Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123800 | XP_003625511.1 | 85.520 | 221 | 24 | 4 | 1 | 214 | 1 | 220 | 9.24e-117 | 344 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123800 | G7L0L4 | 85.520 | 221 | 24 | 4 | 1 | 214 | 1 | 220 | 4.41e-117 | 344 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1123800 | Msa1169940 | 0.912311 | 2.251792e-83 | -8.615850e-47 |
| Msa1123800 | Msa1356150 | 0.923052 | 4.411428e-89 | -8.615850e-47 |
| Msa1123800 | Msa1385750 | 0.913792 | 4.076879e-84 | -8.615850e-47 |
| Msa1123800 | Msa1409220 | 0.909142 | 7.892115e-82 | -8.615850e-47 |
| Msa1123800 | Msa1434120 | 0.913595 | 5.130789e-84 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123800 | MtrunA17_Chr7g0263051 | 85.520 | 221 | 24 | 4 | 1 | 214 | 1 | 220 | 8.50e-121 | 344 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123800 | AT3G53630.2 | 42.623 | 244 | 113 | 8 | 12 | 249 | 3 | 225 | 1.64e-48 | 161 |
| Msa1123800 | AT3G53630.1 | 46.305 | 203 | 92 | 6 | 12 | 210 | 3 | 192 | 2.19e-47 | 157 |
Find 96 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGATGCAATCTTAATTT+TGG | 0.074580 | 7_3:-74785679 | None:intergenic |
| GATTGACCATAACCTCAATT+TGG | 0.202384 | 7_3:+74784994 | Msa1123800:CDS |
| TGGGATTTGCACTGTGAAAA+TGG | 0.222632 | 7_3:-74785659 | None:intergenic |
| ACTCCAACTGGTTGTGAATA+AGG | 0.268058 | 7_3:-74783084 | None:intergenic |
| GAATCTTCGTTGTTGATGTT+TGG | 0.305644 | 7_3:-74782607 | None:intergenic |
| AACAATGGACCAGTATAAAA+AGG | 0.309171 | 7_3:-74785825 | None:intergenic |
| CATTGAAATTTCAAGTTTGA+TGG | 0.324699 | 7_3:+74785576 | Msa1123800:CDS |
| AATCTTCGTTGTTGATGTTT+GGG | 0.328350 | 7_3:-74782606 | None:intergenic |
| GTAACTGCTTCACCGGAATT+CGG | 0.343202 | 7_3:-74782898 | None:intergenic |
| CTGTCGTCATTGACGTTGTC+TGG | 0.355101 | 7_3:-74782700 | None:intergenic |
| TAGAACCCAAATTGAGGTTA+TGG | 0.365006 | 7_3:-74785000 | None:intergenic |
| TGTGAATTGTGAAATGGAAA+TGG | 0.366177 | 7_3:-74782524 | None:intergenic |
| TGGCTGACGTTGAAGGCAAT+TGG | 0.369030 | 7_3:-74784959 | None:intergenic |
| CGGTGAAGCAGTTACGATTC+GGG | 0.372928 | 7_3:+74782906 | Msa1123800:CDS |
| ATTGACCATAACCTCAATTT+GGG | 0.373255 | 7_3:+74784995 | Msa1123800:CDS |
| ATTCTCGAGGTGGGTGGTTG+TGG | 0.374448 | 7_3:-74782635 | None:intergenic |
| GATACGCTGAAGCCGAATTC+CGG | 0.405492 | 7_3:+74782886 | Msa1123800:CDS |
| AATAACTCATTATCTTTGCT+TGG | 0.411400 | 7_3:+74785786 | Msa1123800:three_prime_UTR |
| CCGGTGAAGCAGTTACGATT+CGG | 0.415694 | 7_3:+74782905 | Msa1123800:CDS |
| TACTCGAAACCTTGATGAAA+AGG | 0.423065 | 7_3:+74782662 | Msa1123800:CDS |
| GTGAATTGTGAAATGGAAAT+GGG | 0.424607 | 7_3:-74782523 | None:intergenic |
| AATAATCTTTGCTTCTCAAA+GGG | 0.425067 | 7_3:-74785633 | None:intergenic |
| TCTTCATCTCCAACTCCAAC+TGG | 0.432362 | 7_3:-74783096 | None:intergenic |
| TTTCGCCTGAGTATATTTAT+GGG | 0.433268 | 7_3:+74783028 | Msa1123800:CDS |
| GGAATGGCATGGGCATATCA+TGG | 0.438655 | 7_3:+74782984 | Msa1123800:CDS |
| GGCTGACGTTGAAGGCAATT+GGG | 0.439791 | 7_3:-74784958 | None:intergenic |
| CTTTAAAATCATACTTGTAA+AGG | 0.444260 | 7_3:+74785714 | Msa1123800:three_prime_UTR |
| TTGCTTTCTGCCCGACCTCC+TGG | 0.447681 | 7_3:-74782801 | None:intergenic |
| GTGAAATGAAAGAGATATGC+AGG | 0.447964 | 7_3:-74782551 | None:intergenic |
| GCCCGACCTCCTGGTAAGTA+CGG | 0.449996 | 7_3:-74782792 | None:intergenic |
| AAGCTGATTGTCAGTGGAGA+AGG | 0.455681 | 7_3:+74782862 | Msa1123800:CDS |
| CATCATCATCGGAGCCGAAA+AGG | 0.460905 | 7_3:-74782753 | None:intergenic |
| CCCGTACTTACCAGGAGGTC+GGG | 0.461045 | 7_3:+74782791 | Msa1123800:CDS |
| GGGAGTATGTTGTGTGGGAA+TGG | 0.467402 | 7_3:+74782968 | Msa1123800:CDS |
| TGTTGTCAGCAAGGGTTTGA+AGG | 0.470639 | 7_3:+74783128 | Msa1123800:CDS |
| CGGGAGAGTAGTATTTGTGT+TGG | 0.470805 | 7_3:+74782925 | Msa1123800:CDS |
| GAATGGCATGGGCATATCAT+GGG | 0.474822 | 7_3:+74782985 | Msa1123800:CDS |
| CGCGAAGAGTCGAGAGTCGA+AGG | 0.475861 | 7_3:+74782829 | Msa1123800:CDS |
| GGGAGAGTAGTATTTGTGTT+GGG | 0.478013 | 7_3:+74782926 | Msa1123800:CDS |
| GGGATTTGCACTGTGAAAAT+GGG | 0.479435 | 7_3:-74785658 | None:intergenic |
| ATGGGGTATAATGATGATCA+TGG | 0.480640 | 7_3:+74783003 | Msa1123800:CDS |
| GGTCAATCCTGGTAGACAAC+TGG | 0.486687 | 7_3:-74784979 | None:intergenic |
