Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385750 | XP_003625511.1 | 86.996 | 223 | 21 | 4 | 1 | 218 | 1 | 220 | 2.82e-116 | 343 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385750 | G7L0L4 | 86.996 | 223 | 21 | 4 | 1 | 218 | 1 | 220 | 1.35e-116 | 343 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1356150 | Msa1385750 | 0.873351 | 1.572301e-67 | -8.615850e-47 |
| Msa1385750 | Msa1409220 | 0.997423 | 2.852008e-242 | -8.615850e-47 |
| Msa1385750 | Msa1434120 | 0.995324 | 3.838211e-215 | -8.615850e-47 |
| Msa0648620 | Msa1385750 | 0.825335 | 4.958162e-54 | -8.615850e-47 |
| Msa0648670 | Msa1385750 | 0.830375 | 3.042157e-55 | -8.615850e-47 |
| Msa1123800 | Msa1385750 | 0.913792 | 4.076879e-84 | -8.615850e-47 |
| Msa1169940 | Msa1385750 | 0.997714 | 9.968315e-248 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385750 | MtrunA17_Chr7g0263051 | 86.996 | 223 | 21 | 4 | 1 | 218 | 1 | 220 | 2.59e-120 | 343 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385750 | AT3G53630.2 | 42.857 | 245 | 115 | 8 | 12 | 253 | 3 | 225 | 3.00e-48 | 160 |
| Msa1385750 | AT3G53630.1 | 46.569 | 204 | 94 | 6 | 12 | 214 | 3 | 192 | 3.36e-47 | 157 |
Find 96 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGATGCAATCTTAATTT+TGG | 0.074580 | tig0020776:-41460 | None:intergenic |
| GATTGACCATAACCTCAATT+TGG | 0.202384 | tig0020776:+40775 | Msa1385750:CDS |
| TGGGATTTGCACTGTGAAAA+TGG | 0.222632 | tig0020776:-41440 | None:intergenic |
| ACTCCAACTGGTTGTGAATA+AGG | 0.268058 | tig0020776:-38847 | None:intergenic |
| GAATCTTCGTTGTTGATGTT+TGG | 0.305644 | tig0020776:-38370 | None:intergenic |
| AACAATGGACCAGTATAAAA+AGG | 0.309171 | tig0020776:-41606 | None:intergenic |
| CATTGAAATTTCAAGTTTGA+TGG | 0.324699 | tig0020776:+41357 | Msa1385750:CDS |
| AATCTTCGTTGTTGATGTTT+GGG | 0.328350 | tig0020776:-38369 | None:intergenic |
| GTAACTGCTTCACCGGAATT+CGG | 0.343202 | tig0020776:-38661 | None:intergenic |
| CTGTCGTCATTGACGTTGTC+TGG | 0.355101 | tig0020776:-38463 | None:intergenic |
| TAGAACCCAAATTGAGGTTA+TGG | 0.365006 | tig0020776:-40781 | None:intergenic |
| TGTGAATTGTGAAATGGAAA+TGG | 0.366177 | tig0020776:-38287 | None:intergenic |
| TGGCTGACGTTGAAGGCAAT+TGG | 0.369030 | tig0020776:-40740 | None:intergenic |
| CGGTGAAGCAGTTACGATTC+GGG | 0.372928 | tig0020776:+38669 | Msa1385750:CDS |
| ATTGACCATAACCTCAATTT+GGG | 0.373255 | tig0020776:+40776 | Msa1385750:CDS |
| ATTCTCGAGGTGGGTGGTTG+TGG | 0.374448 | tig0020776:-38398 | None:intergenic |
| GATACGCTGAAGCCGAATTC+CGG | 0.405492 | tig0020776:+38649 | Msa1385750:CDS |
| AATAACTCATTATCTTTGCT+TGG | 0.411400 | tig0020776:+41567 | Msa1385750:three_prime_UTR |
| CCGGTGAAGCAGTTACGATT+CGG | 0.415694 | tig0020776:+38668 | Msa1385750:CDS |
| TACTCGAAACCTTGATGAAA+AGG | 0.423065 | tig0020776:+38425 | Msa1385750:CDS |
| GTGAATTGTGAAATGGAAAT+GGG | 0.424607 | tig0020776:-38286 | None:intergenic |
| AATAATCTTTGCTTCTCAAA+GGG | 0.425067 | tig0020776:-41414 | None:intergenic |
| TCTTCATCTCCAACTCCAAC+TGG | 0.432362 | tig0020776:-38859 | None:intergenic |
| TTTCGCCTGAGTATATTTAT+GGG | 0.433268 | tig0020776:+38791 | Msa1385750:CDS |
| GGAATGGCATGGGCATATCA+TGG | 0.438655 | tig0020776:+38747 | Msa1385750:CDS |
| GGCTGACGTTGAAGGCAATT+GGG | 0.439791 | tig0020776:-40739 | None:intergenic |
| CTTTAAAATCATACTTGTAA+AGG | 0.444260 | tig0020776:+41495 | Msa1385750:three_prime_UTR |
| TTGCTTTCTGCCCGACCTCC+TGG | 0.447681 | tig0020776:-38564 | None:intergenic |
| GTGAAATGAAAGAGATATGC+AGG | 0.447964 | tig0020776:-38314 | None:intergenic |
| GCCCGACCTCCTGGTAAGTA+CGG | 0.449996 | tig0020776:-38555 | None:intergenic |
| AAGCTGATTGTCAGTGGAGA+AGG | 0.455681 | tig0020776:+38625 | Msa1385750:CDS |
| CATCATCATCGGAGCCGAAA+AGG | 0.460905 | tig0020776:-38516 | None:intergenic |
| CCCGTACTTACCAGGAGGTC+GGG | 0.461045 | tig0020776:+38554 | Msa1385750:CDS |
| GGGAGTATGTTGTGTGGGAA+TGG | 0.467402 | tig0020776:+38731 | Msa1385750:CDS |
| TGTTGTCAGCAAGGGTTTGA+AGG | 0.470639 | tig0020776:+38903 | Msa1385750:CDS |
| CGGGAGAGTAGTATTTGTGT+TGG | 0.470805 | tig0020776:+38688 | Msa1385750:CDS |
| GAATGGCATGGGCATATCAT+GGG | 0.474822 | tig0020776:+38748 | Msa1385750:CDS |
| CGCGAAGAGTCGAGAGTCGA+AGG | 0.475861 | tig0020776:+38592 | Msa1385750:CDS |
