Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380410 | XP_013450245.1 | 91.213 | 478 | 17 | 2 | 1 | 478 | 1 | 453 | 0.0 | 847 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380410 | sp|Q58D06|WDR74_BOVIN | 39.333 | 150 | 86 | 4 | 180 | 327 | 149 | 295 | 9.28e-27 | 114 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380410 | A0A072U548 | 91.213 | 478 | 17 | 2 | 1 | 478 | 1 | 453 | 0.0 | 847 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0047160 | Msa1380410 | 0.827677 | 1.370794e-54 | -8.615850e-47 |
| Msa0076780 | Msa1380410 | 0.805114 | 1.560818e-49 | -8.615850e-47 |
| Msa0094470 | Msa1380410 | 0.835635 | 1.496426e-56 | -8.615850e-47 |
| Msa0097600 | Msa1380410 | 0.802671 | 5.023056e-49 | -8.615850e-47 |
| Msa1344850 | Msa1380410 | 0.805134 | 1.545813e-49 | -8.615850e-47 |
| Msa1355700 | Msa1380410 | 0.811147 | 8.096509e-51 | -8.615850e-47 |
| Msa1363860 | Msa1380410 | 0.820451 | 6.813674e-53 | -8.615850e-47 |
| Msa1366600 | Msa1380410 | 0.808470 | 3.049358e-50 | -8.615850e-47 |
| Msa1380410 | Msa1385810 | 0.829132 | 6.107617e-55 | -8.615850e-47 |
| Msa1380410 | Msa1387190 | 0.810844 | 9.416841e-51 | -8.615850e-47 |
| Msa1380410 | Msa1394290 | 0.806688 | 7.284632e-50 | -8.615850e-47 |
| Msa1380410 | Msa1403570 | 0.827365 | 1.628803e-54 | -8.615850e-47 |
| Msa1380410 | Msa1409260 | 0.836946 | 6.946301e-57 | -8.615850e-47 |
| Msa1380410 | Msa1443300 | 0.803307 | 3.711063e-49 | -8.615850e-47 |
| Msa0621950 | Msa1380410 | 0.827617 | 1.417225e-54 | -8.615850e-47 |
| Msa0695130 | Msa1380410 | 0.815731 | 7.953475e-52 | -8.615850e-47 |
| Msa0734960 | Msa1380410 | 0.817219 | 3.693042e-52 | -8.615850e-47 |
| Msa0790400 | Msa1380410 | 0.807126 | 5.887225e-50 | -8.615850e-47 |
| Msa0127040 | Msa1380410 | 0.811619 | 6.393947e-51 | -8.615850e-47 |
| Msa0138920 | Msa1380410 | 0.826361 | 2.829513e-54 | -8.615850e-47 |
| Msa0146280 | Msa1380410 | 0.800331 | 1.515195e-48 | -8.615850e-47 |
| Msa0174000 | Msa1380410 | 0.800843 | 1.191406e-48 | -8.615850e-47 |
| Msa0188690 | Msa1380410 | 0.811797 | 5.849755e-51 | -8.615850e-47 |
| Msa0226470 | Msa1380410 | 0.810308 | 1.229441e-50 | -8.615850e-47 |
| Msa1227690 | Msa1380410 | 0.814906 | 1.213279e-51 | -8.615850e-47 |
| Msa1252190 | Msa1380410 | 0.818499 | 1.898553e-52 | -8.615850e-47 |
| Msa1254710 | Msa1380410 | 0.802298 | 5.996300e-49 | -8.615850e-47 |
| Msa1265630 | Msa1380410 | 0.827502 | 1.510023e-54 | -8.615850e-47 |
| Msa1270620 | Msa1380410 | 0.818541 | 1.857328e-52 | -8.615850e-47 |
| Msa1270690 | Msa1380410 | 0.817472 | 3.240044e-52 | -8.615850e-47 |
| Msa1294840 | Msa1380410 | 0.812356 | 4.417785e-51 | -8.615850e-47 |
| Msa1302380 | Msa1380410 | 0.813221 | 2.856953e-51 | -8.615850e-47 |
| Msa1306990 | Msa1380410 | 0.837321 | 5.569195e-57 | -8.615850e-47 |
| Msa0376280 | Msa1380410 | 0.800634 | 1.314386e-48 | -8.615850e-47 |
| Msa0387730 | Msa1380410 | 0.804196 | 2.426007e-49 | -8.615850e-47 |
| Msa0413450 | Msa1380410 | 0.808408 | 3.143129e-50 | -8.615850e-47 |
| Msa0422840 | Msa1380410 | 0.808848 | 2.530887e-50 | -8.615850e-47 |
| Msa0469040 | Msa1380410 | 0.800292 | 1.543544e-48 | -8.615850e-47 |
| Msa0474700 | Msa1380410 | 0.801180 | 1.017027e-48 | -8.615850e-47 |
| Msa0980940 | Msa1380410 | 0.808770 | 2.630086e-50 | -8.615850e-47 |
| Msa0981430 | Msa1380410 | 0.800493 | 1.404361e-48 | -8.615850e-47 |
| Msa1017510 | Msa1380410 | 0.864901 | 8.710432e-65 | -8.615850e-47 |
| Msa1019240 | Msa1380410 | 0.812409 | 4.301975e-51 | -8.615850e-47 |
| Msa1019260 | Msa1380410 | 0.808424 | 3.118439e-50 | -8.615850e-47 |
| Msa1041210 | Msa1380410 | 0.846466 | 2.134231e-59 | -8.615850e-47 |
| Msa1073900 | Msa1380410 | 0.804706 | 1.899511e-49 | -8.615850e-47 |
| Msa1101600 | Msa1380410 | 0.802414 | 5.674668e-49 | -8.615850e-47 |
| Msa0239450 | Msa1380410 | 0.835535 | 1.586137e-56 | -8.615850e-47 |
| Msa0260620 | Msa1380410 | 0.806857 | 6.708269e-50 | -8.615850e-47 |
| Msa0262480 | Msa1380410 | 0.801331 | 9.471110e-49 | -8.615850e-47 |
| Msa0270210 | Msa1380410 | 0.817777 | 2.765852e-52 | -8.615850e-47 |
| Msa0291520 | Msa1380410 | 0.811558 | 6.594540e-51 | -8.615850e-47 |
| Msa0307850 | Msa1380410 | 0.803915 | 2.775267e-49 | -8.615850e-47 |
| Msa1119100 | Msa1380410 | 0.942638 | 5.042437e-102 | -8.615850e-47 |
| Msa1119200 | Msa1380410 | 0.956938 | 9.011970e-115 | -8.615850e-47 |
| Msa1126510 | Msa1380410 | 0.807562 | 4.757628e-50 | -8.615850e-47 |
| Msa1133400 | Msa1380410 | 0.826856 | 2.155949e-54 | -8.615850e-47 |
| Msa1165740 | Msa1380410 | 0.828703 | 7.759954e-55 | -8.615850e-47 |
| Msa1166330 | Msa1380410 | 0.836400 | 9.566511e-57 | -8.615850e-47 |
| Msa1166340 | Msa1380410 | 0.836221 | 1.062249e-56 | -8.615850e-47 |
| Msa1174100 | Msa1380410 | 0.822544 | 2.237743e-53 | -8.615850e-47 |
| Msa1179950 | Msa1380410 | 0.822724 | 2.032332e-53 | -8.615850e-47 |
| Msa1179980 | Msa1380410 | 0.823344 | 1.457131e-53 | -8.615850e-47 |
| Msa1201830 | Msa1380410 | 0.819404 | 1.182412e-52 | -8.615850e-47 |
| Msa1217580 | Msa1380410 | 0.826853 | 2.160234e-54 | -8.615850e-47 |
| Msa1218140 | Msa1380410 | 0.823098 | 1.663016e-53 | -8.615850e-47 |
| Msa0490800 | Msa1380410 | 0.804132 | 2.501536e-49 | -8.615850e-47 |
| Msa0550570 | Msa1380410 | 0.804835 | 1.784637e-49 | -8.615850e-47 |
| Msa0571920 | Msa1380410 | 0.802170 | 6.371533e-49 | -8.615850e-47 |
| Msa0572300 | Msa1380410 | 0.816852 | 4.465511e-52 | -8.615850e-47 |
| Msa0846140 | Msa1380410 | 0.809188 | 2.140276e-50 | -8.615850e-47 |
| Msa0888940 | Msa1380410 | 0.805372 | 1.377860e-49 | -8.615850e-47 |
| Msa0897400 | Msa1380410 | 0.805083 | 1.584389e-49 | -8.615850e-47 |
| Msa0963020 | Msa1380410 | 0.821837 | 3.265294e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380410 | MtrunA17_Chr7g0267711 | 91.213 | 478 | 17 | 2 | 1 | 478 | 1 | 453 | 0.0 | 847 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380410 | AT1G29320.1 | 53.382 | 414 | 166 | 3 | 1 | 411 | 1 | 390 | 8.60e-147 | 428 |
| Msa1380410 | AT1G29320.2 | 53.606 | 416 | 163 | 5 | 1 | 411 | 1 | 391 | 5.96e-146 | 426 |
Find 145 sgRNAs with CRISPR-Local
Find 573 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAGAAGTTTGCTTTATT+TGG | 0.096155 | tig0020342:+109601 | Msa1380410:CDS |
| CAGGAGTTTGTGTTACTTTA+TGG | 0.121349 | tig0020342:+114871 | Msa1380410:three_prime_UTR |
| AAGGCGTTGAAGTTAATATT+TGG | 0.160856 | tig0020342:+110322 | Msa1380410:CDS |
| TCTGAAGAGAATAATGTTAT+TGG | 0.190952 | tig0020342:+107257 | Msa1380410:CDS |
| CTAACCTTCAACAATGAAAT+TGG | 0.239759 | tig0020342:-114024 | None:intergenic |
| CTCATGTTCATCATTTCCTT+TGG | 0.278219 | tig0020342:-114657 | None:intergenic |
| TGGATTCAAACTCAAGATTC+TGG | 0.297251 | tig0020342:-107298 | None:intergenic |
| AGTTGATGTTTCATATAATT+AGG | 0.307128 | tig0020342:+115092 | Msa1380410:three_prime_UTR |
| CATACATCCCAATGTTAGTT+TGG | 0.310120 | tig0020342:-114812 | None:intergenic |
| TGGTGGTGAAGCTGCGATTT+TGG | 0.317374 | tig0020342:-106405 | None:intergenic |
| TCCTCGGCCAGTGCTTTAAT+TGG | 0.319494 | tig0020342:-111686 | None:intergenic |
| TCTGAAAAGGACAAAGAAAA+AGG | 0.321181 | tig0020342:-112814 | None:intergenic |
| TAAAAGTACCTGATGGTTAT+TGG | 0.322979 | tig0020342:-110614 | None:intergenic |
| AACATGGAGGAGGTAGGATT+TGG | 0.326091 | tig0020342:+114979 | Msa1380410:three_prime_UTR |
| GGATGGCTATTTACGACTTT+GGG | 0.333336 | tig0020342:+112749 | Msa1380410:CDS |
| TGGTAGCGAATCCGCTCCTT+TGG | 0.333516 | tig0020342:-114483 | None:intergenic |
| TTCATAGTTTCTTCCTTGCT+TGG | 0.344943 | tig0020342:-114503 | None:intergenic |
| ACCTGGAATGTTTGTAATAG+TGG | 0.345723 | tig0020342:+109550 | Msa1380410:CDS |
| AGGCGTTGAAGTTAATATTT+GGG | 0.363980 | tig0020342:+110323 | Msa1380410:CDS |
| GAAGATCCTGTCGCTGAATC+AGG | 0.366839 | tig0020342:-109508 | None:intergenic |
| GATGGCAACACAATCTATCT+AGG | 0.371926 | tig0020342:+111713 | Msa1380410:CDS |
| TTGATAACTGCACGAAGATC+TGG | 0.374516 | tig0020342:+110349 | Msa1380410:CDS |
| GGGTTCATGGCTCACAGATT+TGG | 0.379867 | tig0020342:-110376 | None:intergenic |
| CAATGTTAGTTTGGAATCCT+TGG | 0.381539 | tig0020342:-114803 | None:intergenic |
| GATTCCAATTTCATTGTTGA+AGG | 0.393194 | tig0020342:+114020 | Msa1380410:CDS |
| TGGATGGCTATTTACGACTT+TGG | 0.400867 | tig0020342:+112748 | Msa1380410:CDS |
| CTAAATCACAACCCTTCATC+TGG | 0.401575 | tig0020342:-114752 | None:intergenic |
| TGTGTGTTCTTCACTCTCCT+TGG | 0.402448 | tig0020342:-114630 | None:intergenic |
| AATGAGTGAAACAGCGTTAA+CGG | 0.407170 | tig0020342:-106671 | None:intergenic |
| AATAAAGAAAATATGATAGA+TGG | 0.407882 | tig0020342:+114587 | Msa1380410:CDS |
| TGTTGGAGGTTAACTATTGT+TGG | 0.409661 | tig0020342:-114960 | None:intergenic |
| GACCATCGAAAATTTGTTGC+TGG | 0.414825 | tig0020342:+110589 | Msa1380410:CDS |
| GGTAGCGAATCCGCTCCTTT+GGG | 0.415243 | tig0020342:-114482 | None:intergenic |
| ACCACTATTACAAACATTCC+AGG | 0.418193 | tig0020342:-109551 | None:intergenic |
| AGATCAATCATATTAGTCTA+TGG | 0.423363 | tig0020342:-115232 | None:intergenic |
| TTACTAGGATGGTTAGTTTG+TGG | 0.433912 | tig0020342:+114899 | Msa1380410:three_prime_UTR |
| AGCTTCACCACCACCGTAGT+TGG | 0.434118 | tig0020342:+106415 | Msa1380410:five_prime_UTR |
| TTATAATTTACTTACATGTA+CGG | 0.443505 | tig0020342:+109450 | Msa1380410:CDS |
