Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169940 | XP_003625511.1 | 86.996 | 223 | 21 | 4 | 1 | 218 | 1 | 220 | 2.82e-116 | 343 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169940 | G7L0L4 | 86.996 | 223 | 21 | 4 | 1 | 218 | 1 | 220 | 1.35e-116 | 343 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0648620 | Msa1169940 | 0.824807 | 6.606553e-54 | -8.615850e-47 |
| Msa0648670 | Msa1169940 | 0.832911 | 7.215683e-56 | -8.615850e-47 |
| Msa1116940 | Msa1169940 | 0.801508 | 8.710593e-49 | -8.615850e-47 |
| Msa1123800 | Msa1169940 | 0.912311 | 2.251792e-83 | -8.615850e-47 |
| Msa1169940 | Msa1356150 | 0.872081 | 4.183078e-67 | -8.615850e-47 |
| Msa1169940 | Msa1385750 | 0.997714 | 9.968315e-248 | -8.615850e-47 |
| Msa1169940 | Msa1409220 | 0.998767 | 7.453023e-276 | -8.615850e-47 |
| Msa1169940 | Msa1434120 | 0.991893 | 3.960856e-190 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169940 | MtrunA17_Chr7g0263051 | 86.996 | 223 | 21 | 4 | 1 | 218 | 1 | 220 | 2.59e-120 | 343 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169940 | AT3G53630.2 | 42.857 | 245 | 115 | 8 | 12 | 253 | 3 | 225 | 3.00e-48 | 160 |
| Msa1169940 | AT3G53630.1 | 46.569 | 204 | 94 | 6 | 12 | 214 | 3 | 192 | 3.36e-47 | 157 |
Find 96 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGATGCAATCTTAATTT+TGG | 0.074580 | 7_4:-63044749 | None:intergenic |
| GATTGACCATAACCTCAATT+TGG | 0.202384 | 7_4:+63044064 | Msa1169940:CDS |
| TGGGATTTGCACTGTGAAAA+TGG | 0.222632 | 7_4:-63044729 | None:intergenic |
| ACTCCAACTGGTTGTGAATA+AGG | 0.268058 | 7_4:-63042136 | None:intergenic |
| GAATCTTCGTTGTTGATGTT+TGG | 0.305644 | 7_4:-63041659 | None:intergenic |
| AACAATGGACCAGTATAAAA+AGG | 0.309171 | 7_4:-63044895 | None:intergenic |
| CATTGAAATTTCAAGTTTGA+TGG | 0.324699 | 7_4:+63044646 | Msa1169940:CDS |
| AATCTTCGTTGTTGATGTTT+GGG | 0.328350 | 7_4:-63041658 | None:intergenic |
| GTAACTGCTTCACCGGAATT+CGG | 0.343202 | 7_4:-63041950 | None:intergenic |
| CTGTCGTCATTGACGTTGTC+TGG | 0.355101 | 7_4:-63041752 | None:intergenic |
| TAGAACCCAAATTGAGGTTA+TGG | 0.365006 | 7_4:-63044070 | None:intergenic |
| TGTGAATTGTGAAATGGAAA+TGG | 0.366177 | 7_4:-63041576 | None:intergenic |
| TGGCTGACGTTGAAGGCAAT+TGG | 0.369030 | 7_4:-63044029 | None:intergenic |
| CGGTGAAGCAGTTACGATTC+GGG | 0.372928 | 7_4:+63041958 | Msa1169940:CDS |
| ATTGACCATAACCTCAATTT+GGG | 0.373255 | 7_4:+63044065 | Msa1169940:CDS |
| ATTCTCGAGGTGGGTGGTTG+TGG | 0.374448 | 7_4:-63041687 | None:intergenic |
| GATACGCTGAAGCCGAATTC+CGG | 0.405492 | 7_4:+63041938 | Msa1169940:CDS |
| AATAACTCATTATCTTTGCT+TGG | 0.411400 | 7_4:+63044856 | Msa1169940:three_prime_UTR |
| CCGGTGAAGCAGTTACGATT+CGG | 0.415694 | 7_4:+63041957 | Msa1169940:CDS |
| TACTCGAAACCTTGATGAAA+AGG | 0.423065 | 7_4:+63041714 | Msa1169940:CDS |
| GTGAATTGTGAAATGGAAAT+GGG | 0.424607 | 7_4:-63041575 | None:intergenic |
| AATAATCTTTGCTTCTCAAA+GGG | 0.425067 | 7_4:-63044703 | None:intergenic |
| TCTTCATCTCCAACTCCAAC+TGG | 0.432362 | 7_4:-63042148 | None:intergenic |
| TTTCGCCTGAGTATATTTAT+GGG | 0.433268 | 7_4:+63042080 | Msa1169940:CDS |
| GGAATGGCATGGGCATATCA+TGG | 0.438655 | 7_4:+63042036 | Msa1169940:CDS |
| GGCTGACGTTGAAGGCAATT+GGG | 0.439791 | 7_4:-63044028 | None:intergenic |
| CTTTAAAATCATACTTGTAA+AGG | 0.444260 | 7_4:+63044784 | Msa1169940:three_prime_UTR |
| TTGCTTTCTGCCCGACCTCC+TGG | 0.447681 | 7_4:-63041853 | None:intergenic |
| GTGAAATGAAAGAGATATGC+AGG | 0.447964 | 7_4:-63041603 | None:intergenic |
| GCCCGACCTCCTGGTAAGTA+CGG | 0.449996 | 7_4:-63041844 | None:intergenic |
| AAGCTGATTGTCAGTGGAGA+AGG | 0.455681 | 7_4:+63041914 | Msa1169940:CDS |
| CATCATCATCGGAGCCGAAA+AGG | 0.460905 | 7_4:-63041805 | None:intergenic |
| CCCGTACTTACCAGGAGGTC+GGG | 0.461045 | 7_4:+63041843 | Msa1169940:CDS |
| GGGAGTATGTTGTGTGGGAA+TGG | 0.467402 | 7_4:+63042020 | Msa1169940:CDS |
| TGTTGTCAGCAAGGGTTTGA+AGG | 0.470639 | 7_4:+63042192 | Msa1169940:CDS |
| CGGGAGAGTAGTATTTGTGT+TGG | 0.470805 | 7_4:+63041977 | Msa1169940:CDS |
| GAATGGCATGGGCATATCAT+GGG | 0.474822 | 7_4:+63042037 | Msa1169940:CDS |
| CGCGAAGAGTCGAGAGTCGA+AGG | 0.475861 | 7_4:+63041881 | Msa1169940:CDS |
| GGGAGAGTAGTATTTGTGTT+GGG | 0.478013 | 7_4:+63041978 | Msa1169940:CDS |
| GGGATTTGCACTGTGAAAAT+GGG | 0.479435 | 7_4:-63044728 | None:intergenic |