| GGGAGAGTAGTATTTGTGTT+GGG | 0.478013 | tig0020776:+38689 | Msa1385750:CDS |
| GGGATTTGCACTGTGAAAAT+GGG | 0.479435 | tig0020776:-41439 | None:intergenic |
| ATGGGGTATAATGATGATCA+TGG | 0.480640 | tig0020776:+38766 | Msa1385750:CDS |
| GGTCAATCCTGGTAGACAAC+TGG | 0.486687 | tig0020776:-40760 | None:intergenic |
| AAATAATCTTTGCTTCTCAA+AGG | 0.489359 | tig0020776:-41415 | None:intergenic |
| AGACAACTGGCTGACGTTGA+AGG | 0.491469 | tig0020776:-40747 | None:intergenic |
| ACGTCAGCCAGTTGTCTACC+AGG | 0.493612 | tig0020776:+40753 | Msa1385750:CDS |
| ATTGAAATTTCAAGTTTGAT+GGG | 0.493745 | tig0020776:+41358 | Msa1385750:CDS |
| TATTCACAACCAGTTGGAGT+TGG | 0.500442 | tig0020776:+38850 | Msa1385750:CDS |
| CGACGCTCCCCGTACTTACC+AGG | 0.500920 | tig0020776:+38546 | Msa1385750:CDS |
| ATACTGATGCTGCTCCTGCT+AGG | 0.512955 | tig0020776:+38944 | Msa1385750:CDS |
| AACCAAATTGTTGACCTTGG+AGG | 0.515992 | tig0020776:-39000 | None:intergenic |
| CTTCATCGCAGTCTCAATGC+TGG | 0.528653 | tig0020776:+38970 | Msa1385750:CDS |
| CTGCGATGAAGAATCCTAGC+AGG | 0.528957 | tig0020776:-38958 | None:intergenic |
| GATGTTTGGGAGGGAAGTCA+TGG | 0.529266 | tig0020776:-38356 | None:intergenic |
| CCCCGTACTTACCAGGAGGT+CGG | 0.536020 | tig0020776:+38553 | Msa1385750:CDS |
| AGCTGATTGTCAGTGGAGAA+GGG | 0.540667 | tig0020776:+38626 | Msa1385750:CDS |
| CCGAATCGTAACTGCTTCAC+CGG | 0.541881 | tig0020776:-38668 | None:intergenic |
| ATTGAGGTTATGGTCAATCC+TGG | 0.543767 | tig0020776:-40771 | None:intergenic |
| ATGCTGGTTCTGCTCCTCCA+AGG | 0.545858 | tig0020776:+38986 | Msa1385750:CDS |
| CTTCGTTGTTGATGTTTGGG+AGG | 0.546139 | tig0020776:-38366 | None:intergenic |
| CTCAAAGGGGATGAAAATGA+TGG | 0.547136 | tig0020776:-41400 | None:intergenic |
| GTCGTCTTCGTCATCATCAT+CGG | 0.554571 | tig0020776:-38527 | None:intergenic |
| TAGTTGTAGAACCCAAATTG+AGG | 0.555399 | tig0020776:-40787 | None:intergenic |
| CTCGAGGTGGGTGGTTGTGG+AGG | 0.556596 | tig0020776:-38395 | None:intergenic |
| TATGTTGTGTGGGAATGGCA+TGG | 0.562974 | tig0020776:+38736 | Msa1385750:CDS |
| GGAAGGGGAGTATGTTGTGT+GGG | 0.567393 | tig0020776:+38726 | Msa1385750:CDS |
| GTGTCATGACGATGAGGAAG+GGG | 0.570208 | tig0020776:+38711 | Msa1385750:CDS |
| TTCGTTGTTGATGTTTGGGA+GGG | 0.579691 | tig0020776:-38365 | None:intergenic |
| AATTGGGAGAGCATCCCTCT+CGG | 0.583194 | tig0020776:-40723 | None:intergenic |
| CGTCCTTATTCACAACCAGT+TGG | 0.586989 | tig0020776:+38844 | Msa1385750:CDS |
| TGTGAATAAGGACGCTCCGA+AGG | 0.588363 | tig0020776:-38835 | None:intergenic |
| GCGAAGAGTCGAGAGTCGAA+GGG | 0.589719 | tig0020776:+38593 | Msa1385750:CDS |
| CGAGTAAGAGATTCTCGAGG+TGG | 0.590939 | tig0020776:-38408 | None:intergenic |
| GGGTGTCATGACGATGAGGA+AGG | 0.592367 | tig0020776:+38709 | Msa1385750:CDS |
| GTTTGATGGGTTGCAAGCAG+AGG | 0.599701 | tig0020776:+41371 | Msa1385750:CDS |
| TGGGGTATAATGATGATCAT+GGG | 0.601518 | tig0020776:+38767 | Msa1385750:CDS |
| CATGAACTGCATGGCCGAGA+GGG | 0.603779 | tig0020776:+40709 | Msa1385750:CDS |
| GCTGATTGTCAGTGGAGAAG+GGG | 0.605349 | tig0020776:+38627 | Msa1385750:CDS |
| TAATTCCCATAAATATACTC+AGG | 0.608602 | tig0020776:-38796 | None:intergenic |
| ATTATCAAGCTGATTGTCAG+TGG | 0.609061 | tig0020776:+38619 | Msa1385750:CDS |
| ATAATCTTTGCTTCTCAAAG+GGG | 0.611929 | tig0020776:-41413 | None:intergenic |
| ATGTTGTGTGGGAATGGCAT+GGG | 0.613843 | tig0020776:+38737 | Msa1385750:CDS |
| GGTGTCATGACGATGAGGAA+GGG | 0.614911 | tig0020776:+38710 | Msa1385750:CDS |
| AATGGCATGGGCATATCATG+GGG | 0.631702 | tig0020776:+38749 | Msa1385750:CDS |
| AGGAAGGGGAGTATGTTGTG+TGG | 0.641212 | tig0020776:+38725 | Msa1385750:CDS |
| GCCGAAAAGGAAATCCTCGA+AGG | 0.646398 | tig0020776:-38503 | None:intergenic |
| CGAAGAGTCGAGAGTCGAAG+GGG | 0.646968 | tig0020776:+38594 | Msa1385750:CDS |
| TGAAGCTGATGTTGTCAGCA+AGG | 0.660229 | tig0020776:+38894 | Msa1385750:CDS |
| TAAGAGATTCTCGAGGTGGG+TGG | 0.661338 | tig0020776:-38404 | None:intergenic |
| GAGTAAGAGATTCTCGAGGT+GGG | 0.663187 | tig0020776:-38407 | None:intergenic |
| GAAGCTGATGTTGTCAGCAA+GGG | 0.664378 | tig0020776:+38895 | Msa1385750:CDS |
| AAATTTGTGCATGAACTGCA+TGG | 0.671265 | tig0020776:+40700 | Msa1385750:CDS |
| TGAAATGAAAGAGATATGCA+GGG | 0.672780 | tig0020776:-38313 | None:intergenic |
| CGCTCCCCGTACTTACCAGG+AGG | 0.697086 | tig0020776:+38549 | Msa1385750:CDS |
