Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1434120 | XP_003625511.1 | 86.996 | 223 | 21 | 4 | 1 | 218 | 1 | 220 | 2.82e-116 | 343 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1434120 | G7L0L4 | 86.996 | 223 | 21 | 4 | 1 | 218 | 1 | 220 | 1.35e-116 | 343 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1356150 | Msa1434120 | 0.873267 | 1.678402e-67 | -8.615850e-47 |
| Msa1385750 | Msa1434120 | 0.995324 | 3.838211e-215 | -8.615850e-47 |
| Msa1409220 | Msa1434120 | 0.992361 | 7.830269e-193 | -8.615850e-47 |
| Msa0648620 | Msa1434120 | 0.817033 | 4.067938e-52 | -8.615850e-47 |
| Msa0648670 | Msa1434120 | 0.821869 | 3.209878e-53 | -8.615850e-47 |
| Msa1123800 | Msa1434120 | 0.913595 | 5.130789e-84 | -8.615850e-47 |
| Msa1169940 | Msa1434120 | 0.991893 | 3.960856e-190 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1434120 | MtrunA17_Chr7g0263051 | 86.996 | 223 | 21 | 4 | 1 | 218 | 1 | 220 | 2.59e-120 | 343 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1434120 | AT3G53630.2 | 42.857 | 245 | 115 | 8 | 12 | 253 | 3 | 225 | 3.00e-48 | 160 |
| Msa1434120 | AT3G53630.1 | 46.569 | 204 | 94 | 6 | 12 | 214 | 3 | 192 | 3.36e-47 | 157 |
Find 96 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGATGCAATCTTAATTT+TGG | 0.074580 | tig0027465:-46235 | None:intergenic |
| GATTGACCATAACCTCAATT+TGG | 0.202384 | tig0027465:+45550 | Msa1434120:CDS |
| TGGGATTTGCACTGTGAAAA+TGG | 0.222632 | tig0027465:-46215 | None:intergenic |
| ACTCCAACTGGTTGTGAATA+AGG | 0.268058 | tig0027465:-43623 | None:intergenic |
| GAATCTTCGTTGTTGATGTT+TGG | 0.305644 | tig0027465:-43146 | None:intergenic |
| AACAATGGACCAGTATAAAA+AGG | 0.309171 | tig0027465:-46381 | None:intergenic |
| CATTGAAATTTCAAGTTTGA+TGG | 0.324699 | tig0027465:+46132 | Msa1434120:CDS |
| AATCTTCGTTGTTGATGTTT+GGG | 0.328350 | tig0027465:-43145 | None:intergenic |
| GTAACTGCTTCACCGGAATT+CGG | 0.343202 | tig0027465:-43437 | None:intergenic |
| CTGTCGTCATTGACGTTGTC+TGG | 0.355101 | tig0027465:-43239 | None:intergenic |
| TAGAACCCAAATTGAGGTTA+TGG | 0.365006 | tig0027465:-45556 | None:intergenic |
| TGTGAATTGTGAAATGGAAA+TGG | 0.366177 | tig0027465:-43063 | None:intergenic |
| TGGCTGACGTTGAAGGCAAT+TGG | 0.369030 | tig0027465:-45515 | None:intergenic |
| CGGTGAAGCAGTTACGATTC+GGG | 0.372928 | tig0027465:+43445 | Msa1434120:CDS |
| ATTGACCATAACCTCAATTT+GGG | 0.373255 | tig0027465:+45551 | Msa1434120:CDS |
| ATTCTCGAGGTGGGTGGTTG+TGG | 0.374448 | tig0027465:-43174 | None:intergenic |