| CATGCAGAATAGGCTGCTTA+AGG | 0.458100 | tig0020342:-113989 | None:intergenic |
| GAAGCTACCACAGGTAGCTC+AGG | 0.460028 | tig0020342:-112366 | None:intergenic |
| GAAGTTCCTGATTCAGCGAC+AGG | 0.460401 | tig0020342:+109502 | Msa1380410:CDS |
| GTTAACGGACTTAGTTGAAT+CGG | 0.462040 | tig0020342:-106656 | None:intergenic |
| TATAATTTACTTACATGTAC+GGG | 0.462972 | tig0020342:+109451 | Msa1380410:CDS |
| CGAAAATCAATAGAGAGAAC+AGG | 0.464845 | tig0020342:-111656 | None:intergenic |
| AAATATGAAATTCCAGATGA+AGG | 0.466225 | tig0020342:+114740 | Msa1380410:CDS |
| GCTTCACCACCACCGTAGTT+GGG | 0.468688 | tig0020342:+106416 | Msa1380410:five_prime_UTR |
| ACCCCACCTATCTACTACCT+TGG | 0.469187 | tig0020342:-106629 | None:intergenic |
| ATGAAGGGTTGTGATTTAGC+TGG | 0.470545 | tig0020342:+114756 | Msa1380410:exon |
| AGGCAGCTTCTTTCATCTGT+AGG | 0.471788 | tig0020342:+112783 | Msa1380410:CDS |
| TCTGAGCAGATATGTCATAA+AGG | 0.472800 | tig0020342:-111628 | None:intergenic |
| ACATGGAGGAGGTAGGATTT+GGG | 0.473218 | tig0020342:+114980 | Msa1380410:three_prime_UTR |
| GAGAAGTTTGCTTTATTTGG+AGG | 0.475298 | tig0020342:+109604 | Msa1380410:CDS |
| TACTTACATGTACGGGCAAA+GGG | 0.477939 | tig0020342:+109458 | Msa1380410:CDS |
| TAGCAATAGCAATTCTGAAA+AGG | 0.478104 | tig0020342:-112827 | None:intergenic |
| TTAACGGACTTAGTTGAATC+GGG | 0.480921 | tig0020342:-106655 | None:intergenic |
| TACTTTATGGTGAAGTTACT+AGG | 0.480943 | tig0020342:+114884 | Msa1380410:three_prime_UTR |
| TTTGGGCATCTGTTGGCTTG+TGG | 0.482263 | tig0020342:+114997 | Msa1380410:three_prime_UTR |
| GCTAGAGAAACTCCAGTGAC+AGG | 0.483353 | tig0020342:-107200 | None:intergenic |
| GGTAGGATTTGGGCATCTGT+TGG | 0.485309 | tig0020342:+114990 | Msa1380410:three_prime_UTR |
| TCCACTTAGAGCTTTAACCT+TGG | 0.487045 | tig0020342:+106487 | Msa1380410:CDS |
| GCAAAGGGAATGCAAGCATA+AGG | 0.487266 | tig0020342:+109473 | Msa1380410:CDS |
| CCCCACCTATCTACTACCTT+GGG | 0.490032 | tig0020342:-106628 | None:intergenic |
| GCTCTAAGTGGAGGACAACC+AGG | 0.491508 | tig0020342:-106476 | None:intergenic |
| AACACAATCTATCTAGGGAA+TGG | 0.494679 | tig0020342:+111719 | Msa1380410:CDS |
| CTAACATTGGGATGTATGTA+TGG | 0.496674 | tig0020342:+114817 | Msa1380410:three_prime_UTR |
| TATGGTTGATCTCGTTGAAA+AGG | 0.497596 | tig0020342:-115214 | None:intergenic |
| TTACTTACATGTACGGGCAA+AGG | 0.498260 | tig0020342:+109457 | Msa1380410:CDS |
| CAAGGATTCCAAACTAACAT+TGG | 0.501620 | tig0020342:+114804 | Msa1380410:three_prime_UTR |
| TTAAATACAGGTAAAATGCT+AGG | 0.502823 | tig0020342:+112294 | Msa1380410:intron |
| ACCAATTAAAGCACTGGCCG+AGG | 0.503185 | tig0020342:+111685 | Msa1380410:CDS |
| GAAGCATCAGATCCATTGTC+AGG | 0.503948 | tig0020342:+112340 | Msa1380410:CDS |
| AGACTGAAGATCTAAATCAT+TGG | 0.509744 | tig0020342:-107237 | None:intergenic |
| AAGGATTCCAAACTAACATT+GGG | 0.510383 | tig0020342:+114805 | Msa1380410:three_prime_UTR |
| ATCTATCTAGGGAATGGGTC+TGG | 0.511093 | tig0020342:+111725 | Msa1380410:CDS |
| TCGCTGAATCAGGAACTTCA+AGG | 0.514181 | tig0020342:-109498 | None:intergenic |
| TCCTACCTCCTCCATGTTGG+AGG | 0.516563 | tig0020342:-114974 | None:intergenic |
| AGAAGTTTGCTTTATTTGGA+GGG | 0.524343 | tig0020342:+109605 | Msa1380410:CDS |
| GCTTTAACCTTGGACACACT+TGG | 0.529551 | tig0020342:+106497 | Msa1380410:CDS |
| TATAATTGATCATCTTTAGT+GGG | 0.530688 | tig0020342:-115191 | None:intergenic |
| ACACAATCTATCTAGGGAAT+GGG | 0.530689 | tig0020342:+111720 | Msa1380410:CDS |
| AATATGAAATTCCAGATGAA+GGG | 0.531290 | tig0020342:+114741 | Msa1380410:CDS |
| GTATAATTGATCATCTTTAG+TGG | 0.536771 | tig0020342:-115192 | None:intergenic |
| TGCTGGCACCAATAACCATC+AGG | 0.540640 | tig0020342:+110606 | Msa1380410:CDS |
| TGTATGGTGATTGGTGATGA+AGG | 0.542311 | tig0020342:+114833 | Msa1380410:three_prime_UTR |
| AGGGAATGGGTCTGGTGACA+TGG | 0.542984 | tig0020342:+111733 | Msa1380410:CDS |
| GATAAGACCAAGTGTGTCCA+AGG | 0.547203 | tig0020342:-106504 | None:intergenic |
| TTATGGTGAAGTTACTAGGA+TGG | 0.550902 | tig0020342:+114888 | Msa1380410:three_prime_UTR |
| TAGCTCAGGGTGCCTGACAA+TGG | 0.550961 | tig0020342:-112352 | None:intergenic |
| AGCGGATTCGCTACCAAGCA+AGG | 0.551373 | tig0020342:+114490 | Msa1380410:CDS |
| GACACACTTGGTCTTATCAA+AGG | 0.552595 | tig0020342:+106509 | Msa1380410:CDS |
| AGAAGGAGTGTGCTTTGTGC+TGG | 0.553507 | tig0020342:-106375 | None:intergenic |
| GAGGTCCCAAGGTAGTAGAT+AGG | 0.555775 | tig0020342:+106623 | Msa1380410:CDS |
| TTGATATATTCACACCTACC+TGG | 0.557164 | tig0020342:+110536 | Msa1380410:CDS |
| TGGGATGTATGTATGGTGAT+TGG | 0.565131 | tig0020342:+114824 | Msa1380410:three_prime_UTR |
| TCCCAAGGTAGTAGATAGGT+GGG | 0.565727 | tig0020342:+106627 | Msa1380410:CDS |
| GCACTGGCCGAGGATATAGA+TGG | 0.567128 | tig0020342:+111695 | Msa1380410:CDS |
| CAGCAACCCAACTACGGTGG+TGG | 0.570564 | tig0020342:-106422 | None:intergenic |
| GCTTCTGTTGATATACGTAC+AGG | 0.571055 | tig0020342:+111755 | Msa1380410:CDS |
| AGGTAGGTGTGAATATATCA+AGG | 0.573013 | tig0020342:-110534 | None:intergenic |
| GGTATTGCAGTTATTAGCTG+TGG | 0.574259 | tig0020342:+107038 | Msa1380410:intron |
| TATGAAAGAGATCACGGATG+GGG | 0.574536 | tig0020342:+114520 | Msa1380410:CDS |
| AAGAAGAAAACGTACCGGGT+TGG | 0.576937 | tig0020342:-106704 | None:intergenic |
| GCTACCACTGTAGAGTGCCC+TGG | 0.577472 | tig0020342:+106458 | Msa1380410:CDS |
| TGAGACACCAATTAAAGCAC+TGG | 0.577646 | tig0020342:+111679 | Msa1380410:CDS |
| CTCAGATACACCCAAAGGAG+CGG | 0.581212 | tig0020342:+114472 | Msa1380410:intron |
| AGAATCTTGAGTTTGAATCC+AGG | 0.582034 | tig0020342:+107300 | Msa1380410:CDS |
| AAATCCTACCTCCTCCATGT+TGG | 0.583159 | tig0020342:-114977 | None:intergenic |
| ACTATGAAAGAGATCACGGA+TGG | 0.583209 | tig0020342:+114518 | Msa1380410:CDS |
| CTATGAAAGAGATCACGGAT+GGG | 0.584420 | tig0020342:+114519 | Msa1380410:CDS |
| TGTGTTGCCATCTATATCCT+CGG | 0.585169 | tig0020342:-111702 | None:intergenic |
| GTCCCAAGGTAGTAGATAGG+TGG | 0.586983 | tig0020342:+106626 | Msa1380410:CDS |
| ATGGCAACACAATCTATCTA+GGG | 0.590346 | tig0020342:+111714 | Msa1380410:CDS |
| CGCTGAATCAGGAACTTCAA+GGG | 0.591335 | tig0020342:-109497 | None:intergenic |
| GTTAACCTCCAACATGGAGG+AGG | 0.599743 | tig0020342:+114969 | Msa1380410:three_prime_UTR |
| AAGACGGCGTCAAGAGACAA+AGG | 0.601694 | tig0020342:+114680 | Msa1380410:CDS |
| AAATGATGAACATGAGAAGA+CGG | 0.601744 | tig0020342:+114664 | Msa1380410:CDS |
| AGAAACTATGAAAGAGATCA+CGG | 0.602289 | tig0020342:+114514 | Msa1380410:CDS |
| CTACCTGTGGTAGCTTCATG+TGG | 0.603083 | tig0020342:+112372 | Msa1380410:CDS |
| CTAGAGAAACTCCAGTGACA+GGG | 0.603489 | tig0020342:-107199 | None:intergenic |
| TCCAAGGTTAAAGCTCTAAG+TGG | 0.603961 | tig0020342:-106488 | None:intergenic |
| ATATGAAACAGATGTGAACC+AGG | 0.611012 | tig0020342:-110554 | None:intergenic |
| ATGCAAAACATTGTTGAGAG+AGG | 0.622645 | tig0020342:+115164 | Msa1380410:three_prime_UTR |
| AAGGTGGTAAAAGTTCGAGC+AGG | 0.623070 | tig0020342:+114852 | Msa1380410:three_prime_UTR |
| CATTGATCGCAAATCCAACC+CGG | 0.624320 | tig0020342:+106690 | Msa1380410:CDS |
| GAAGAACACACAAAATCCAA+AGG | 0.629527 | tig0020342:+114641 | Msa1380410:CDS |
| CACTCTACAGTGGTAGCTCG+AGG | 0.631494 | tig0020342:-106452 | None:intergenic |
| CAGGCACCCTGAGCTACCTG+TGG | 0.634317 | tig0020342:+112359 | Msa1380410:CDS |
| AAGCTACCACAGGTAGCTCA+GGG | 0.640900 | tig0020342:-112365 | None:intergenic |
| ACAATAGTTAACCTCCAACA+TGG | 0.654062 | tig0020342:+114963 | Msa1380410:three_prime_UTR |
| AAGGTTAAAGCTCTAAGTGG+AGG | 0.655539 | tig0020342:-106485 | None:intergenic |
| GAAACAGATGTGAACCAGGT+AGG | 0.656614 | tig0020342:-110550 | None:intergenic |
| TGGTAACGTCTTGTGTTGCA+AGG | 0.665311 | tig0020342:+109570 | Msa1380410:CDS |
| ATTTACTCAGATACACCCAA+AGG | 0.670340 | tig0020342:+114467 | Msa1380410:intron |
| ACCTCCAACATGGAGGAGGT+AGG | 0.674644 | tig0020342:+114973 | Msa1380410:three_prime_UTR |
| TTGCAGCAACCCAACTACGG+TGG | 0.676543 | tig0020342:-106425 | None:intergenic |
| ATGGTGATTGGTGATGAAGG+TGG | 0.678783 | tig0020342:+114836 | Msa1380410:three_prime_UTR |
| TCACCACATGAAGCTACCAC+AGG | 0.684230 | tig0020342:-112375 | None:intergenic |
| CCCAAGGTAGTAGATAGGTG+GGG | 0.685917 | tig0020342:+106628 | Msa1380410:CDS |
| ACAACCAGGGCACTCTACAG+TGG | 0.689442 | tig0020342:-106462 | None:intergenic |
| GACTTTGGGATACAAAGACA+AGG | 0.696742 | tig0020342:+112763 | Msa1380410:CDS |
| CTCTAAGTGGAGGACAACCA+GGG | 0.698739 | tig0020342:-106475 | None:intergenic |
| ACTATAGGATATATACACCA+AGG | 0.701279 | tig0020342:+114786 | Msa1380410:three_prime_UTR |
| TTTATGACATATCTGCTCAG+AGG | 0.715403 | tig0020342:+111630 | Msa1380410:CDS |
| TAACGTCTTGTGTTGCAAGG+TGG | 0.722177 | tig0020342:+109573 | Msa1380410:CDS |
| ATAGTTAACCTCCAACATGG+AGG | 0.755401 | tig0020342:+114966 | Msa1380410:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCAATATTTCTTATTAAA+AGG | + | tig0020342:107124-107143 | Msa1380410:intron | 10.0% |
| !!! | AATTTTGTAAACTAATAATA+TGG | - | tig0020342:107534-107553 | None:intergenic | 10.0% |
| !! | TAGAAAATTAAACAAATAAA+AGG | - | tig0020342:107900-107919 | None:intergenic | 10.0% |
| !!! | CAATTTTTTTTTATAGTTTT+TGG | - | tig0020342:113788-113807 | None:intergenic | 10.0% |
| !!! | CAAAATTTTTTTATAGTTTT+TGG | - | tig0020342:113849-113868 | None:intergenic | 10.0% |