| AAATAATCTTTGCTTCTCAA+AGG | 0.489359 | 7_3:-74785634 | None:intergenic |
| AGACAACTGGCTGACGTTGA+AGG | 0.491469 | 7_3:-74784966 | None:intergenic |
| ACGTCAGCCAGTTGTCTACC+AGG | 0.493612 | 7_3:+74784972 | Msa1123800:CDS |
| ATTGAAATTTCAAGTTTGAT+GGG | 0.493745 | 7_3:+74785577 | Msa1123800:CDS |
| TATTCACAACCAGTTGGAGT+TGG | 0.500442 | 7_3:+74783087 | Msa1123800:CDS |
| CGACGCTCCCCGTACTTACC+AGG | 0.500920 | 7_3:+74782783 | Msa1123800:CDS |
| ATACTGATGCTGCTCCTGCT+AGG | 0.512955 | 7_3:+74783169 | Msa1123800:CDS |
| AACCAAATTGTTGACCTTGG+AGG | 0.515992 | 7_3:-74783225 | None:intergenic |
| CTTCATCGCAGTCTCAATGC+TGG | 0.528653 | 7_3:+74783195 | Msa1123800:CDS |
| CTGCGATGAAGAATCCTAGC+AGG | 0.528957 | 7_3:-74783183 | None:intergenic |
| GATGTTTGGGAGGGAAGTCA+TGG | 0.529266 | 7_3:-74782593 | None:intergenic |
| CCCCGTACTTACCAGGAGGT+CGG | 0.536020 | 7_3:+74782790 | Msa1123800:CDS |
| AGCTGATTGTCAGTGGAGAA+GGG | 0.540667 | 7_3:+74782863 | Msa1123800:CDS |
| CCGAATCGTAACTGCTTCAC+CGG | 0.541881 | 7_3:-74782905 | None:intergenic |
| ATTGAGGTTATGGTCAATCC+TGG | 0.543767 | 7_3:-74784990 | None:intergenic |
| ATGCTGGTTCTGCTCCTCCA+AGG | 0.545858 | 7_3:+74783211 | Msa1123800:CDS |
| CTTCGTTGTTGATGTTTGGG+AGG | 0.546139 | 7_3:-74782603 | None:intergenic |
| CTCAAAGGGGATGAAAATGA+TGG | 0.547136 | 7_3:-74785619 | None:intergenic |
| GTCGTCTTCGTCATCATCAT+CGG | 0.554571 | 7_3:-74782764 | None:intergenic |
| TAGTTGTAGAACCCAAATTG+AGG | 0.555399 | 7_3:-74785006 | None:intergenic |
| CTCGAGGTGGGTGGTTGTGG+AGG | 0.556596 | 7_3:-74782632 | None:intergenic |
| TATGTTGTGTGGGAATGGCA+TGG | 0.562974 | 7_3:+74782973 | Msa1123800:CDS |
| GGAAGGGGAGTATGTTGTGT+GGG | 0.567393 | 7_3:+74782963 | Msa1123800:CDS |
| GTGTCATGACGATGAGGAAG+GGG | 0.570208 | 7_3:+74782948 | Msa1123800:CDS |
| TTCGTTGTTGATGTTTGGGA+GGG | 0.579691 | 7_3:-74782602 | None:intergenic |
| AATTGGGAGAGCATCCCTCT+CGG | 0.583194 | 7_3:-74784942 | None:intergenic |
| CGTCCTTATTCACAACCAGT+TGG | 0.586989 | 7_3:+74783081 | Msa1123800:CDS |
| TGTGAATAAGGACGCTCCGA+AGG | 0.588363 | 7_3:-74783072 | None:intergenic |
| TGAAGCTGATGTTGTCAGCA+AGG | 0.589393 | 7_3:+74783119 | Msa1123800:CDS |
| GCGAAGAGTCGAGAGTCGAA+GGG | 0.589719 | 7_3:+74782830 | Msa1123800:CDS |
| CGAGTAAGAGATTCTCGAGG+TGG | 0.590939 | 7_3:-74782645 | None:intergenic |
| GGGTGTCATGACGATGAGGA+AGG | 0.592367 | 7_3:+74782946 | Msa1123800:CDS |
| GTTTGATGGGTTGCAAGCAG+AGG | 0.599701 | 7_3:+74785590 | Msa1123800:CDS |
| TGGGGTATAATGATGATCAT+GGG | 0.601518 | 7_3:+74783004 | Msa1123800:CDS |
| CATGAACTGCATGGCCGAGA+GGG | 0.603779 | 7_3:+74784928 | Msa1123800:CDS |
| GCTGATTGTCAGTGGAGAAG+GGG | 0.605349 | 7_3:+74782864 | Msa1123800:CDS |
| GAAGCTGATGTTGTCAGCAA+GGG | 0.607695 | 7_3:+74783120 | Msa1123800:CDS |
| TAATTCCCATAAATATACTC+AGG | 0.608602 | 7_3:-74783033 | None:intergenic |
| ATTATCAAGCTGATTGTCAG+TGG | 0.609061 | 7_3:+74782856 | Msa1123800:CDS |
| ATAATCTTTGCTTCTCAAAG+GGG | 0.611929 | 7_3:-74785632 | None:intergenic |
| ATGTTGTGTGGGAATGGCAT+GGG | 0.613843 | 7_3:+74782974 | Msa1123800:CDS |
| GGTGTCATGACGATGAGGAA+GGG | 0.614911 | 7_3:+74782947 | Msa1123800:CDS |
| AATGGCATGGGCATATCATG+GGG | 0.631702 | 7_3:+74782986 | Msa1123800:CDS |
| AGGAAGGGGAGTATGTTGTG+TGG | 0.641212 | 7_3:+74782962 | Msa1123800:CDS |
| GCCGAAAAGGAAATCCTCGA+AGG | 0.646398 | 7_3:-74782740 | None:intergenic |
| CGAAGAGTCGAGAGTCGAAG+GGG | 0.646968 | 7_3:+74782831 | Msa1123800:CDS |
| TAAGAGATTCTCGAGGTGGG+TGG | 0.661338 | 7_3:-74782641 | None:intergenic |
| GAGTAAGAGATTCTCGAGGT+GGG | 0.663187 | 7_3:-74782644 | None:intergenic |
| AAATTTGTGCATGAACTGCA+TGG | 0.671265 | 7_3:+74784919 | Msa1123800:CDS |
| TGAAATGAAAGAGATATGCA+GGG | 0.672780 | 7_3:-74782550 | None:intergenic |
| CGCTCCCCGTACTTACCAGG+AGG | 0.697086 | 7_3:+74782786 | Msa1123800:CDS |
| TGTTGGGTGTCATGACGATG+AGG | 0.711770 | 7_3:+74782942 | Msa1123800:CDS |
| GCATGAACTGCATGGCCGAG+AGG | 0.734910 | 7_3:+74784927 | Msa1123800:CDS |
| TTTCGAGTAAGAGATTCTCG+AGG | 0.744371 | 7_3:-74782648 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAATTTTATTCCTT+TGG | + | chr7_3:74783257-74783276 | Msa1123800:intron | 10.0% |
| !!! | TTATGGTTTAAAATACAATT+TGG | + | chr7_3:74783801-74783820 | Msa1123800:intron | 15.0% |
| !!! | TATGGTTTAAAATACAATTT+GGG | + | chr7_3:74783802-74783821 | Msa1123800:intron | 15.0% |
