707969 Msa0469040:CDS 30.0%
AAAAAAACAAACCTTGACGA+TGG + chr3_3:70708109-70708128 None:intergenic 30.0%
AAGAATAACTTGAGGTGATT+CGG + chr3_3:70708309-70708328 None:intergenic 30.0%
ACCTCAAGTTATTCTTAGAA+GGG - chr3_3:70708313-70708332 Msa0469040:intron 30.0%
! TACTCTGTTTGAGTTTAGAA+AGG + chr3_3:70708441-70708460 None:intergenic 30.0%
!! TAAGTTGATATGCACGATAT+TGG - chr3_3:70708468-70708487 Msa0469040:CDS 30.0%
TGGCACTTCCAAAAAAATAA+GGG + chr3_3:70708651-70708670 None:intergenic 30.0%
TTGGCACTTCCAAAAAAATA+AGG + chr3_3:70708652-70708671 None:intergenic 30.0%
!!! TATTTTTTTGGAAGTGCCAA+TGG - chr3_3:70708652-70708671 Msa0469040:CDS 30.0%
TTATTTATGAACTTGCGTAG+TGG + chr3_3:70708717-70708736 None:intergenic 30.0%
AAGAAAAGAATTCAGATCGA+AGG - chr3_3:70708815-70708834 Msa0469040:CDS 30.0%
TGCATGTGCAAAGTTAAATA+TGG + chr3_3:70708861-70708880 None:intergenic 30.0%
! TATTTAACTTTGCACATGCA+TGG - chr3_3:70708861-70708880 Msa0469040:CDS 30.0%
GCTATGTATTCTATTTACCA+AGG + chr3_3:70708930-70708949 None:intergenic 30.0%
CTTGCTTATTTGCTCATTTA+AGG + chr3_3:70709024-70709043 None:intergenic 30.0%
GTGATTAATATCGAATGATG+TGG - chr3_3:70709129-70709148 Msa0469040:intron 30.0%
ATATCATTTGGGTAGTATAG+GGG - chr3_3:70709156-70709175 Msa0469040:intron 30.0%
GATTAGATAGACAAGAAAAG+TGG - chr3_3:70709194-70709213 Msa0469040:intron 30.0%
!! ATAGCTTTGGAAAAAAAGGA+AGG - chr3_3:70709382-70709401 Msa0469040:intron 30.0%
TACAAAATCCTCCTAATTTG+GGG - chr3_3:70709455-70709474 Msa0469040:intron 30.0%
GAACTCAAAAATTGTATTGG+AGG - chr3_3:70709478-70709497 Msa0469040:CDS 30.0%
TTCAATCTCTGTATATGTGT+GGG + chr3_3:70709760-70709779 None:intergenic 30.0%
TAACAAGAAATGCTTGGTTA+TGG - chr3_3:70709821-70709840 Msa0469040:intron 30.0%
TCTAGTATGAAAGTCGAAAA+AGG + chr3_3:70709914-70709933 None:intergenic 30.0%
TCATATGAGATAAGGATGTT+AGG - chr3_3:70710003-70710022 Msa0469040:CDS 30.0%
CATAGAATCAAGATGTTGAT+TGG + chr3_3:70710409-70710428 None:intergenic 30.0%
TTGATTCTATGTGATCTACA+GGG - chr3_3:70710418-70710437 Msa0469040:CDS 30.0%
! ATAATATAGGCATGTTGCTT+TGG + chr3_3:70710513-70710532 None:intergenic 30.0%
ATGGAGTCTTCAATAATCAT+TGG + chr3_3:70710571-70710590 None:intergenic 30.0%
ATTGAAGACTCCATATTTAC+TGG - chr3_3:70710577-70710596 Msa0469040:intron 30.0%
ATTTGTAACATCTCGTTGAT+GGG + chr3_3:70710813-70710832 None:intergenic 30.0%
AATTTGTAACATCTCGTTGA+TGG + chr3_3:70710814-70710833 None:intergenic 30.0%
!!! ACCAGTTTTGTTTTTATCGT+TGG - chr3_3:70710894-70710913 Msa0469040:intron 30.0%
ACCAACGATAAAAACAAAAC+TGG + chr3_3:70710898-70710917 None:intergenic 30.0%
!!! AGTTTTGTTTTTATCGTTGG+TGG - chr3_3:70710897-70710916 Msa0469040:intron 30.0%
TATCATTTGATATAGTGCTG+CGG - chr3_3:70711116-70711135 Msa0469040:intron 30.0%
! TGAGTTTGGTTGATATGTTT+AGG - chr3_3:70711177-70711196 Msa0469040:intron 30.0%
AAAATTTCAGTACTTACCAG+TGG + chr3_3:70711250-70711269 None:intergenic 30.0%
!!! TGGTAAGTACTGAAATTTTC+CGG - chr3_3:70711251-70711270 Msa0469040:intron 30.0%
GCAAAATGCATATATTTCCA+AGG + chr3_3:70711278-70711297 None:intergenic 30.0%
ACTAATGAAAGAACACATGT+AGG + chr3_3:70711405-70711424 None:intergenic 30.0%
!!! CAGGATATAGTTTTAAGCAA+GGG + chr3_3:70711489-70711508 None:intergenic 30.0%
!!! ACAGGATATAGTTTTAAGCA+AGG + chr3_3:70711490-70711509 None:intergenic 30.0%
ATGAAGTTAACAGAAAACAC+AGG + chr3_3:70711508-70711527 None:intergenic 30.0%
AAAATATCAACATAGGACGA+AGG + chr3_3:70711540-70711559 None:intergenic 30.0%
CTCATGTGACTTCTTATATA+GGG + chr3_3:70711609-70711628 None:intergenic 30.0%
TCTCATGTGACTTCTTATAT+AGG + chr3_3:70711610-70711629 None:intergenic 30.0%
TATAAGAAGTCACATGAGAA+AGG - chr3_3:70711611-70711630 Msa0469040:intron 30.0%
CAAACAACATTAATCAAGTG+TGG + chr3_3:70711746-70711765 None:intergenic 30.0%
! GATTAATGTTGTTTGTTTGC+AGG - chr3_3:70711751-70711770 Msa0469040:intron 30.0%
TAAAAGACTCAGCAAAAAAG+AGG - chr3_3:70712227-70712246 Msa0469040:intron 30.0%
! AGAATTCCATCTTCATTTTC+TGG + chr3_3:70712346-70712365 None:intergenic 30.0%
CATGACAAAAAGAGAAAACA+CGG - chr3_3:70712657-70712676 Msa0469040:CDS 30.0%
ATGACAAAAAGAGAAAACAC+GGG - chr3_3:70712658-70712677 Msa0469040:CDS 30.0%
AAAGAAAAAGCTTAACAAGG+AGG - chr3_3:70712725-70712744 Msa0469040:intron 30.0%
ATTCTCCAAATATAACAGTG+TGG - chr3_3:70712963-70712982 Msa0469040:CDS 30.0%
TATTGCCACACTGTTATATT+TGG + chr3_3:70712971-70712990 None:intergenic 30.0%
! TGTGGTTCTGTTTATCAATT+TGG + chr3_3:70713028-70713047 None:intergenic 30.0%
!! TAACATTTTGATCAACTGAC+TGG + chr3_3:70713060-70713079 None:intergenic 30.0%
TTCTTTCTCTTTGCAACTAA+CGG + chr3_3:70713282-70713301 None:intergenic 30.0%