| !! | AATTATCAATTAATTAAAAG+GGG | + | tig0020342:114134-114153 | Msa1380410:intron | 10.0% |
| !! | CATAAATTATCAAAAAAACA+AGG | - | tig0020342:107335-107354 | None:intergenic | 15.0% |
| !! | TTAGTTTACAAAATTGTAAT+TGG | + | tig0020342:107539-107558 | Msa1380410:intron | 15.0% |
| !!! | TTTACTATTTTAAAGAGTTT+TGG | + | tig0020342:107928-107947 | Msa1380410:intron | 15.0% |
| !! | TATTTGTAATTCTATATTTG+TGG | + | tig0020342:109385-109404 | Msa1380410:intron | 15.0% |
| !! | ATTTGTAATTCTATATTTGT+GGG | + | tig0020342:109386-109405 | Msa1380410:intron | 15.0% |
| !!! | AAATGTTTCATTGTTATTTA+GGG | + | tig0020342:109426-109445 | Msa1380410:intron | 15.0% |
| !! | TTATAATTTACTTACATGTA+CGG | + | tig0020342:109450-109469 | Msa1380410:CDS | 15.0% |
| !!! | TTAAATAGTTTTGCATTTTA+TGG | + | tig0020342:109697-109716 | Msa1380410:intron | 15.0% |
| !!! | TCGTTAATCATTATTTTTTA+GGG | - | tig0020342:109796-109815 | None:intergenic | 15.0% |
| !!! | TTCGTTAATCATTATTTTTT+AGG | - | tig0020342:109797-109816 | None:intergenic | 15.0% |
| !!! | GATCTTTTTTTATATCTATA+AGG | - | tig0020342:109976-109995 | None:intergenic | 15.0% |
| !!! | TAAAAAATTTGAAATGAAGA+GGG | - | tig0020342:110399-110418 | None:intergenic | 15.0% |
| !!! | TCAAATTATATTTTATCAAG+AGG | + | tig0020342:110811-110830 | Msa1380410:intron | 15.0% |
| !!! | CAAATTATATTTTATCAAGA+GGG | + | tig0020342:110812-110831 | Msa1380410:intron | 15.0% |
| !!! | ACAAATTATATTTTATCAAG+AGG | + | tig0020342:110911-110930 | Msa1380410:intron | 15.0% |
| !!! | CAAATTATATTTTATCAAGA+GGG | + | tig0020342:110812-110831 | Msa1380410:intron | 15.0% |
| !!! | TGATTTGAAAAGAATATTTT+GGG | - | tig0020342:111147-111166 | None:intergenic | 15.0% |
| !!! | TTGATTTGAAAAGAATATTT+TGG | - | tig0020342:111148-111167 | None:intergenic | 15.0% |
| !!! | CATTAATATTAGTATTTTGA+GGG | - | tig0020342:112110-112129 | None:intergenic | 15.0% |
| !!! | ACATTAATATTAGTATTTTG+AGG | - | tig0020342:112111-112130 | None:intergenic | 15.0% |
| !!! | GCTATTATTTTATTAAATAC+AGG | + | tig0020342:112282-112301 | Msa1380410:intron | 15.0% |
| !!! | CATTAATTTCTTTTAGATTA+AGG | - | tig0020342:112884-112903 | None:intergenic | 15.0% |
| !! | TAAAAGAAATTAATGATATC+TGG | + | tig0020342:112889-112908 | Msa1380410:intron | 15.0% |
| !! | TATATTGCTTATTTGAATAT+CGG | + | tig0020342:112923-112942 | Msa1380410:intron | 15.0% |
| !!! | GTCATTTTGTTAAAAAAATA+TGG | + | tig0020342:113361-113380 | Msa1380410:intron | 15.0% |
| !! | AAAAAAATATGGCTAAAATA+TGG | + | tig0020342:113372-113391 | Msa1380410:intron | 15.0% |
| !! | CTATAAAAAAAAAATTTGCA+GGG | - | tig0020342:113436-113455 | None:intergenic | 15.0% |
| !! | ACTATAAAAAAAAAATTTGC+AGG | - | tig0020342:113437-113456 | None:intergenic | 15.0% |
| !! | CTATAAAAAAAAAATTTGCA+GGG | - | tig0020342:113436-113455 | None:intergenic | 15.0% |
| !! | ACTATAAAAAAAAAATTTGC+AGG | - | tig0020342:113437-113456 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAAATTGC+AGG | + | tig0020342:113789-113808 | Msa1380410:intron | 15.0% |
| !! | AACTATAAAAAAAAATTGCA+GGG | + | tig0020342:113790-113809 | Msa1380410:intron | 15.0% |
| !!! | AAACTATAAAAAAATTTTGC+AGG | + | tig0020342:113850-113869 | Msa1380410:intron | 15.0% |
| !!! | AACTATAAAAAAATTTTGCA+GGG | + | tig0020342:113851-113870 | Msa1380410:intron | 15.0% |
| !!! | AATATTTTTTGGCTAAAATA+TGG | - | tig0020342:113915-113934 | None:intergenic | 15.0% |
| !! | AATAAAGAAAATATGATAGA+TGG | + | tig0020342:114587-114606 | Msa1380410:CDS | 15.0% |
| !! | TTACAAAATTGTAATTGGTT+TGG | + | tig0020342:107544-107563 | Msa1380410:intron | 20.0% |
| !!! | TTGGTTTGGTTTTTTTTTTT+TGG | + | tig0020342:107558-107577 | Msa1380410:intron | 20.0% |
| !! | TAACATTTAAGTCAAGAATA+TGG | - | tig0020342:107629-107648 | None:intergenic | 20.0% |
| !!! | ATTCACTTTTAAAAAGAGAA+AGG | - | tig0020342:107829-107848 | None:intergenic | 20.0% |
| !!! | AATACTTTTTTGTTGTAAAC+TGG | - | tig0020342:108046-108065 | None:intergenic | 20.0% |
| !!! | AACTTTTAATCTTGTGTTTA+TGG | - | tig0020342:108139-108158 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAACCCTTAATG+AGG | + | tig0020342:108191-108210 | Msa1380410:intron | 20.0% |
| !!! | TCATATTGCATTCTTTTTAA+TGG | - | tig0020342:108948-108967 | None:intergenic | 20.0% |
| !!! | AAATTTTCAGAAATGCAAAT+GGG | - | tig0020342:109169-109188 | None:intergenic | 20.0% |
| !!! | AAAATTTTCAGAAATGCAAA+TGG | - | tig0020342:109170-109189 | None:intergenic | 20.0% |
| !! | AATTACAAATACATAATAGC+TGG | - | tig0020342:109376-109395 | None:intergenic | 20.0% |
| !!! | CAAATGTTTCATTGTTATTT+AGG | + | tig0020342:109425-109444 | Msa1380410:intron | 20.0% |
| !! | TATAATTTACTTACATGTAC+GGG | + | tig0020342:109451-109470 | Msa1380410:CDS | 20.0% |
| !!! | TTTTGCATTTTATGGTAAAA+AGG | + | tig0020342:109705-109724 | Msa1380410:intron | 20.0% |
| !!! | CAAATAAGTACTTTATTTGT+AGG | + | tig0020342:110298-110317 | Msa1380410:intron | 20.0% |
| !!! | CTAAAAAATTTGAAATGAAG+AGG | - | tig0020342:110400-110419 | None:intergenic | 20.0% |
| !!! | AATATATCAAGGCTATTTTT+AGG | - | tig0020342:110526-110545 | None:intergenic | 20.0% |
| !!! | ATCTTTTTCTTCATTTAGTT+TGG | - | tig0020342:110662-110681 | None:intergenic | 20.0% |
| !! | TAAATGAAGAAAAAGATCTT+TGG | + | tig0020342:110665-110684 | Msa1380410:intron | 20.0% |
| !! | TTAAACAACAGAAATATCAA+AGG | - | tig0020342:111072-111091 | None:intergenic | 20.0% |
| !!! | GATTTGAAAAGAATATTTTG+GGG | - | tig0020342:111146-111165 | None:intergenic | 20.0% |
| !! | AGAAATATATGCACAATATA+TGG | - | tig0020342:111275-111294 | None:intergenic | 20.0% |
| !! | TTTGTATTCAAACTGAAAAT+TGG | - | tig0020342:111341-111360 | None:intergenic | 20.0% |
| !!! | ATTTTCAGTTTGAATACAAA+AGG | + | tig0020342:111341-111360 | Msa1380410:intron | 20.0% |
| !! | AAACTATCATATTTACTTCA+TGG | - | tig0020342:111401-111420 | None:intergenic | 20.0% |
| !! | TTGTTAATAAAAAGGAGAAT+TGG | - | tig0020342:111451-111470 | None:intergenic | 20.0% |
| !! | TGTTTCATAAATTTAAGAAG+TGG | + | tig0020342:111800-111819 | Msa1380410:intron | 20.0% |
| !! | GTTATAAATTAGCTATTATC+TGG | + | tig0020342:111975-111994 | Msa1380410:intron | 20.0% |
| !!! | ATTTTTATCAGACTAAGAAA+GGG | - | tig0020342:112652-112671 | None:intergenic | 20.0% |
| !!! | TATTTTTATCAGACTAAGAA+AGG | - | tig0020342:112653-112672 | None:intergenic | 20.0% |
| !! | ATAAGCAATATAGTTTAGAA+TGG | - | tig0020342:112915-112934 | None:intergenic | 20.0% |
| !!! | AGTATTTTACTTGTGTTTTT+AGG | + | tig0020342:113230-113249 | Msa1380410:intron | 20.0% |
| !!! | CAAAAACAAAATTTTTTGCA+GGG | + | tig0020342:113761-113780 | Msa1380410:intron | 20.0% |
| !!! | ACAAGAACACAAATATTTTT+TGG | - | tig0020342:113926-113945 | None:intergenic | 20.0% |
| !!! | AGTCATAATCATATTTTGAT+TGG | + | tig0020342:113955-113974 | Msa1380410:intron | 20.0% |
| !! | AAAAGATCAGAATTGTATTA+GGG | - | tig0020342:114292-114311 | None:intergenic | 20.0% |
| !! | ATCTGAGTAAATAAAATTAG+TGG | - | tig0020342:114459-114478 | None:intergenic | 20.0% |
| !!! | AGTTGATGTTTCATATAATT+AGG | + | tig0020342:115092-115111 | Msa1380410:three_prime_UTR | 20.0% |
| !! | TATAATTGATCATCTTTAGT+GGG | - | tig0020342:115194-115213 | None:intergenic | 20.0% |
| ! | TTAGTACTACTTATAAGAGT+GGG | + | tig0020342:106844-106863 | Msa1380410:intron | 25.0% |
| ! | TTAAAAAGTTAATGATTCCC+CGG | + | tig0020342:106948-106967 | Msa1380410:intron | 25.0% |
| ! | TCTAAACTAAAAACTAGTAC+CGG | - | tig0020342:106970-106989 | None:intergenic | 25.0% |
| ! | AAGAATTTACGTTCATGAAA+AGG | - | tig0020342:106997-107016 | None:intergenic | 25.0% |
| !! | ATTATTTCCCTATGTTTTTC+TGG | + | tig0020342:107017-107036 | Msa1380410:intron | 25.0% |
| ! | TAAATAAATACTGCAGATTG+AGG | + | tig0020342:107169-107188 | Msa1380410:intron | 25.0% |
| ! | TCTGAAGAGAATAATGTTAT+TGG | + | tig0020342:107257-107276 | Msa1380410:CDS | 25.0% |
| !!! | AAAACAAGGTTTTATATACC+TGG | - | tig0020342:107321-107340 | None:intergenic | 25.0% |
| !!! | CAAAGTTTTGTGCTATTTTT+AGG | + | tig0020342:107401-107420 | Msa1380410:intron | 25.0% |
| ! | GGTAACACTAAATATATGAT+TGG | - | tig0020342:107594-107613 | None:intergenic | 25.0% |
| !! | AATTTTTCCTGCTTGAAATA+GGG | + | tig0020342:108880-108899 | Msa1380410:intron | 25.0% |
| ! | AATATGAATGAGTTTAAGCA+GGG | - | tig0020342:108972-108991 | None:intergenic | 25.0% |
| ! | TATCCATTTATGATTTCTCT+AGG | - | tig0020342:109039-109058 | None:intergenic | 25.0% |
| ! | AAATGGGAACACATTAAAAA+TGG | - | tig0020342:109153-109172 | None:intergenic | 25.0% |
| !! | AATTTTCTGCAAAAGTTTCT+TGG | + | tig0020342:109184-109203 | Msa1380410:intron | 25.0% |
| ! | ATGATCTGTAAGTTATTAAG+TGG | + | tig0020342:109224-109243 | Msa1380410:intron | 25.0% |
| ! | TGATCTGTAAGTTATTAAGT+GGG | + | tig0020342:109225-109244 | Msa1380410:intron | 25.0% |
| !! | AATGAGAAGTTTGCTTTATT+TGG | + | tig0020342:109601-109620 | Msa1380410:CDS | 25.0% |
| !!! | TTTTATGATTTGCATGATGT+AGG | + | tig0020342:109633-109652 | Msa1380410:intron | 25.0% |
| !!! | AGATATTCTTACTGATTTTG+TGG | + | tig0020342:109946-109965 | Msa1380410:intron | 25.0% |
| !! | CTTCGATAATAGAATCATTT+TGG | - | tig0020342:110031-110050 | None:intergenic | 25.0% |
| !! | AAGTACTTTATTTGTAGGAA+AGG | + | tig0020342:110303-110322 | Msa1380410:intron | 25.0% |