| ATGGGGTATAATGATGATCA+TGG | 0.480640 | 7_4:+63042055 | Msa1169940:CDS |
| GGTCAATCCTGGTAGACAAC+TGG | 0.486687 | 7_4:-63044049 | None:intergenic |
| AAATAATCTTTGCTTCTCAA+AGG | 0.489359 | 7_4:-63044704 | None:intergenic |
| AGACAACTGGCTGACGTTGA+AGG | 0.491469 | 7_4:-63044036 | None:intergenic |
| ACGTCAGCCAGTTGTCTACC+AGG | 0.493612 | 7_4:+63044042 | Msa1169940:CDS |
| ATTGAAATTTCAAGTTTGAT+GGG | 0.493745 | 7_4:+63044647 | Msa1169940:CDS |
| TATTCACAACCAGTTGGAGT+TGG | 0.500442 | 7_4:+63042139 | Msa1169940:CDS |
| CGACGCTCCCCGTACTTACC+AGG | 0.500920 | 7_4:+63041835 | Msa1169940:CDS |
| ATACTGATGCTGCTCCTGCT+AGG | 0.512955 | 7_4:+63042233 | Msa1169940:CDS |
| AACCAAATTGTTGACCTTGG+AGG | 0.515992 | 7_4:-63042289 | None:intergenic |
| CTTCATCGCAGTCTCAATGC+TGG | 0.528653 | 7_4:+63042259 | Msa1169940:CDS |
| CTGCGATGAAGAATCCTAGC+AGG | 0.528957 | 7_4:-63042247 | None:intergenic |
| GATGTTTGGGAGGGAAGTCA+TGG | 0.529266 | 7_4:-63041645 | None:intergenic |
| CCCCGTACTTACCAGGAGGT+CGG | 0.536020 | 7_4:+63041842 | Msa1169940:CDS |
| AGCTGATTGTCAGTGGAGAA+GGG | 0.540667 | 7_4:+63041915 | Msa1169940:CDS |
| CCGAATCGTAACTGCTTCAC+CGG | 0.541881 | 7_4:-63041957 | None:intergenic |
| ATTGAGGTTATGGTCAATCC+TGG | 0.543767 | 7_4:-63044060 | None:intergenic |
| ATGCTGGTTCTGCTCCTCCA+AGG | 0.545858 | 7_4:+63042275 | Msa1169940:CDS |
| CTTCGTTGTTGATGTTTGGG+AGG | 0.546139 | 7_4:-63041655 | None:intergenic |
| CTCAAAGGGGATGAAAATGA+TGG | 0.547136 | 7_4:-63044689 | None:intergenic |
| GTCGTCTTCGTCATCATCAT+CGG | 0.554571 | 7_4:-63041816 | None:intergenic |
| TAGTTGTAGAACCCAAATTG+AGG | 0.555399 | 7_4:-63044076 | None:intergenic |
| CTCGAGGTGGGTGGTTGTGG+AGG | 0.556596 | 7_4:-63041684 | None:intergenic |
| TATGTTGTGTGGGAATGGCA+TGG | 0.562974 | 7_4:+63042025 | Msa1169940:CDS |
| GGAAGGGGAGTATGTTGTGT+GGG | 0.567393 | 7_4:+63042015 | Msa1169940:CDS |
| GTGTCATGACGATGAGGAAG+GGG | 0.570208 | 7_4:+63042000 | Msa1169940:CDS |
| TTCGTTGTTGATGTTTGGGA+GGG | 0.579691 | 7_4:-63041654 | None:intergenic |
| AATTGGGAGAGCATCCCTCT+CGG | 0.583194 | 7_4:-63044012 | None:intergenic |
| CGTCCTTATTCACAACCAGT+TGG | 0.586989 | 7_4:+63042133 | Msa1169940:CDS |
| TGTGAATAAGGACGCTCCGA+AGG | 0.588363 | 7_4:-63042124 | None:intergenic |
| GCGAAGAGTCGAGAGTCGAA+GGG | 0.589719 | 7_4:+63041882 | Msa1169940:CDS |
| CGAGTAAGAGATTCTCGAGG+TGG | 0.590939 | 7_4:-63041697 | None:intergenic |
| GGGTGTCATGACGATGAGGA+AGG | 0.592367 | 7_4:+63041998 | Msa1169940:CDS |
| GTTTGATGGGTTGCAAGCAG+AGG | 0.599701 | 7_4:+63044660 | Msa1169940:CDS |
| TGGGGTATAATGATGATCAT+GGG | 0.601518 | 7_4:+63042056 | Msa1169940:CDS |
| CATGAACTGCATGGCCGAGA+GGG | 0.603779 | 7_4:+63043998 | Msa1169940:CDS |
| GCTGATTGTCAGTGGAGAAG+GGG | 0.605349 | 7_4:+63041916 | Msa1169940:CDS |
| TAATTCCCATAAATATACTC+AGG | 0.608602 | 7_4:-63042085 | None:intergenic |
| ATTATCAAGCTGATTGTCAG+TGG | 0.609061 | 7_4:+63041908 | Msa1169940:CDS |
| ATAATCTTTGCTTCTCAAAG+GGG | 0.611929 | 7_4:-63044702 | None:intergenic |
| ATGTTGTGTGGGAATGGCAT+GGG | 0.613843 | 7_4:+63042026 | Msa1169940:CDS |
| GGTGTCATGACGATGAGGAA+GGG | 0.614911 | 7_4:+63041999 | Msa1169940:CDS |
| AATGGCATGGGCATATCATG+GGG | 0.631702 | 7_4:+63042038 | Msa1169940:CDS |
| AGGAAGGGGAGTATGTTGTG+TGG | 0.641212 | 7_4:+63042014 | Msa1169940:CDS |
| GCCGAAAAGGAAATCCTCGA+AGG | 0.646398 | 7_4:-63041792 | None:intergenic |
| CGAAGAGTCGAGAGTCGAAG+GGG | 0.646968 | 7_4:+63041883 | Msa1169940:CDS |
| TGAAGCTGATGTTGTCAGCA+AGG | 0.660229 | 7_4:+63042183 | Msa1169940:CDS |
| TAAGAGATTCTCGAGGTGGG+TGG | 0.661338 | 7_4:-63041693 | None:intergenic |
| GAGTAAGAGATTCTCGAGGT+GGG | 0.663187 | 7_4:-63041696 | None:intergenic |
| GAAGCTGATGTTGTCAGCAA+GGG | 0.664378 | 7_4:+63042184 | Msa1169940:CDS |
| AAATTTGTGCATGAACTGCA+TGG | 0.671265 | 7_4:+63043989 | Msa1169940:CDS |
| TGAAATGAAAGAGATATGCA+GGG | 0.672780 | 7_4:-63041602 | None:intergenic |
| CGCTCCCCGTACTTACCAGG+AGG | 0.697086 | 7_4:+63041838 | Msa1169940:CDS |
| TGTTGGGTGTCATGACGATG+AGG | 0.711770 | 7_4:+63041994 | Msa1169940:CDS |
| GCATGAACTGCATGGCCGAG+AGG | 0.734910 | 7_4:+63043997 | Msa1169940:CDS |
| TTTCGAGTAAGAGATTCTCG+AGG | 0.744371 | 7_4:-63041700 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAATTTTATTCCTT+TGG | + | chr7_4:63042327-63042346 | Msa1169940:intron | 10.0% |