CAAGAACTAAGATAGAGAAA+AGG - chr3_3:70713307-70713326 Msa0469040:CDS 30.0%
CTTAACATAAAATAGAGGTC+CGG + chr3_3:70713458-70713477 None:intergenic 30.0%
! GTTGGCTTAACATAAAATAG+AGG + chr3_3:70713463-70713482 None:intergenic 30.0%
! TCATCTTTGATTGAAGTGCT+GGG + chr3_3:70707189-70707208 None:intergenic 35.0%
TTCATCTTTGATTGAAGTGC+TGG + chr3_3:70707190-70707209 None:intergenic 35.0%
! TTGTTGTTGGAAGAGTTCAA+GGG + chr3_3:70707272-70707291 None:intergenic 35.0%
! ATTGTTGTTGGAAGAGTTCA+AGG + chr3_3:70707273-70707292 None:intergenic 35.0%
ATGAACTTCACTTCCATTTC+CGG - chr3_3:70707298-70707317 Msa0469040:three_prime_UTR 35.0%
!! AGAGAGGAACATAGCTTTAT+CGG + chr3_3:70707359-70707378 None:intergenic 35.0%
!! TGTTGAGTTTGCTATGTGAT+TGG - chr3_3:70707535-70707554 Msa0469040:intron 35.0%
!! GTTTGCTATGTGATTGGAAA+TGG - chr3_3:70707541-70707560 Msa0469040:intron 35.0%
TTTATGGAGCTTCAAACGTT+AGG - chr3_3:70707641-70707660 Msa0469040:intron 35.0%
GTTAGGTGATAAAAAGCTGA+GGG - chr3_3:70707658-70707677 Msa0469040:intron 35.0%
! ACGTATGAACCAAAAGCATA+AGG - chr3_3:70707715-70707734 Msa0469040:intron 35.0%
!! AAAGAATGTTCTGAAGTGCA+CGG + chr3_3:70707754-70707773 None:intergenic 35.0%
! CATTCTTTTTGTCATGTTGC+AGG - chr3_3:70707766-70707785 Msa0469040:intron 35.0%
! GTCAATGTTTCTACGTTGTT+TGG - chr3_3:70707792-70707811 Msa0469040:intron 35.0%
TGCTTTCATCATCACTATCT+TGG + chr3_3:70708271-70708290 None:intergenic 35.0%
CACCTCAAGTTATTCTTAGA+AGG - chr3_3:70708312-70708331 Msa0469040:intron 35.0%
! TCCCTTCTAAGAATAACTTG+AGG + chr3_3:70708317-70708336 None:intergenic 35.0%
AGTTATTCTTAGAAGGGAGA+CGG - chr3_3:70708319-70708338 Msa0469040:CDS 35.0%
!! GAAATTTTGATGCAGCGAAA+AGG - chr3_3:70708543-70708562 Msa0469040:CDS 35.0%
TGCAACAAAGATCAGATCTA+CGG - chr3_3:70708737-70708756 Msa0469040:CDS 35.0%
! AAGAAATAATTTGGGGCTGA+GGG - chr3_3:70709092-70709111 Msa0469040:CDS 35.0%
GATATGACTTCAGATGAAGA+TGG + chr3_3:70709247-70709266 None:intergenic 35.0%
!! TTAGGCTTTGTTTGTGAGTT+TGG - chr3_3:70709344-70709363 Msa0469040:intron 35.0%
ACAAAATCCTCCTAATTTGG+GGG - chr3_3:70709456-70709475 Msa0469040:intron 35.0%
!!! TTTTTGAGTTCCCCCAAATT+AGG + chr3_3:70709469-70709488 None:intergenic 35.0%
GGGGAACTCAAAAATTGTAT+TGG - chr3_3:70709475-70709494 Msa0469040:CDS 35.0%
CTCAAAAATTGTATTGGAGG+AGG - chr3_3:70709481-70709500 Msa0469040:CDS 35.0%
! ATTGTATTGGAGGAGGATTT+TGG - chr3_3:70709488-70709507 Msa0469040:CDS 35.0%
TTAAATTGCGTTCTCTAGTC+CGG - chr3_3:70709731-70709750 Msa0469040:intron 35.0%
GTTCAATCTCTGTATATGTG+TGG + chr3_3:70709761-70709780 None:intergenic 35.0%
TGGCAAATATCACTTATACG+AGG - chr3_3:70709841-70709860 Msa0469040:intron 35.0%
GAGGAAAAAAAATGTCTGAC+AGG - chr3_3:70709860-70709879 Msa0469040:CDS 35.0%
AACTTGAAGCTAAGTTTGGA+GGG + chr3_3:70709963-70709982 None:intergenic 35.0%
AAGGAACTTGAAGCTAAGTT+TGG + chr3_3:70709967-70709986 None:intergenic 35.0%
AACTTGAAGCTAAGTTTGGA+TGG + chr3_3:70709963-70709982 None:intergenic 35.0%
AAGGAACTTGAAGCTAAGTT+TGG + chr3_3:70709967-70709986 None:intergenic 35.0%
AACATGAAAAAGAAAGAGCG+CGG - chr3_3:70710262-70710281 Msa0469040:intron 35.0%
! AAACCTGTGGATCTTTAAGA+TGG + chr3_3:70710330-70710349 None:intergenic 35.0%
CTTGATTCTATGTGATCTAC+AGG - chr3_3:70710417-70710436 Msa0469040:CDS 35.0%
AAAGTGATAGCTCGAACAAT+TGG - chr3_3:70710647-70710666 Msa0469040:intron 35.0%
AAGTGATAGCTCGAACAATT+GGG - chr3_3:70710648-70710667 Msa0469040:intron 35.0%
TTTGTAACATCTCGTTGATG+GGG + chr3_3:70710812-70710831 None:intergenic 35.0%
TACAAATTTGATTGCAGCAG+CGG - chr3_3:70710826-70710845 Msa0469040:intron 35.0%
CAATATGCAGTACCATATCA+TGG + chr3_3:70710862-70710881 None:intergenic 35.0%
!!! AAGGTGTTATTTTTGGATGC+AGG - chr3_3:70711000-70711019 Msa0469040:intron 35.0%
! TGCGGACTTTTTATTATGAC+AGG - chr3_3:70711134-70711153 Msa0469040:intron 35.0%
TATGTTTAGGCTATCACTGT+TGG - chr3_3:70711190-70711209 Msa0469040:intron 35.0%
TGTTGGAATAAATGCAGTCA+GGG - chr3_3:70711207-70711226 Msa0469040:intron 35.0%
ATGCATATATTTCCAAGGAC+CGG + chr3_3:70711273-70711292 None:intergenic 35.0%
TAGTTAAAACCAACCCTTGT+TGG + chr3_3:70711335-70711354 None:intergenic 35.0%
!!! AAGGGTTGGTTTTAACTAGT+AGG - chr3_3:70711337-70711356 Msa0469040:intron 35.0%
! CATACTGAACAAAGTACTCA+TGG + chr3_3:70711435-70711454 None:intergenic 35.0%
TCTCATTACATTATTCCGAG+AGG - chr3_3:70711655-70711674 Msa0469040:intron 35.0%
! ATTACCGTAACTCTTTTGTG+TGG - chr3_3:70711680-70711699 Msa0469040:intron 35.0%
! TTACCGTAACTCTTTTGTGT+GGG - chr3_3:70711681-70711700 Msa0469040:intron 35.0%
CCTTCTTAATTAGCAGTGAA+GGG + chr3_3:70711781-70711800 None:intergenic 35.0%