| TGTTGGGTGTCATGACGATG+AGG | 0.711770 | tig0020776:+38705 | Msa1385750:CDS |
| GCATGAACTGCATGGCCGAG+AGG | 0.734910 | tig0020776:+40708 | Msa1385750:CDS |
| TTTCGAGTAAGAGATTCTCG+AGG | 0.744371 | tig0020776:-38411 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAATTTTATTCCTT+TGG | + | tig0020776:39038-39057 | Msa1385750:intron | 10.0% |
| !!! | TTATGGTTTAAAATACAATT+TGG | + | tig0020776:39582-39601 | Msa1385750:intron | 15.0% |
| !!! | TATGGTTTAAAATACAATTT+GGG | + | tig0020776:39583-39602 | Msa1385750:intron | 15.0% |
| !!! | TTTTGGTAATTTAATGAATT+CGG | + | tig0020776:39707-39726 | Msa1385750:intron | 15.0% |
| !!! | AGTATTTTAAACCATATTTA+GGG | - | tig0020776:40383-40402 | None:intergenic | 15.0% |
| !!! | TAGTATTTTAAACCATATTT+AGG | - | tig0020776:40384-40403 | None:intergenic | 15.0% |
| !!! | AATATGGTTTAAAATACTAT+TGG | + | tig0020776:40385-40404 | Msa1385750:intron | 15.0% |
| !! | TAAGGTTGTTAAATGAATAT+CGG | - | tig0020776:39620-39639 | None:intergenic | 20.0% |
| !! | AATCACTCTAGTTATTAAAT+GGG | + | tig0020776:40159-40178 | Msa1385750:intron | 20.0% |
| !!! | TAATTTAACTTCCCTAAATA+TGG | + | tig0020776:40369-40388 | Msa1385750:intron | 20.0% |
| !!! | TTTTGGTAATTTAACGAATT+CGG | + | tig0020776:40514-40533 | Msa1385750:intron | 20.0% |
| !!! | TGAGCTTTAATTAAACAAAA+AGG | - | tig0020776:40961-40980 | None:intergenic | 20.0% |
| !! | TTGTTTAATTAAAGCTCAAA+TGG | + | tig0020776:40963-40982 | Msa1385750:intron | 20.0% |
| !! | TGTTTAATTAAAGCTCAAAT+GGG | + | tig0020776:40964-40983 | Msa1385750:intron | 20.0% |
| !!! | TAAAAGCACAAAAAGATTAT+AGG | - | tig0020776:41138-41157 | None:intergenic | 20.0% |
| !!! | ATCTTTTATGTTTTGATGTT+TGG | + | tig0020776:41284-41303 | Msa1385750:intron | 20.0% |
| !!! | ATTGAAATTTCAAGTTTGAT+GGG | + | tig0020776:41358-41377 | Msa1385750:CDS | 20.0% |
| !!! | CTTTAAAATCATACTTGTAA+AGG | + | tig0020776:41495-41514 | Msa1385750:three_prime_UTR | 20.0% |
| !!! | GAGACATGATTTTTTATTTT+TGG | + | tig0020776:41522-41541 | Msa1385750:three_prime_UTR | 20.0% |
| ! | TAATTCCCATAAATATACTC+AGG | - | tig0020776:38799-38818 | None:intergenic | 25.0% |
| !! | TTTATGGGAATTATTTTCAG+AGG | + | tig0020776:38806-38825 | Msa1385750:CDS | 25.0% |
| ! | ACAACAAAAAATCAAACCAA+AGG | - | tig0020776:39057-39076 | None:intergenic | 25.0% |
| !! | GTGAATTTTGTTAGATTGTT+TGG | + | tig0020776:39086-39105 | Msa1385750:intron | 25.0% |
| !! | AATTTTGTTAGATTGTTTGG+TGG | + | tig0020776:39089-39108 | Msa1385750:intron | 25.0% |
| !! | ATTTTGTTAGATTGTTTGGT+GGG | + | tig0020776:39090-39109 | Msa1385750:intron | 25.0% |
| !! | TGGATTTAAAGTTATTGATC+CGG | + | tig0020776:39383-39402 | Msa1385750:intron | 25.0% |
| !!! | TATTTTAACTTCTCCAAATG+TGG | + | tig0020776:39558-39577 | Msa1385750:intron | 25.0% |
| ! | TTTAAACCATAAACCACATT+TGG | - | tig0020776:39574-39593 | None:intergenic | 25.0% |
| ! | ATTCAAAACACAATCTTGAT+AGG | - | tig0020776:39792-39811 | None:intergenic | 25.0% |
| ! | AATTAGCAAATTGAAACCAT+TGG | - | tig0020776:39855-39874 | None:intergenic | 25.0% |
| ! | CTAAAATGATAGGTACAATT+GGG | + | tig0020776:40069-40088 | Msa1385750:intron | 25.0% |
| !! | TTTGTTATCTACATCAAATG+AGG | - | tig0020776:40133-40152 | None:intergenic | 25.0% |
| ! | CAATCACTCTAGTTATTAAA+TGG | + | tig0020776:40158-40177 | Msa1385750:intron | 25.0% |
| !!! | GGATGTGTTGATTTTTATTA+TGG | + | tig0020776:40270-40289 | Msa1385750:intron | 25.0% |
| ! | TCTAAAAATGTGATTCTTGT+CGG | + | tig0020776:40481-40500 | Msa1385750:intron | 25.0% |
| ! | ACATAAAAGATTCATTTCAG+TGG | - | tig0020776:41275-41294 | None:intergenic | 25.0% |
| !!! | CATTGAAATTTCAAGTTTGA+TGG | + | tig0020776:41357-41376 | Msa1385750:CDS | 25.0% |
| ! | AATAATCTTTGCTTCTCAAA+GGG | - | tig0020776:41417-41436 | None:intergenic | 25.0% |
| ! | AAATAATCTTTGCTTCTCAA+AGG | - | tig0020776:41418-41437 | None:intergenic | 25.0% |
| !! | ACAGATGCAATCTTAATTTT+GGG | - | tig0020776:41462-41481 | None:intergenic | 25.0% |
| !! | AACAGATGCAATCTTAATTT+TGG | - | tig0020776:41463-41482 | None:intergenic | 25.0% |
| ! | AGTTATTAAAAAACCATGTC+TGG | - | tig0020776:41554-41573 | None:intergenic | 25.0% |
| ! | AATAACTCATTATCTTTGCT+TGG | + | tig0020776:41567-41586 | Msa1385750:three_prime_UTR | 25.0% |