| ! | AAAATTAGTAAAACCAAGCT+TGG | - | tig0020342:110485-110504 | None:intergenic | 25.0% |
| ! | TCATGCATAAATATACTTTG+TGG | - | tig0020342:110953-110972 | None:intergenic | 25.0% |
| ! | CTCAAATTTATAATACGTGA+AGG | + | tig0020342:111178-111197 | Msa1380410:intron | 25.0% |
| ! | CCTCATCTTTGTTAATAAAA+AGG | - | tig0020342:111459-111478 | None:intergenic | 25.0% |
| !! | CCTTTTTATTAACAAAGATG+AGG | + | tig0020342:111456-111475 | Msa1380410:intron | 25.0% |
| !! | AAACATTTCCATAACTTTTG+GGG | - | tig0020342:111785-111804 | None:intergenic | 25.0% |
| !! | GAAACATTTCCATAACTTTT+GGG | - | tig0020342:111786-111805 | None:intergenic | 25.0% |
| !! | TGAAACATTTCCATAACTTT+TGG | - | tig0020342:111787-111806 | None:intergenic | 25.0% |
| ! | CAAAACAAAGTCATTCAAAA+AGG | - | tig0020342:112263-112282 | None:intergenic | 25.0% |
| ! | TTAAATACAGGTAAAATGCT+AGG | + | tig0020342:112294-112313 | Msa1380410:intron | 25.0% |
| !! | TAAAATGCTAGGATGTTTTA+CGG | + | tig0020342:112305-112324 | Msa1380410:CDS | 25.0% |
| !!! | CAATTGTTTTTTTGTTTACC+TGG | + | tig0020342:112503-112522 | Msa1380410:intron | 25.0% |
| !!! | CATATAATCGCTATTTTTCT+AGG | + | tig0020342:112723-112742 | Msa1380410:intron | 25.0% |
| !!! | GTATTGATTAAATCCATGTT+TGG | + | tig0020342:112986-113005 | Msa1380410:intron | 25.0% |
| !!! | GAAAATAGTTGTTATTTGTG+AGG | + | tig0020342:113050-113069 | Msa1380410:intron | 25.0% |
| ! | TAACAGATGCACATTATTAA+AGG | - | tig0020342:113336-113355 | None:intergenic | 25.0% |
| ! | ATATGGCTAAAATATGGTAT+TGG | + | tig0020342:113378-113397 | Msa1380410:intron | 25.0% |
| !!! | CAAAACTGACTTATTTTGTT+GGG | - | tig0020342:113405-113424 | None:intergenic | 25.0% |
| !! | CCAAAAACAAAAATTTTGCA+GGG | - | tig0020342:113530-113549 | None:intergenic | 25.0% |
| !! | TCCAAAAACAAAAATTTTGC+AGG | - | tig0020342:113531-113550 | None:intergenic | 25.0% |
| ! | TGACAAATCATCACATAATT+GGG | - | tig0020342:113567-113586 | None:intergenic | 25.0% |
| !!! | CCTGCAAAAAATTTTGTTTT+TGG | - | tig0020342:113763-113782 | None:intergenic | 25.0% |
| !!! | CCAAAAACAAAATTTTTTGC+AGG | + | tig0020342:113760-113779 | Msa1380410:intron | 25.0% |
| !!! | TTTTGGCTAAAATATGGTAT+TGG | - | tig0020342:113909-113928 | None:intergenic | 25.0% |
| !!! | TCAATGTTGTATTTTTTGTG+AGG | + | tig0020342:114075-114094 | Msa1380410:intron | 25.0% |
| ! | ACTTGTAGAATTTAGTTAGA+GGG | + | tig0020342:114196-114215 | Msa1380410:intron | 25.0% |
| ! | CAAAAGATCAGAATTGTATT+AGG | - | tig0020342:114293-114312 | None:intergenic | 25.0% |
| !! | CTAATACAATTCTGATCTTT+TGG | + | tig0020342:114291-114310 | Msa1380410:intron | 25.0% |
| ! | ATATTGTTTCCAGATATCTT+TGG | + | tig0020342:114400-114419 | Msa1380410:intron | 25.0% |
| ! | CTTAATTAACCAAAGATATC+TGG | - | tig0020342:114412-114431 | None:intergenic | 25.0% |
| ! | TTGGTTAATTAAGTTCAGTA+CGG | + | tig0020342:114419-114438 | Msa1380410:intron | 25.0% |
| !!! | GATGACTTTTTTCTTTTCAA+AGG | - | tig0020342:114563-114582 | None:intergenic | 25.0% |
| ! | TAAAAAAAAGAAAAGAGCCA+AGG | + | tig0020342:114613-114632 | Msa1380410:CDS | 25.0% |
| ! | AAATATGAAATTCCAGATGA+AGG | + | tig0020342:114740-114759 | Msa1380410:CDS | 25.0% |
| ! | AATATGAAATTCCAGATGAA+GGG | + | tig0020342:114741-114760 | Msa1380410:CDS | 25.0% |
| !! | TTAGCTGGATTTTATACTAT+AGG | + | tig0020342:114771-114790 | Msa1380410:three_prime_UTR | 25.0% |
| ! | GTATAATTGATCATCTTTAG+TGG | - | tig0020342:115195-115214 | None:intergenic | 25.0% |
| !! | AGATCAATCATATTAGTCTA+TGG | - | tig0020342:115235-115254 | None:intergenic | 25.0% |
| AAGAGAAAGAAGAAAGAGTA+AGG | - | tig0020342:106574-106593 | None:intergenic | 30.0% | |
| ! | TCTTTCTCTGCAATCATTTT+TGG | + | tig0020342:106723-106742 | Msa1380410:intron | 30.0% |
| ! | CGGTGTAAATCTATTTTACA+CGG | + | tig0020342:106776-106795 | Msa1380410:intron | 30.0% |
| GTTAGTACTACTTATAAGAG+TGG | + | tig0020342:106843-106862 | Msa1380410:intron | 30.0% | |
| TACTTATAAGAGTGGGATAA+CGG | + | tig0020342:106851-106870 | Msa1380410:intron | 30.0% | |
| TAAACTAAAAACTAGTACCG+GGG | - | tig0020342:106968-106987 | None:intergenic | 30.0% | |
| CTAAACTAAAAACTAGTACC+GGG | - | tig0020342:106969-106988 | None:intergenic | 30.0% | |
| TGCAATACCAGAAAAACATA+GGG | - | tig0020342:107027-107046 | None:intergenic | 30.0% | |
| AGACTGAAGATCTAAATCAT+TGG | - | tig0020342:107240-107259 | None:intergenic | 30.0% | |
| AAACTTTGACGTATATCCTA+TGG | - | tig0020342:107389-107408 | None:intergenic | 30.0% | |
| AGAACTTGTCCAAAGAAATA+GGG | - | tig0020342:107493-107512 | None:intergenic | 30.0% | |
| TAGAACTTGTCCAAAGAAAT+AGG | - | tig0020342:107494-107513 | None:intergenic | 30.0% | |
| AGAGATTAATCAAACCACAA+TGG | - | tig0020342:108003-108022 | None:intergenic | 30.0% | |
| AAAACCCTTAATGAGGAAAT+TGG | + | tig0020342:108198-108217 | Msa1380410:intron | 30.0% | |
| AAACCCTTAATGAGGAAATT+GGG | + | tig0020342:108199-108218 | Msa1380410:intron | 30.0% | |
| AACTTTCAATACAACAGAAG+AGG | + | tig0020342:108276-108295 | Msa1380410:intron | 30.0% | |
| TATATTTAGCGTATCACTCT+GGG | - | tig0020342:108397-108416 | None:intergenic | 30.0% | |
| ATATATTTAGCGTATCACTC+TGG | - | tig0020342:108398-108417 | None:intergenic | 30.0% | |
| CAAATTTAATCAACCGTTTC+TGG | + | tig0020342:108421-108440 | Msa1380410:intron | 30.0% | |
| ! | ATCTTCATCTTTTCCAGAAA+CGG | - | tig0020342:108437-108456 | None:intergenic | 30.0% |
| ACAAGATTGAAAGTTGTCAA+TGG | - | tig0020342:108681-108700 | None:intergenic | 30.0% | |
| ! | AACTTTCAATCTTGTGCTTT+TGG | + | tig0020342:108686-108705 | Msa1380410:intron | 30.0% |
| ACCATGATGAAAGTTGTAAA+TGG | + | tig0020342:108747-108766 | Msa1380410:intron | 30.0% | |
| TCCATTTACAACTTTCATCA+TGG | - | tig0020342:108751-108770 | None:intergenic | 30.0% | |
| TAAAAGATACTGAAGTAGAG+AGG | + | tig0020342:108823-108842 | Msa1380410:intron | 30.0% | |
| ! | CAATTTTTCCTGCTTGAAAT+AGG | + | tig0020342:108879-108898 | Msa1380410:intron | 30.0% |
| GAATATGAATGAGTTTAAGC+AGG | - | tig0020342:108973-108992 | None:intergenic | 30.0% | |
| GGTTCAAATTGCTTTAACTA+GGG | - | tig0020342:109018-109037 | None:intergenic | 30.0% | |
| AGGTTCAAATTGCTTTAACT+AGG | - | tig0020342:109019-109038 | None:intergenic | 30.0% | |
| GAACCTAGAGAAATCATAAA+TGG | + | tig0020342:109033-109052 | Msa1380410:intron | 30.0% | |
| GCGAGCAAATTATAATGATA+TGG | - | tig0020342:109082-109101 | None:intergenic | 30.0% | |
| TAAAAATGGTGCATATGACA+GGG | - | tig0020342:109139-109158 | None:intergenic | 30.0% | |
| TTAAAAATGGTGCATATGAC+AGG | - | tig0020342:109140-109159 | None:intergenic | 30.0% | |
| GTTTGCACTTATGTATGTAT+TGG | + | tig0020342:109348-109367 | Msa1380410:intron | 30.0% | |
| ATGAAACATTTGAATGATGC+TGG | - | tig0020342:109417-109436 | None:intergenic | 30.0% | |
| !! | AGAAGTTTGCTTTATTTGGA+GGG | + | tig0020342:109605-109624 | Msa1380410:CDS | 30.0% |
| AAAAAGGAAAGAAAGAGTGA+AGG | + | tig0020342:109721-109740 | Msa1380410:intron | 30.0% | |
| AAGGATATTCAACTACTAGA+GGG | + | tig0020342:109740-109759 | Msa1380410:intron | 30.0% | |
| AAGAATATCTGCAGTACTAT+AGG | - | tig0020342:109936-109955 | None:intergenic | 30.0% | |
| TAATTCATGTTTCAGCAGTA+AGG | - | tig0020342:110093-110112 | None:intergenic | 30.0% | |
| TTCTTGAAGGTTATGGTAAA+GGG | - | tig0020342:110216-110235 | None:intergenic | 30.0% | |
| ATTCTTGAAGGTTATGGTAA+AGG | - | tig0020342:110217-110236 | None:intergenic | 30.0% | |
| GTTTAGATTCTTGAAGGTTA+TGG | - | tig0020342:110223-110242 | None:intergenic | 30.0% | |
| !!! | CGTTTTGTTTAGATTCTTGA+AGG | - | tig0020342:110229-110248 | None:intergenic | 30.0% |
| !! | TTTGTTATTTCTCATGTGTC+AGG | - | tig0020342:110282-110301 | None:intergenic | 30.0% |
| !! | AAGGCGTTGAAGTTAATATT+TGG | + | tig0020342:110322-110341 | Msa1380410:CDS | 30.0% |
| !! | AGGCGTTGAAGTTAATATTT+GGG | + | tig0020342:110323-110342 | Msa1380410:CDS | 30.0% |
| !! | CGTTTTAGCATAAGATAAAG+TGG | - | tig0020342:110443-110462 | None:intergenic | 30.0% |
| !!! | GTTTTTTGTTTTACCAAGCT+TGG | + | tig0020342:110469-110488 | Msa1380410:intron | 30.0% |
| !!! | ATATCAAGGCTATTTTTAGG+AGG | - | tig0020342:110523-110542 | None:intergenic | 30.0% |
| !! | TAAAAGTACCTGATGGTTAT+TGG | - | tig0020342:110617-110636 | None:intergenic | 30.0% |
| ! | TATATTTTATCAAGAGGGAG+TGG | + | tig0020342:110817-110836 | Msa1380410:intron | 30.0% |
| ATTAATAACCACTCTCAATC+TGG | + | tig0020342:110874-110893 | Msa1380410:intron | 30.0% | |
| ! | TATATTTTATCAAGAGGGAG+TGG | + | tig0020342:110817-110836 | Msa1380410:intron | 30.0% |
| GCATGAATACTTTATTGTCA+TGG | + | tig0020342:110967-110986 | Msa1380410:intron | 30.0% | |
| ATATGGTAGAGAGAAACAAT+GGG | - | tig0020342:111258-111277 | None:intergenic | 30.0% | |
| TATATGGTAGAGAGAAACAA+TGG | - | tig0020342:111259-111278 | None:intergenic | 30.0% | |
| CACACATATATATGTAGACA+CGG | - | tig0020342:111318-111337 | None:intergenic | 30.0% | |
| TGAGGAGAATGAGAATAATA+TGG | + | tig0020342:111474-111493 | Msa1380410:intron | 30.0% | |
| ! | AACATTTCCATAACTTTTGG+GGG | - | tig0020342:111784-111803 | None:intergenic | 30.0% |
| CATTTCATTTGTCTTCTAGT+TGG | + | tig0020342:112237-112256 | Msa1380410:intron | 30.0% | |
| ! | AAAATGCTAGGATGTTTTAC+GGG | + | tig0020342:112306-112325 | Msa1380410:CDS | 30.0% |
| AAAGAACATGCAACACATAA+GGG | - | tig0020342:112418-112437 | None:intergenic | 30.0% | |