TCCTTCTTAATTAGCAGTGA+AGG + chr3_3:70711782-70711801 None:intergenic 35.0%
TTATGGAGAAGTCAATGTTG+CGG - chr3_3:70711841-70711860 Msa0469040:intron 35.0%
!! TATTGATGATGATGTTGAGC+AGG - chr3_3:70711895-70711914 Msa0469040:intron 35.0%
AGTTCTCATTCTGATGATTG+CGG - chr3_3:70711920-70711939 Msa0469040:intron 35.0%
TGATTCACCATCATGATCTT+CGG + chr3_3:70712041-70712060 None:intergenic 35.0%
! CGTGTTTTCTCTTTTTGTCA+TGG + chr3_3:70712659-70712678 None:intergenic 35.0%
TATTTATGTGTGCACCTTCT+AGG - chr3_3:70712695-70712714 Msa0469040:CDS 35.0%
TTTCTTTACATGAGCCTAGA+AGG + chr3_3:70712712-70712731 None:intergenic 35.0%
!! TTTGGAGAATCATTGGTTTG+TGG + chr3_3:70712953-70712972 None:intergenic 35.0%
!!! ACTGACTGGTTTTAATAGTG+TGG + chr3_3:70713046-70713065 None:intergenic 35.0%
GATTGCACTCTAATCCAATA+TGG - chr3_3:70713185-70713204 Msa0469040:intron 35.0%
TGGTCTAAGTAACAAGCAAA+AGG - chr3_3:70713239-70713258 Msa0469040:CDS 35.0%
GTTAGTTGCAAAGAGAAAGA+AGG - chr3_3:70713281-70713300 Msa0469040:CDS 35.0%
AGAAAAGGATAAAACAGCAG+CGG - chr3_3:70713322-70713341 Msa0469040:CDS 35.0%
ATAGAGGTCCGGAAAAAAAA+TGG + chr3_3:70713447-70713466 None:intergenic 35.0%
! TTTTCGGATTTTAGACCGGA+GGG + chr3_3:70707157-70707176 None:intergenic 40.0%
! GAGCTTTTCGGATTTTAGAC+CGG + chr3_3:70707161-70707180 None:intergenic 40.0%
! TGAATTGACTGCGGATTAAG+AGG + chr3_3:70707243-70707262 None:intergenic 40.0%
AATGGAAGTGAAGTTCATGG+CGG + chr3_3:70707296-70707315 None:intergenic 40.0%
GGAAATGGAAGTGAAGTTCA+TGG + chr3_3:70707299-70707318 None:intergenic 40.0%
! AGCTTTATCGGCAAGATCTT+TGG + chr3_3:70707347-70707366 None:intergenic 40.0%
! GTTTGTTAGGGAATTCAGAG+AGG + chr3_3:70707408-70707427 None:intergenic 40.0%
AAATCGTTACGAAGTCCAGA+AGG + chr3_3:70707466-70707485 None:intergenic 40.0%
CGTTAGGTGATAAAAAGCTG+AGG - chr3_3:70707657-70707676 Msa0469040:intron 40.0%
! TGGCTTCATCCTTATGCTTT+TGG + chr3_3:70707727-70707746 None:intergenic 40.0%
AATAGCAAGAGGATGAAGAC+CGG - chr3_3:70707987-70708006 Msa0469040:intron 40.0%
TATGTGAGCTTCACAAGAGA+CGG - chr3_3:70708032-70708051 Msa0469040:intron 40.0%
AAACAAACCTTGACGATGGA+TGG + chr3_3:70708105-70708124 None:intergenic 40.0%
TAGAAGGGAGACGGTTTATA+AGG - chr3_3:70708328-70708347 Msa0469040:CDS 40.0%
TTTAGAAGTTCAGAAGAGGG+TGG - chr3_3:70708512-70708531 Msa0469040:CDS 40.0%
TTAGAAGTTCAGAAGAGGGT+GGG - chr3_3:70708513-70708532 Msa0469040:CDS 40.0%
!!! GAGTCGAGCCCTTATTTTTT+TGG - chr3_3:70708640-70708659 Msa0469040:CDS 40.0%
TTGAGCATGCTTTAACACCT+TGG - chr3_3:70708910-70708929 Msa0469040:CDS 40.0%
GCTTCTATGAATGCTAACTC+AGG + chr3_3:70709048-70709067 None:intergenic 40.0%
! GAAGAAATAATTTGGGGCTG+AGG - chr3_3:70709091-70709110 Msa0469040:CDS 40.0%
!! AGAAAAGTGGACTGTTCTTG+AGG - chr3_3:70709207-70709226 Msa0469040:intron 40.0%
!! GAAAAGTGGACTGTTCTTGA+GGG - chr3_3:70709208-70709227 Msa0469040:intron 40.0%
!! AAAAGTGGACTGTTCTTGAG+GGG - chr3_3:70709209-70709228 Msa0469040:intron 40.0%
!! GCTTTGTTTGTGAGTTTGGA+GGG - chr3_3:70709348-70709367 Msa0469040:intron 40.0%
!! GGGGATAGCTTTGGAAAAAA+AGG - chr3_3:70709378-70709397 Msa0469040:intron 40.0%
GAAAAAAAGGAAGGAGCAGA+TGG - chr3_3:70709391-70709410 Msa0469040:intron 40.0%
! TATTGGAGGAGGATTTTGGA+GGG - chr3_3:70709492-70709511 Msa0469040:CDS 40.0%
GTGGGAAATATAGGGGAAAT+TGG + chr3_3:70709644-70709663 None:intergenic 40.0%
TTTGGGAGGTGGGAAATATA+GGG + chr3_3:70709652-70709671 None:intergenic 40.0%
TCTGTATATGTGTGGGATAC+CGG + chr3_3:70709753-70709772 None:intergenic 40.0%
GAGATTGAACTCAATAGTGC+AGG - chr3_3:70709771-70709790 Msa0469040:intron 40.0%
GGAAGAGAATTCAGCTCAAA+TGG - chr3_3:70709881-70709900 Msa0469040:CDS 40.0%
GAACTTGAAGCTAAGTTTGG+AGG + chr3_3:70709964-70709983 None:intergenic 40.0%
GCACTCGTTCATATGAGATA+AGG - chr3_3:70709995-70710014 Msa0469040:CDS 40.0%
TGAAGCTAAGTTTGGATGGA+GGG + chr3_3:70710036-70710055 None:intergenic 40.0%
TTGAAGCTAAGTTTGGATGG+AGG + chr3_3:70710037-70710056 None:intergenic 40.0%
CATCCTTATCTCCTATGAAC+GGG + chr3_3:70710078-70710097 None:intergenic 40.0%
GCATCCTTATCTCCTATGAA+CGG + chr3_3:70710079-70710098 None:intergenic 40.0%
TCATAGGAGATAAGGATGCT+AGG - chr3_3:70710080-70710099 Msa0469040:intron 40.0%
! AAATTTTAGGCAAGCCACCA+AGG - chr3_3:70710187-70710206 Msa0469040:intron 40.0%
! TTTTGCTAGCTGATGTACCT+TGG + chr3_3:70710207-70710226 None:intergenic 40.0%
!! GGATCTTTAAGATGGTTGAG+TGG + chr3_3:70710322-70710341 None:intergenic 40.0%
CAACCATCTTAAAGATCCAC+AGG - chr3_3:70710324-70710343 Msa0469040:intron 40.0%
GGATAGAGCAAAATGCAAAC+AGG + chr3_3:70710388-70710407 None:intergenic 40.0%
! ATGTGATCTACAGGGTTTTG+TGG - chr3_3:70710426-70710445 Msa0469040:CDS 40.0%