| GTGAATTGTGAAATGGAAAT+GGG | - | tig0020776:38289-38308 | None:intergenic | 30.0% | |
| TGTGAATTGTGAAATGGAAA+TGG | - | tig0020776:38290-38309 | None:intergenic | 30.0% | |
| TGAAATGAAAGAGATATGCA+GGG | - | tig0020776:38316-38335 | None:intergenic | 30.0% | |
| AATCTTCGTTGTTGATGTTT+GGG | - | tig0020776:38372-38391 | None:intergenic | 30.0% | |
| ! | AAGTTGAATCCTTTTCATCA+AGG | - | tig0020776:38437-38456 | None:intergenic | 30.0% |
| ! | TTTTCGCCTGAGTATATTTA+TGG | + | tig0020776:38790-38809 | Msa1385750:CDS | 30.0% |
| TTTCGCCTGAGTATATTTAT+GGG | + | tig0020776:38791-38810 | Msa1385750:CDS | 30.0% | |
| AAAAACCAAATTGTTGACCT+TGG | - | tig0020776:39006-39025 | None:intergenic | 30.0% | |
| TGTAGATGAATTTAGCTGTT+AGG | + | tig0020776:39201-39220 | Msa1385750:intron | 30.0% | |
| TTGAGCTATTAGATGAAGAT+TGG | + | tig0020776:39363-39382 | Msa1385750:intron | 30.0% | |
| CATTAAATTACCAAAACCCA+TGG | - | tig0020776:39703-39722 | None:intergenic | 30.0% | |
| !! | TCAAGATTGTGTTTTGAATC+TGG | + | tig0020776:39793-39812 | Msa1385750:intron | 30.0% |
| ! | GTTTAGGATGCTAAAATGAT+AGG | + | tig0020776:40059-40078 | Msa1385750:intron | 30.0% |
| GCTAAAATGATAGGTACAAT+TGG | + | tig0020776:40068-40087 | Msa1385750:intron | 30.0% | |
| AACACAATAACAACATGGTT+TGG | - | tig0020776:40310-40329 | None:intergenic | 30.0% | |
| CATTGAACACAATAACAACA+TGG | - | tig0020776:40315-40334 | None:intergenic | 30.0% | |
| ! | CATGTTGTTATTGTGTTCAA+TGG | + | tig0020776:40313-40332 | Msa1385750:intron | 30.0% |
| CGTTAAATTACCAAAATCCA+TGG | - | tig0020776:40510-40529 | None:intergenic | 30.0% | |
| AATCTTGATATGTGAGACAT+AGG | - | tig0020776:40587-40606 | None:intergenic | 30.0% | |
| !! | TCAAGATTGTGTTTTGAATC+TGG | + | tig0020776:39793-39812 | Msa1385750:intron | 30.0% |
| ATTGACCATAACCTCAATTT+GGG | + | tig0020776:40776-40795 | Msa1385750:CDS | 30.0% | |
| TAATTTCCGATGATGTAACA+GGG | - | tig0020776:40906-40925 | None:intergenic | 30.0% | |
| ATAATTTCCGATGATGTAAC+AGG | - | tig0020776:40907-40926 | None:intergenic | 30.0% | |
| ATAATCTTTGCTTCTCAAAG+GGG | - | tig0020776:41416-41435 | None:intergenic | 30.0% | |
| !! | GGGTTTTGTGAATTGTGAAA+TGG | - | tig0020776:38296-38315 | None:intergenic | 35.0% |
| GTGAAATGAAAGAGATATGC+AGG | - | tig0020776:38317-38336 | None:intergenic | 35.0% | |
| GAATCTTCGTTGTTGATGTT+TGG | - | tig0020776:38373-38392 | None:intergenic | 35.0% | |
| TACTCGAAACCTTGATGAAA+AGG | + | tig0020776:38425-38444 | Msa1385750:CDS | 35.0% | |
| ! | GAAATCCTCGAAGGATTTTT+GGG | - | tig0020776:38497-38516 | None:intergenic | 35.0% |
| ATTATCAAGCTGATTGTCAG+TGG | + | tig0020776:38619-38638 | Msa1385750:CDS | 35.0% | |
| ATGGGGTATAATGATGATCA+TGG | + | tig0020776:38766-38785 | Msa1385750:CDS | 35.0% | |
| TGGGGTATAATGATGATCAT+GGG | + | tig0020776:38767-38786 | Msa1385750:CDS | 35.0% | |
| GAATTTAGCTGTTAGGAAGT+TGG | + | tig0020776:39208-39227 | Msa1385750:intron | 35.0% | |
| ! | GAAGTTGGATTTTCTGTTCT+GGG | + | tig0020776:39223-39242 | Msa1385750:intron | 35.0% |
| ! | GTTCTGGGTTTAAGATGTTT+AGG | + | tig0020776:39238-39257 | Msa1385750:intron | 35.0% |
| ! | GTTTAAGATGTTTAGGTGGT+AGG | + | tig0020776:39245-39264 | Msa1385750:intron | 35.0% |
| GTAGATAATAAATGACGACG+CGG | + | tig0020776:39322-39341 | Msa1385750:intron | 35.0% | |
| CCATGAAGTCTCTATCAAAT+TGG | - | tig0020776:39425-39444 | None:intergenic | 35.0% | |
| CCAATTTGATAGAGACTTCA+TGG | + | tig0020776:39422-39441 | Msa1385750:intron | 35.0% | |
| TTGATAGAGACTTCATGGAA+CGG | + | tig0020776:39427-39446 | Msa1385750:intron | 35.0% | |
| CATTGAACACAACAACAACA+GGG | - | tig0020776:39500-39519 | None:intergenic | 35.0% | |
| !! | GTTCAATGGATTGATGTTGT+TGG | + | tig0020776:39512-39531 | Msa1385750:intron | 35.0% |
| ACTTCTCCAAATGTGGTTTA+TGG | + | tig0020776:39565-39584 | Msa1385750:intron | 35.0% | |
| AGTCACAACTTAAGTAGTTG+CGG | - | tig0020776:39646-39665 | None:intergenic | 35.0% | |
| TTGAATCTGGTTGCTGATAT+TGG | + | tig0020776:39806-39825 | Msa1385750:intron | 35.0% | |
| GTCAATATGTCTTCATCCAA+TGG | + | tig0020776:39836-39855 | Msa1385750:intron | 35.0% | |
| !!! | AGAACCAAATTTTGAGGTCA+TGG | - | tig0020776:39986-40005 | None:intergenic | 35.0% |
| ! | GTTGCTAGAACCAAATTTTG+AGG | - | tig0020776:39992-40011 | None:intergenic | 35.0% |
| GGATGAAGTTTGGATCAAAT+TGG | - | tig0020776:40241-40260 | None:intergenic | 35.0% | |