| TCATTGATGAAGTCTTGAAT+TGG | + | tig0020342:112454-112473 | Msa1380410:intron | 30.0% | |
| ! | TAAGATTATAATTTGGCTCC+AGG | - | tig0020342:112524-112543 | None:intergenic | 30.0% |
| GATTATATGAGTAATAGTGG+TGG | - | tig0020342:112712-112731 | None:intergenic | 30.0% | |
| AGCGATTATATGAGTAATAG+TGG | - | tig0020342:112715-112734 | None:intergenic | 30.0% | |
| TCTGAAAAGGACAAAGAAAA+AGG | - | tig0020342:112817-112836 | None:intergenic | 30.0% | |
| ! | TAGCAATAGCAATTCTGAAA+AGG | - | tig0020342:112830-112849 | None:intergenic | 30.0% |
| ! | ACTAATAGACTTTAGCTCAT+AGG | - | tig0020342:112958-112977 | None:intergenic | 30.0% |
| ACAATATCTTTCTCCAAACA+TGG | - | tig0020342:113002-113021 | None:intergenic | 30.0% | |
| TTTGTGAGGTTAGTAAAAAG+AGG | + | tig0020342:113064-113083 | Msa1380410:intron | 30.0% | |
| TTGTGAGGTTAGTAAAAAGA+GGG | + | tig0020342:113065-113084 | Msa1380410:intron | 30.0% | |
| AGTCATTTACATGTGTTTCT+AGG | - | tig0020342:113131-113150 | None:intergenic | 30.0% | |
| TAAATGACTAAAAAACCCAG+CGG | + | tig0020342:113142-113161 | Msa1380410:intron | 30.0% | |
| AAAACAACTATGACAGTCAT+TGG | - | tig0020342:113310-113329 | None:intergenic | 30.0% | |
| !!! | CCAAAACTGACTTATTTTGT+TGG | - | tig0020342:113406-113425 | None:intergenic | 30.0% |
| ! | CCAACAAAATAAGTCAGTTT+TGG | + | tig0020342:113403-113422 | Msa1380410:intron | 30.0% |
| !!! | AAAACTGACCTATTTTTGCA+GGG | - | tig0020342:113467-113486 | None:intergenic | 30.0% |
| !!! | CCCTGCAAAATTTTTGTTTT+TGG | + | tig0020342:113527-113546 | Msa1380410:intron | 30.0% |
| GACAAATCATCACATAATTG+GGG | - | tig0020342:113566-113585 | None:intergenic | 30.0% | |
| GTGACAAATCATCACATAAT+TGG | - | tig0020342:113568-113587 | None:intergenic | 30.0% | |
| TGACAAATCATCACATAACT+GGG | + | tig0020342:113723-113742 | Msa1380410:intron | 30.0% | |
| !!! | ATCATATTTTGATTGGTTGC+AGG | + | tig0020342:113962-113981 | Msa1380410:intron | 30.0% |
| TCAAAAAGAACATGCAGAAT+AGG | - | tig0020342:114002-114021 | None:intergenic | 30.0% | |
| GATTCCAATTTCATTGTTGA+AGG | + | tig0020342:114020-114039 | Msa1380410:CDS | 30.0% | |
| CTAACCTTCAACAATGAAAT+TGG | - | tig0020342:114027-114046 | None:intergenic | 30.0% | |
| CACTTGTAGAATTTAGTTAG+AGG | + | tig0020342:114195-114214 | Msa1380410:intron | 30.0% | |
| CTTGTAGAATTTAGTTAGAG+GGG | + | tig0020342:114197-114216 | Msa1380410:intron | 30.0% | |
| TACAATATGAAGAAACAGCT+AGG | - | tig0020342:114373-114392 | None:intergenic | 30.0% | |
| AGAAACTATGAAAGAGATCA+CGG | + | tig0020342:114514-114533 | Msa1380410:CDS | 30.0% | |
| AAATGATGAACATGAGAAGA+CGG | + | tig0020342:114664-114683 | Msa1380410:CDS | 30.0% | |
| ACTATAGGATATATACACCA+AGG | + | tig0020342:114786-114805 | Msa1380410:three_prime_UTR | 30.0% | |
| AAGGATTCCAAACTAACATT+GGG | + | tig0020342:114805-114824 | Msa1380410:three_prime_UTR | 30.0% | |
| TACTTTATGGTGAAGTTACT+AGG | + | tig0020342:114884-114903 | Msa1380410:three_prime_UTR | 30.0% | |
| ! | ACAGTCAATCCTATTTTCTT+AGG | + | tig0020342:115020-115039 | Msa1380410:three_prime_UTR | 30.0% |
| ! | ATTTTCACGCCTAAGAAAAT+AGG | - | tig0020342:115032-115051 | None:intergenic | 30.0% |
| !! | TTAACGGACTTAGTTGAATC+GGG | - | tig0020342:106658-106677 | None:intergenic | 35.0% |
| !! | GTTAACGGACTTAGTTGAAT+CGG | - | tig0020342:106659-106678 | None:intergenic | 35.0% |
| AATGAGTGAAACAGCGTTAA+CGG | - | tig0020342:106674-106693 | None:intergenic | 35.0% | |
| AGAGAAAGAAGAAAACGTAC+CGG | - | tig0020342:106712-106731 | None:intergenic | 35.0% | |
| ! | TTTGGTGTAATTCACTTCTG+AGG | + | tig0020342:106741-106760 | Msa1380410:intron | 35.0% |
| TTGGTGTAATTCACTTCTGA+GGG | + | tig0020342:106742-106761 | Msa1380410:intron | 35.0% | |
| ACTTATAAGAGTGGGATAAC+GGG | + | tig0020342:106852-106871 | Msa1380410:intron | 35.0% | |
| ! | ATTGCTACTTCCAGCTTTAA+AGG | - | tig0020342:106929-106948 | None:intergenic | 35.0% |
| CTGCAATACCAGAAAAACAT+AGG | - | tig0020342:107028-107047 | None:intergenic | 35.0% | |
| TTAGCTGTGGCAAGAAAAAA+TGG | + | tig0020342:107051-107070 | Msa1380410:CDS | 35.0% | |
| TGGATTCAAACTCAAGATTC+TGG | - | tig0020342:107301-107320 | None:intergenic | 35.0% | |
| AGAATCTTGAGTTTGAATCC+AGG | + | tig0020342:107300-107319 | Msa1380410:CDS | 35.0% | |
| TATTGTTGTGTGAATGCCAT+AGG | + | tig0020342:107370-107389 | Msa1380410:intron | 35.0% | |
| TAGTCTCACAACTATCTAGA+AGG | - | tig0020342:107456-107475 | None:intergenic | 35.0% | |
| TAGATAGTTGTGAGACTACT+TGG | + | tig0020342:107458-107477 | Msa1380410:intron | 35.0% | |
| AGATAGTTGTGAGACTACTT+GGG | + | tig0020342:107459-107478 | Msa1380410:intron | 35.0% | |
| ! | GTTATATGGCCCTATTTCTT+TGG | + | tig0020342:107481-107500 | Msa1380410:intron | 35.0% |
| AGAATATGGTCGATGGTAAT+TGG | - | tig0020342:107615-107634 | None:intergenic | 35.0% | |
| TAAGTCAAGAATATGGTCGA+TGG | - | tig0020342:107622-107641 | None:intergenic | 35.0% | |
| CTTGTTTAAGTACTTTGCGT+AGG | + | tig0020342:107714-107733 | Msa1380410:intron | 35.0% | |
| TAATCTCTACAATTGCGCTT+AGG | + | tig0020342:108015-108034 | Msa1380410:intron | 35.0% | |
| TCCAATTACAACCTTCATCA+TGG | + | tig0020342:108075-108094 | Msa1380410:intron | 35.0% | |
| ACCATGATGAAGGTTGTAAT+TGG | - | tig0020342:108079-108098 | None:intergenic | 35.0% | |
| !! | AGATGGATTGTGTTTGCATT+TGG | - | tig0020342:108109-108128 | None:intergenic | 35.0% |
| GTGTTTATGGACATATGAGA+TGG | - | tig0020342:108126-108145 | None:intergenic | 35.0% | |
| CTTCCCAATTTCCTCATTAA+GGG | - | tig0020342:108205-108224 | None:intergenic | 35.0% | |
| TCTTCCCAATTTCCTCATTA+AGG | - | tig0020342:108206-108225 | None:intergenic | 35.0% | |
| TAATGAGGAAATTGGGAAGA+TGG | + | tig0020342:108206-108225 | Msa1380410:intron | 35.0% | |
| AATGAGGAAATTGGGAAGAT+GGG | + | tig0020342:108207-108226 | Msa1380410:intron | 35.0% | |
| TGAAAGTTTCCAACCATTCA+CGG | - | tig0020342:108264-108283 | None:intergenic | 35.0% | |
| ACTATAGTTGCTTGCTTGAA+TGG | - | tig0020342:108484-108503 | None:intergenic | 35.0% | |
| AGAGGCTTCAAAAGCTTATA+AGG | - | tig0020342:108557-108576 | None:intergenic | 35.0% | |
| TCTTTACAGGTACCTCTAAT+CGG | + | tig0020342:108574-108593 | Msa1380410:intron | 35.0% | |
| AATTGCTTTAACTAGGGATC+AGG | - | tig0020342:109012-109031 | None:intergenic | 35.0% | |
| AAAAATGGTGCATATGACAG+GGG | - | tig0020342:109138-109157 | None:intergenic | 35.0% | |
| TGCAAAAGTTTCTTGGACAA+TGG | + | tig0020342:109191-109210 | Msa1380410:intron | 35.0% | |
| ACCTGGAATGTTTGTAATAG+TGG | + | tig0020342:109550-109569 | Msa1380410:CDS | 35.0% | |
| ACCACTATTACAAACATTCC+AGG | - | tig0020342:109554-109573 | None:intergenic | 35.0% | |
| !! | GAGAAGTTTGCTTTATTTGG+AGG | + | tig0020342:109604-109623 | Msa1380410:CDS | 35.0% |
| GAATGCACATGACTATTGAA+CGG | + | tig0020342:109673-109692 | Msa1380410:intron | 35.0% | |
| GAAGGATATTCAACTACTAG+AGG | + | tig0020342:109739-109758 | Msa1380410:intron | 35.0% | |
| GCTTCTGTCGTAGAAAATAA+CGG | - | tig0020342:109840-109859 | None:intergenic | 35.0% | |
| ! | TTATTTTCTACGACAGAAGC+AGG | + | tig0020342:109840-109859 | Msa1380410:intron | 35.0% |
| ! | TATTTTCTACGACAGAAGCA+GGG | + | tig0020342:109841-109860 | Msa1380410:intron | 35.0% |
| ATATGGCAGCATAAGCTATA+CGG | - | tig0020342:109904-109923 | None:intergenic | 35.0% | |
| ACTATAGGAGTCTGGAAATA+TGG | - | tig0020342:109921-109940 | None:intergenic | 35.0% | |
| ! | GAAGTGTTATCTGTCACAAA+GGG | - | tig0020342:110007-110026 | None:intergenic | 35.0% |
| ! | TGAAGTGTTATCTGTCACAA+AGG | - | tig0020342:110008-110027 | None:intergenic | 35.0% |
| ! | TTTGAAATGAAGAGGGTTCA+TGG | - | tig0020342:110392-110411 | None:intergenic | 35.0% |
| AGGTAGGTGTGAATATATCA+AGG | - | tig0020342:110537-110556 | None:intergenic | 35.0% | |
| TTGATATATTCACACCTACC+TGG | + | tig0020342:110536-110555 | Msa1380410:CDS | 35.0% | |
| ATATGAAACAGATGTGAACC+AGG | - | tig0020342:110557-110576 | None:intergenic | 35.0% | |
| !! | CACTGATTAAAAGTACCTGA+TGG | - | tig0020342:110624-110643 | None:intergenic | 35.0% |
| GAAGTATATCAGCATCAAAG+AGG | - | tig0020342:110712-110731 | None:intergenic | 35.0% | |
| GATGCTGATATACTTCAACT+AGG | + | tig0020342:110716-110735 | Msa1380410:intron | 35.0% | |
| ACTTCAACTAGGTGTATTAG+AGG | + | tig0020342:110727-110746 | Msa1380410:intron | 35.0% | |
| CTTCAACTAGGTGTATTAGA+GGG | + | tig0020342:110728-110747 | Msa1380410:intron | 35.0% | |
| TGTACTAGAGATGTTTGAGA+AGG | + | tig0020342:110851-110870 | Msa1380410:intron | 35.0% | |
| ATAGCCAATCTTTCATGCAA+AGG | + | tig0020342:110993-111012 | Msa1380410:intron | 35.0% | |
| CAATCCTTTGCATGAAAGAT+TGG | - | tig0020342:111000-111019 | None:intergenic | 35.0% | |
| !! | GAATATTTTGGGGACTCTTT+GGG | - | tig0020342:111136-111155 | None:intergenic | 35.0% |
| !! | AGAATATTTTGGGGACTCTT+TGG | - | tig0020342:111137-111156 | None:intergenic | 35.0% |
| !! | ATGTAGACACGGCTTTAAAA+AGG | - | tig0020342:111307-111326 | None:intergenic | 35.0% |
| !! | TACTCTTCCATTTTTAACGC+TGG | + | tig0020342:111588-111607 | Msa1380410:intron | 35.0% |
| TCTGAGCAGATATGTCATAA+AGG | - | tig0020342:111631-111650 | None:intergenic | 35.0% | |
| TTTATGACATATCTGCTCAG+AGG | + | tig0020342:111630-111649 | Msa1380410:CDS | 35.0% | |
| CGAAAATCAATAGAGAGAAC+AGG | - | tig0020342:111659-111678 | None:intergenic | 35.0% | |