| GATACGCTGAAGCCGAATTC+CGG | 0.405492 | tig0027465:+43425 | Msa1434120:CDS |
| AATAACTCATTATCTTTGCT+TGG | 0.411400 | tig0027465:+46342 | Msa1434120:three_prime_UTR |
| CCGGTGAAGCAGTTACGATT+CGG | 0.415694 | tig0027465:+43444 | Msa1434120:CDS |
| TACTCGAAACCTTGATGAAA+AGG | 0.423065 | tig0027465:+43201 | Msa1434120:CDS |
| GTGAATTGTGAAATGGAAAT+GGG | 0.424607 | tig0027465:-43062 | None:intergenic |
| AATAATCTTTGCTTCTCAAA+GGG | 0.425067 | tig0027465:-46189 | None:intergenic |
| TCTTCATCTCCAACTCCAAC+TGG | 0.432362 | tig0027465:-43635 | None:intergenic |
| TTTCGCCTGAGTATATTTAT+GGG | 0.433268 | tig0027465:+43567 | Msa1434120:CDS |
| GGAATGGCATGGGCATATCA+TGG | 0.438655 | tig0027465:+43523 | Msa1434120:CDS |
| GGCTGACGTTGAAGGCAATT+GGG | 0.439791 | tig0027465:-45514 | None:intergenic |
| CTTTAAAATCATACTTGTAA+AGG | 0.444260 | tig0027465:+46270 | Msa1434120:three_prime_UTR |
| TTGCTTTCTGCCCGACCTCC+TGG | 0.447681 | tig0027465:-43340 | None:intergenic |
| GTGAAATGAAAGAGATATGC+AGG | 0.447964 | tig0027465:-43090 | None:intergenic |
| GCCCGACCTCCTGGTAAGTA+CGG | 0.449996 | tig0027465:-43331 | None:intergenic |
| AAGCTGATTGTCAGTGGAGA+AGG | 0.455681 | tig0027465:+43401 | Msa1434120:CDS |
| CATCATCATCGGAGCCGAAA+AGG | 0.460905 | tig0027465:-43292 | None:intergenic |
| CCCGTACTTACCAGGAGGTC+GGG | 0.461045 | tig0027465:+43330 | Msa1434120:CDS |
| GGGAGTATGTTGTGTGGGAA+TGG | 0.467402 | tig0027465:+43507 | Msa1434120:CDS |
| TGTTGTCAGCAAGGGTTTGA+AGG | 0.470639 | tig0027465:+43679 | Msa1434120:CDS |
| CGGGAGAGTAGTATTTGTGT+TGG | 0.470805 | tig0027465:+43464 | Msa1434120:CDS |
| GAATGGCATGGGCATATCAT+GGG | 0.474822 | tig0027465:+43524 | Msa1434120:CDS |
| CGCGAAGAGTCGAGAGTCGA+AGG | 0.475861 | tig0027465:+43368 | Msa1434120:CDS |
| GGGAGAGTAGTATTTGTGTT+GGG | 0.478013 | tig0027465:+43465 | Msa1434120:CDS |
| GGGATTTGCACTGTGAAAAT+GGG | 0.479435 | tig0027465:-46214 | None:intergenic |
| ATGGGGTATAATGATGATCA+TGG | 0.480640 | tig0027465:+43542 | Msa1434120:CDS |
| GGTCAATCCTGGTAGACAAC+TGG | 0.486687 | tig0027465:-45535 | None:intergenic |
| AAATAATCTTTGCTTCTCAA+AGG | 0.489359 | tig0027465:-46190 | None:intergenic |
| AGACAACTGGCTGACGTTGA+AGG | 0.491469 | tig0027465:-45522 | None:intergenic |
| ACGTCAGCCAGTTGTCTACC+AGG | 0.493612 | tig0027465:+45528 | Msa1434120:CDS |
| ATTGAAATTTCAAGTTTGAT+GGG | 0.493745 | tig0027465:+46133 | Msa1434120:CDS |
| TATTCACAACCAGTTGGAGT+TGG | 0.500442 | tig0027465:+43626 | Msa1434120:CDS |
| CGACGCTCCCCGTACTTACC+AGG | 0.500920 | tig0027465:+43322 | Msa1434120:CDS |