| !!! | TTATGGTTTAAAATACAATT+TGG | + | chr7_4:63042871-63042890 | Msa1169940:intron | 15.0% |
| !!! | TATGGTTTAAAATACAATTT+GGG | + | chr7_4:63042872-63042891 | Msa1169940:intron | 15.0% |
| !!! | TTTTGGTAATTTAATGAATT+CGG | + | chr7_4:63042996-63043015 | Msa1169940:intron | 15.0% |
| !!! | AGTATTTTAAACCATATTTA+GGG | - | chr7_4:63043672-63043691 | None:intergenic | 15.0% |
| !!! | TAGTATTTTAAACCATATTT+AGG | - | chr7_4:63043673-63043692 | None:intergenic | 15.0% |
| !!! | AATATGGTTTAAAATACTAT+TGG | + | chr7_4:63043674-63043693 | Msa1169940:intron | 15.0% |
| !! | TAAGGTTGTTAAATGAATAT+CGG | - | chr7_4:63042909-63042928 | None:intergenic | 20.0% |
| !! | AATCACTCTAGTTATTAAAT+GGG | + | chr7_4:63043448-63043467 | Msa1169940:intron | 20.0% |
| !!! | TAATTTAACTTCCCTAAATA+TGG | + | chr7_4:63043658-63043677 | Msa1169940:intron | 20.0% |
| !!! | TTTTGGTAATTTAACGAATT+CGG | + | chr7_4:63043803-63043822 | Msa1169940:intron | 20.0% |
| !!! | TGAGCTTTAATTAAACAAAA+AGG | - | chr7_4:63044250-63044269 | None:intergenic | 20.0% |
| !! | TTGTTTAATTAAAGCTCAAA+TGG | + | chr7_4:63044252-63044271 | Msa1169940:intron | 20.0% |
| !! | TGTTTAATTAAAGCTCAAAT+GGG | + | chr7_4:63044253-63044272 | Msa1169940:intron | 20.0% |
| !!! | TAAAAGCACAAAAAGATTAT+AGG | - | chr7_4:63044427-63044446 | None:intergenic | 20.0% |
| !!! | ATCTTTTATGTTTTGATGTT+TGG | + | chr7_4:63044573-63044592 | Msa1169940:intron | 20.0% |
| !!! | ATTGAAATTTCAAGTTTGAT+GGG | + | chr7_4:63044647-63044666 | Msa1169940:CDS | 20.0% |
| !!! | CTTTAAAATCATACTTGTAA+AGG | + | chr7_4:63044784-63044803 | Msa1169940:three_prime_UTR | 20.0% |
| !!! | GAGACATGATTTTTTATTTT+TGG | + | chr7_4:63044811-63044830 | Msa1169940:three_prime_UTR | 20.0% |
| ! | TAATTCCCATAAATATACTC+AGG | - | chr7_4:63042088-63042107 | None:intergenic | 25.0% |
| !! | TTTATGGGAATTATTTTCAG+AGG | + | chr7_4:63042095-63042114 | Msa1169940:CDS | 25.0% |
| ! | ACAACAAAAAATCAAACCAA+AGG | - | chr7_4:63042346-63042365 | None:intergenic | 25.0% |
| !! | GTGAATTTTGTTAGATTGTT+TGG | + | chr7_4:63042375-63042394 | Msa1169940:intron | 25.0% |
| !! | AATTTTGTTAGATTGTTTGG+TGG | + | chr7_4:63042378-63042397 | Msa1169940:intron | 25.0% |
| !! | ATTTTGTTAGATTGTTTGGT+GGG | + | chr7_4:63042379-63042398 | Msa1169940:intron | 25.0% |
| !! | TGGATTTAAAGTTATTGATC+CGG | + | chr7_4:63042672-63042691 | Msa1169940:intron | 25.0% |
| !!! | TATTTTAACTTCTCCAAATG+TGG | + | chr7_4:63042847-63042866 | Msa1169940:intron | 25.0% |
| ! | TTTAAACCATAAACCACATT+TGG | - | chr7_4:63042863-63042882 | None:intergenic | 25.0% |
| ! | ATTCAAAACACAATCTTGAT+AGG | - | chr7_4:63043081-63043100 | None:intergenic | 25.0% |
| ! | AATTAGCAAATTGAAACCAT+TGG | - | chr7_4:63043144-63043163 | None:intergenic | 25.0% |
| ! | CTAAAATGATAGGTACAATT+GGG | + | chr7_4:63043358-63043377 | Msa1169940:intron | 25.0% |
| !! | TTTGTTATCTACATCAAATG+AGG | - | chr7_4:63043422-63043441 | None:intergenic | 25.0% |
| ! | CAATCACTCTAGTTATTAAA+TGG | + | chr7_4:63043447-63043466 | Msa1169940:intron | 25.0% |
| !!! | GGATGTGTTGATTTTTATTA+TGG | + | chr7_4:63043559-63043578 | Msa1169940:intron | 25.0% |
| ! | TCTAAAAATGTGATTCTTGT+CGG | + | chr7_4:63043770-63043789 | Msa1169940:intron | 25.0% |
| ! | ACATAAAAGATTCATTTCAG+TGG | - | chr7_4:63044564-63044583 | None:intergenic | 25.0% |
| !!! | CATTGAAATTTCAAGTTTGA+TGG | + | chr7_4:63044646-63044665 | Msa1169940:CDS | 25.0% |
| ! | AATAATCTTTGCTTCTCAAA+GGG | - | chr7_4:63044706-63044725 | None:intergenic | 25.0% |
| ! | AAATAATCTTTGCTTCTCAA+AGG | - | chr7_4:63044707-63044726 | None:intergenic | 25.0% |
| !! | ACAGATGCAATCTTAATTTT+GGG | - | chr7_4:63044751-63044770 | None:intergenic | 25.0% |
| !! | AACAGATGCAATCTTAATTT+TGG | - | chr7_4:63044752-63044771 | None:intergenic | 25.0% |
| ! | AGTTATTAAAAAACCATGTC+TGG | - | chr7_4:63044843-63044862 | None:intergenic | 25.0% |
| ! | AATAACTCATTATCTTTGCT+TGG | + | chr7_4:63044856-63044875 | Msa1169940:three_prime_UTR | 25.0% |
| GTGAATTGTGAAATGGAAAT+GGG | - | chr7_4:63041578-63041597 | None:intergenic | 30.0% | |
| TGTGAATTGTGAAATGGAAA+TGG | - | chr7_4:63041579-63041598 | None:intergenic | 30.0% | |
| TGAAATGAAAGAGATATGCA+GGG | - | chr7_4:63041605-63041624 | None:intergenic | 30.0% | |
| AATCTTCGTTGTTGATGTTT+GGG | - | chr7_4:63041661-63041680 | None:intergenic | 30.0% | |