| !!! | TTTTGGTAATTTAATGAATT+CGG | + | chr7_3:74783926-74783945 | Msa1123800:intron | 15.0% |
| !!! | AGTATTTTAAACCATATTTA+GGG | - | chr7_3:74784602-74784621 | None:intergenic | 15.0% |
| !!! | TAGTATTTTAAACCATATTT+AGG | - | chr7_3:74784603-74784622 | None:intergenic | 15.0% |
| !!! | AATATGGTTTAAAATACTAT+TGG | + | chr7_3:74784604-74784623 | Msa1123800:intron | 15.0% |
| !! | TAAGGTTGTTAAATGAATAT+CGG | - | chr7_3:74783839-74783858 | None:intergenic | 20.0% |
| !! | AATCACTCTAGTTATTAAAT+GGG | + | chr7_3:74784378-74784397 | Msa1123800:intron | 20.0% |
| !!! | TAATTTAACTTCCCTAAATA+TGG | + | chr7_3:74784588-74784607 | Msa1123800:intron | 20.0% |
| !!! | TTTTGGTAATTTAACGAATT+CGG | + | chr7_3:74784733-74784752 | Msa1123800:intron | 20.0% |
| !!! | TGAGCTTTAATTAAACAAAA+AGG | - | chr7_3:74785180-74785199 | None:intergenic | 20.0% |
| !! | TTGTTTAATTAAAGCTCAAA+TGG | + | chr7_3:74785182-74785201 | Msa1123800:intron | 20.0% |
| !! | TGTTTAATTAAAGCTCAAAT+GGG | + | chr7_3:74785183-74785202 | Msa1123800:intron | 20.0% |
| !!! | TAAAAGCACAAAAAGATTAT+AGG | - | chr7_3:74785357-74785376 | None:intergenic | 20.0% |
| !!! | ATCTTTTATGTTTTGATGTT+TGG | + | chr7_3:74785503-74785522 | Msa1123800:intron | 20.0% |
| !!! | ATTGAAATTTCAAGTTTGAT+GGG | + | chr7_3:74785577-74785596 | Msa1123800:CDS | 20.0% |
| !!! | CTTTAAAATCATACTTGTAA+AGG | + | chr7_3:74785714-74785733 | Msa1123800:three_prime_UTR | 20.0% |
| !!! | GAGACATGATTTTTTATTTT+TGG | + | chr7_3:74785741-74785760 | Msa1123800:three_prime_UTR | 20.0% |
| ! | TAATTCCCATAAATATACTC+AGG | - | chr7_3:74783036-74783055 | None:intergenic | 25.0% |
| !! | TTTATGGGAATTATTTTCAG+AGG | + | chr7_3:74783043-74783062 | Msa1123800:CDS | 25.0% |
| ! | ACAACAAAAAATCAAACCAA+AGG | - | chr7_3:74783276-74783295 | None:intergenic | 25.0% |
| !! | GTGAATTTTGTTAGATTGTT+TGG | + | chr7_3:74783305-74783324 | Msa1123800:intron | 25.0% |
| !! | AATTTTGTTAGATTGTTTGG+TGG | + | chr7_3:74783308-74783327 | Msa1123800:intron | 25.0% |
| !! | ATTTTGTTAGATTGTTTGGT+GGG | + | chr7_3:74783309-74783328 | Msa1123800:intron | 25.0% |
| !! | TGGATTTAAAGTTATTGATC+CGG | + | chr7_3:74783602-74783621 | Msa1123800:intron | 25.0% |
| !!! | TATTTTAACTTCTCCAAATG+TGG | + | chr7_3:74783777-74783796 | Msa1123800:intron | 25.0% |
| ! | TTTAAACCATAAACCACATT+TGG | - | chr7_3:74783793-74783812 | None:intergenic | 25.0% |
| ! | ATTCAAAACACAATCTTGAT+AGG | - | chr7_3:74784011-74784030 | None:intergenic | 25.0% |
| ! | AATTAGCAAATTGAAACCAT+TGG | - | chr7_3:74784074-74784093 | None:intergenic | 25.0% |
| ! | CTAAAATGATAGGTACAATT+GGG | + | chr7_3:74784288-74784307 | Msa1123800:intron | 25.0% |
| !! | TTTGTTATCTACATCAAATG+AGG | - | chr7_3:74784352-74784371 | None:intergenic | 25.0% |
| ! | CAATCACTCTAGTTATTAAA+TGG | + | chr7_3:74784377-74784396 | Msa1123800:intron | 25.0% |
| !!! | GGATGTGTTGATTTTTATTA+TGG | + | chr7_3:74784489-74784508 | Msa1123800:intron | 25.0% |
| ! | TCTAAAAATGTGATTCTTGT+CGG | + | chr7_3:74784700-74784719 | Msa1123800:intron | 25.0% |
| ! | ACATAAAAGATTCATTTCAG+TGG | - | chr7_3:74785494-74785513 | None:intergenic | 25.0% |
| !!! | CATTGAAATTTCAAGTTTGA+TGG | + | chr7_3:74785576-74785595 | Msa1123800:CDS | 25.0% |
| ! | AATAATCTTTGCTTCTCAAA+GGG | - | chr7_3:74785636-74785655 | None:intergenic | 25.0% |
| ! | AAATAATCTTTGCTTCTCAA+AGG | - | chr7_3:74785637-74785656 | None:intergenic | 25.0% |
| !! | ACAGATGCAATCTTAATTTT+GGG | - | chr7_3:74785681-74785700 | None:intergenic | 25.0% |
| !! | AACAGATGCAATCTTAATTT+TGG | - | chr7_3:74785682-74785701 | None:intergenic | 25.0% |
| ! | AGTTATTAAAAAACCATGTC+TGG | - | chr7_3:74785773-74785792 | None:intergenic | 25.0% |
| ! | AATAACTCATTATCTTTGCT+TGG | + | chr7_3:74785786-74785805 | Msa1123800:three_prime_UTR | 25.0% |
| GTGAATTGTGAAATGGAAAT+GGG | - | chr7_3:74782526-74782545 | None:intergenic | 30.0% | |
| TGTGAATTGTGAAATGGAAA+TGG | - | chr7_3:74782527-74782546 | None:intergenic | 30.0% | |
| TGAAATGAAAGAGATATGCA+GGG | - | chr7_3:74782553-74782572 | None:intergenic | 30.0% | |
| AATCTTCGTTGTTGATGTTT+GGG | - | chr7_3:74782609-74782628 | None:intergenic | 30.0% | |
| ! | AAGTTGAATCCTTTTCATCA+AGG | - | chr7_3:74782674-74782693 | None:intergenic | 30.0% |
| ! | TTTTCGCCTGAGTATATTTA+TGG | + | chr7_3:74783027-74783046 | Msa1123800:CDS | 30.0% |