| CTGATCTTCATCTAATGACA+TGG | - | tig0020776:40341-40360 | None:intergenic | 35.0% | |
| TAGGGAAGTTAAATTACGAG+TGG | - | tig0020776:40365-40384 | None:intergenic | 35.0% | |
| CTAGGTTATTGGATGAAGAT+CGG | - | tig0020776:40423-40442 | None:intergenic | 35.0% | |
| AAATTTGTGCATGAACTGCA+TGG | + | tig0020776:40700-40719 | Msa1385750:CDS | 35.0% | |
| GATTGACCATAACCTCAATT+TGG | + | tig0020776:40775-40794 | Msa1385750:CDS | 35.0% | |
| TAGAACCCAAATTGAGGTTA+TGG | - | tig0020776:40784-40803 | None:intergenic | 35.0% | |
| TAGTTGTAGAACCCAAATTG+AGG | - | tig0020776:40790-40809 | None:intergenic | 35.0% | |
| AGTTTATTTGTGTGTGTGTG+TGG | + | tig0020776:40810-40829 | Msa1385750:intron | 35.0% | |
| GTTTATTTGTGTGTGTGTGT+GGG | + | tig0020776:40811-40830 | Msa1385750:intron | 35.0% | |
| CGGAAATTATGTACTTGTGT+TGG | + | tig0020776:40917-40936 | Msa1385750:intron | 35.0% | |
| GTTGGTTGCTATGGTTAATT+TGG | + | tig0020776:40935-40954 | Msa1385750:intron | 35.0% | |
| ATTTCTTACATGTGTAGCTC+TGG | - | tig0020776:41010-41029 | None:intergenic | 35.0% | |
| AGCTACACATGTAAGAAATG+TGG | + | tig0020776:41011-41030 | Msa1385750:intron | 35.0% | |
| TAAATGATCTGTTAGCAGTG+CGG | - | tig0020776:41078-41097 | None:intergenic | 35.0% | |
| !!! | GAAATGTTTTGTTTTCCCTG+TGG | + | tig0020776:41180-41199 | Msa1385750:intron | 35.0% |
| ! | TTCTTAGCATTTTTGTCACC+TGG | + | tig0020776:41225-41244 | Msa1385750:intron | 35.0% |
| TGCACTTAATGCAATAAACC+AGG | - | tig0020776:41246-41265 | None:intergenic | 35.0% | |
| ACTTCTATGCTGAAATTGAC+AGG | + | tig0020776:41319-41338 | Msa1385750:intron | 35.0% | |
| ! | TTTTTGGATACAACCAGACA+TGG | + | tig0020776:41538-41557 | Msa1385750:three_prime_UTR | 35.0% |
| TTCGTTGTTGATGTTTGGGA+GGG | - | tig0020776:38368-38387 | None:intergenic | 40.0% | |
| ! | TTTCGAGTAAGAGATTCTCG+AGG | - | tig0020776:38414-38433 | None:intergenic | 40.0% |
| ! | GGAAATCCTCGAAGGATTTT+TGG | - | tig0020776:38498-38517 | None:intergenic | 40.0% |
| ! | TCCTTCGAGGATTTCCTTTT+CGG | + | tig0020776:38502-38521 | Msa1385750:CDS | 40.0% |
| GGGAGAGTAGTATTTGTGTT+GGG | + | tig0020776:38689-38708 | Msa1385750:CDS | 40.0% | |
| ACTCCAACTGGTTGTGAATA+AGG | - | tig0020776:38850-38869 | None:intergenic | 40.0% | |
| TATTCACAACCAGTTGGAGT+TGG | + | tig0020776:38850-38869 | Msa1385750:CDS | 40.0% | |
| AACCAAATTGTTGACCTTGG+AGG | - | tig0020776:39003-39022 | None:intergenic | 40.0% | |
| ! | GGAAGTTGGATTTTCTGTTC+TGG | + | tig0020776:39222-39241 | Msa1385750:intron | 40.0% |
| ! | CTGGGTTTAAGATGTTTAGG+TGG | + | tig0020776:39241-39260 | Msa1385750:intron | 40.0% |
| TTTAGGTGGTAGGCACAAAT+AGG | + | tig0020776:39255-39274 | Msa1385750:intron | 40.0% | |
| TTAGGTGGTAGGCACAAATA+GGG | + | tig0020776:39256-39275 | Msa1385750:intron | 40.0% | |
| TACATCAAATGAGCTTCCCT+AGG | - | tig0020776:39305-39324 | None:intergenic | 40.0% | |
| CTCTATCAAATTGGAGCCAT+TGG | - | tig0020776:39416-39435 | None:intergenic | 40.0% | |
| AACACAACAACAACAGGGTT+TGG | - | tig0020776:39495-39514 | None:intergenic | 40.0% | |
| CCATTGAACACAACAACAAC+AGG | - | tig0020776:39501-39520 | None:intergenic | 40.0% | |
| ! | CCTGTTGTTGTTGTGTTCAA+TGG | + | tig0020776:39498-39517 | Msa1385750:intron | 40.0% |
| CTTAAGTAGTTGCGGATCTA+AGG | - | tig0020776:39638-39657 | None:intergenic | 40.0% | |
| TCCAAAGTCGTGATTCTTGT+CGG | + | tig0020776:39674-39693 | Msa1385750:intron | 40.0% | |
| TGATTCTTGTCGGAAACCAT+GGG | + | tig0020776:39684-39703 | Msa1385750:intron | 40.0% | |
| TTGATCATAGTCGCTTCAGT+TGG | + | tig0020776:39747-39766 | Msa1385750:intron | 40.0% | |
| TTGGCCATGACCTCAAAATT+TGG | + | tig0020776:39979-39998 | Msa1385750:intron | 40.0% | |
| TGTGGATGAATTTGGCTGTT+AGG | + | tig0020776:40022-40041 | Msa1385750:intron | 40.0% | |
| GAATTTGGCTGTTAGGAAGT+TGG | + | tig0020776:40029-40048 | Msa1385750:intron | 40.0% | |
| GGAAGTTGGATCACATGTTT+AGG | + | tig0020776:40043-40062 | Msa1385750:intron | 40.0% | |
| GGGAGCTATTTGATGAAGAT+TGG | + | tig0020776:40179-40198 | Msa1385750:intron | 40.0% | |
| TTGGATCAAATTGGAACCAC+TGG | - | tig0020776:40232-40251 | None:intergenic | 40.0% | |
| TTGATCCAAACTTCATCCGA+CGG | + | tig0020776:40243-40262 | Msa1385750:intron | 40.0% | |
| CACAGCTACTGAAATTGTGA+CGG | + | tig0020776:40451-40470 | Msa1385750:intron | 40.0% | |