| ! | AAGTTGAATCCTTTTCATCA+AGG | - | chr7_4:63041726-63041745 | None:intergenic | 30.0% |
| ! | TTTTCGCCTGAGTATATTTA+TGG | + | chr7_4:63042079-63042098 | Msa1169940:CDS | 30.0% |
| TTTCGCCTGAGTATATTTAT+GGG | + | chr7_4:63042080-63042099 | Msa1169940:CDS | 30.0% | |
| AAAAACCAAATTGTTGACCT+TGG | - | chr7_4:63042295-63042314 | None:intergenic | 30.0% | |
| TGTAGATGAATTTAGCTGTT+AGG | + | chr7_4:63042490-63042509 | Msa1169940:intron | 30.0% | |
| TTGAGCTATTAGATGAAGAT+TGG | + | chr7_4:63042652-63042671 | Msa1169940:intron | 30.0% | |
| CATTAAATTACCAAAACCCA+TGG | - | chr7_4:63042992-63043011 | None:intergenic | 30.0% | |
| !! | TCAAGATTGTGTTTTGAATC+TGG | + | chr7_4:63043082-63043101 | Msa1169940:intron | 30.0% |
| ! | GTTTAGGATGCTAAAATGAT+AGG | + | chr7_4:63043348-63043367 | Msa1169940:intron | 30.0% |
| GCTAAAATGATAGGTACAAT+TGG | + | chr7_4:63043357-63043376 | Msa1169940:intron | 30.0% | |
| AACACAATAACAACATGGTT+TGG | - | chr7_4:63043599-63043618 | None:intergenic | 30.0% | |
| CATTGAACACAATAACAACA+TGG | - | chr7_4:63043604-63043623 | None:intergenic | 30.0% | |
| ! | CATGTTGTTATTGTGTTCAA+TGG | + | chr7_4:63043602-63043621 | Msa1169940:intron | 30.0% |
| CGTTAAATTACCAAAATCCA+TGG | - | chr7_4:63043799-63043818 | None:intergenic | 30.0% | |
| AATCTTGATATGTGAGACAT+AGG | - | chr7_4:63043876-63043895 | None:intergenic | 30.0% | |
| !! | TCAAGATTGTGTTTTGAATC+TGG | + | chr7_4:63043082-63043101 | Msa1169940:intron | 30.0% |
| ATTGACCATAACCTCAATTT+GGG | + | chr7_4:63044065-63044084 | Msa1169940:CDS | 30.0% | |
| TAATTTCCGATGATGTAACA+GGG | - | chr7_4:63044195-63044214 | None:intergenic | 30.0% | |
| ATAATTTCCGATGATGTAAC+AGG | - | chr7_4:63044196-63044215 | None:intergenic | 30.0% | |
| ATAATCTTTGCTTCTCAAAG+GGG | - | chr7_4:63044705-63044724 | None:intergenic | 30.0% | |
| !! | GGGTTTTGTGAATTGTGAAA+TGG | - | chr7_4:63041585-63041604 | None:intergenic | 35.0% |
| GTGAAATGAAAGAGATATGC+AGG | - | chr7_4:63041606-63041625 | None:intergenic | 35.0% | |
| GAATCTTCGTTGTTGATGTT+TGG | - | chr7_4:63041662-63041681 | None:intergenic | 35.0% | |
| TACTCGAAACCTTGATGAAA+AGG | + | chr7_4:63041714-63041733 | Msa1169940:CDS | 35.0% | |
| ! | GAAATCCTCGAAGGATTTTT+GGG | - | chr7_4:63041786-63041805 | None:intergenic | 35.0% |
| ATTATCAAGCTGATTGTCAG+TGG | + | chr7_4:63041908-63041927 | Msa1169940:CDS | 35.0% | |
| ATGGGGTATAATGATGATCA+TGG | + | chr7_4:63042055-63042074 | Msa1169940:CDS | 35.0% | |
| TGGGGTATAATGATGATCAT+GGG | + | chr7_4:63042056-63042075 | Msa1169940:CDS | 35.0% | |
| GAATTTAGCTGTTAGGAAGT+TGG | + | chr7_4:63042497-63042516 | Msa1169940:intron | 35.0% | |
| ! | GAAGTTGGATTTTCTGTTCT+GGG | + | chr7_4:63042512-63042531 | Msa1169940:intron | 35.0% |
| ! | GTTCTGGGTTTAAGATGTTT+AGG | + | chr7_4:63042527-63042546 | Msa1169940:intron | 35.0% |
| ! | GTTTAAGATGTTTAGGTGGT+AGG | + | chr7_4:63042534-63042553 | Msa1169940:intron | 35.0% |
| GTAGATAATAAATGACGACG+CGG | + | chr7_4:63042611-63042630 | Msa1169940:intron | 35.0% | |
| CCATGAAGTCTCTATCAAAT+TGG | - | chr7_4:63042714-63042733 | None:intergenic | 35.0% | |
| CCAATTTGATAGAGACTTCA+TGG | + | chr7_4:63042711-63042730 | Msa1169940:intron | 35.0% | |
| TTGATAGAGACTTCATGGAA+CGG | + | chr7_4:63042716-63042735 | Msa1169940:intron | 35.0% | |
| CATTGAACACAACAACAACA+GGG | - | chr7_4:63042789-63042808 | None:intergenic | 35.0% | |
| !! | GTTCAATGGATTGATGTTGT+TGG | + | chr7_4:63042801-63042820 | Msa1169940:intron | 35.0% |
| ACTTCTCCAAATGTGGTTTA+TGG | + | chr7_4:63042854-63042873 | Msa1169940:intron | 35.0% | |
| AGTCACAACTTAAGTAGTTG+CGG | - | chr7_4:63042935-63042954 | None:intergenic | 35.0% | |
| TTGAATCTGGTTGCTGATAT+TGG | + | chr7_4:63043095-63043114 | Msa1169940:intron | 35.0% | |
| GTCAATATGTCTTCATCCAA+TGG | + | chr7_4:63043125-63043144 | Msa1169940:intron | 35.0% | |
| !!! | AGAACCAAATTTTGAGGTCA+TGG | - | chr7_4:63043275-63043294 | None:intergenic | 35.0% |
| ! | GTTGCTAGAACCAAATTTTG+AGG | - | chr7_4:63043281-63043300 | None:intergenic | 35.0% |
| GGATGAAGTTTGGATCAAAT+TGG | - | chr7_4:63043530-63043549 | None:intergenic | 35.0% | |
| CTGATCTTCATCTAATGACA+TGG | - | chr7_4:63043630-63043649 | None:intergenic | 35.0% | |
| TAGGGAAGTTAAATTACGAG+TGG | - | chr7_4:63043654-63043673 | None:intergenic | 35.0% | |
| CTAGGTTATTGGATGAAGAT+CGG | - | chr7_4:63043712-63043731 | None:intergenic | 35.0% | |