GAAATGCAATGAGCGATTTG+AGG - chr3_3:70710471-70710490 Msa0469040:CDS 40.0%
! CTTTGATTGGCTGATGAGTT+TGG - chr3_3:70711163-70711182 Msa0469040:intron 40.0%
CTGTTGGAATAAATGCAGTC+AGG - chr3_3:70711206-70711225 Msa0469040:intron 40.0%
! TACTGAAATTTTCCGGTCCT+TGG - chr3_3:70711258-70711277 Msa0469040:intron 40.0%
TATATCTTGCGCATCCAACA+AGG - chr3_3:70711318-70711337 Msa0469040:intron 40.0%
ATATCTTGCGCATCCAACAA+GGG - chr3_3:70711319-70711338 Msa0469040:intron 40.0%
ACTAAGCTGACTAAAAGTCC+TGG - chr3_3:70711365-70711384 Msa0469040:intron 40.0%
TAGGAATCAAACTCAAGACC+AGG + chr3_3:70711386-70711405 None:intergenic 40.0%
TATCAACATAGGACGAAGGA+AGG + chr3_3:70711536-70711555 None:intergenic 40.0%
GTGACTTCTTATATAGGGCA+AGG + chr3_3:70711604-70711623 None:intergenic 40.0%
GAGTTACGGTAATTACCTCT+CGG + chr3_3:70711673-70711692 None:intergenic 40.0%
! TACCGTAACTCTTTTGTGTG+GGG - chr3_3:70711682-70711701 Msa0469040:intron 40.0%
CCCTTCACTGCTAATTAAGA+AGG - chr3_3:70711778-70711797 Msa0469040:intron 40.0%
TGCTAATTAAGAAGGACCGA+GGG - chr3_3:70711786-70711805 Msa0469040:intron 40.0%
TTGACTTCTCCATAAGCCTT+TGG + chr3_3:70711836-70711855 None:intergenic 40.0%
AAATGAGCAGGAAGATGATC+AGG - chr3_3:70711949-70711968 Msa0469040:intron 40.0%
! AGTTCTGATTACGAAACCAG+TGG - chr3_3:70712079-70712098 Msa0469040:intron 40.0%
ATTATCAGCATCATCACCAC+TGG + chr3_3:70712098-70712117 None:intergenic 40.0%
TGATCTAGAAGACAGTGAAG+AGG - chr3_3:70712120-70712139 Msa0469040:intron 40.0%
ATTTCGGAACATGAAGGAGA+TGG - chr3_3:70712163-70712182 Msa0469040:intron 40.0%
GATGGTGATCTGCATATTCT+TGG - chr3_3:70712181-70712200 Msa0469040:intron 40.0%
TCTGCATATTCTTGGAAGTG+TGG - chr3_3:70712189-70712208 Msa0469040:intron 40.0%
!! TCCATCTTCATTTTCTGGCA+GGG + chr3_3:70712341-70712360 None:intergenic 40.0%
!! TTCCATCTTCATTTTCTGGC+AGG + chr3_3:70712342-70712361 None:intergenic 40.0%
! TGCAGTTCTTGCTTCGTTTT+TGG + chr3_3:70712490-70712509 None:intergenic 40.0%
! ATTCCAAGCTCTGATCAACT+AGG - chr3_3:70712549-70712568 Msa0469040:intron 40.0%
AAACCTAGTTGATCAGAGCT+TGG + chr3_3:70712555-70712574 None:intergenic 40.0%
! TCAACTAGGTTTAAAGCGAG+TGG - chr3_3:70712563-70712582 Msa0469040:intron 40.0%
AGAGCTACTTACTTCAAGCA+TGG + chr3_3:70712595-70712614 None:intergenic 40.0%
AAAAGCTTAACAAGGAGGAG+AGG - chr3_3:70712730-70712749 Msa0469040:intron 40.0%
! TTTTGTATTGAACAGACGGG+TGG - chr3_3:70713219-70713238 Msa0469040:CDS 40.0%
AGTTGCAAAGAGAAAGAAGG+TGG - chr3_3:70713284-70713303 Msa0469040:CDS 40.0%
GATTTGATTCTGCATTCCAG+AGG - chr3_3:70713567-70713586 Msa0469040:CDS 40.0%
! TTTCGGATTTTAGACCGGAG+GGG + chr3_3:70707156-70707175 None:intergenic 45.0%
! CTTTTCGGATTTTAGACCGG+AGG + chr3_3:70707158-70707177 None:intergenic 45.0%
!! TCTTTGATTGAAGTGCTGGG+AGG + chr3_3:70707186-70707205 None:intergenic 45.0%
AAGATGAAATGCGACCCTGA+AGG - chr3_3:70707202-70707221 Msa0469040:three_prime_UTR 45.0%
! ACTGCGGATTAAGAGGAGTT+CGG + chr3_3:70707236-70707255 None:intergenic 45.0%
GGGAGGAATTGAATTGACTG+CGG + chr3_3:70707252-70707271 None:intergenic 45.0%
TTGTTGGAAGAGTTCAAGGG+AGG + chr3_3:70707269-70707288 None:intergenic 45.0%
!! AGTTCATGGCGGATTGTTGT+TGG + chr3_3:70707285-70707304 None:intergenic 45.0%
!! GCAACTCAGCGAGTTTGTTA+GGG + chr3_3:70707420-70707439 None:intergenic 45.0%
! AGCAACTCAGCGAGTTTGTT+AGG + chr3_3:70707421-70707440 None:intergenic 45.0%
!!! GTTCTGAAGTGCACGGTTTT+TGG + chr3_3:70707747-70707766 None:intergenic 45.0%
ATAGCAAGAGGATGAAGACC+GGG - chr3_3:70707988-70708007 Msa0469040:intron 45.0%
AAACCTTGACGATGGATGGA+AGG + chr3_3:70708101-70708120 None:intergenic 45.0%
! TGATGATGAAAGCAGTGACG+AGG - chr3_3:70708277-70708296 Msa0469040:intron 45.0%
GAGACGGTTTATAAGGTGAG+AGG - chr3_3:70708335-70708354 Msa0469040:CDS 45.0%
TAGAAGTTCAGAAGAGGGTG+GGG - chr3_3:70708514-70708533 Msa0469040:CDS 45.0%
TTCTTGAGGGGATTGACAGA+GGG - chr3_3:70709221-70709240 Msa0469040:intron 45.0%
!! GGCTTTGTTTGTGAGTTTGG+AGG - chr3_3:70709347-70709366 Msa0469040:intron 45.0%
GTTTGTGAGTTTGGAGGGAA+AGG - chr3_3:70709353-70709372 Msa0469040:intron 45.0%
GAGCAGATGGAAGAAGTTGA+GGG - chr3_3:70709404-70709423 Msa0469040:intron 45.0%
! TGGAAGAAGTTGAGGGCTTT+TGG - chr3_3:70709411-70709430 Msa0469040:intron 45.0%
! GGAAGAAGTTGAGGGCTTTT+GGG - chr3_3:70709412-70709431 Msa0469040:intron 45.0%
! GAAGAAGTTGAGGGCTTTTG+GGG - chr3_3:70709413-70709432 Msa0469040:intron 45.0%
! AAGAAGTTGAGGGCTTTTGG+GGG - chr3_3:70709414-70709433 Msa0469040:intron 45.0%
TTGAGTTCCCCCAAATTAGG+AGG + chr3_3:70709466-70709485 None:intergenic 45.0%
! GTATTGGAGGAGGATTTTGG+AGG - chr3_3:70709491-70709510 Msa0469040:CDS 45.0%