| TTTCGCCTGAGTATATTTAT+GGG | + | chr7_3:74783028-74783047 | Msa1123800:CDS | 30.0% | |
| AAAAACCAAATTGTTGACCT+TGG | - | chr7_3:74783231-74783250 | None:intergenic | 30.0% | |
| TGTAGATGAATTTAGCTGTT+AGG | + | chr7_3:74783420-74783439 | Msa1123800:intron | 30.0% | |
| TTGAGCTATTAGATGAAGAT+TGG | + | chr7_3:74783582-74783601 | Msa1123800:intron | 30.0% | |
| CATTAAATTACCAAAACCCA+TGG | - | chr7_3:74783922-74783941 | None:intergenic | 30.0% | |
| !! | TCAAGATTGTGTTTTGAATC+TGG | + | chr7_3:74784012-74784031 | Msa1123800:intron | 30.0% |
| ! | GTTTAGGATGCTAAAATGAT+AGG | + | chr7_3:74784278-74784297 | Msa1123800:intron | 30.0% |
| GCTAAAATGATAGGTACAAT+TGG | + | chr7_3:74784287-74784306 | Msa1123800:intron | 30.0% | |
| AACACAATAACAACATGGTT+TGG | - | chr7_3:74784529-74784548 | None:intergenic | 30.0% | |
| CATTGAACACAATAACAACA+TGG | - | chr7_3:74784534-74784553 | None:intergenic | 30.0% | |
| ! | CATGTTGTTATTGTGTTCAA+TGG | + | chr7_3:74784532-74784551 | Msa1123800:intron | 30.0% |
| CGTTAAATTACCAAAATCCA+TGG | - | chr7_3:74784729-74784748 | None:intergenic | 30.0% | |
| AATCTTGATATGTGAGACAT+AGG | - | chr7_3:74784806-74784825 | None:intergenic | 30.0% | |
| !! | TCAAGATTGTGTTTTGAATC+TGG | + | chr7_3:74784012-74784031 | Msa1123800:intron | 30.0% |
| ATTGACCATAACCTCAATTT+GGG | + | chr7_3:74784995-74785014 | Msa1123800:CDS | 30.0% | |
| TAATTTCCGATGATGTAACA+GGG | - | chr7_3:74785125-74785144 | None:intergenic | 30.0% | |
| ATAATTTCCGATGATGTAAC+AGG | - | chr7_3:74785126-74785145 | None:intergenic | 30.0% | |
| ATAATCTTTGCTTCTCAAAG+GGG | - | chr7_3:74785635-74785654 | None:intergenic | 30.0% | |
| !! | GGGTTTTGTGAATTGTGAAA+TGG | - | chr7_3:74782533-74782552 | None:intergenic | 35.0% |
| GTGAAATGAAAGAGATATGC+AGG | - | chr7_3:74782554-74782573 | None:intergenic | 35.0% | |
| GAATCTTCGTTGTTGATGTT+TGG | - | chr7_3:74782610-74782629 | None:intergenic | 35.0% | |
| TACTCGAAACCTTGATGAAA+AGG | + | chr7_3:74782662-74782681 | Msa1123800:CDS | 35.0% | |
| ! | GAAATCCTCGAAGGATTTTT+GGG | - | chr7_3:74782734-74782753 | None:intergenic | 35.0% |
| ATTATCAAGCTGATTGTCAG+TGG | + | chr7_3:74782856-74782875 | Msa1123800:CDS | 35.0% | |
| ATGGGGTATAATGATGATCA+TGG | + | chr7_3:74783003-74783022 | Msa1123800:CDS | 35.0% | |
| TGGGGTATAATGATGATCAT+GGG | + | chr7_3:74783004-74783023 | Msa1123800:CDS | 35.0% | |
| GAATTTAGCTGTTAGGAAGT+TGG | + | chr7_3:74783427-74783446 | Msa1123800:intron | 35.0% | |
| ! | GAAGTTGGATTTTCTGTTCT+GGG | + | chr7_3:74783442-74783461 | Msa1123800:intron | 35.0% |
| ! | GTTCTGGGTTTAAGATGTTT+AGG | + | chr7_3:74783457-74783476 | Msa1123800:intron | 35.0% |
| ! | GTTTAAGATGTTTAGGTGGT+AGG | + | chr7_3:74783464-74783483 | Msa1123800:intron | 35.0% |
| GTAGATAATAAATGACGACG+CGG | + | chr7_3:74783541-74783560 | Msa1123800:intron | 35.0% | |
| CCATGAAGTCTCTATCAAAT+TGG | - | chr7_3:74783644-74783663 | None:intergenic | 35.0% | |
| CCAATTTGATAGAGACTTCA+TGG | + | chr7_3:74783641-74783660 | Msa1123800:intron | 35.0% | |
| TTGATAGAGACTTCATGGAA+CGG | + | chr7_3:74783646-74783665 | Msa1123800:intron | 35.0% | |
| CATTGAACACAACAACAACA+GGG | - | chr7_3:74783719-74783738 | None:intergenic | 35.0% | |
| !! | GTTCAATGGATTGATGTTGT+TGG | + | chr7_3:74783731-74783750 | Msa1123800:intron | 35.0% |
| ACTTCTCCAAATGTGGTTTA+TGG | + | chr7_3:74783784-74783803 | Msa1123800:intron | 35.0% | |
| AGTCACAACTTAAGTAGTTG+CGG | - | chr7_3:74783865-74783884 | None:intergenic | 35.0% | |
| TTGAATCTGGTTGCTGATAT+TGG | + | chr7_3:74784025-74784044 | Msa1123800:intron | 35.0% | |
| GTCAATATGTCTTCATCCAA+TGG | + | chr7_3:74784055-74784074 | Msa1123800:intron | 35.0% | |
| !!! | AGAACCAAATTTTGAGGTCA+TGG | - | chr7_3:74784205-74784224 | None:intergenic | 35.0% |
| ! | GTTGCTAGAACCAAATTTTG+AGG | - | chr7_3:74784211-74784230 | None:intergenic | 35.0% |
| GGATGAAGTTTGGATCAAAT+TGG | - | chr7_3:74784460-74784479 | None:intergenic | 35.0% | |
| CTGATCTTCATCTAATGACA+TGG | - | chr7_3:74784560-74784579 | None:intergenic | 35.0% | |
| TAGGGAAGTTAAATTACGAG+TGG | - | chr7_3:74784584-74784603 | None:intergenic | 35.0% | |
| CTAGGTTATTGGATGAAGAT+CGG | - | chr7_3:74784642-74784661 | None:intergenic | 35.0% | |
| AAATTTGTGCATGAACTGCA+TGG | + | chr7_3:74784919-74784938 | Msa1123800:CDS | 35.0% | |