| AAATTTGTGCATGAACTGCA+TGG | + | chr7_4:63043989-63044008 | Msa1169940:CDS | 35.0% | |
| GATTGACCATAACCTCAATT+TGG | + | chr7_4:63044064-63044083 | Msa1169940:CDS | 35.0% | |
| TAGAACCCAAATTGAGGTTA+TGG | - | chr7_4:63044073-63044092 | None:intergenic | 35.0% | |
| TAGTTGTAGAACCCAAATTG+AGG | - | chr7_4:63044079-63044098 | None:intergenic | 35.0% | |
| AGTTTATTTGTGTGTGTGTG+TGG | + | chr7_4:63044099-63044118 | Msa1169940:intron | 35.0% | |
| GTTTATTTGTGTGTGTGTGT+GGG | + | chr7_4:63044100-63044119 | Msa1169940:intron | 35.0% | |
| CGGAAATTATGTACTTGTGT+TGG | + | chr7_4:63044206-63044225 | Msa1169940:intron | 35.0% | |
| GTTGGTTGCTATGGTTAATT+TGG | + | chr7_4:63044224-63044243 | Msa1169940:intron | 35.0% | |
| ATTTCTTACATGTGTAGCTC+TGG | - | chr7_4:63044299-63044318 | None:intergenic | 35.0% | |
| AGCTACACATGTAAGAAATG+TGG | + | chr7_4:63044300-63044319 | Msa1169940:intron | 35.0% | |
| TAAATGATCTGTTAGCAGTG+CGG | - | chr7_4:63044367-63044386 | None:intergenic | 35.0% | |
| !!! | GAAATGTTTTGTTTTCCCTG+TGG | + | chr7_4:63044469-63044488 | Msa1169940:intron | 35.0% |
| ! | TTCTTAGCATTTTTGTCACC+TGG | + | chr7_4:63044514-63044533 | Msa1169940:intron | 35.0% |
| TGCACTTAATGCAATAAACC+AGG | - | chr7_4:63044535-63044554 | None:intergenic | 35.0% | |
| ACTTCTATGCTGAAATTGAC+AGG | + | chr7_4:63044608-63044627 | Msa1169940:intron | 35.0% | |
| ! | TTTTTGGATACAACCAGACA+TGG | + | chr7_4:63044827-63044846 | Msa1169940:three_prime_UTR | 35.0% |
| TTCGTTGTTGATGTTTGGGA+GGG | - | chr7_4:63041657-63041676 | None:intergenic | 40.0% | |
| ! | TTTCGAGTAAGAGATTCTCG+AGG | - | chr7_4:63041703-63041722 | None:intergenic | 40.0% |
| ! | GGAAATCCTCGAAGGATTTT+TGG | - | chr7_4:63041787-63041806 | None:intergenic | 40.0% |
| ! | TCCTTCGAGGATTTCCTTTT+CGG | + | chr7_4:63041791-63041810 | Msa1169940:CDS | 40.0% |
| GGGAGAGTAGTATTTGTGTT+GGG | + | chr7_4:63041978-63041997 | Msa1169940:CDS | 40.0% | |
| ACTCCAACTGGTTGTGAATA+AGG | - | chr7_4:63042139-63042158 | None:intergenic | 40.0% | |
| TATTCACAACCAGTTGGAGT+TGG | + | chr7_4:63042139-63042158 | Msa1169940:CDS | 40.0% | |
| AACCAAATTGTTGACCTTGG+AGG | - | chr7_4:63042292-63042311 | None:intergenic | 40.0% | |
| ! | GGAAGTTGGATTTTCTGTTC+TGG | + | chr7_4:63042511-63042530 | Msa1169940:intron | 40.0% |
| ! | CTGGGTTTAAGATGTTTAGG+TGG | + | chr7_4:63042530-63042549 | Msa1169940:intron | 40.0% |
| TTTAGGTGGTAGGCACAAAT+AGG | + | chr7_4:63042544-63042563 | Msa1169940:intron | 40.0% | |
| TTAGGTGGTAGGCACAAATA+GGG | + | chr7_4:63042545-63042564 | Msa1169940:intron | 40.0% | |
| TACATCAAATGAGCTTCCCT+AGG | - | chr7_4:63042594-63042613 | None:intergenic | 40.0% | |
| CTCTATCAAATTGGAGCCAT+TGG | - | chr7_4:63042705-63042724 | None:intergenic | 40.0% | |
| AACACAACAACAACAGGGTT+TGG | - | chr7_4:63042784-63042803 | None:intergenic | 40.0% | |
| CCATTGAACACAACAACAAC+AGG | - | chr7_4:63042790-63042809 | None:intergenic | 40.0% | |
| ! | CCTGTTGTTGTTGTGTTCAA+TGG | + | chr7_4:63042787-63042806 | Msa1169940:intron | 40.0% |
| CTTAAGTAGTTGCGGATCTA+AGG | - | chr7_4:63042927-63042946 | None:intergenic | 40.0% | |
| TCCAAAGTCGTGATTCTTGT+CGG | + | chr7_4:63042963-63042982 | Msa1169940:intron | 40.0% | |
| TGATTCTTGTCGGAAACCAT+GGG | + | chr7_4:63042973-63042992 | Msa1169940:intron | 40.0% | |
| TTGATCATAGTCGCTTCAGT+TGG | + | chr7_4:63043036-63043055 | Msa1169940:intron | 40.0% | |
| TTGGCCATGACCTCAAAATT+TGG | + | chr7_4:63043268-63043287 | Msa1169940:intron | 40.0% | |
| TGTGGATGAATTTGGCTGTT+AGG | + | chr7_4:63043311-63043330 | Msa1169940:intron | 40.0% | |
| GAATTTGGCTGTTAGGAAGT+TGG | + | chr7_4:63043318-63043337 | Msa1169940:intron | 40.0% | |
| GGAAGTTGGATCACATGTTT+AGG | + | chr7_4:63043332-63043351 | Msa1169940:intron | 40.0% | |
| GGGAGCTATTTGATGAAGAT+TGG | + | chr7_4:63043468-63043487 | Msa1169940:intron | 40.0% | |
| TTGGATCAAATTGGAACCAC+TGG | - | chr7_4:63043521-63043540 | None:intergenic | 40.0% | |
| TTGATCCAAACTTCATCCGA+CGG | + | chr7_4:63043532-63043551 | Msa1169940:intron | 40.0% | |
| CACAGCTACTGAAATTGTGA+CGG | + | chr7_4:63043740-63043759 | Msa1169940:intron | 40.0% | |
| ! | TTGTCGGAAACCATGGATTT+TGG | + | chr7_4:63043786-63043805 | Msa1169940:intron | 40.0% |
| ATTGAGGTTATGGTCAATCC+TGG | - | chr7_4:63044063-63044082 | None:intergenic | 40.0% | |