| ! | TTGTCGGAAACCATGGATTT+TGG | + | tig0020776:40497-40516 | Msa1385750:intron | 40.0% |
| ATTGAGGTTATGGTCAATCC+TGG | - | tig0020776:40774-40793 | None:intergenic | 40.0% | |
| ! | TTTTGAGCTTATGTGTTGCG+TGG | + | tig0020776:40870-40889 | Msa1385750:intron | 40.0% |
| !! | TGTACTTGTGTTGGTTGCTA+TGG | + | tig0020776:40926-40945 | Msa1385750:intron | 40.0% |
| !!! | ATGTTTTGTTTTCCCTGTGG+TGG | + | tig0020776:41183-41202 | Msa1385750:intron | 40.0% |
| CTCAAAGGGGATGAAAATGA+TGG | - | tig0020776:41403-41422 | None:intergenic | 40.0% | |
| GGGATTTGCACTGTGAAAAT+GGG | - | tig0020776:41442-41461 | None:intergenic | 40.0% | |
| TGGGATTTGCACTGTGAAAA+TGG | - | tig0020776:41443-41462 | None:intergenic | 40.0% | |
| CTTCGTTGTTGATGTTTGGG+AGG | - | tig0020776:38369-38388 | None:intergenic | 45.0% | |
| GAGTAAGAGATTCTCGAGGT+GGG | - | tig0020776:38410-38429 | None:intergenic | 45.0% | |
| !! | CCTCGAAGGATTTTTGGGAA+GGG | - | tig0020776:38492-38511 | None:intergenic | 45.0% |
| !! | TCCTCGAAGGATTTTTGGGA+AGG | - | tig0020776:38493-38512 | None:intergenic | 45.0% |
| GTCGTCTTCGTCATCATCAT+CGG | - | tig0020776:38530-38549 | None:intergenic | 45.0% | |
| AAGCTGATTGTCAGTGGAGA+AGG | + | tig0020776:38625-38644 | Msa1385750:CDS | 45.0% | |
| AGCTGATTGTCAGTGGAGAA+GGG | + | tig0020776:38626-38645 | Msa1385750:CDS | 45.0% | |
| GTAACTGCTTCACCGGAATT+CGG | - | tig0020776:38664-38683 | None:intergenic | 45.0% | |
| CGGGAGAGTAGTATTTGTGT+TGG | + | tig0020776:38688-38707 | Msa1385750:CDS | 45.0% | |
| TATGTTGTGTGGGAATGGCA+TGG | + | tig0020776:38736-38755 | Msa1385750:CDS | 45.0% | |
| ATGTTGTGTGGGAATGGCAT+GGG | + | tig0020776:38737-38756 | Msa1385750:CDS | 45.0% | |
| GAATGGCATGGGCATATCAT+GGG | + | tig0020776:38748-38767 | Msa1385750:CDS | 45.0% | |
| AATGGCATGGGCATATCATG+GGG | + | tig0020776:38749-38768 | Msa1385750:CDS | 45.0% | |
| ! | TTTTCAGAGGACTGTGCCTT+CGG | + | tig0020776:38819-38838 | Msa1385750:CDS | 45.0% |
| CGTCCTTATTCACAACCAGT+TGG | + | tig0020776:38844-38863 | Msa1385750:CDS | 45.0% | |
| TCTTCATCTCCAACTCCAAC+TGG | - | tig0020776:38862-38881 | None:intergenic | 45.0% | |
| TGAAGCTGATGTTGTCAGCA+AGG | + | tig0020776:38894-38913 | Msa1385750:CDS | 45.0% | |
| GAAGCTGATGTTGTCAGCAA+GGG | + | tig0020776:38895-38914 | Msa1385750:CDS | 45.0% | |
| TGTTGTCAGCAAGGGTTTGA+AGG | + | tig0020776:38903-38922 | Msa1385750:CDS | 45.0% | |
| CTCCTCCAAGGTCAACAATT+TGG | + | tig0020776:38998-39017 | Msa1385750:intron | 45.0% | |
| GGTAGGCACAAATAGGGTTT+CGG | + | tig0020776:39262-39281 | Msa1385750:intron | 45.0% | |
| TTGATCCGGTCTTCATCCAA+TGG | + | tig0020776:39397-39416 | Msa1385750:intron | 45.0% | |
| TCCGACAAGAATCACGACTT+TGG | - | tig0020776:39678-39697 | None:intergenic | 45.0% | |
| GTGATTCTTGTCGGAAACCA+TGG | + | tig0020776:39683-39702 | Msa1385750:intron | 45.0% | |
| ! | TTGTCGGAAACCATGGGTTT+TGG | + | tig0020776:39690-39709 | Msa1385750:intron | 45.0% |
| CCTGAACTGCATAACTGAGA+GGG | + | tig0020776:39910-39929 | Msa1385750:intron | 45.0% | |
| TCCTTCGCTGTGGATGAATT+TGG | + | tig0020776:40014-40033 | Msa1385750:intron | 45.0% | |
| CCGAGATAACAACCTGGTTT+GGG | - | tig0020776:40106-40125 | None:intergenic | 45.0% | |
| CCCAAACCAGGTTGTTATCT+CGG | + | tig0020776:40103-40122 | Msa1385750:intron | 45.0% | |
| CCAAACCAGGTTGTTATCTC+GGG | + | tig0020776:40104-40123 | Msa1385750:intron | 45.0% | |
| CAAACCAGGTTGTTATCTCG+GGG | + | tig0020776:40105-40124 | Msa1385750:intron | 45.0% | |
| ATCAACACATCCACTACCGT+CGG | - | tig0020776:40262-40281 | None:intergenic | 45.0% | |
| GTGTCGTGGATCTAGGTTAT+TGG | - | tig0020776:40434-40453 | None:intergenic | 45.0% | |
| CAATTTCAGTAGCTGTGTCG+TGG | - | tig0020776:40448-40467 | None:intergenic | 45.0% | |
| GTGATTCTTGTCGGAAACCA+TGG | + | tig0020776:39683-39702 | Msa1385750:intron | 45.0% | |
| CCAACTGAAGTGACTGTGAT+TGG | - | tig0020776:40556-40575 | None:intergenic | 45.0% | |
| CCAATCACAGTCACTTCAGT+TGG | + | tig0020776:40553-40572 | Msa1385750:intron | 45.0% | |
| TATTTGTGTGTGTGTGTGGG+TGG | + | tig0020776:40814-40833 | Msa1385750:intron | 45.0% | |
| ATTTGTGTGTGTGTGTGGGT+GGG | + | tig0020776:40815-40834 | Msa1385750:intron | 45.0% | |
| CCAACACCCTGTTACATCAT+CGG | + | tig0020776:40897-40916 | Msa1385750:intron | 45.0% | |