| GATTGACCATAACCTCAATT+TGG | + | chr7_3:74784994-74785013 | Msa1123800:CDS | 35.0% | |
| TAGAACCCAAATTGAGGTTA+TGG | - | chr7_3:74785003-74785022 | None:intergenic | 35.0% | |
| TAGTTGTAGAACCCAAATTG+AGG | - | chr7_3:74785009-74785028 | None:intergenic | 35.0% | |
| AGTTTATTTGTGTGTGTGTG+TGG | + | chr7_3:74785029-74785048 | Msa1123800:intron | 35.0% | |
| GTTTATTTGTGTGTGTGTGT+GGG | + | chr7_3:74785030-74785049 | Msa1123800:intron | 35.0% | |
| CGGAAATTATGTACTTGTGT+TGG | + | chr7_3:74785136-74785155 | Msa1123800:intron | 35.0% | |
| GTTGGTTGCTATGGTTAATT+TGG | + | chr7_3:74785154-74785173 | Msa1123800:intron | 35.0% | |
| ATTTCTTACATGTGTAGCTC+TGG | - | chr7_3:74785229-74785248 | None:intergenic | 35.0% | |
| AGCTACACATGTAAGAAATG+TGG | + | chr7_3:74785230-74785249 | Msa1123800:intron | 35.0% | |
| TAAATGATCTGTTAGCAGTG+CGG | - | chr7_3:74785297-74785316 | None:intergenic | 35.0% | |
| !!! | GAAATGTTTTGTTTTCCCTG+TGG | + | chr7_3:74785399-74785418 | Msa1123800:intron | 35.0% |
| ! | TTCTTAGCATTTTTGTCACC+TGG | + | chr7_3:74785444-74785463 | Msa1123800:intron | 35.0% |
| TGCACTTAATGCAATAAACC+AGG | - | chr7_3:74785465-74785484 | None:intergenic | 35.0% | |
| ACTTCTATGCTGAAATTGAC+AGG | + | chr7_3:74785538-74785557 | Msa1123800:intron | 35.0% | |
| ! | TTTTTGGATACAACCAGACA+TGG | + | chr7_3:74785757-74785776 | Msa1123800:three_prime_UTR | 35.0% |
| TTCGTTGTTGATGTTTGGGA+GGG | - | chr7_3:74782605-74782624 | None:intergenic | 40.0% | |
| ! | TTTCGAGTAAGAGATTCTCG+AGG | - | chr7_3:74782651-74782670 | None:intergenic | 40.0% |
| ! | GGAAATCCTCGAAGGATTTT+TGG | - | chr7_3:74782735-74782754 | None:intergenic | 40.0% |
| ! | TCCTTCGAGGATTTCCTTTT+CGG | + | chr7_3:74782739-74782758 | Msa1123800:CDS | 40.0% |
| GGGAGAGTAGTATTTGTGTT+GGG | + | chr7_3:74782926-74782945 | Msa1123800:CDS | 40.0% | |
| ACTCCAACTGGTTGTGAATA+AGG | - | chr7_3:74783087-74783106 | None:intergenic | 40.0% | |
| TATTCACAACCAGTTGGAGT+TGG | + | chr7_3:74783087-74783106 | Msa1123800:CDS | 40.0% | |
| AACCAAATTGTTGACCTTGG+AGG | - | chr7_3:74783228-74783247 | None:intergenic | 40.0% | |
| ! | GGAAGTTGGATTTTCTGTTC+TGG | + | chr7_3:74783441-74783460 | Msa1123800:intron | 40.0% |
| ! | CTGGGTTTAAGATGTTTAGG+TGG | + | chr7_3:74783460-74783479 | Msa1123800:intron | 40.0% |
| TTTAGGTGGTAGGCACAAAT+AGG | + | chr7_3:74783474-74783493 | Msa1123800:intron | 40.0% | |
| TTAGGTGGTAGGCACAAATA+GGG | + | chr7_3:74783475-74783494 | Msa1123800:intron | 40.0% | |
| TACATCAAATGAGCTTCCCT+AGG | - | chr7_3:74783524-74783543 | None:intergenic | 40.0% | |
| CTCTATCAAATTGGAGCCAT+TGG | - | chr7_3:74783635-74783654 | None:intergenic | 40.0% | |
| AACACAACAACAACAGGGTT+TGG | - | chr7_3:74783714-74783733 | None:intergenic | 40.0% | |
| CCATTGAACACAACAACAAC+AGG | - | chr7_3:74783720-74783739 | None:intergenic | 40.0% | |
| ! | CCTGTTGTTGTTGTGTTCAA+TGG | + | chr7_3:74783717-74783736 | Msa1123800:intron | 40.0% |
| CTTAAGTAGTTGCGGATCTA+AGG | - | chr7_3:74783857-74783876 | None:intergenic | 40.0% | |
| TCCAAAGTCGTGATTCTTGT+CGG | + | chr7_3:74783893-74783912 | Msa1123800:intron | 40.0% | |
| TGATTCTTGTCGGAAACCAT+GGG | + | chr7_3:74783903-74783922 | Msa1123800:intron | 40.0% | |
| TTGATCATAGTCGCTTCAGT+TGG | + | chr7_3:74783966-74783985 | Msa1123800:intron | 40.0% | |
| TTGGCCATGACCTCAAAATT+TGG | + | chr7_3:74784198-74784217 | Msa1123800:intron | 40.0% | |
| TGTGGATGAATTTGGCTGTT+AGG | + | chr7_3:74784241-74784260 | Msa1123800:intron | 40.0% | |
| GAATTTGGCTGTTAGGAAGT+TGG | + | chr7_3:74784248-74784267 | Msa1123800:intron | 40.0% | |
| GGAAGTTGGATCACATGTTT+AGG | + | chr7_3:74784262-74784281 | Msa1123800:intron | 40.0% | |
| GGGAGCTATTTGATGAAGAT+TGG | + | chr7_3:74784398-74784417 | Msa1123800:intron | 40.0% | |
| TTGGATCAAATTGGAACCAC+TGG | - | chr7_3:74784451-74784470 | None:intergenic | 40.0% | |
| TTGATCCAAACTTCATCCGA+CGG | + | chr7_3:74784462-74784481 | Msa1123800:intron | 40.0% | |
| CACAGCTACTGAAATTGTGA+CGG | + | chr7_3:74784670-74784689 | Msa1123800:intron | 40.0% | |
| ! | TTGTCGGAAACCATGGATTT+TGG | + | chr7_3:74784716-74784735 | Msa1123800:intron | 40.0% |
| ATTGAGGTTATGGTCAATCC+TGG | - | chr7_3:74784993-74785012 | None:intergenic | 40.0% | |
| ! | TTTTGAGCTTATGTGTTGCG+TGG | + | chr7_3:74785089-74785108 | Msa1123800:intron | 40.0% |