| ATGGCAACACAATCTATCTA+GGG | + | tig0020342:111714-111733 | Msa1380410:CDS | 35.0% | |
| AACACAATCTATCTAGGGAA+TGG | + | tig0020342:111719-111738 | Msa1380410:CDS | 35.0% | |
| ACACAATCTATCTAGGGAAT+GGG | + | tig0020342:111720-111739 | Msa1380410:CDS | 35.0% | |
| ! | ACATTTCCATAACTTTTGGG+GGG | - | tig0020342:111783-111802 | None:intergenic | 35.0% |
| CAGTTACAGATGGAAAAATG+AGG | - | tig0020342:111894-111913 | None:intergenic | 35.0% | |
| CCAAAATGTTCAGTTACAGA+TGG | - | tig0020342:111904-111923 | None:intergenic | 35.0% | |
| ! | CCATCTGTAACTGAACATTT+TGG | + | tig0020342:111901-111920 | Msa1380410:intron | 35.0% |
| AAATTAGCTATTATCTGGCG+AGG | + | tig0020342:111980-111999 | Msa1380410:intron | 35.0% | |
| AATTAGCTATTATCTGGCGA+GGG | + | tig0020342:111981-112000 | Msa1380410:intron | 35.0% | |
| GTAATTAAGATGAGCCTTTG+TGG | + | tig0020342:112129-112148 | Msa1380410:intron | 35.0% | |
| CATCAAAGAAAAAGCCACAA+AGG | - | tig0020342:112146-112165 | None:intergenic | 35.0% | |
| AGAGACAATTGATTGTCAAC+TGG | + | tig0020342:112169-112188 | Msa1380410:intron | 35.0% | |
| GAAAGAACATGCAACACATA+AGG | - | tig0020342:112419-112438 | None:intergenic | 35.0% | |
| TTCAGAAGAAATCATGCTCA+AGG | - | tig0020342:112564-112583 | None:intergenic | 35.0% | |
| !!! | AATCGCTATTTTTCTAGGAC+TGG | + | tig0020342:112728-112747 | Msa1380410:intron | 35.0% |
| ! | AAGAGGGTACATTTGTAAGA+TGG | + | tig0020342:113081-113100 | Msa1380410:intron | 35.0% |
| !!! | GTTTTCTAGTTATAAGCCAG+CGG | + | tig0020342:113181-113200 | Msa1380410:intron | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | + | tig0020342:113456-113475 | Msa1380410:intron | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | - | tig0020342:113468-113487 | None:intergenic | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | + | tig0020342:113466-113485 | Msa1380410:intron | 35.0% |
| !!! | TTGTCACTTTTGTGCATATG+TGG | + | tig0020342:113581-113600 | Msa1380410:intron | 35.0% |
| GTGACAAATCATCACATAAC+TGG | + | tig0020342:113722-113741 | Msa1380410:intron | 35.0% | |
| GACAAATCATCACATAACTG+GGG | + | tig0020342:113724-113743 | Msa1380410:intron | 35.0% | |
| !!! | AAAACTGGCCTATTTTTGCT+GGG | + | tig0020342:113822-113841 | Msa1380410:intron | 35.0% |
| !! | TTTTTGGTCCCAGCAAAAAT+AGG | - | tig0020342:113833-113852 | None:intergenic | 35.0% |
| AGGGAAATCTGAAGAGAAAA+CGG | - | tig0020342:114273-114292 | None:intergenic | 35.0% | |
| TTCTTTCTGCCTTAAATGCA+TGG | + | tig0020342:114347-114366 | Msa1380410:intron | 35.0% | |
| ATTTACTCAGATACACCCAA+AGG | + | tig0020342:114467-114486 | Msa1380410:intron | 35.0% | |
| TTCATAGTTTCTTCCTTGCT+TGG | - | tig0020342:114506-114525 | None:intergenic | 35.0% | |
| GAAGAACACACAAAATCCAA+AGG | + | tig0020342:114641-114660 | Msa1380410:CDS | 35.0% | |
| CTCATGTTCATCATTTCCTT+TGG | - | tig0020342:114660-114679 | None:intergenic | 35.0% | |
| ! | CAATGTTAGTTTGGAATCCT+TGG | - | tig0020342:114806-114825 | None:intergenic | 35.0% |
| CAAGGATTCCAAACTAACAT+TGG | + | tig0020342:114804-114823 | Msa1380410:three_prime_UTR | 35.0% | |
| CATACATCCCAATGTTAGTT+TGG | - | tig0020342:114815-114834 | None:intergenic | 35.0% | |
| CTAACATTGGGATGTATGTA+TGG | + | tig0020342:114817-114836 | Msa1380410:three_prime_UTR | 35.0% | |
| !! | CAGGAGTTTGTGTTACTTTA+TGG | + | tig0020342:114871-114890 | Msa1380410:three_prime_UTR | 35.0% |
| TTATGGTGAAGTTACTAGGA+TGG | + | tig0020342:114888-114907 | Msa1380410:three_prime_UTR | 35.0% | |
| !! | TTACTAGGATGGTTAGTTTG+TGG | + | tig0020342:114899-114918 | Msa1380410:three_prime_UTR | 35.0% |
| TGTTGGAGGTTAACTATTGT+TGG | - | tig0020342:114963-114982 | None:intergenic | 35.0% | |
| ACAATAGTTAACCTCCAACA+TGG | + | tig0020342:114963-114982 | Msa1380410:three_prime_UTR | 35.0% | |
| ATGCAAAACATTGTTGAGAG+AGG | + | tig0020342:115164-115183 | Msa1380410:three_prime_UTR | 35.0% | |
| TATGGTTGATCTCGTTGAAA+AGG | - | tig0020342:115217-115236 | None:intergenic | 35.0% | |
| !!! | GCGATTTTGGAACAAACAGA+AGG | - | tig0020342:106395-106414 | None:intergenic | 40.0% |
| ! | ATTTTGCAGCAACCCAACTA+CGG | - | tig0020342:106431-106450 | None:intergenic | 40.0% |
| !! | AAGGTTAAAGCTCTAAGTGG+AGG | - | tig0020342:106488-106507 | None:intergenic | 40.0% |
| ! | TCCACTTAGAGCTTTAACCT+TGG | + | tig0020342:106487-106506 | Msa1380410:CDS | 40.0% |
| !! | TCCAAGGTTAAAGCTCTAAG+TGG | - | tig0020342:106491-106510 | None:intergenic | 40.0% |
| !! | GACACACTTGGTCTTATCAA+AGG | + | tig0020342:106509-106528 | Msa1380410:CDS | 40.0% |
| ATCGAATCCCGTGAAAAACA+AGG | + | tig0020342:106601-106620 | Msa1380410:CDS | 40.0% | |
| GAGAAAGAAGAAAACGTACC+GGG | - | tig0020342:106711-106730 | None:intergenic | 40.0% | |
| CTTATAAGAGTGGGATAACG+GGG | + | tig0020342:106853-106872 | Msa1380410:intron | 40.0% | |
| GGTATTGCAGTTATTAGCTG+TGG | + | tig0020342:107038-107057 | Msa1380410:intron | 40.0% | |
| TGTGGCAAGAAAAAATGGAC+AGG | + | tig0020342:107056-107075 | Msa1380410:CDS | 40.0% | |
| AAATGGACAGGTAAGCTACT+TGG | + | tig0020342:107068-107087 | Msa1380410:intron | 40.0% | |
| !! | CTACTTGGCGGTTTTATACT+TGG | + | tig0020342:107083-107102 | Msa1380410:intron | 40.0% |
| GTGAGACTACTTGGGTTATA+TGG | + | tig0020342:107467-107486 | Msa1380410:intron | 40.0% | |
| TAAGTACTTTGCGTAGGCAA+AGG | + | tig0020342:107720-107739 | Msa1380410:intron | 40.0% | |
| AGGATTTGAGAGGAGAGAAT+TGG | + | tig0020342:107740-107759 | Msa1380410:intron | 40.0% | |
| GGATTTGAGAGGAGAGAATT+GGG | + | tig0020342:107741-107760 | Msa1380410:intron | 40.0% | |
| !!! | GAGAGTTTTGTTGTCCATTG+TGG | + | tig0020342:107986-108005 | Msa1380410:intron | 40.0% |
| TGGATTGTGTTTGCATTTGG+CGG | - | tig0020342:108106-108125 | None:intergenic | 40.0% | |
| !! | ATTCACGGGTAGCTTTAACT+GGG | - | tig0020342:108249-108268 | None:intergenic | 40.0% |
| GAAAGTTTCCAACCATTCAC+GGG | - | tig0020342:108263-108282 | None:intergenic | 40.0% | |
| !!! | AGCTTTTGAAGCCTCTTTAC+AGG | + | tig0020342:108561-108580 | Msa1380410:intron | 40.0% |
| !! | GATTAGAGGTACCTGTAAAG+AGG | - | tig0020342:108575-108594 | None:intergenic | 40.0% |
| CTTTACAGGTACCTCTAATC+GGG | + | tig0020342:108575-108594 | Msa1380410:intron | 40.0% | |
| GAAAATCGTAACCCGATTAG+AGG | - | tig0020342:108589-108608 | None:intergenic | 40.0% | |
| TAATGAGGAATCGTGGAGAT+GGG | - | tig0020342:108617-108636 | None:intergenic | 40.0% | |
| TTAATGAGGAATCGTGGAGA+TGG | - | tig0020342:108618-108637 | None:intergenic | 40.0% | |
| ATCTCCACGATTCCTCATTA+AGG | + | tig0020342:108617-108636 | Msa1380410:intron | 40.0% | |
| TCTCCACGATTCCTCATTAA+GGG | + | tig0020342:108618-108637 | Msa1380410:intron | 40.0% | |
| AGACACAAACACCCTTAATG+AGG | - | tig0020342:108632-108651 | None:intergenic | 40.0% | |
| ! | GTGCTTTTGGATACATGAGA+TGG | + | tig0020342:108699-108718 | Msa1380410:intron | 40.0% |
| ACATTTCCTACGTGCAATTG+CGG | + | tig0020342:108796-108815 | Msa1380410:intron | 40.0% | |
| GCCAATAGAGTCTTGAAACA+CGG | + | tig0020342:108845-108864 | Msa1380410:intron | 40.0% | |
| AGTCTTGAAACACGGCATAA+TGG | + | tig0020342:108853-108872 | Msa1380410:intron | 40.0% | |
| GTCTTGAAACACGGCATAAT+GGG | + | tig0020342:108854-108873 | Msa1380410:intron | 40.0% | |
| TACATTGCCCTATTTCAAGC+AGG | - | tig0020342:108890-108909 | None:intergenic | 40.0% | |
| TCATATTCAGTCCCTCGTAA+TGG | + | tig0020342:108985-109004 | Msa1380410:intron | 40.0% | |
| TGGAGAATTAACAGTGGTGT+AGG | - | tig0020342:109110-109129 | None:intergenic | 40.0% | |
| AAAATGGTGCATATGACAGG+GGG | - | tig0020342:109137-109156 | None:intergenic | 40.0% | |
| TTACTTACATGTACGGGCAA+AGG | + | tig0020342:109457-109476 | Msa1380410:CDS | 40.0% | |
| TACTTACATGTACGGGCAAA+GGG | + | tig0020342:109458-109477 | Msa1380410:CDS | 40.0% | |
| !! | GGTTTTTGAAGAATCGATGC+TGG | - | tig0020342:109533-109552 | None:intergenic | 40.0% |
| !! | GCATCGATTCTTCAAAAACC+TGG | + | tig0020342:109533-109552 | Msa1380410:CDS | 40.0% |
| ! | AGGGTTCTGATTTGATGATC+AGG | + | tig0020342:109759-109778 | Msa1380410:intron | 40.0% |
| ! | ATTTTCTACGACAGAAGCAG+GGG | + | tig0020342:109842-109861 | Msa1380410:intron | 40.0% |
| ! | TCTGTCACAAAGGGTATACT+TGG | - | tig0020342:109998-110017 | None:intergenic | 40.0% |
| ! | TTGATAACTGCACGAAGATC+TGG | + | tig0020342:110349-110368 | Msa1380410:CDS | 40.0% |
| !!! | CTATTTTTAGGAGGCTGCAT+AGG | - | tig0020342:110514-110533 | None:intergenic | 40.0% |
| !! | GACCATCGAAAATTTGTTGC+TGG | + | tig0020342:110589-110608 | Msa1380410:CDS | 40.0% |
| ! | TGCCAGCAACAAATTTTCGA+TGG | - | tig0020342:110594-110613 | None:intergenic | 40.0% |
| TGTACTAGAGACGTTTGAGA+AGG | + | tig0020342:110751-110770 | Msa1380410:intron | 40.0% | |
| AGATATAGCATGCAGCATTC+AGG | - | tig0020342:111428-111447 | None:intergenic | 40.0% | |
| CAAAGGACCAGCGTTAAAAA+TGG | - | tig0020342:111598-111617 | None:intergenic | 40.0% | |
| ATAAAGGCGAACCTGTTCAA+AGG | - | tig0020342:111615-111634 | None:intergenic | 40.0% | |
| TGAGACACCAATTAAAGCAC+TGG | + | tig0020342:111679-111698 | Msa1380410:CDS | 40.0% | |
| TGTGTTGCCATCTATATCCT+CGG | - | tig0020342:111705-111724 | None:intergenic | 40.0% | |
| GATGGCAACACAATCTATCT+AGG | + | tig0020342:111713-111732 | Msa1380410:CDS | 40.0% | |
| GCTTCTGTTGATATACGTAC+AGG | + | tig0020342:111755-111774 | Msa1380410:CDS | 40.0% | |