TTGGGAGGTGGGAAATATAG+GGG + chr3_3:70709651-70709670 None:intergenic 45.0%
! CTTTGGGAGGTGGGAAATAT+AGG + chr3_3:70709653-70709672 None:intergenic 45.0%
TTTGGGAGTTCGAACAGAAG+GGG + chr3_3:70709680-70709699 None:intergenic 45.0%
GTTTGGGAGTTCGAACAGAA+GGG + chr3_3:70709681-70709700 None:intergenic 45.0%
TGTTTGGGAGTTCGAACAGA+AGG + chr3_3:70709682-70709701 None:intergenic 45.0%
GAACTCCCAAACAAAGCCTT+GGG - chr3_3:70709689-70709708 Msa0469040:intron 45.0%
AACTCCCAAACAAAGCCTTG+GGG - chr3_3:70709690-70709709 Msa0469040:intron 45.0%
!! TAGACCCCAAGGCTTTGTTT+GGG + chr3_3:70709697-70709716 None:intergenic 45.0%
!! ATAGACCCCAAGGCTTTGTT+TGG + chr3_3:70709698-70709717 None:intergenic 45.0%
AAAGCCTTGGGGTCTATCTT+TGG - chr3_3:70709701-70709720 Msa0469040:intron 45.0%
AAGCCTTGGGGTCTATCTTT+GGG - chr3_3:70709702-70709721 Msa0469040:intron 45.0%
AAACCCAAAGATAGACCCCA+AGG + chr3_3:70709708-70709727 None:intergenic 45.0%
TGAAGCTAAGTTTGGAGGGA+GGG + chr3_3:70709959-70709978 None:intergenic 45.0%
TTGAAGCTAAGTTTGGAGGG+AGG + chr3_3:70709960-70709979 None:intergenic 45.0%
TGAACGAGTGCAAGTGCAAA+AGG + chr3_3:70709986-70710005 None:intergenic 45.0%
TGAACGGGTGCAAGTACAAA+AGG + chr3_3:70710063-70710082 None:intergenic 45.0%
TTGTACTTGCACCCGTTCAT+AGG - chr3_3:70710064-70710083 Msa0469040:CDS 45.0%
! TGACAGGAGTACGCTTTGAT+TGG - chr3_3:70711150-70711169 Msa0469040:intron 45.0%
TGTTCAGTATGCTTGTAGCG+TGG - chr3_3:70711444-70711463 Msa0469040:intron 45.0%
AAGGGAGTTATCCCATTCCA+AGG + chr3_3:70711471-70711490 None:intergenic 45.0%
ATAGGGCAAGGTCTTGAAGT+AGG + chr3_3:70711592-70711611 None:intergenic 45.0%
! ACCGTAACTCTTTTGTGTGG+GGG - chr3_3:70711683-70711702 Msa0469040:intron 45.0%
CTGCTAATTAAGAAGGACCG+AGG - chr3_3:70711785-70711804 Msa0469040:intron 45.0%
TAATTAAGAAGGACCGAGGG+AGG - chr3_3:70711789-70711808 Msa0469040:intron 45.0%
!! TAAGCCTTTGGTCTTGCCTT+GGG + chr3_3:70711824-70711843 None:intergenic 45.0%
!! ATAAGCCTTTGGTCTTGCCT+TGG + chr3_3:70711825-70711844 None:intergenic 45.0%
AAGGCAAGACCAAAGGCTTA+TGG - chr3_3:70711824-70711843 Msa0469040:intron 45.0%
TTGCGGTTCAGAAAATGAGC+AGG - chr3_3:70711937-70711956 Msa0469040:intron 45.0%
CAGCTAGGCAGTGATAATAC+CGG - chr3_3:70711998-70712017 Msa0469040:intron 45.0%
GGCTTCATCATCATCACTTC+CGG + chr3_3:70712020-70712039 None:intergenic 45.0%
GATGAAGCCGAAGATCATGA+TGG - chr3_3:70712031-70712050 Msa0469040:intron 45.0%
!! TGAAGAGGATGGTGGGATTT+CGG - chr3_3:70712147-70712166 Msa0469040:intron 45.0%
TTTCCAATGCAGACTTCCAG+AGG - chr3_3:70712365-70712384 Msa0469040:intron 45.0%
! CCTTTAGTTCCTTGATCCTC+TGG + chr3_3:70712384-70712403 None:intergenic 45.0%
CCAGAGGATCAAGGAACTAA+AGG - chr3_3:70712381-70712400 Msa0469040:CDS 45.0%
! CTAGGTTTAAAGCGAGTGGA+TGG - chr3_3:70712567-70712586 Msa0469040:intron 45.0%
AGCGGCTGTCAAACAGAAAA+AGG - chr3_3:70712803-70712822 Msa0469040:intron 45.0%
GGTCTGGTAAACAACAACGT+GGG - chr3_3:70713343-70713362 Msa0469040:CDS 45.0%
! AGCTTCTCGTTGATTGCAGT+TGG + chr3_3:70713481-70713500 None:intergenic 45.0%
!!! TTTTTTTTTTTTTAAATATC+AGG - chr3_3:70708162-70708181 Msa0469040:CDS 5.0%
!!! TTTTTTATATTAAATTTTGA+TGG - chr3_3:70713515-70713534 Msa0469040:CDS 5.0%
GTTCGGATTCGTAGCCTTCA+GGG + chr3_3:70707219-70707238 None:intergenic 50.0%
AGTTCGGATTCGTAGCCTTC+AGG + chr3_3:70707220-70707239 None:intergenic 50.0%
ATCGGCAAGATCTTTGGCGA+CGG + chr3_3:70707341-70707360 None:intergenic 50.0%
AAAAGGAGGTGAGGTGAGAG+AGG + chr3_3:70707375-70707394 None:intergenic 50.0%
!! AGAGAGGTGCTGAGGGTAAA+AGG + chr3_3:70707392-70707411 None:intergenic 50.0%
!! GGAATTCAGAGAGGTGCTGA+GGG + chr3_3:70707399-70707418 None:intergenic 50.0%
AGCTTCACAAGAGACGGACA+TGG - chr3_3:70708038-70708057 Msa0469040:intron 50.0%
CTTCCTTCCATCCATCGTCA+AGG - chr3_3:70708095-70708114 Msa0469040:intron 50.0%
GTTCTTGAGGGGATTGACAG+AGG - chr3_3:70709220-70709239 Msa0469040:intron 50.0%
TGAGTTTGGAGGGAAAGGCA+GGG - chr3_3:70709358-70709377 Msa0469040:intron 50.0%
GGAGCAGATGGAAGAAGTTG+AGG - chr3_3:70709403-70709422 Msa0469040:intron 50.0%
CGAACTCCCAAACAAAGCCT+TGG - chr3_3:70709688-70709707 Msa0469040:intron 50.0%
GCACCCGTTCATAGGAGATA+AGG - chr3_3:70710072-70710091 Msa0469040:intron 50.0%
TGCTAGCTGATGTACCTTGG+TGG + chr3_3:70710204-70710223 None:intergenic 50.0%
! AAGAGCGCGGATCATCTGAA+AGG - chr3_3:70710275-70710294 Msa0469040:intron 50.0%
! TAACATCTCGTTGATGGGGC+TGG + chr3_3:70710808-70710827 None:intergenic 50.0%
TTTGATTGCAGCAGCGGTTC+AGG - chr3_3:70710832-70710851 Msa0469040:intron 50.0%
GGTTCAGGCTTGCCATGATA+TGG - chr3_3:70710847-70710866 Msa0469040:intron 50.0%