| !! | TGTACTTGTGTTGGTTGCTA+TGG | + | chr7_3:74785145-74785164 | Msa1123800:intron | 40.0% |
| !!! | ATGTTTTGTTTTCCCTGTGG+TGG | + | chr7_3:74785402-74785421 | Msa1123800:intron | 40.0% |
| CTCAAAGGGGATGAAAATGA+TGG | - | chr7_3:74785622-74785641 | None:intergenic | 40.0% | |
| GGGATTTGCACTGTGAAAAT+GGG | - | chr7_3:74785661-74785680 | None:intergenic | 40.0% | |
| TGGGATTTGCACTGTGAAAA+TGG | - | chr7_3:74785662-74785681 | None:intergenic | 40.0% | |
| CTTCGTTGTTGATGTTTGGG+AGG | - | chr7_3:74782606-74782625 | None:intergenic | 45.0% | |
| GAGTAAGAGATTCTCGAGGT+GGG | - | chr7_3:74782647-74782666 | None:intergenic | 45.0% | |
| !! | CCTCGAAGGATTTTTGGGAA+GGG | - | chr7_3:74782729-74782748 | None:intergenic | 45.0% |
| !! | TCCTCGAAGGATTTTTGGGA+AGG | - | chr7_3:74782730-74782749 | None:intergenic | 45.0% |
| GTCGTCTTCGTCATCATCAT+CGG | - | chr7_3:74782767-74782786 | None:intergenic | 45.0% | |
| AAGCTGATTGTCAGTGGAGA+AGG | + | chr7_3:74782862-74782881 | Msa1123800:CDS | 45.0% | |
| AGCTGATTGTCAGTGGAGAA+GGG | + | chr7_3:74782863-74782882 | Msa1123800:CDS | 45.0% | |
| GTAACTGCTTCACCGGAATT+CGG | - | chr7_3:74782901-74782920 | None:intergenic | 45.0% | |
| CGGGAGAGTAGTATTTGTGT+TGG | + | chr7_3:74782925-74782944 | Msa1123800:CDS | 45.0% | |
| TATGTTGTGTGGGAATGGCA+TGG | + | chr7_3:74782973-74782992 | Msa1123800:CDS | 45.0% | |
| ATGTTGTGTGGGAATGGCAT+GGG | + | chr7_3:74782974-74782993 | Msa1123800:CDS | 45.0% | |
| GAATGGCATGGGCATATCAT+GGG | + | chr7_3:74782985-74783004 | Msa1123800:CDS | 45.0% | |
| AATGGCATGGGCATATCATG+GGG | + | chr7_3:74782986-74783005 | Msa1123800:CDS | 45.0% | |
| ! | TTTTCAGAGGACTGTGCCTT+CGG | + | chr7_3:74783056-74783075 | Msa1123800:CDS | 45.0% |
| CGTCCTTATTCACAACCAGT+TGG | + | chr7_3:74783081-74783100 | Msa1123800:CDS | 45.0% | |
| TCTTCATCTCCAACTCCAAC+TGG | - | chr7_3:74783099-74783118 | None:intergenic | 45.0% | |
| TGAAGCTGATGTTGTCAGCA+AGG | + | chr7_3:74783119-74783138 | Msa1123800:CDS | 45.0% | |
| GAAGCTGATGTTGTCAGCAA+GGG | + | chr7_3:74783120-74783139 | Msa1123800:CDS | 45.0% | |
| TGTTGTCAGCAAGGGTTTGA+AGG | + | chr7_3:74783128-74783147 | Msa1123800:CDS | 45.0% | |
| CTCCTCCAAGGTCAACAATT+TGG | + | chr7_3:74783223-74783242 | Msa1123800:intron | 45.0% | |
| GGTAGGCACAAATAGGGTTT+CGG | + | chr7_3:74783481-74783500 | Msa1123800:intron | 45.0% | |
| TTGATCCGGTCTTCATCCAA+TGG | + | chr7_3:74783616-74783635 | Msa1123800:intron | 45.0% | |
| TCCGACAAGAATCACGACTT+TGG | - | chr7_3:74783897-74783916 | None:intergenic | 45.0% | |
| GTGATTCTTGTCGGAAACCA+TGG | + | chr7_3:74783902-74783921 | Msa1123800:intron | 45.0% | |
| ! | TTGTCGGAAACCATGGGTTT+TGG | + | chr7_3:74783909-74783928 | Msa1123800:intron | 45.0% |
| CCTGAACTGCATAACTGAGA+GGG | + | chr7_3:74784129-74784148 | Msa1123800:intron | 45.0% | |
| TCCTTCGCTGTGGATGAATT+TGG | + | chr7_3:74784233-74784252 | Msa1123800:intron | 45.0% | |
| CCGAGATAACAACCTGGTTT+GGG | - | chr7_3:74784325-74784344 | None:intergenic | 45.0% | |
| CCCAAACCAGGTTGTTATCT+CGG | + | chr7_3:74784322-74784341 | Msa1123800:intron | 45.0% | |
| CCAAACCAGGTTGTTATCTC+GGG | + | chr7_3:74784323-74784342 | Msa1123800:intron | 45.0% | |
| CAAACCAGGTTGTTATCTCG+GGG | + | chr7_3:74784324-74784343 | Msa1123800:intron | 45.0% | |
| ATCAACACATCCACTACCGT+CGG | - | chr7_3:74784481-74784500 | None:intergenic | 45.0% | |
| GTGTCGTGGATCTAGGTTAT+TGG | - | chr7_3:74784653-74784672 | None:intergenic | 45.0% | |
| CAATTTCAGTAGCTGTGTCG+TGG | - | chr7_3:74784667-74784686 | None:intergenic | 45.0% | |
| GTGATTCTTGTCGGAAACCA+TGG | + | chr7_3:74783902-74783921 | Msa1123800:intron | 45.0% | |
| CCAACTGAAGTGACTGTGAT+TGG | - | chr7_3:74784775-74784794 | None:intergenic | 45.0% | |
| CCAATCACAGTCACTTCAGT+TGG | + | chr7_3:74784772-74784791 | Msa1123800:intron | 45.0% | |
| TATTTGTGTGTGTGTGTGGG+TGG | + | chr7_3:74785033-74785052 | Msa1123800:intron | 45.0% | |
| ATTTGTGTGTGTGTGTGGGT+GGG | + | chr7_3:74785034-74785053 | Msa1123800:intron | 45.0% | |
| CCAACACCCTGTTACATCAT+CGG | + | chr7_3:74785116-74785135 | Msa1123800:intron | 45.0% | |
| AAAGCTCAAATGGGCGATGA+AGG | + | chr7_3:74785192-74785211 | Msa1123800:intron | 45.0% | |
| TAAGTTGTCTTGCCACCACA+GGG | - | chr7_3:74785417-74785436 | None:intergenic | 45.0% | |