| ! | TGTTTTACGGGAAAATGCTC+TGG | + | tig0020342:112318-112337 | Msa1380410:CDS | 40.0% |
| AATCATGCTCAAGGTCGATA+TGG | - | tig0020342:112555-112574 | None:intergenic | 40.0% | |
| AGTACAGAGCATGTAGTTAC+TGG | + | tig0020342:112595-112614 | Msa1380410:intron | 40.0% | |
| !! | ATGAGTAATAGTGGTGGACA+TGG | - | tig0020342:112706-112725 | None:intergenic | 40.0% |
| !!! | GCTATTTTTCTAGGACTGGA+TGG | + | tig0020342:112732-112751 | Msa1380410:intron | 40.0% |
| TGGATGGCTATTTACGACTT+TGG | + | tig0020342:112748-112767 | Msa1380410:CDS | 40.0% | |
| GGATGGCTATTTACGACTTT+GGG | + | tig0020342:112749-112768 | Msa1380410:CDS | 40.0% | |
| !! | GACTTTGGGATACAAAGACA+AGG | + | tig0020342:112763-112782 | Msa1380410:CDS | 40.0% |
| AGTTGTAGTTAACTACCGCT+GGG | - | tig0020342:113160-113179 | None:intergenic | 40.0% | |
| TCCATTTGTAAACATGAGCC+TGG | + | tig0020342:113280-113299 | Msa1380410:intron | 40.0% | |
| CCATTTGTAAACATGAGCCT+GGG | + | tig0020342:113281-113300 | Msa1380410:intron | 40.0% | |
| TCATCACATAATTGGGGTCA+GGG | - | tig0020342:113560-113579 | None:intergenic | 40.0% | |
| ATCATCACATAATTGGGGTC+AGG | - | tig0020342:113561-113580 | None:intergenic | 40.0% | |
| ! | CAGCAAAAATAGGCCAGTTT+TGG | - | tig0020342:113823-113842 | None:intergenic | 40.0% |
| !!! | CAAAACTGGCCTATTTTTGC+TGG | + | tig0020342:113821-113840 | Msa1380410:intron | 40.0% |
| !! | CAAAACTGGCCTATTTTGCA+GGG | + | tig0020342:113882-113901 | Msa1380410:intron | 40.0% |
| GTGAGGTTATTTGTGATGTC+AGG | + | tig0020342:114092-114111 | Msa1380410:intron | 40.0% | |
| TGCAATAGATCCATTGGGAA+TGG | + | tig0020342:114221-114240 | Msa1380410:intron | 40.0% | |
| GCAATAGATCCATTGGGAAT+GGG | + | tig0020342:114222-114241 | Msa1380410:intron | 40.0% | |
| GGAAATCTGAAGAGAAAACG+GGG | - | tig0020342:114271-114290 | None:intergenic | 40.0% | |
| GGGAAATCTGAAGAGAAAAC+GGG | - | tig0020342:114272-114291 | None:intergenic | 40.0% | |
| ACTATGAAAGAGATCACGGA+TGG | + | tig0020342:114518-114537 | Msa1380410:CDS | 40.0% | |
| CTATGAAAGAGATCACGGAT+GGG | + | tig0020342:114519-114538 | Msa1380410:CDS | 40.0% | |
| TATGAAAGAGATCACGGATG+GGG | + | tig0020342:114520-114539 | Msa1380410:CDS | 40.0% | |
| CTAAATCACAACCCTTCATC+TGG | - | tig0020342:114755-114774 | None:intergenic | 40.0% | |
| ATGAAGGGTTGTGATTTAGC+TGG | + | tig0020342:114756-114775 | Msa1380410:exon | 40.0% | |
| TGGGATGTATGTATGGTGAT+TGG | + | tig0020342:114824-114843 | Msa1380410:three_prime_UTR | 40.0% | |
| !! | TGTATGGTGATTGGTGATGA+AGG | + | tig0020342:114833-114852 | Msa1380410:three_prime_UTR | 40.0% |
| ATAGTTAACCTCCAACATGG+AGG | + | tig0020342:114966-114985 | Msa1380410:three_prime_UTR | 40.0% | |
| GCTTTAACCTTGGACACACT+TGG | + | tig0020342:106497-106516 | Msa1380410:CDS | 45.0% | |
| GATAAGACCAAGTGTGTCCA+AGG | - | tig0020342:106507-106526 | None:intergenic | 45.0% | |
| GAATCCCGTGAAAAACAAGG+AGG | + | tig0020342:106604-106623 | Msa1380410:CDS | 45.0% | |
| !!! | TGGGACCTCCTTGTTTTTCA+CGG | - | tig0020342:106612-106631 | None:intergenic | 45.0% |
| TGAAAAACAAGGAGGTCCCA+AGG | + | tig0020342:106612-106631 | Msa1380410:CDS | 45.0% | |
| TCCCAAGGTAGTAGATAGGT+GGG | + | tig0020342:106627-106646 | Msa1380410:CDS | 45.0% | |
| CATTGATCGCAAATCCAACC+CGG | + | tig0020342:106690-106709 | Msa1380410:CDS | 45.0% | |
| AAGAAGAAAACGTACCGGGT+TGG | - | tig0020342:106707-106726 | None:intergenic | 45.0% | |
| !! | CAGTGCATGTCCTTTAAAGC+TGG | + | tig0020342:106916-106935 | Msa1380410:intron | 45.0% |
| CTAGAGAAACTCCAGTGACA+GGG | - | tig0020342:107202-107221 | None:intergenic | 45.0% | |
| TTGAGAGGAGAGAATTGGGT+AGG | + | tig0020342:107745-107764 | Msa1380410:intron | 45.0% | |
| ATTGTGTTTGCATTTGGCGG+AGG | - | tig0020342:108103-108122 | None:intergenic | 45.0% | |
| !! | CATTCACGGGTAGCTTTAAC+TGG | - | tig0020342:108250-108269 | None:intergenic | 45.0% |
| CAGTTAAAGCTACCCGTGAA+TGG | + | tig0020342:108248-108267 | Msa1380410:intron | 45.0% | |
| TAAAGCTACCCGTGAATGGT+TGG | + | tig0020342:108252-108271 | Msa1380410:intron | 45.0% | |
| ACACCCTTAATGAGGAATCG+TGG | - | tig0020342:108624-108643 | None:intergenic | 45.0% | |
| !! | GATGGATTGTGTTTGCGACA+TGG | + | tig0020342:108717-108736 | Msa1380410:intron | 45.0% |
| GCCGTGTTTCAAGACTCTAT+TGG | - | tig0020342:108849-108868 | None:intergenic | 45.0% | |
| GGCACATGGAGAATTAACAG+TGG | - | tig0020342:109116-109135 | None:intergenic | 45.0% | |
| GCAAAGGGAATGCAAGCATA+AGG | + | tig0020342:109473-109492 | Msa1380410:CDS | 45.0% | |
| CGCTGAATCAGGAACTTCAA+GGG | - | tig0020342:109500-109519 | None:intergenic | 45.0% | |
| TCGCTGAATCAGGAACTTCA+AGG | - | tig0020342:109501-109520 | None:intergenic | 45.0% | |
| ! | TGGTAACGTCTTGTGTTGCA+AGG | + | tig0020342:109570-109589 | Msa1380410:CDS | 45.0% |
| TAACGTCTTGTGTTGCAAGG+TGG | + | tig0020342:109573-109592 | Msa1380410:CDS | 45.0% | |
| GCTATACGGCTAAAGCTCAA+TGG | - | tig0020342:109890-109909 | None:intergenic | 45.0% | |
| TCTGCAGTACTATAGGAGTC+TGG | - | tig0020342:109929-109948 | None:intergenic | 45.0% | |
| GAAACAGATGTGAACCAGGT+AGG | - | tig0020342:110553-110572 | None:intergenic | 45.0% | |
| TTAACGCTGGTCCTTTGAAC+AGG | + | tig0020342:111601-111620 | Msa1380410:intron | 45.0% | |
| ATCTATCTAGGGAATGGGTC+TGG | + | tig0020342:111725-111744 | Msa1380410:CDS | 45.0% | |
| ATTATCTGGCGAGGGTAGTT+TGG | + | tig0020342:111989-112008 | Msa1380410:intron | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | tig0020342:112055-112074 | Msa1380410:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | tig0020342:112056-112075 | Msa1380410:intron | 45.0% |
| ! | GAAGCATCAGATCCATTGTC+AGG | + | tig0020342:112340-112359 | Msa1380410:CDS | 45.0% |
| AGGCAGCTTCTTTCATCTGT+AGG | + | tig0020342:112783-112802 | Msa1380410:CDS | 45.0% | |
| CAGTTGTAGTTAACTACCGC+TGG | - | tig0020342:113161-113180 | None:intergenic | 45.0% | |
| CAGCGGTAGTTAACTACAAC+TGG | + | tig0020342:113159-113178 | Msa1380410:intron | 45.0% | |
| AGCGGTAGTTAACTACTGCT+GGG | + | tig0020342:113199-113218 | Msa1380410:intron | 45.0% | |
| CCCAGGCTCATGTTTACAAA+TGG | - | tig0020342:113284-113303 | None:intergenic | 45.0% | |
| ATCATCACATAACTGGGGTC+AGG | + | tig0020342:113729-113748 | Msa1380410:intron | 45.0% | |
| TCATCACATAACTGGGGTCA+GGG | + | tig0020342:113730-113749 | Msa1380410:intron | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | + | tig0020342:113807-113826 | Msa1380410:intron | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | + | tig0020342:113807-113826 | Msa1380410:intron | 45.0% | |
| ! | CCTGCAAAATAGGCCAGTTT+TGG | - | tig0020342:113884-113903 | None:intergenic | 45.0% |
| !! | CCAAAACTGGCCTATTTTGC+AGG | + | tig0020342:113881-113900 | Msa1380410:intron | 45.0% |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | - | tig0020342:113894-113913 | None:intergenic | 45.0% |
| CATGCAGAATAGGCTGCTTA+AGG | - | tig0020342:113992-114011 | None:intergenic | 45.0% | |
| CAAGAGTTTCCCATTCCCAA+TGG | - | tig0020342:114234-114253 | None:intergenic | 45.0% | |
| CATTGGGAATGGGAAACTCT+TGG | + | tig0020342:114232-114251 | Msa1380410:intron | 45.0% | |
| ACAGCTAGGCCATGCATTTA+AGG | - | tig0020342:114359-114378 | None:intergenic | 45.0% | |
| TGTGTGTTCTTCACTCTCCT+TGG | - | tig0020342:114633-114652 | None:intergenic | 45.0% | |
| !! | ATGGTGATTGGTGATGAAGG+TGG | + | tig0020342:114836-114855 | Msa1380410:three_prime_UTR | 45.0% |
| AAGGTGGTAAAAGTTCGAGC+AGG | + | tig0020342:114852-114871 | Msa1380410:three_prime_UTR | 45.0% | |
| AAATCCTACCTCCTCCATGT+TGG | - | tig0020342:114980-114999 | None:intergenic | 45.0% | |
| AACATGGAGGAGGTAGGATT+TGG | + | tig0020342:114979-114998 | Msa1380410:three_prime_UTR | 45.0% | |
| ACATGGAGGAGGTAGGATTT+GGG | + | tig0020342:114980-114999 | Msa1380410:three_prime_UTR | 45.0% | |
| !! | AAATAAATAAGATTATAATT+TGG | - | tig0020342:112531-112550 | None:intergenic | 5.0% |
| !!! | AATTTTTTTTTTATAGTTTT+TGG | + | tig0020342:113440-113459 | Msa1380410:intron | 5.0% |
| !!! | AATTTTTTTTTTATAGTTTT+TGG | + | tig0020342:113440-113459 | Msa1380410:intron | 5.0% |
| !! | AAAATTATCAATTAATTAAA+AGG | + | tig0020342:114132-114151 | Msa1380410:intron | 5.0% |
| !! | AAATTATCAATTAATTAAAA+GGG | + | tig0020342:114133-114152 | Msa1380410:intron | 5.0% |
| ! | AGAAGGAGTGTGCTTTGTGC+TGG | - | tig0020342:106378-106397 | None:intergenic | 50.0% |
| !! | TGGTGGTGAAGCTGCGATTT+TGG | - | tig0020342:106408-106427 | None:intergenic | 50.0% |
| CTCTAAGTGGAGGACAACCA+GGG | - | tig0020342:106478-106497 | None:intergenic | 50.0% | |
| !!! | GGGACCTCCTTGTTTTTCAC+GGG | - | tig0020342:106611-106630 | None:intergenic | 50.0% |
| GAGGTCCCAAGGTAGTAGAT+AGG | + | tig0020342:106623-106642 | Msa1380410:CDS | 50.0% | |
| GTCCCAAGGTAGTAGATAGG+TGG | + | tig0020342:106626-106645 | Msa1380410:CDS | 50.0% | |
| CCCCACCTATCTACTACCTT+GGG | - | tig0020342:106631-106650 | None:intergenic | 50.0% | |
| CCCAAGGTAGTAGATAGGTG+GGG | + | tig0020342:106628-106647 | Msa1380410:CDS | 50.0% | |
| ACCCCACCTATCTACTACCT+TGG | - | tig0020342:106632-106651 | None:intergenic | 50.0% | |
| TGGACAGGTAAGCTACTTGG+CGG | + | tig0020342:107071-107090 | Msa1380410:intron | 50.0% | |
| !! | GGCGGTTTTATACTTGGCTC+TGG | + | tig0020342:107089-107108 | Msa1380410:intron | 50.0% |
| GCTAGAGAAACTCCAGTGAC+AGG | - | tig0020342:107203-107222 | None:intergenic | 50.0% | |