| ! | TTTTGAGCTTATGTGTTGCG+TGG | + | chr7_4:63044159-63044178 | Msa1169940:intron | 40.0% |
| !! | TGTACTTGTGTTGGTTGCTA+TGG | + | chr7_4:63044215-63044234 | Msa1169940:intron | 40.0% |
| !!! | ATGTTTTGTTTTCCCTGTGG+TGG | + | chr7_4:63044472-63044491 | Msa1169940:intron | 40.0% |
| CTCAAAGGGGATGAAAATGA+TGG | - | chr7_4:63044692-63044711 | None:intergenic | 40.0% | |
| GGGATTTGCACTGTGAAAAT+GGG | - | chr7_4:63044731-63044750 | None:intergenic | 40.0% | |
| TGGGATTTGCACTGTGAAAA+TGG | - | chr7_4:63044732-63044751 | None:intergenic | 40.0% | |
| CTTCGTTGTTGATGTTTGGG+AGG | - | chr7_4:63041658-63041677 | None:intergenic | 45.0% | |
| GAGTAAGAGATTCTCGAGGT+GGG | - | chr7_4:63041699-63041718 | None:intergenic | 45.0% | |
| !! | CCTCGAAGGATTTTTGGGAA+GGG | - | chr7_4:63041781-63041800 | None:intergenic | 45.0% |
| !! | TCCTCGAAGGATTTTTGGGA+AGG | - | chr7_4:63041782-63041801 | None:intergenic | 45.0% |
| GTCGTCTTCGTCATCATCAT+CGG | - | chr7_4:63041819-63041838 | None:intergenic | 45.0% | |
| AAGCTGATTGTCAGTGGAGA+AGG | + | chr7_4:63041914-63041933 | Msa1169940:CDS | 45.0% | |
| AGCTGATTGTCAGTGGAGAA+GGG | + | chr7_4:63041915-63041934 | Msa1169940:CDS | 45.0% | |
| GTAACTGCTTCACCGGAATT+CGG | - | chr7_4:63041953-63041972 | None:intergenic | 45.0% | |
| CGGGAGAGTAGTATTTGTGT+TGG | + | chr7_4:63041977-63041996 | Msa1169940:CDS | 45.0% | |
| TATGTTGTGTGGGAATGGCA+TGG | + | chr7_4:63042025-63042044 | Msa1169940:CDS | 45.0% | |
| ATGTTGTGTGGGAATGGCAT+GGG | + | chr7_4:63042026-63042045 | Msa1169940:CDS | 45.0% | |
| GAATGGCATGGGCATATCAT+GGG | + | chr7_4:63042037-63042056 | Msa1169940:CDS | 45.0% | |
| AATGGCATGGGCATATCATG+GGG | + | chr7_4:63042038-63042057 | Msa1169940:CDS | 45.0% | |
| ! | TTTTCAGAGGACTGTGCCTT+CGG | + | chr7_4:63042108-63042127 | Msa1169940:CDS | 45.0% |
| CGTCCTTATTCACAACCAGT+TGG | + | chr7_4:63042133-63042152 | Msa1169940:CDS | 45.0% | |
| TCTTCATCTCCAACTCCAAC+TGG | - | chr7_4:63042151-63042170 | None:intergenic | 45.0% | |
| TGAAGCTGATGTTGTCAGCA+AGG | + | chr7_4:63042183-63042202 | Msa1169940:CDS | 45.0% | |
| GAAGCTGATGTTGTCAGCAA+GGG | + | chr7_4:63042184-63042203 | Msa1169940:CDS | 45.0% | |
| TGTTGTCAGCAAGGGTTTGA+AGG | + | chr7_4:63042192-63042211 | Msa1169940:CDS | 45.0% | |
| CTCCTCCAAGGTCAACAATT+TGG | + | chr7_4:63042287-63042306 | Msa1169940:intron | 45.0% | |
| GGTAGGCACAAATAGGGTTT+CGG | + | chr7_4:63042551-63042570 | Msa1169940:intron | 45.0% | |
| TTGATCCGGTCTTCATCCAA+TGG | + | chr7_4:63042686-63042705 | Msa1169940:intron | 45.0% | |
| TCCGACAAGAATCACGACTT+TGG | - | chr7_4:63042967-63042986 | None:intergenic | 45.0% | |
| GTGATTCTTGTCGGAAACCA+TGG | + | chr7_4:63042972-63042991 | Msa1169940:intron | 45.0% | |
| ! | TTGTCGGAAACCATGGGTTT+TGG | + | chr7_4:63042979-63042998 | Msa1169940:intron | 45.0% |
| CCTGAACTGCATAACTGAGA+GGG | + | chr7_4:63043199-63043218 | Msa1169940:intron | 45.0% | |
| TCCTTCGCTGTGGATGAATT+TGG | + | chr7_4:63043303-63043322 | Msa1169940:intron | 45.0% | |
| CCGAGATAACAACCTGGTTT+GGG | - | chr7_4:63043395-63043414 | None:intergenic | 45.0% | |
| CCCAAACCAGGTTGTTATCT+CGG | + | chr7_4:63043392-63043411 | Msa1169940:intron | 45.0% | |
| CCAAACCAGGTTGTTATCTC+GGG | + | chr7_4:63043393-63043412 | Msa1169940:intron | 45.0% | |
| CAAACCAGGTTGTTATCTCG+GGG | + | chr7_4:63043394-63043413 | Msa1169940:intron | 45.0% | |
| ATCAACACATCCACTACCGT+CGG | - | chr7_4:63043551-63043570 | None:intergenic | 45.0% | |
| GTGTCGTGGATCTAGGTTAT+TGG | - | chr7_4:63043723-63043742 | None:intergenic | 45.0% | |
| CAATTTCAGTAGCTGTGTCG+TGG | - | chr7_4:63043737-63043756 | None:intergenic | 45.0% | |
| GTGATTCTTGTCGGAAACCA+TGG | + | chr7_4:63042972-63042991 | Msa1169940:intron | 45.0% | |
| CCAACTGAAGTGACTGTGAT+TGG | - | chr7_4:63043845-63043864 | None:intergenic | 45.0% | |
| CCAATCACAGTCACTTCAGT+TGG | + | chr7_4:63043842-63043861 | Msa1169940:intron | 45.0% | |
| TATTTGTGTGTGTGTGTGGG+TGG | + | chr7_4:63044103-63044122 | Msa1169940:intron | 45.0% | |
| ATTTGTGTGTGTGTGTGGGT+GGG | + | chr7_4:63044104-63044123 | Msa1169940:intron | 45.0% | |
| CCAACACCCTGTTACATCAT+CGG | + | chr7_4:63044186-63044205 | Msa1169940:intron | 45.0% | |
| AAAGCTCAAATGGGCGATGA+AGG | + | chr7_4:63044262-63044281 | Msa1169940:intron | 45.0% | |
| TAAGTTGTCTTGCCACCACA+GGG | - | chr7_4:63044487-63044506 | None:intergenic | 45.0% | |