AACAAGGGCTCAACTGCATC+AGG + chr3_3:70711031-70711050 None:intergenic 50.0%
TACTTACCAGTGGCATACGC+AGG + chr3_3:70711240-70711259 None:intergenic 50.0%
TATGCTTGTAGCGTGGTCCT+TGG - chr3_3:70711451-70711470 Msa0469040:intron 50.0%
TTGTAGCGTGGTCCTTGGAA+TGG - chr3_3:70711456-70711475 Msa0469040:intron 50.0%
TGTAGCGTGGTCCTTGGAAT+GGG - chr3_3:70711457-70711476 Msa0469040:intron 50.0%
CCCCCCACACAAAAGAGTTA+CGG + chr3_3:70711687-70711706 None:intergenic 50.0%
! CCGTAACTCTTTTGTGTGGG+GGG - chr3_3:70711684-70711703 Msa0469040:intron 50.0%
!! AAGCCTTTGGTCTTGCCTTG+GGG + chr3_3:70711823-70711842 None:intergenic 50.0%
ATCTGCAACAACTCAGCACC+AGG + chr3_3:70711875-70711894 None:intergenic 50.0%
TCTGACGATGACAACCAGCT+AGG - chr3_3:70711983-70712002 Msa0469040:intron 50.0%
CGGTATTATCACTGCCTAGC+TGG + chr3_3:70712000-70712019 None:intergenic 50.0%
CAGTGAAGAGGCTGATGAAG+AGG - chr3_3:70712132-70712151 Msa0469040:intron 50.0%
GAAGAGGCTGATGAAGAGGA+TGG - chr3_3:70712136-70712155 Msa0469040:intron 50.0%
AGGCTGATGAAGAGGATGGT+GGG - chr3_3:70712140-70712159 Msa0469040:intron 50.0%
GGTGGGATTTCGGAACATGA+AGG - chr3_3:70712157-70712176 Msa0469040:intron 50.0%
!! CAGCTGCTGATTCAAGTCTC+CGG - chr3_3:70712278-70712297 Msa0469040:intron 50.0%
!! AGCTGCTGATTCAAGTCTCC+GGG - chr3_3:70712279-70712298 Msa0469040:intron 50.0%
!! TCTCCGGGCTTTGAAGAAGT+TGG - chr3_3:70712294-70712313 Msa0469040:intron 50.0%
CTGCCAACTTCTTCAAAGCC+CGG + chr3_3:70712300-70712319 None:intergenic 50.0%
!! GGGCTTTGAAGAAGTTGGCA+GGG - chr3_3:70712299-70712318 Msa0469040:intron 50.0%
GAAGTTGGCAGGGACAACAA+TGG - chr3_3:70712309-70712328 Msa0469040:intron 50.0%
GCCCTGCCAGAAAATGAAGA+TGG - chr3_3:70712337-70712356 Msa0469040:intron 50.0%
! GATCCTCTGGAAGTCTGCAT+TGG + chr3_3:70712371-70712390 None:intergenic 50.0%
TGCAGACTTCCAGAGGATCA+AGG - chr3_3:70712372-70712391 Msa0469040:CDS 50.0%
AGAACTGCATTAGCGCAGCA+CGG - chr3_3:70712501-70712520 Msa0469040:intron 50.0%
GCTTAACAAGGAGGAGAGGT+TGG - chr3_3:70712734-70712753 Msa0469040:intron 50.0%
AGGTTGGCAATGGTTAGAGC+AGG - chr3_3:70712750-70712769 Msa0469040:intron 50.0%
GGTTGGCAATGGTTAGAGCA+GGG - chr3_3:70712751-70712770 Msa0469040:intron 50.0%
AGGATAAAACAGCAGCGGTC+TGG - chr3_3:70713327-70713346 Msa0469040:CDS 50.0%
CGGTCTGGTAAACAACAACG+TGG - chr3_3:70713342-70713361 Msa0469040:CDS 50.0%
CTGGTAAACAACAACGTGGG+AGG - chr3_3:70713346-70713365 Msa0469040:CDS 50.0%
! TGGGAGGAAAGCGTGGAAAT+AGG - chr3_3:70713362-70713381 Msa0469040:CDS 50.0%
! GGGAGGAAAGCGTGGAAATA+GGG - chr3_3:70713363-70713382 Msa0469040:CDS 50.0%
!! CTGGTGGTGGCTACGTTTCA+TGG + chr3_3:70707107-70707126 None:intergenic 55.0%
! TGCTGGGAGGCTGAGCTTTT+CGG + chr3_3:70707173-70707192 None:intergenic 55.0%
GTCGTTGGAGATGCCGGAAA+TGG + chr3_3:70707314-70707333 None:intergenic 55.0%
CAAGATCTTTGGCGACGGTG+GGG + chr3_3:70707336-70707355 None:intergenic 55.0%
GCAAGATCTTTGGCGACGGT+GGG + chr3_3:70707337-70707356 None:intergenic 55.0%
GCTGAGGGTAAAAGGAGGTG+AGG + chr3_3:70707384-70707403 None:intergenic 55.0%
!! GAGGTGCTGAGGGTAAAAGG+AGG + chr3_3:70707389-70707408 None:intergenic 55.0%
!! GGGAATTCAGAGAGGTGCTG+AGG + chr3_3:70707400-70707419 None:intergenic 55.0%
GCTGCTCGAACACTTCCTTC+TGG - chr3_3:70707448-70707467 Msa0469040:CDS 55.0%
AGGATGAAGACCGGGCAAAG+AGG - chr3_3:70707996-70708015 Msa0469040:intron 55.0%
GGATGAAGACCGGGCAAAGA+GGG - chr3_3:70707997-70708016 Msa0469040:intron 55.0%
AGTTCAGAAGAGGGTGGGGT+TGG - chr3_3:70708518-70708537 Msa0469040:CDS 55.0%
GTTCAGAAGAGGGTGGGGTT+GGG - chr3_3:70708519-70708538 Msa0469040:CDS 55.0%
! GCTGAGGGCATGTTAGTTGG+AGG - chr3_3:70709107-70709126 Msa0469040:CDS 55.0%
GTGAGTTTGGAGGGAAAGGC+AGG - chr3_3:70709357-70709376 Msa0469040:intron 55.0%
GAGTTTGGAGGGAAAGGCAG+GGG - chr3_3:70709359-70709378 Msa0469040:intron 55.0%
GGAAAGGCAGGGGATAGCTT+TGG - chr3_3:70709369-70709388 Msa0469040:intron 55.0%
GAACAGAAGGGGAGGGCTTT+GGG + chr3_3:70709669-70709688 None:intergenic 55.0%
GGAGTTCGAACAGAAGGGGA+GGG + chr3_3:70709676-70709695 None:intergenic 55.0%
AAGGGCTCAACTGCATCAGG+AGG + chr3_3:70711028-70711047 None:intergenic 55.0%
GATATGCCTGCGTATGCCAC+TGG - chr3_3:70711231-70711250 Msa0469040:intron 55.0%
CTTGCGCATCCAACAAGGGT+TGG - chr3_3:70711323-70711342 Msa0469040:intron 55.0%
TGACCCCAAGGCAAGACCAA+AGG - chr3_3:70711817-70711836 Msa0469040:intron 55.0%
AATGTTGCGGCTGACGTTCC+TGG - chr3_3:70711854-70711873 Msa0469040:intron 55.0%
GAGGCTGATGAAGAGGATGG+TGG - chr3_3:70712139-70712158 Msa0469040:intron 55.0%
!! CGGGCTTTGAAGAAGTTGGC+AGG - chr3_3:70712298-70712317 Msa0469040:intron 55.0%
GAACTGCATTAGCGCAGCAC+GGG - chr3_3:70712502-70712521 Msa0469040:intron 55.0%