| AAAGCTCAAATGGGCGATGA+AGG | + | tig0020776:40973-40992 | Msa1385750:intron | 45.0% | |
| TAAGTTGTCTTGCCACCACA+GGG | - | tig0020776:41198-41217 | None:intergenic | 45.0% | |
| GATGTTTGGGAGGGAAGTCA+TGG | - | tig0020776:38359-38378 | None:intergenic | 50.0% | |
| TAAGAGATTCTCGAGGTGGG+TGG | - | tig0020776:38407-38426 | None:intergenic | 50.0% | |
| CGAGTAAGAGATTCTCGAGG+TGG | - | tig0020776:38411-38430 | None:intergenic | 50.0% | |
| CTGTCGTCATTGACGTTGTC+TGG | - | tig0020776:38466-38485 | None:intergenic | 50.0% | |
| CCCTTCCCAAAAATCCTTCG+AGG | + | tig0020776:38489-38508 | Msa1385750:CDS | 50.0% | |
| GCCGAAAAGGAAATCCTCGA+AGG | - | tig0020776:38506-38525 | None:intergenic | 50.0% | |
| CATCATCATCGGAGCCGAAA+AGG | - | tig0020776:38519-38538 | None:intergenic | 50.0% | |
| GCTGATTGTCAGTGGAGAAG+GGG | + | tig0020776:38627-38646 | Msa1385750:CDS | 50.0% | |
| GATACGCTGAAGCCGAATTC+CGG | + | tig0020776:38649-38668 | Msa1385750:CDS | 50.0% | |
| CCGAATCGTAACTGCTTCAC+CGG | - | tig0020776:38671-38690 | None:intergenic | 50.0% | |
| CCGGTGAAGCAGTTACGATT+CGG | + | tig0020776:38668-38687 | Msa1385750:CDS | 50.0% | |
| CGGTGAAGCAGTTACGATTC+GGG | + | tig0020776:38669-38688 | Msa1385750:CDS | 50.0% | |
| ! | TGTTGGGTGTCATGACGATG+AGG | + | tig0020776:38705-38724 | Msa1385750:CDS | 50.0% |
| ! | GGTGTCATGACGATGAGGAA+GGG | + | tig0020776:38710-38729 | Msa1385750:CDS | 50.0% |
| GTGTCATGACGATGAGGAAG+GGG | + | tig0020776:38711-38730 | Msa1385750:CDS | 50.0% | |
| ! | AGGAAGGGGAGTATGTTGTG+TGG | + | tig0020776:38725-38744 | Msa1385750:CDS | 50.0% |
| ! | GGAAGGGGAGTATGTTGTGT+GGG | + | tig0020776:38726-38745 | Msa1385750:CDS | 50.0% |
| ! | GGGAGTATGTTGTGTGGGAA+TGG | + | tig0020776:38731-38750 | Msa1385750:CDS | 50.0% |
| GGAATGGCATGGGCATATCA+TGG | + | tig0020776:38747-38766 | Msa1385750:CDS | 50.0% | |
| TGTGAATAAGGACGCTCCGA+AGG | - | tig0020776:38838-38857 | None:intergenic | 50.0% | |
| ATACTGATGCTGCTCCTGCT+AGG | + | tig0020776:38944-38963 | Msa1385750:CDS | 50.0% | |
| CTGCGATGAAGAATCCTAGC+AGG | - | tig0020776:38961-38980 | None:intergenic | 50.0% | |
| CTTCATCGCAGTCTCAATGC+TGG | + | tig0020776:38970-38989 | Msa1385750:CDS | 50.0% | |
| AATAGGGTTTCGGAACACCC+TGG | + | tig0020776:39272-39291 | Msa1385750:intron | 50.0% | |
| AACACCCTGGTTGTGATCCT+AGG | + | tig0020776:39285-39304 | Msa1385750:intron | 50.0% | |
| ACACCCTGGTTGTGATCCTA+GGG | + | tig0020776:39286-39305 | Msa1385750:intron | 50.0% | |
| CTTCCCTAGGATCACAACCA+GGG | - | tig0020776:39292-39311 | None:intergenic | 50.0% | |
| TGGAGCCATTGGATGAAGAC+CGG | - | tig0020776:39405-39424 | None:intergenic | 50.0% | |
| GCCTGAACTGCATAACTGAG+AGG | + | tig0020776:39909-39928 | Msa1385750:intron | 50.0% | |
| CCCTCTCAGTTATGCAGTTC+AGG | - | tig0020776:39913-39932 | None:intergenic | 50.0% | |
| CTAGCAACTTTCCTTCGCTG+TGG | + | tig0020776:40004-40023 | Msa1385750:intron | 50.0% | |
| GCCAAATTCATCCACAGCGA+AGG | - | tig0020776:40018-40037 | None:intergenic | 50.0% | |
| !! | AACAACCTGGTTTGGGCGTT+CGG | - | tig0020776:40099-40118 | None:intergenic | 50.0% |
| CCCGAGATAACAACCTGGTT+TGG | - | tig0020776:40107-40126 | None:intergenic | 50.0% | |
| TTGATCCGATCGTCATCCAG+TGG | + | tig0020776:40213-40232 | Msa1385750:intron | 50.0% | |
| TGGAACCACTGGATGACGAT+CGG | - | tig0020776:40221-40240 | None:intergenic | 50.0% | |
| CACTACCGTCGGATGAAGTT+TGG | - | tig0020776:40251-40270 | None:intergenic | 50.0% | |
| CAAACTTCATCCGACGGTAG+TGG | + | tig0020776:40249-40268 | Msa1385750:intron | 50.0% | |
| AGTAGCTGTGTCGTGGATCT+AGG | - | tig0020776:40441-40460 | None:intergenic | 50.0% | |
| !! | AATTGGGAGAGCATCCCTCT+CGG | - | tig0020776:40726-40745 | None:intergenic | 50.0% |
| GGCTGACGTTGAAGGCAATT+GGG | - | tig0020776:40742-40761 | None:intergenic | 50.0% | |
| TGGCTGACGTTGAAGGCAAT+TGG | - | tig0020776:40743-40762 | None:intergenic | 50.0% | |
| AGACAACTGGCTGACGTTGA+AGG | - | tig0020776:40750-40769 | None:intergenic | 50.0% | |
| GGTCAATCCTGGTAGACAAC+TGG | - | tig0020776:40763-40782 | None:intergenic | 50.0% | |
| CCGATGATGTAACAGGGTGT+TGG | - | tig0020776:40900-40919 | None:intergenic | 50.0% | |
| CTAAGTTGTCTTGCCACCAC+AGG | - | tig0020776:41199-41218 | None:intergenic | 50.0% | |
| !! | GTTTGATGGGTTGCAAGCAG+AGG | + | tig0020776:41371-41390 | Msa1385750:CDS | 50.0% |