| GATGTTTGGGAGGGAAGTCA+TGG | - | chr7_3:74782596-74782615 | None:intergenic | 50.0% | |
| TAAGAGATTCTCGAGGTGGG+TGG | - | chr7_3:74782644-74782663 | None:intergenic | 50.0% | |
| CGAGTAAGAGATTCTCGAGG+TGG | - | chr7_3:74782648-74782667 | None:intergenic | 50.0% | |
| CTGTCGTCATTGACGTTGTC+TGG | - | chr7_3:74782703-74782722 | None:intergenic | 50.0% | |
| CCCTTCCCAAAAATCCTTCG+AGG | + | chr7_3:74782726-74782745 | Msa1123800:CDS | 50.0% | |
| GCCGAAAAGGAAATCCTCGA+AGG | - | chr7_3:74782743-74782762 | None:intergenic | 50.0% | |
| CATCATCATCGGAGCCGAAA+AGG | - | chr7_3:74782756-74782775 | None:intergenic | 50.0% | |
| GCTGATTGTCAGTGGAGAAG+GGG | + | chr7_3:74782864-74782883 | Msa1123800:CDS | 50.0% | |
| GATACGCTGAAGCCGAATTC+CGG | + | chr7_3:74782886-74782905 | Msa1123800:CDS | 50.0% | |
| CCGAATCGTAACTGCTTCAC+CGG | - | chr7_3:74782908-74782927 | None:intergenic | 50.0% | |
| CCGGTGAAGCAGTTACGATT+CGG | + | chr7_3:74782905-74782924 | Msa1123800:CDS | 50.0% | |
| CGGTGAAGCAGTTACGATTC+GGG | + | chr7_3:74782906-74782925 | Msa1123800:CDS | 50.0% | |
| ! | TGTTGGGTGTCATGACGATG+AGG | + | chr7_3:74782942-74782961 | Msa1123800:CDS | 50.0% |
| ! | GGTGTCATGACGATGAGGAA+GGG | + | chr7_3:74782947-74782966 | Msa1123800:CDS | 50.0% |
| GTGTCATGACGATGAGGAAG+GGG | + | chr7_3:74782948-74782967 | Msa1123800:CDS | 50.0% | |
| ! | AGGAAGGGGAGTATGTTGTG+TGG | + | chr7_3:74782962-74782981 | Msa1123800:CDS | 50.0% |
| ! | GGAAGGGGAGTATGTTGTGT+GGG | + | chr7_3:74782963-74782982 | Msa1123800:CDS | 50.0% |
| ! | GGGAGTATGTTGTGTGGGAA+TGG | + | chr7_3:74782968-74782987 | Msa1123800:CDS | 50.0% |
| GGAATGGCATGGGCATATCA+TGG | + | chr7_3:74782984-74783003 | Msa1123800:CDS | 50.0% | |
| TGTGAATAAGGACGCTCCGA+AGG | - | chr7_3:74783075-74783094 | None:intergenic | 50.0% | |
| ATACTGATGCTGCTCCTGCT+AGG | + | chr7_3:74783169-74783188 | Msa1123800:CDS | 50.0% | |
| CTGCGATGAAGAATCCTAGC+AGG | - | chr7_3:74783186-74783205 | None:intergenic | 50.0% | |
| CTTCATCGCAGTCTCAATGC+TGG | + | chr7_3:74783195-74783214 | Msa1123800:CDS | 50.0% | |
| AATAGGGTTTCGGAACACCC+TGG | + | chr7_3:74783491-74783510 | Msa1123800:intron | 50.0% | |
| AACACCCTGGTTGTGATCCT+AGG | + | chr7_3:74783504-74783523 | Msa1123800:intron | 50.0% | |
| ACACCCTGGTTGTGATCCTA+GGG | + | chr7_3:74783505-74783524 | Msa1123800:intron | 50.0% | |
| CTTCCCTAGGATCACAACCA+GGG | - | chr7_3:74783511-74783530 | None:intergenic | 50.0% | |
| TGGAGCCATTGGATGAAGAC+CGG | - | chr7_3:74783624-74783643 | None:intergenic | 50.0% | |
| GCCTGAACTGCATAACTGAG+AGG | + | chr7_3:74784128-74784147 | Msa1123800:intron | 50.0% | |
| CCCTCTCAGTTATGCAGTTC+AGG | - | chr7_3:74784132-74784151 | None:intergenic | 50.0% | |
| CTAGCAACTTTCCTTCGCTG+TGG | + | chr7_3:74784223-74784242 | Msa1123800:intron | 50.0% | |
| GCCAAATTCATCCACAGCGA+AGG | - | chr7_3:74784237-74784256 | None:intergenic | 50.0% | |
| !! | AACAACCTGGTTTGGGCGTT+CGG | - | chr7_3:74784318-74784337 | None:intergenic | 50.0% |
| CCCGAGATAACAACCTGGTT+TGG | - | chr7_3:74784326-74784345 | None:intergenic | 50.0% | |
| TTGATCCGATCGTCATCCAG+TGG | + | chr7_3:74784432-74784451 | Msa1123800:intron | 50.0% | |
| TGGAACCACTGGATGACGAT+CGG | - | chr7_3:74784440-74784459 | None:intergenic | 50.0% | |
| CACTACCGTCGGATGAAGTT+TGG | - | chr7_3:74784470-74784489 | None:intergenic | 50.0% | |
| CAAACTTCATCCGACGGTAG+TGG | + | chr7_3:74784468-74784487 | Msa1123800:intron | 50.0% | |
| AGTAGCTGTGTCGTGGATCT+AGG | - | chr7_3:74784660-74784679 | None:intergenic | 50.0% | |
| !! | AATTGGGAGAGCATCCCTCT+CGG | - | chr7_3:74784945-74784964 | None:intergenic | 50.0% |
| GGCTGACGTTGAAGGCAATT+GGG | - | chr7_3:74784961-74784980 | None:intergenic | 50.0% | |
| TGGCTGACGTTGAAGGCAAT+TGG | - | chr7_3:74784962-74784981 | None:intergenic | 50.0% | |
| AGACAACTGGCTGACGTTGA+AGG | - | chr7_3:74784969-74784988 | None:intergenic | 50.0% | |
| GGTCAATCCTGGTAGACAAC+TGG | - | chr7_3:74784982-74785001 | None:intergenic | 50.0% | |
| CCGATGATGTAACAGGGTGT+TGG | - | chr7_3:74785119-74785138 | None:intergenic | 50.0% | |
| CTAAGTTGTCTTGCCACCAC+AGG | - | chr7_3:74785418-74785437 | None:intergenic | 50.0% | |
| !! | GTTTGATGGGTTGCAAGCAG+AGG | + | chr7_3:74785590-74785609 | Msa1123800:CDS | 50.0% |
| ATTCTCGAGGTGGGTGGTTG+TGG | - | chr7_3:74782638-74782657 | None:intergenic | 55.0% | |