CAAGGAGGAGAGGTTGGCAA+TGG - chr3_3:70712740-70712759 Msa0469040:intron 55.0%
TGGCAATGGTTAGAGCAGGG+AGG - chr3_3:70712754-70712773 Msa0469040:intron 55.0%
GGCAATGGTTAGAGCAGGGA+GGG - chr3_3:70712755-70712774 Msa0469040:intron 55.0%
AATGGTTAGAGCAGGGAGGG+AGG - chr3_3:70712758-70712777 Msa0469040:intron 55.0%
AGGACAGTACCATGCTCGAG+CGG - chr3_3:70712785-70712804 Msa0469040:intron 55.0%
AACAACGTGGGAGGAAAGCG+TGG - chr3_3:70713355-70713374 Msa0469040:CDS 55.0%
!! ACGGAGGCATTTCTCCCCTC+CGG - chr3_3:70707139-70707158 Msa0469040:three_prime_UTR 60.0%
GGCAAGATCTTTGGCGACGG+TGG + chr3_3:70707338-70707357 None:intergenic 60.0%
TCACAAGCGCCCTCTTTGCC+CGG + chr3_3:70708009-70708028 None:intergenic 60.0%
! GGGGCTGAGGGCATGTTAGT+TGG - chr3_3:70709104-70709123 Msa0469040:CDS 60.0%
CGAACAGAAGGGGAGGGCTT+TGG + chr3_3:70709670-70709689 None:intergenic 60.0%
GGGAGTTCGAACAGAAGGGG+AGG + chr3_3:70709677-70709696 None:intergenic 60.0%
TGGAGGGAGGGAGTAGAGCA+GGG + chr3_3:70709947-70709966 None:intergenic 60.0%
TTGGAGGGAGGGAGTAGAGC+AGG + chr3_3:70709948-70709967 None:intergenic 60.0%
GGTCTTGCCTTGGGGTCAGT+AGG + chr3_3:70711815-70711834 None:intergenic 60.0%
AGAGCAGGGAGGGAGGAAAG+AGG - chr3_3:70712765-70712784 Msa0469040:intron 60.0%
GTTTGACAGCCGCTCGAGCA+TGG + chr3_3:70712797-70712816 None:intergenic 60.0%
GAAATGCCTCCGTCGCGGCA+TGG + chr3_3:70707132-70707151 None:intergenic 65.0%
GGGGAGAAATGCCTCCGTCG+CGG + chr3_3:70707137-70707156 None:intergenic 65.0%
GGTGGGGTCGTTGGAGATGC+CGG + chr3_3:70707320-70707339 None:intergenic 65.0%
TTTGGCGACGGTGGGGTCGT+TGG + chr3_3:70707329-70707348 None:intergenic 65.0%
!! AGGGGAGGGCTTTGGGAGGT+GGG + chr3_3:70709662-70709681 None:intergenic 65.0%
!! AAGGGGAGGGCTTTGGGAGG+TGG + chr3_3:70709663-70709682 None:intergenic 65.0%
!! CAGAAGGGGAGGGCTTTGGG+AGG + chr3_3:70709666-70709685 None:intergenic 65.0%
TGGGGTCAGTAGGCCTCCCT+CGG + chr3_3:70711805-70711824 None:intergenic 65.0%
AGGGAGGCCTACTGACCCCA+AGG - chr3_3:70711805-70711824 Msa0469040:intron 65.0%
!! TCGCGGCATGGCTCTGGTGG+TGG + chr3_3:70707120-70707139 None:intergenic 70.0%
CCACCAGAGCCATGCCGCGA+CGG - chr3_3:70707120-70707139 Msa0469040:three_prime_UTR 70.0%
!! CCGTCGCGGCATGGCTCTGG+TGG + chr3_3:70707123-70707142 None:intergenic 75.0%
CCTCCGTCGCGGCATGGCTC+TGG + chr3_3:70707126-70707145 None:intergenic 75.0%
CCAGAGCCATGCCGCGACGG+AGG - chr3_3:70707123-70707142 Msa0469040:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 70707097 70713622 70707097 ID=Msa0469040;Name=Msa0469040
chr3_3 mRNA 70707097 70713622 70707097 ID=Msa0469040-mRNA-1;Parent=Msa0469040;Name=Msa0469040-mRNA-1;_AED=0.12;_eAED=0.12;_QI=9|1|1|1|1|1|15|239|815
chr3_3 exon 70707097 70707485 70707097 ID=Msa0469040-mRNA-1:exon:17300;Parent=Msa0469040-mRNA-1
chr3_3 exon 70707895 70708002 70707895 ID=Msa0469040-mRNA-1:exon:17299;Parent=Msa0469040-mRNA-1
chr3_3 exon 70708117 70708233 70708117 ID=Msa0469040-mRNA-1:exon:17298;Parent=Msa0469040-mRNA-1
chr3_3 exon 70708317 70708946 70708317 ID=Msa0469040-mRNA-1:exon:17297;Parent=Msa0469040-mRNA-1
chr3_3 exon 70709043 70709144 70709043 ID=Msa0469040-mRNA-1:exon:17296;Parent=Msa0469040-mRNA-1
chr3_3 exon 70709467 70709520 70709467 ID=Msa0469040-mRNA-1:exon:17295;Parent=Msa0469040-mRNA-1
chr3_3 exon 70709623 70709697 70709623 ID=Msa0469040-mRNA-1:exon:17294;Parent=Msa0469040-mRNA-1
chr3_3 exon 70709851 70709910 70709851 ID=Msa0469040-mRNA-1:exon:17293;Parent=Msa0469040-mRNA-1
chr3_3 exon 70709995 70710090 70709995 ID=Msa0469040-mRNA-1:exon:17292;Parent=Msa0469040-mRNA-1
chr3_3 exon 70710227 70710280 70710227 ID=Msa0469040-mRNA-1:exon:17291;Parent=Msa0469040-mRNA-1
chr3_3 exon 70710374 70710523 70710374 ID=Msa0469040-mRNA-1:exon:17290;Parent=Msa0469040-mRNA-1
chr3_3 exon 70712370 70712505 70712370 ID=Msa0469040-mRNA-1:exon:17289;Parent=Msa0469040-mRNA-1
chr3_3 exon 70712603 70712727 70712603 ID=Msa0469040-mRNA-1:exon:17288;Parent=Msa0469040-mRNA-1
chr3_3 exon 70712932 70713108 70712932 ID=Msa0469040-mRNA-1:exon:17287;Parent=Msa0469040-mRNA-1
chr3_3 exon 70713200 70713622 70713200 ID=Msa0469040-mRNA-1:exon:17286;Parent=Msa0469040-mRNA-1
chr3_3 five_prime_UTR 70713614 70713622 70713614 ID=Msa0469040-mRNA-1:five_prime_utr;Parent=Msa0469040-mRNA-1
chr3_3 CDS 70713200 70713613 70713200 ID=Msa0469040-mRNA-1:cds;Parent=Msa0469040-mRNA-1
chr3_3 CDS 70712932 70713108 70712932 ID=Msa0469040-mRNA-1:cds;Parent=Msa0469040-mRNA-1
chr3_3 CDS 70712603 70712727 70712603 ID=Msa0469040-mRNA-1:cds;Parent=Msa0469040-mRNA-1