| GATGTTTGGGAGGGAAGTCA+TGG | - | chr7_4:63041648-63041667 | None:intergenic | 50.0% | |
| TAAGAGATTCTCGAGGTGGG+TGG | - | chr7_4:63041696-63041715 | None:intergenic | 50.0% | |
| CGAGTAAGAGATTCTCGAGG+TGG | - | chr7_4:63041700-63041719 | None:intergenic | 50.0% | |
| CTGTCGTCATTGACGTTGTC+TGG | - | chr7_4:63041755-63041774 | None:intergenic | 50.0% | |
| CCCTTCCCAAAAATCCTTCG+AGG | + | chr7_4:63041778-63041797 | Msa1169940:CDS | 50.0% | |
| GCCGAAAAGGAAATCCTCGA+AGG | - | chr7_4:63041795-63041814 | None:intergenic | 50.0% | |
| CATCATCATCGGAGCCGAAA+AGG | - | chr7_4:63041808-63041827 | None:intergenic | 50.0% | |
| GCTGATTGTCAGTGGAGAAG+GGG | + | chr7_4:63041916-63041935 | Msa1169940:CDS | 50.0% | |
| GATACGCTGAAGCCGAATTC+CGG | + | chr7_4:63041938-63041957 | Msa1169940:CDS | 50.0% | |
| CCGAATCGTAACTGCTTCAC+CGG | - | chr7_4:63041960-63041979 | None:intergenic | 50.0% | |
| CCGGTGAAGCAGTTACGATT+CGG | + | chr7_4:63041957-63041976 | Msa1169940:CDS | 50.0% | |
| CGGTGAAGCAGTTACGATTC+GGG | + | chr7_4:63041958-63041977 | Msa1169940:CDS | 50.0% | |
| ! | TGTTGGGTGTCATGACGATG+AGG | + | chr7_4:63041994-63042013 | Msa1169940:CDS | 50.0% |
| ! | GGTGTCATGACGATGAGGAA+GGG | + | chr7_4:63041999-63042018 | Msa1169940:CDS | 50.0% |
| GTGTCATGACGATGAGGAAG+GGG | + | chr7_4:63042000-63042019 | Msa1169940:CDS | 50.0% | |
| ! | AGGAAGGGGAGTATGTTGTG+TGG | + | chr7_4:63042014-63042033 | Msa1169940:CDS | 50.0% |
| ! | GGAAGGGGAGTATGTTGTGT+GGG | + | chr7_4:63042015-63042034 | Msa1169940:CDS | 50.0% |
| ! | GGGAGTATGTTGTGTGGGAA+TGG | + | chr7_4:63042020-63042039 | Msa1169940:CDS | 50.0% |
| GGAATGGCATGGGCATATCA+TGG | + | chr7_4:63042036-63042055 | Msa1169940:CDS | 50.0% | |
| TGTGAATAAGGACGCTCCGA+AGG | - | chr7_4:63042127-63042146 | None:intergenic | 50.0% | |
| ATACTGATGCTGCTCCTGCT+AGG | + | chr7_4:63042233-63042252 | Msa1169940:CDS | 50.0% | |
| CTGCGATGAAGAATCCTAGC+AGG | - | chr7_4:63042250-63042269 | None:intergenic | 50.0% | |
| CTTCATCGCAGTCTCAATGC+TGG | + | chr7_4:63042259-63042278 | Msa1169940:CDS | 50.0% | |
| AATAGGGTTTCGGAACACCC+TGG | + | chr7_4:63042561-63042580 | Msa1169940:intron | 50.0% | |
| AACACCCTGGTTGTGATCCT+AGG | + | chr7_4:63042574-63042593 | Msa1169940:intron | 50.0% | |
| ACACCCTGGTTGTGATCCTA+GGG | + | chr7_4:63042575-63042594 | Msa1169940:intron | 50.0% | |
| CTTCCCTAGGATCACAACCA+GGG | - | chr7_4:63042581-63042600 | None:intergenic | 50.0% | |
| TGGAGCCATTGGATGAAGAC+CGG | - | chr7_4:63042694-63042713 | None:intergenic | 50.0% | |
| GCCTGAACTGCATAACTGAG+AGG | + | chr7_4:63043198-63043217 | Msa1169940:intron | 50.0% | |
| CCCTCTCAGTTATGCAGTTC+AGG | - | chr7_4:63043202-63043221 | None:intergenic | 50.0% | |
| CTAGCAACTTTCCTTCGCTG+TGG | + | chr7_4:63043293-63043312 | Msa1169940:intron | 50.0% | |
| GCCAAATTCATCCACAGCGA+AGG | - | chr7_4:63043307-63043326 | None:intergenic | 50.0% | |
| !! | AACAACCTGGTTTGGGCGTT+CGG | - | chr7_4:63043388-63043407 | None:intergenic | 50.0% |
| CCCGAGATAACAACCTGGTT+TGG | - | chr7_4:63043396-63043415 | None:intergenic | 50.0% | |
| TTGATCCGATCGTCATCCAG+TGG | + | chr7_4:63043502-63043521 | Msa1169940:intron | 50.0% | |
| TGGAACCACTGGATGACGAT+CGG | - | chr7_4:63043510-63043529 | None:intergenic | 50.0% | |
| CACTACCGTCGGATGAAGTT+TGG | - | chr7_4:63043540-63043559 | None:intergenic | 50.0% | |
| CAAACTTCATCCGACGGTAG+TGG | + | chr7_4:63043538-63043557 | Msa1169940:intron | 50.0% | |
| AGTAGCTGTGTCGTGGATCT+AGG | - | chr7_4:63043730-63043749 | None:intergenic | 50.0% | |
| !! | AATTGGGAGAGCATCCCTCT+CGG | - | chr7_4:63044015-63044034 | None:intergenic | 50.0% |
| GGCTGACGTTGAAGGCAATT+GGG | - | chr7_4:63044031-63044050 | None:intergenic | 50.0% | |
| TGGCTGACGTTGAAGGCAAT+TGG | - | chr7_4:63044032-63044051 | None:intergenic | 50.0% | |
| AGACAACTGGCTGACGTTGA+AGG | - | chr7_4:63044039-63044058 | None:intergenic | 50.0% | |
| GGTCAATCCTGGTAGACAAC+TGG | - | chr7_4:63044052-63044071 | None:intergenic | 50.0% | |
| CCGATGATGTAACAGGGTGT+TGG | - | chr7_4:63044189-63044208 | None:intergenic | 50.0% | |
| CTAAGTTGTCTTGCCACCAC+AGG | - | chr7_4:63044488-63044507 | None:intergenic | 50.0% | |
| !! | GTTTGATGGGTTGCAAGCAG+AGG | + | chr7_4:63044660-63044679 | Msa1169940:CDS | 50.0% |
| ATTCTCGAGGTGGGTGGTTG+TGG | - | chr7_4:63041690-63041709 | None:intergenic | 55.0% | |