| GCGTAGGCAAAGGATTTGAG+AGG | + | tig0020342:107730-107749 | Msa1380410:intron | 50.0% | |
| GAGGAGAGAATTGGGTAGGA+AGG | + | tig0020342:107749-107768 | Msa1380410:intron | 50.0% | |
| GGATTGTGTTTGCGACATGG+TGG | + | tig0020342:108720-108739 | Msa1380410:intron | 50.0% | |
| TTGTGTTTGCGACATGGTGG+AGG | + | tig0020342:108723-108742 | Msa1380410:intron | 50.0% | |
| TAAGCTCCGCAATTGCACGT+AGG | - | tig0020342:108805-108824 | None:intergenic | 50.0% | |
| AGGGATCAGGTCCATTACGA+GGG | - | tig0020342:108999-109018 | None:intergenic | 50.0% | |
| TAGGGATCAGGTCCATTACG+AGG | - | tig0020342:109000-109019 | None:intergenic | 50.0% | |
| GAAGTTCCTGATTCAGCGAC+AGG | + | tig0020342:109502-109521 | Msa1380410:CDS | 50.0% | |
| GAAGATCCTGTCGCTGAATC+AGG | - | tig0020342:109511-109530 | None:intergenic | 50.0% | |
| GGGTTCATGGCTCACAGATT+TGG | - | tig0020342:110379-110398 | None:intergenic | 50.0% | |
| TGCTGGCACCAATAACCATC+AGG | + | tig0020342:110606-110625 | Msa1380410:CDS | 50.0% | |
| CTGCAAGTCCAGATTGAGAG+TGG | - | tig0020342:110885-110904 | None:intergenic | 50.0% | |
| !! | ACCAATTAAAGCACTGGCCG+AGG | + | tig0020342:111685-111704 | Msa1380410:CDS | 50.0% |
| TCCTCGGCCAGTGCTTTAAT+TGG | - | tig0020342:111689-111708 | None:intergenic | 50.0% | |
| CAGGTACCCCCCAAAAGTTA+TGG | + | tig0020342:111774-111793 | Msa1380410:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | tig0020342:112057-112076 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | tig0020342:112054-112073 | Msa1380410:intron | 50.0% |
| AAATATGCCAGATGCCGACC+CGG | - | tig0020342:112082-112101 | None:intergenic | 50.0% | |
| AAGCTACCACAGGTAGCTCA+GGG | - | tig0020342:112368-112387 | None:intergenic | 50.0% | |
| CTACCTGTGGTAGCTTCATG+TGG | + | tig0020342:112372-112391 | Msa1380410:CDS | 50.0% | |
| TCACCACATGAAGCTACCAC+AGG | - | tig0020342:112378-112397 | None:intergenic | 50.0% | |
| !! | GTGGTGGACATGGCAAAACT+CGG | - | tig0020342:112696-112715 | None:intergenic | 50.0% |
| CAGCAGTAGTTAACTACCGC+TGG | - | tig0020342:113200-113219 | None:intergenic | 50.0% | |
| CAGCGGTAGTTAACTACTGC+TGG | + | tig0020342:113198-113217 | Msa1380410:intron | 50.0% | |
| GCGGTAGTTAACTACTGCTG+GGG | + | tig0020342:113200-113219 | Msa1380410:intron | 50.0% | |
| CGGTAGTTAACTACTGCTGG+GGG | + | tig0020342:113201-113220 | Msa1380410:intron | 50.0% | |
| ATGACAGTCATTGGAGACCC+AGG | - | tig0020342:113301-113320 | None:intergenic | 50.0% | |
| CATCACATAACTGGGGTCAG+GGG | + | tig0020342:113731-113750 | Msa1380410:intron | 50.0% | |
| AGGGGCTGCAATAGATCCAT+TGG | + | tig0020342:114215-114234 | Msa1380410:intron | 50.0% | |
| GGGGCTGCAATAGATCCATT+GGG | + | tig0020342:114216-114235 | Msa1380410:intron | 50.0% | |
| TGGGAATGGGAAACTCTTGG+TGG | + | tig0020342:114235-114254 | Msa1380410:intron | 50.0% | |
| CTCAGATACACCCAAAGGAG+CGG | + | tig0020342:114472-114491 | Msa1380410:intron | 50.0% | |
| AAGACGGCGTCAAGAGACAA+AGG | + | tig0020342:114680-114699 | Msa1380410:CDS | 50.0% | |
| GTTAACCTCCAACATGGAGG+AGG | + | tig0020342:114969-114988 | Msa1380410:three_prime_UTR | 50.0% | |
| GGTAGGATTTGGGCATCTGT+TGG | + | tig0020342:114990-115009 | Msa1380410:three_prime_UTR | 50.0% | |
| !! | TTTGGGCATCTGTTGGCTTG+TGG | + | tig0020342:114997-115016 | Msa1380410:three_prime_UTR | 50.0% |
| AGCTTCACCACCACCGTAGT+TGG | + | tig0020342:106415-106434 | Msa1380410:five_prime_UTR | 55.0% | |
| GCTTCACCACCACCGTAGTT+GGG | + | tig0020342:106416-106435 | Msa1380410:five_prime_UTR | 55.0% | |
| TTGCAGCAACCCAACTACGG+TGG | - | tig0020342:106428-106447 | None:intergenic | 55.0% | |
| CACTCTACAGTGGTAGCTCG+AGG | - | tig0020342:106455-106474 | None:intergenic | 55.0% | |
| ! | ACAACCAGGGCACTCTACAG+TGG | - | tig0020342:106465-106484 | None:intergenic | 55.0% |
| ! | GCTCTAAGTGGAGGACAACC+AGG | - | tig0020342:106479-106498 | None:intergenic | 55.0% |
| ! | TTCTGAGGGACGTGCACTGT+CGG | + | tig0020342:106756-106775 | Msa1380410:intron | 55.0% |
| GGGGCGAAACAGTTGAACGT+CGG | + | tig0020342:106872-106891 | Msa1380410:intron | 55.0% | |
| !!! | GAGGTTTTGAGCCCTGTCAC+TGG | + | tig0020342:107188-107207 | Msa1380410:CDS | 55.0% |
| TGGCGGAGGAACCATGATGA+AGG | - | tig0020342:108089-108108 | None:intergenic | 55.0% | |
| ! | TGCATATGACAGGGGGCACA+TGG | - | tig0020342:109130-109149 | None:intergenic | 55.0% |
| ! | GCACTGGCCGAGGATATAGA+TGG | + | tig0020342:111695-111714 | Msa1380410:CDS | 55.0% |
| AGGGAATGGGTCTGGTGACA+TGG | + | tig0020342:111733-111752 | Msa1380410:CDS | 55.0% | |
| TGGCGAGGGTAGTTTGGATC+TGG | + | tig0020342:111995-112014 | Msa1380410:intron | 55.0% | |
| CTTATCCCACTAAGTGGGGC+CGG | + | tig0020342:112060-112079 | Msa1380410:intron | 55.0% | |
| TTATCCCACTAAGTGGGGCC+GGG | + | tig0020342:112061-112080 | Msa1380410:intron | 55.0% | |
| ! | TAGCTCAGGGTGCCTGACAA+TGG | - | tig0020342:112355-112374 | None:intergenic | 55.0% |
| GAAGCTACCACAGGTAGCTC+AGG | - | tig0020342:112369-112388 | None:intergenic | 55.0% | |
| GGTAGCGAATCCGCTCCTTT+GGG | - | tig0020342:114485-114504 | None:intergenic | 55.0% | |
| ! | TGGTAGCGAATCCGCTCCTT+TGG | - | tig0020342:114486-114505 | None:intergenic | 55.0% |
| ! | AGCGGATTCGCTACCAAGCA+AGG | + | tig0020342:114490-114509 | Msa1380410:CDS | 55.0% |
| ACCTCCAACATGGAGGAGGT+AGG | + | tig0020342:114973-114992 | Msa1380410:three_prime_UTR | 55.0% | |
| TCCTACCTCCTCCATGTTGG+AGG | - | tig0020342:114977-114996 | None:intergenic | 55.0% | |
| CAGCAACCCAACTACGGTGG+TGG | - | tig0020342:106425-106444 | None:intergenic | 60.0% | |
| ! | GCTACCACTGTAGAGTGCCC+TGG | + | tig0020342:106458-106477 | Msa1380410:CDS | 60.0% |
| CGGCCCCACTTAGTGGGATA+AGG | - | tig0020342:112062-112081 | None:intergenic | 60.0% | |
| CAGGCACCCTGAGCTACCTG+TGG | + | tig0020342:112359-112378 | Msa1380410:CDS | 65.0% | |
| CCGACCCGGCCCCACTTAGT+GGG | - | tig0020342:112068-112087 | None:intergenic | 70.0% | |
| CCCACTAAGTGGGGCCGGGT+CGG | + | tig0020342:112065-112084 | Msa1380410:intron | 70.0% | |
| GCCGACCCGGCCCCACTTAG+TGG | - | tig0020342:112069-112088 | None:intergenic | 75.0% | |
| AGTGGGGCCGGGTCGGCATC+TGG | + | tig0020342:112072-112091 | Msa1380410:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020342 | gene | 106365 | 115259 | 106365 | ID=Msa1380410;Name=Msa1380410 |
| tig0020342 | mRNA | 106365 | 115259 | 106365 | ID=Msa1380410-mRNA-1;Parent=Msa1380410;Name=Msa1380410-mRNA-1;_AED=0.09;_eAED=0.09;_QI=84|0.90|0.91|1|1|1|12|490|478 |
| tig0020342 | exon | 106365 | 106530 | 106365 | ID=Msa1380410-mRNA-1:exon:7068;Parent=Msa1380410-mRNA-1 |
| tig0020342 | exon | 106599 | 106711 | 106599 | ID=Msa1380410-mRNA-1:exon:7069;Parent=Msa1380410-mRNA-1 |
| tig0020342 | exon | 107048 | 107077 | 107048 | ID=Msa1380410-mRNA-1:exon:7070;Parent=Msa1380410-mRNA-1 |
| tig0020342 | exon | 107185 | 107321 | 107185 | ID=Msa1380410-mRNA-1:exon:7071;Parent=Msa1380410-mRNA-1 |
| tig0020342 | exon | 109447 | 109626 | 109447 | ID=Msa1380410-mRNA-1:exon:7072;Parent=Msa1380410-mRNA-1 |
| tig0020342 | exon | 110320 | 110383 | 110320 | ID=Msa1380410-mRNA-1:exon:7073;Parent=Msa1380410-mRNA-1 |
| tig0020342 | exon | 110520 | 110627 | 110520 | ID=Msa1380410-mRNA-1:exon:7074;Parent=Msa1380410-mRNA-1 |
| tig0020342 | exon | 111623 | 111776 | 111623 | ID=Msa1380410-mRNA-1:exon:7075;Parent=Msa1380410-mRNA-1 |
| tig0020342 | exon | 112304 | 112393 | 112304 | ID=Msa1380410-mRNA-1:exon:7076;Parent=Msa1380410-mRNA-1 |
| tig0020342 | exon | 112745 | 112872 | 112745 | ID=Msa1380410-mRNA-1:exon:7077;Parent=Msa1380410-mRNA-1 |
| tig0020342 | exon | 113984 | 114041 | 113984 | ID=Msa1380410-mRNA-1:exon:7078;Parent=Msa1380410-mRNA-1 |
| tig0020342 | exon | 114477 | 115259 | 114477 | ID=Msa1380410-mRNA-1:exon:7079;Parent=Msa1380410-mRNA-1 |
| tig0020342 | five_prime_UTR | 106365 | 106448 | 106365 | ID=Msa1380410-mRNA-1:five_prime_utr;Parent=Msa1380410-mRNA-1 |
| tig0020342 | CDS | 106449 | 106530 | 106449 | ID=Msa1380410-mRNA-1:cds;Parent=Msa1380410-mRNA-1 |
| tig0020342 | CDS | 106599 | 106711 | 106599 | ID=Msa1380410-mRNA-1:cds;Parent=Msa1380410-mRNA-1 |
| tig0020342 | CDS | 107048 | 107077 | 107048 | ID=Msa1380410-mRNA-1:cds;Parent=Msa1380410-mRNA-1 |
| tig0020342 | CDS | 107185 | 107321 | 107185 | ID=Msa1380410-mRNA-1:cds;Parent=Msa1380410-mRNA-1 |
| tig0020342 | CDS | 109447 | 109626 | 109447 | ID=Msa1380410-mRNA-1:cds;Parent=Msa1380410-mRNA-1 |
| tig0020342 | CDS | 110320 | 110383 | 110320 | ID=Msa1380410-mRNA-1:cds;Parent=Msa1380410-mRNA-1 |
| tig0020342 | CDS | 110520 | 110627 | 110520 | ID=Msa1380410-mRNA-1:cds;Parent=Msa1380410-mRNA-1 |
| tig0020342 | CDS | 111623 | 111776 | 111623 | ID=Msa1380410-mRNA-1:cds;Parent=Msa1380410-mRNA-1 |
| tig0020342 | CDS | 112304 | 112393 | 112304 | ID=Msa1380410-mRNA-1:cds;Parent=Msa1380410-mRNA-1 |
| tig0020342 | CDS | 112745 | 112872 | 112745 | ID=Msa1380410-mRNA-1:cds;Parent=Msa1380410-mRNA-1 |
| tig0020342 | CDS | 113984 | 114041 | 113984 | ID=Msa1380410-mRNA-1:cds;Parent=Msa1380410-mRNA-1 |
| tig0020342 | CDS | 114477 | 114769 | 114477 | ID=Msa1380410-mRNA-1:cds;Parent=Msa1380410-mRNA-1 |
| tig0020342 | three_prime_UTR | 114770 | 115259 | 114770 | ID=Msa1380410-mRNA-1:three_prime_utr;Parent=Msa1380410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