| ATTCTCGAGGTGGGTGGTTG+TGG | - | tig0020776:38401-38420 | None:intergenic | 55.0% | |
| GCGAAGAGTCGAGAGTCGAA+GGG | + | tig0020776:38593-38612 | Msa1385750:CDS | 55.0% | |
| CGAAGAGTCGAGAGTCGAAG+GGG | + | tig0020776:38594-38613 | Msa1385750:CDS | 55.0% | |
| ! | GGGTGTCATGACGATGAGGA+AGG | + | tig0020776:38709-38728 | Msa1385750:CDS | 55.0% |
| !! | ATGCTGGTTCTGCTCCTCCA+AGG | + | tig0020776:38986-39005 | Msa1385750:CDS | 55.0% |
| GCTTCCCTAGGATCACAACC+AGG | - | tig0020776:39293-39312 | None:intergenic | 55.0% | |
| ! | TTTGAGGTCATGGCCAACCC+CGG | - | tig0020776:39976-39995 | None:intergenic | 55.0% |
| !! | ACAACCTGGTTTGGGCGTTC+GGG | - | tig0020776:40098-40117 | None:intergenic | 55.0% |
| GGTTCCCCGAGATAACAACC+TGG | - | tig0020776:40112-40131 | None:intergenic | 55.0% | |
| CATGAACTGCATGGCCGAGA+GGG | + | tig0020776:40709-40728 | Msa1385750:CDS | 55.0% | |
| ACGTCAGCCAGTTGTCTACC+AGG | + | tig0020776:40753-40772 | Msa1385750:CDS | 55.0% | |
| CCGACCTCCTGGTAAGTACG+GGG | - | tig0020776:38556-38575 | None:intergenic | 60.0% | |
| CCCCGTACTTACCAGGAGGT+CGG | + | tig0020776:38553-38572 | Msa1385750:CDS | 60.0% | |
| CCCGACCTCCTGGTAAGTAC+GGG | - | tig0020776:38557-38576 | None:intergenic | 60.0% | |
| CCCGTACTTACCAGGAGGTC+GGG | + | tig0020776:38554-38573 | Msa1385750:CDS | 60.0% | |
| GCCCGACCTCCTGGTAAGTA+CGG | - | tig0020776:38558-38577 | None:intergenic | 60.0% | |
| TTGCTTTCTGCCCGACCTCC+TGG | - | tig0020776:38567-38586 | None:intergenic | 60.0% | |
| CGCGAAGAGTCGAGAGTCGA+AGG | + | tig0020776:38592-38611 | Msa1385750:CDS | 60.0% | |
| GGCTCGCGTGGAAGGTCATT+GGG | - | tig0020776:39943-39962 | None:intergenic | 60.0% | |
| TGGCTCGCGTGGAAGGTCAT+TGG | - | tig0020776:39944-39963 | None:intergenic | 60.0% | |
| AATGACCTTCCACGCGAGCC+AGG | + | tig0020776:39943-39962 | Msa1385750:intron | 60.0% | |
| ! | ACGCGAGCCAGGTTAGCTAC+CGG | + | tig0020776:39954-39973 | Msa1385750:intron | 60.0% |
| GATTCCCGAACGCCCAAACC+AGG | + | tig0020776:40091-40110 | Msa1385750:intron | 60.0% | |
| GCATGAACTGCATGGCCGAG+AGG | + | tig0020776:40708-40727 | Msa1385750:CDS | 60.0% | |
| TGTGTGTGTGTGTGGGTGGG+CGG | + | tig0020776:40818-40837 | Msa1385750:intron | 60.0% | |
| CTCGAGGTGGGTGGTTGTGG+AGG | - | tig0020776:38398-38417 | None:intergenic | 65.0% | |
| CGACGCTCCCCGTACTTACC+AGG | + | tig0020776:38546-38565 | Msa1385750:CDS | 65.0% | |
| CGCTCCCCGTACTTACCAGG+AGG | + | tig0020776:38549-38568 | Msa1385750:CDS | 65.0% | |
| ! | GCTAACCTGGCTCGCGTGGA+AGG | - | tig0020776:39951-39970 | None:intergenic | 65.0% |
| ! | GGTAGCTAACCTGGCTCGCG+TGG | - | tig0020776:39955-39974 | None:intergenic | 65.0% |
| ! | CGCGAGCCAGGTTAGCTACC+GGG | + | tig0020776:39955-39974 | Msa1385750:intron | 65.0% |
| ! | GCGAGCCAGGTTAGCTACCG+GGG | + | tig0020776:39956-39975 | Msa1385750:intron | 65.0% |
| ! | GCCAGGTTAGCTACCGGGGT+TGG | + | tig0020776:39960-39979 | Msa1385750:intron | 65.0% |
| GCCAACCCCGGTAGCTAACC+TGG | - | tig0020776:39964-39983 | None:intergenic | 65.0% | |
| GTGTGTGTGTGTGGGTGGGC+GGG | + | tig0020776:40819-40838 | Msa1385750:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020776 | gene | 38286 | 41619 | 38286 | ID=Msa1385750;Name=Msa1385750 |
| tig0020776 | mRNA | 38286 | 41619 | 38286 | ID=Msa1385750-mRNA-1;Parent=Msa1385750;Name=Msa1385750-mRNA-1;_AED=0.07;_eAED=0.07;_QI=72|0|0.66|0.66|1|1|3|220|291 |
| tig0020776 | exon | 38286 | 39007 | 38286 | ID=Msa1385750-mRNA-1:exon:9710;Parent=Msa1385750-mRNA-1 |
| tig0020776 | exon | 40658 | 40824 | 40658 | ID=Msa1385750-mRNA-1:exon:9711;Parent=Msa1385750-mRNA-1 |
| tig0020776 | exon | 41341 | 41619 | 41341 | ID=Msa1385750-mRNA-1:exon:9712;Parent=Msa1385750-mRNA-1 |
| tig0020776 | five_prime_UTR | 38286 | 38357 | 38286 | ID=Msa1385750-mRNA-1:five_prime_utr;Parent=Msa1385750-mRNA-1 |
| tig0020776 | CDS | 38358 | 39007 | 38358 | ID=Msa1385750-mRNA-1:cds;Parent=Msa1385750-mRNA-1 |
| tig0020776 | CDS | 40658 | 40824 | 40658 | ID=Msa1385750-mRNA-1:cds;Parent=Msa1385750-mRNA-1 |
| tig0020776 | CDS | 41341 | 41399 | 41341 | ID=Msa1385750-mRNA-1:cds;Parent=Msa1385750-mRNA-1 |
| tig0020776 | three_prime_UTR | 41400 | 41619 | 41400 | ID=Msa1385750-mRNA-1:three_prime_utr;Parent=Msa1385750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