| GCGAAGAGTCGAGAGTCGAA+GGG | + | chr7_4:63041882-63041901 | Msa1169940:CDS | 55.0% | |
| CGAAGAGTCGAGAGTCGAAG+GGG | + | chr7_4:63041883-63041902 | Msa1169940:CDS | 55.0% | |
| ! | GGGTGTCATGACGATGAGGA+AGG | + | chr7_4:63041998-63042017 | Msa1169940:CDS | 55.0% |
| !! | ATGCTGGTTCTGCTCCTCCA+AGG | + | chr7_4:63042275-63042294 | Msa1169940:CDS | 55.0% |
| GCTTCCCTAGGATCACAACC+AGG | - | chr7_4:63042582-63042601 | None:intergenic | 55.0% | |
| ! | TTTGAGGTCATGGCCAACCC+CGG | - | chr7_4:63043265-63043284 | None:intergenic | 55.0% |
| !! | ACAACCTGGTTTGGGCGTTC+GGG | - | chr7_4:63043387-63043406 | None:intergenic | 55.0% |
| GGTTCCCCGAGATAACAACC+TGG | - | chr7_4:63043401-63043420 | None:intergenic | 55.0% | |
| CATGAACTGCATGGCCGAGA+GGG | + | chr7_4:63043998-63044017 | Msa1169940:CDS | 55.0% | |
| ACGTCAGCCAGTTGTCTACC+AGG | + | chr7_4:63044042-63044061 | Msa1169940:CDS | 55.0% | |
| CCGACCTCCTGGTAAGTACG+GGG | - | chr7_4:63041845-63041864 | None:intergenic | 60.0% | |
| CCCCGTACTTACCAGGAGGT+CGG | + | chr7_4:63041842-63041861 | Msa1169940:CDS | 60.0% | |
| CCCGACCTCCTGGTAAGTAC+GGG | - | chr7_4:63041846-63041865 | None:intergenic | 60.0% | |
| CCCGTACTTACCAGGAGGTC+GGG | + | chr7_4:63041843-63041862 | Msa1169940:CDS | 60.0% | |
| GCCCGACCTCCTGGTAAGTA+CGG | - | chr7_4:63041847-63041866 | None:intergenic | 60.0% | |
| TTGCTTTCTGCCCGACCTCC+TGG | - | chr7_4:63041856-63041875 | None:intergenic | 60.0% | |
| CGCGAAGAGTCGAGAGTCGA+AGG | + | chr7_4:63041881-63041900 | Msa1169940:CDS | 60.0% | |
| GGCTCGCGTGGAAGGTCATT+GGG | - | chr7_4:63043232-63043251 | None:intergenic | 60.0% | |
| TGGCTCGCGTGGAAGGTCAT+TGG | - | chr7_4:63043233-63043252 | None:intergenic | 60.0% | |
| AATGACCTTCCACGCGAGCC+AGG | + | chr7_4:63043232-63043251 | Msa1169940:intron | 60.0% | |
| ! | ACGCGAGCCAGGTTAGCTAC+CGG | + | chr7_4:63043243-63043262 | Msa1169940:intron | 60.0% |
| GATTCCCGAACGCCCAAACC+AGG | + | chr7_4:63043380-63043399 | Msa1169940:intron | 60.0% | |
| GCATGAACTGCATGGCCGAG+AGG | + | chr7_4:63043997-63044016 | Msa1169940:CDS | 60.0% | |
| TGTGTGTGTGTGTGGGTGGG+CGG | + | chr7_4:63044107-63044126 | Msa1169940:intron | 60.0% | |
| CTCGAGGTGGGTGGTTGTGG+AGG | - | chr7_4:63041687-63041706 | None:intergenic | 65.0% | |
| CGACGCTCCCCGTACTTACC+AGG | + | chr7_4:63041835-63041854 | Msa1169940:CDS | 65.0% | |
| CGCTCCCCGTACTTACCAGG+AGG | + | chr7_4:63041838-63041857 | Msa1169940:CDS | 65.0% | |
| ! | GCTAACCTGGCTCGCGTGGA+AGG | - | chr7_4:63043240-63043259 | None:intergenic | 65.0% |
| ! | GGTAGCTAACCTGGCTCGCG+TGG | - | chr7_4:63043244-63043263 | None:intergenic | 65.0% |
| ! | CGCGAGCCAGGTTAGCTACC+GGG | + | chr7_4:63043244-63043263 | Msa1169940:intron | 65.0% |
| ! | GCGAGCCAGGTTAGCTACCG+GGG | + | chr7_4:63043245-63043264 | Msa1169940:intron | 65.0% |
| ! | GCCAGGTTAGCTACCGGGGT+TGG | + | chr7_4:63043249-63043268 | Msa1169940:intron | 65.0% |
| GCCAACCCCGGTAGCTAACC+TGG | - | chr7_4:63043253-63043272 | None:intergenic | 65.0% | |
| GTGTGTGTGTGTGGGTGGGC+GGG | + | chr7_4:63044108-63044127 | Msa1169940:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 63041575 | 63044908 | 63041575 | ID=Msa1169940;Name=Msa1169940 |
| chr7_4 | mRNA | 63041575 | 63044908 | 63041575 | ID=Msa1169940-mRNA-1;Parent=Msa1169940;Name=Msa1169940-mRNA-1;_AED=0.07;_eAED=0.07;_QI=72|0|0.66|0.66|1|1|3|220|291 |
| chr7_4 | exon | 63041575 | 63042296 | 63041575 | ID=Msa1169940-mRNA-1:exon:20070;Parent=Msa1169940-mRNA-1 |
| chr7_4 | exon | 63043947 | 63044113 | 63043947 | ID=Msa1169940-mRNA-1:exon:20071;Parent=Msa1169940-mRNA-1 |
| chr7_4 | exon | 63044630 | 63044908 | 63044630 | ID=Msa1169940-mRNA-1:exon:20072;Parent=Msa1169940-mRNA-1 |
| chr7_4 | five_prime_UTR | 63041575 | 63041646 | 63041575 | ID=Msa1169940-mRNA-1:five_prime_utr;Parent=Msa1169940-mRNA-1 |
| chr7_4 | CDS | 63041647 | 63042296 | 63041647 | ID=Msa1169940-mRNA-1:cds;Parent=Msa1169940-mRNA-1 |
| chr7_4 | CDS | 63043947 | 63044113 | 63043947 | ID=Msa1169940-mRNA-1:cds;Parent=Msa1169940-mRNA-1 |
| chr7_4 | CDS | 63044630 | 63044688 | 63044630 | ID=Msa1169940-mRNA-1:cds;Parent=Msa1169940-mRNA-1 |
| chr7_4 | three_prime_UTR | 63044689 | 63044908 | 63044689 | ID=Msa1169940-mRNA-1:three_prime_utr;Parent=Msa1169940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