chr3_3 CDS 70712370 70712505 70712370 ID=Msa0469040-mRNA-1:cds;Parent=Msa0469040-mRNA-1
chr3_3 CDS 70710374 70710523 70710374 ID=Msa0469040-mRNA-1:cds;Parent=Msa0469040-mRNA-1
chr3_3 CDS 70710227 70710280 70710227 ID=Msa0469040-mRNA-1:cds;Parent=Msa0469040-mRNA-1
chr3_3 CDS 70709995 70710090 70709995 ID=Msa0469040-mRNA-1:cds;Parent=Msa0469040-mRNA-1
chr3_3 CDS 70709851 70709910 70709851 ID=Msa0469040-mRNA-1:cds;Parent=Msa0469040-mRNA-1
chr3_3 CDS 70709623 70709697 70709623 ID=Msa0469040-mRNA-1:cds;Parent=Msa0469040-mRNA-1
chr3_3 CDS 70709467 70709520 70709467 ID=Msa0469040-mRNA-1:cds;Parent=Msa0469040-mRNA-1
chr3_3 CDS 70709043 70709144 70709043 ID=Msa0469040-mRNA-1:cds;Parent=Msa0469040-mRNA-1
chr3_3 CDS 70708317 70708946 70708317 ID=Msa0469040-mRNA-1:cds;Parent=Msa0469040-mRNA-1
chr3_3 CDS 70708117 70708233 70708117 ID=Msa0469040-mRNA-1:cds;Parent=Msa0469040-mRNA-1
chr3_3 CDS 70707895 70708002 70707895 ID=Msa0469040-mRNA-1:cds;Parent=Msa0469040-mRNA-1
chr3_3 CDS 70707336 70707485 70707336 ID=Msa0469040-mRNA-1:cds;Parent=Msa0469040-mRNA-1
chr3_3 three_prime_UTR 70707097 70707335 70707097 ID=Msa0469040-mRNA-1:three_prime_utr;Parent=Msa0469040-mRNA-1
Gene Sequence

>Msa0469040

ATGAAACGTAGCCACCACCAGAGCCATGCCGCGACGGAGGCATTTCTCCCCTCCGGTCTAAAATCCGAAAAGCTCAGCCTCCCAGCACTTCAATCAAAGATGAAATGCGACCCTGAAGGCTACGAATCCGAACTCCTCTTAATCCGCAGTCAATTCAATTCCTCCCTTGAACTCTTCCAACAACAATCCGCCATGAACTTCACTTCCATTTCCGGCATCTCCAACGACCCCACCGTCGCCAAAGATCTTGCCGATAAAGCTATGTTCCTCTCTCACCTCACCTCCTTTTACCCTCAGCACCTCTCTGAATTCCCTAACAAACTCGCTGAGTTGCTTCGTTGTGCTGCTCGAACACTTCCTTCTGGACTTCGTAACGATTTAGCAAATTCTCTTATACTACTTGTTAATCGTGAGATTGTTAGTATTAAAGATACACTTTCGTTGTTTATGGAGCTTCAAACGTTAGGTGATAAAAAGCTGAGGGAATTGACGTTTTCACACGTTGTTAAAAGCATAAAACGTATGAACCAAAAGCATAAGGATGAAGCCAAAAACCGTGCACTTCAGAACATTCTTTTTGTCATGTTGCAGCAAGAGGATGAAGACCGGGCAAAGAGGGCGCTTGTGACACTATGTGAGCTTCACAAGAGACGGACATGGTTTGATGAGAGAACAGCAAATGCAATTTGCACTGCTTCCTTCCATCCATCGTCAAGAATCATGATATCAACATTATGCTTTCTGCTTGATTATGAGAAGATTGAAAACTACCAAGATAGTGATGATGAAAGCAGTGACGAGGAAGCAACCGAATCACCTCAAGTTATTCTTAGAAGGGAGACGGTTTATAAGGCAAGCCACCAAGGTACATCAGCTAGCAAAAAGAAAAAGAAAAGGCAATTAGACCGCATAATACGTAACATGAAAAAGAAAGAGCGCGGATCATCTGAAAGGAAGAATAACATCTATTACTCACCACTCAACCATCTTAAAGATCCACAGGGTTTTGTGGAGAAGCTGTTTTCACGTCTGCAGAAATGCAATGAGCGATTTGAGGTCAAGATGATGATGTTGAAAGTGATAGCTCGAACAATTGGGCTTCACCAGTTAATGTTGTTAAACTTTTACCCTTATCTTCAGAAATATATCCAGCCCCATCAACGAGATGTTACAAATTTGATTGCAGCAGCGGTTCAGGCTTGCCATGATATGGTTCCTCCTGATGCAGTTGAGCCCTTGTTTAAACAAATTGTAAATCAATTTGTACATGACCGCTCACGTCCAGAGGCTATCACTGTTGGAATAAATGCAGTCAGGGAGATATGCCTGCGTATGCCACTGTTAATGAATGAAGACCTACTTCAAGACCTTGCCCTATATAAGAAGTCACATGAGAAAGGAGTTTCGATAGCAGCTCGATCTCTCATTACATTATTCCGAGAGGTTTGCCCTTCACTGCTAATTAAGAAGGACCGAGGGAGGCCTACTGACCCCAAGGCAAGACCAAAGGCTTATGGAGAAGTCAATGTTGCGGCTGACGTTCCTGGTGCTGAGTTGTTGCAGATTATTGATGATGATGTTGAGCAGGAGAGTTCTCATTCTGATGATTGCGGTTCAGAAAATGAGCAGGAAGATGATCAGGTAAGTTTGAACTCTGACGATGACAACCAGCTAGGCAGTGATAATACCGGAAGTGATGATGATGAAGCCGAAGATCATGATGGTGAATCAGACGATGAAAACGATAGAAGTTCTGATTACGAAACCAGTGGTGATGATGCTGATAATGTTGATCTAGAAGACAGTGAAGAGGCTGATGAAGAGGATGGTGGGATTTCGGAACATGAAGGAGATGGTGATCTGCATATTCTTGGAAGTGTGGATACAAAAACTACGTTAAAAGACTCAGCAAAAAAGAGGAAGTTTAGCGATTTCAACGATCAACTTACAGCTGCTGATTCAAGTCTCCGGGCTTTGAAGAAGTTGGCAGGGACAACAATGGAGAATGCCCTGCCAGAAAATGAAGATGGAATTCTTTCCAATGCAGACTTCCAGAGGATCAAGGAACTAAAGGCCAAAAACGAAGCAAGAACTGCATTAGCGCAGCACGGGCTTTTAAAGTCATCAACAAATAAGATTCCAAGCTCTGATCAACTAGGTTTAAAGCGAGTGGATGGTTCCATGCTTGAAGCTCATGTAAAGAAAAAGCTTAACAAGGAGGAGAGGTTGGCAATGGTTAGAGCAGGGAGGGAGGAAAGAGGACAGTACCATGCTCGAGCGGCTGTCAAACAGAAAAAGACGGGTGGTCTAAGTAACAAGCAAAAGGAACACAAGAAACAAATGCCGTTAGTTGCAAAGAGAAAGAAGGTGGCAAGAACTAAGATAGAGAAAAGGATAAAACAGCAGCGGTCTGGTAAACAACAACGTGGGAGGAAAGCGTGGAAATAG

Protein sequence

>Msa0469040

MKRSHHQSHAATEAFLPSGLKSEKLSLPALQSKMKCDPEGYESELLLIRSQFNSSLELFQQQSAMNFTSISGISNDPTVAKDLADKAMFLSHLTSFYPQHLSEFPNKLAELLRCAARTLPSGLRNDLANSLILLVNREIVSIKDTLSLFMELQTLGDKKLRELTFSHVVKSIKRMNQKHKDEAKNRALQNILFVMLQQEDEDRAKRALVTLCELHKRRTWFDERTANAICTASFHPSSRIMISTLCFLLDYEKIENYQDSDDESSDEEATESPQVILRRETVYKASHQGTSASKKKKKRQLDRIIRNMKKKERGSSERKNNIYYSPLNHLKDPQGFVEKLFSRLQKCNERFEVKMMMLKVIARTIGLHQLMLLNFYPYLQKYIQPHQRDVTNLIAAAVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEAITVGINAVREICLRMPLLMNEDLLQDLALYKKSHEKGVSIAARSLITLFREVCPSLLIKKDRGRPTDPKARPKAYGEVNVAADVPGAELLQIIDDDVEQESSHSDDCGSENEQEDDQVSLNSDDDNQLGSDNTGSDDDEAEDHDGESDDENDRSSDYETSGDDADNVDLEDSEEADEEDGGISEHEGDGDLHILGSVDTKTTLKDSAKKRKFSDFNDQLTAADSSLRALKKLAGTTMENALPENEDGILSNADFQRIKELKAKNEARTALAQHGLLKSSTNKIPSSDQLGLKRVDGSMLEAHVKKKLNKEERLAMVRAGREERGQYHARAAVKQKKTGGLSNKQKEHKKQMPLVAKRKKVARTKIEKRIKQQRSGKQQRGRKAWK*