| GCGAAGAGTCGAGAGTCGAA+GGG | + | chr7_3:74782830-74782849 | Msa1123800:CDS | 55.0% | |
| CGAAGAGTCGAGAGTCGAAG+GGG | + | chr7_3:74782831-74782850 | Msa1123800:CDS | 55.0% | |
| ! | GGGTGTCATGACGATGAGGA+AGG | + | chr7_3:74782946-74782965 | Msa1123800:CDS | 55.0% |
| !! | ATGCTGGTTCTGCTCCTCCA+AGG | + | chr7_3:74783211-74783230 | Msa1123800:CDS | 55.0% |
| GCTTCCCTAGGATCACAACC+AGG | - | chr7_3:74783512-74783531 | None:intergenic | 55.0% | |
| ! | TTTGAGGTCATGGCCAACCC+CGG | - | chr7_3:74784195-74784214 | None:intergenic | 55.0% |
| !! | ACAACCTGGTTTGGGCGTTC+GGG | - | chr7_3:74784317-74784336 | None:intergenic | 55.0% |
| GGTTCCCCGAGATAACAACC+TGG | - | chr7_3:74784331-74784350 | None:intergenic | 55.0% | |
| CATGAACTGCATGGCCGAGA+GGG | + | chr7_3:74784928-74784947 | Msa1123800:CDS | 55.0% | |
| ACGTCAGCCAGTTGTCTACC+AGG | + | chr7_3:74784972-74784991 | Msa1123800:CDS | 55.0% | |
| CCGACCTCCTGGTAAGTACG+GGG | - | chr7_3:74782793-74782812 | None:intergenic | 60.0% | |
| CCCCGTACTTACCAGGAGGT+CGG | + | chr7_3:74782790-74782809 | Msa1123800:CDS | 60.0% | |
| CCCGACCTCCTGGTAAGTAC+GGG | - | chr7_3:74782794-74782813 | None:intergenic | 60.0% | |
| CCCGTACTTACCAGGAGGTC+GGG | + | chr7_3:74782791-74782810 | Msa1123800:CDS | 60.0% | |
| GCCCGACCTCCTGGTAAGTA+CGG | - | chr7_3:74782795-74782814 | None:intergenic | 60.0% | |
| TTGCTTTCTGCCCGACCTCC+TGG | - | chr7_3:74782804-74782823 | None:intergenic | 60.0% | |
| CGCGAAGAGTCGAGAGTCGA+AGG | + | chr7_3:74782829-74782848 | Msa1123800:CDS | 60.0% | |
| GGCTCGCGTGGAAGGTCATT+GGG | - | chr7_3:74784162-74784181 | None:intergenic | 60.0% | |
| TGGCTCGCGTGGAAGGTCAT+TGG | - | chr7_3:74784163-74784182 | None:intergenic | 60.0% | |
| AATGACCTTCCACGCGAGCC+AGG | + | chr7_3:74784162-74784181 | Msa1123800:intron | 60.0% | |
| ! | ACGCGAGCCAGGTTAGCTAC+CGG | + | chr7_3:74784173-74784192 | Msa1123800:intron | 60.0% |
| GATTCCCGAACGCCCAAACC+AGG | + | chr7_3:74784310-74784329 | Msa1123800:intron | 60.0% | |
| GCATGAACTGCATGGCCGAG+AGG | + | chr7_3:74784927-74784946 | Msa1123800:CDS | 60.0% | |
| TGTGTGTGTGTGTGGGTGGG+CGG | + | chr7_3:74785037-74785056 | Msa1123800:intron | 60.0% | |
| CTCGAGGTGGGTGGTTGTGG+AGG | - | chr7_3:74782635-74782654 | None:intergenic | 65.0% | |
| CGACGCTCCCCGTACTTACC+AGG | + | chr7_3:74782783-74782802 | Msa1123800:CDS | 65.0% | |
| CGCTCCCCGTACTTACCAGG+AGG | + | chr7_3:74782786-74782805 | Msa1123800:CDS | 65.0% | |
| ! | GCTAACCTGGCTCGCGTGGA+AGG | - | chr7_3:74784170-74784189 | None:intergenic | 65.0% |
| ! | GGTAGCTAACCTGGCTCGCG+TGG | - | chr7_3:74784174-74784193 | None:intergenic | 65.0% |
| ! | CGCGAGCCAGGTTAGCTACC+GGG | + | chr7_3:74784174-74784193 | Msa1123800:intron | 65.0% |
| ! | GCGAGCCAGGTTAGCTACCG+GGG | + | chr7_3:74784175-74784194 | Msa1123800:intron | 65.0% |
| ! | GCCAGGTTAGCTACCGGGGT+TGG | + | chr7_3:74784179-74784198 | Msa1123800:intron | 65.0% |
| GCCAACCCCGGTAGCTAACC+TGG | - | chr7_3:74784183-74784202 | None:intergenic | 65.0% | |
| GTGTGTGTGTGTGGGTGGGC+GGG | + | chr7_3:74785038-74785057 | Msa1123800:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 74782523 | 74785838 | 74782523 | ID=Msa1123800;Name=Msa1123800 |
| chr7_3 | mRNA | 74782523 | 74785838 | 74782523 | ID=Msa1123800-mRNA-1;Parent=Msa1123800;Name=Msa1123800-mRNA-1;_AED=0.07;_eAED=0.07;_QI=72|0|0.66|0.66|1|1|3|220|287 |
| chr7_3 | exon | 74782523 | 74783232 | 74782523 | ID=Msa1123800-mRNA-1:exon:19895;Parent=Msa1123800-mRNA-1 |
| chr7_3 | exon | 74784877 | 74785043 | 74784877 | ID=Msa1123800-mRNA-1:exon:19896;Parent=Msa1123800-mRNA-1 |
| chr7_3 | exon | 74785560 | 74785838 | 74785560 | ID=Msa1123800-mRNA-1:exon:19897;Parent=Msa1123800-mRNA-1 |
| chr7_3 | five_prime_UTR | 74782523 | 74782594 | 74782523 | ID=Msa1123800-mRNA-1:five_prime_utr;Parent=Msa1123800-mRNA-1 |
| chr7_3 | CDS | 74782595 | 74783232 | 74782595 | ID=Msa1123800-mRNA-1:cds;Parent=Msa1123800-mRNA-1 |
| chr7_3 | CDS | 74784877 | 74785043 | 74784877 | ID=Msa1123800-mRNA-1:cds;Parent=Msa1123800-mRNA-1 |
| chr7_3 | CDS | 74785560 | 74785618 | 74785560 | ID=Msa1123800-mRNA-1:cds;Parent=Msa1123800-mRNA-1 |
| chr7_3 | three_prime_UTR | 74785619 | 74785838 | 74785619 | ID=Msa1123800-mRNA-1:three_prime_utr;Parent=Msa1123800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