| ATACTGATGCTGCTCCTGCT+AGG | 0.512955 | tig0027465:+43720 | Msa1434120:CDS |
| AACCAAATTGTTGACCTTGG+AGG | 0.515992 | tig0027465:-43776 | None:intergenic |
| CTTCATCGCAGTCTCAATGC+TGG | 0.528653 | tig0027465:+43746 | Msa1434120:CDS |
| CTGCGATGAAGAATCCTAGC+AGG | 0.528957 | tig0027465:-43734 | None:intergenic |
| GATGTTTGGGAGGGAAGTCA+TGG | 0.529266 | tig0027465:-43132 | None:intergenic |
| CCCCGTACTTACCAGGAGGT+CGG | 0.536020 | tig0027465:+43329 | Msa1434120:CDS |
| AGCTGATTGTCAGTGGAGAA+GGG | 0.540667 | tig0027465:+43402 | Msa1434120:CDS |
| CCGAATCGTAACTGCTTCAC+CGG | 0.541881 | tig0027465:-43444 | None:intergenic |
| ATTGAGGTTATGGTCAATCC+TGG | 0.543767 | tig0027465:-45546 | None:intergenic |
| ATGCTGGTTCTGCTCCTCCA+AGG | 0.545858 | tig0027465:+43762 | Msa1434120:CDS |
| CTTCGTTGTTGATGTTTGGG+AGG | 0.546139 | tig0027465:-43142 | None:intergenic |
| CTCAAAGGGGATGAAAATGA+TGG | 0.547136 | tig0027465:-46175 | None:intergenic |
| GTCGTCTTCGTCATCATCAT+CGG | 0.554571 | tig0027465:-43303 | None:intergenic |
| TAGTTGTAGAACCCAAATTG+AGG | 0.555399 | tig0027465:-45562 | None:intergenic |
| CTCGAGGTGGGTGGTTGTGG+AGG | 0.556596 | tig0027465:-43171 | None:intergenic |
| TATGTTGTGTGGGAATGGCA+TGG | 0.562974 | tig0027465:+43512 | Msa1434120:CDS |
| GGAAGGGGAGTATGTTGTGT+GGG | 0.567393 | tig0027465:+43502 | Msa1434120:CDS |
| GTGTCATGACGATGAGGAAG+GGG | 0.570208 | tig0027465:+43487 | Msa1434120:CDS |
| TTCGTTGTTGATGTTTGGGA+GGG | 0.579691 | tig0027465:-43141 | None:intergenic |
| AATTGGGAGAGCATCCCTCT+CGG | 0.583194 | tig0027465:-45498 | None:intergenic |
| CGTCCTTATTCACAACCAGT+TGG | 0.586989 | tig0027465:+43620 | Msa1434120:CDS |
| TGTGAATAAGGACGCTCCGA+AGG | 0.588363 | tig0027465:-43611 | None:intergenic |
| GCGAAGAGTCGAGAGTCGAA+GGG | 0.589719 | tig0027465:+43369 | Msa1434120:CDS |
| CGAGTAAGAGATTCTCGAGG+TGG | 0.590939 | tig0027465:-43184 | None:intergenic |
| GGGTGTCATGACGATGAGGA+AGG | 0.592367 | tig0027465:+43485 | Msa1434120:CDS |
| GTTTGATGGGTTGCAAGCAG+AGG | 0.599701 | tig0027465:+46146 | Msa1434120:CDS |
| TGGGGTATAATGATGATCAT+GGG | 0.601518 | tig0027465:+43543 | Msa1434120:CDS |
| CATGAACTGCATGGCCGAGA+GGG | 0.603779 | tig0027465:+45484 | Msa1434120:CDS |
| GCTGATTGTCAGTGGAGAAG+GGG | 0.605349 | tig0027465:+43403 | Msa1434120:CDS |
| TAATTCCCATAAATATACTC+AGG | 0.608602 | tig0027465:-43572 | None:intergenic |
| ATTATCAAGCTGATTGTCAG+TGG | 0.609061 | tig0027465:+43395 | Msa1434120:CDS |
| ATAATCTTTGCTTCTCAAAG+GGG | 0.611929 | tig0027465:-46188 | None:intergenic |
| ATGTTGTGTGGGAATGGCAT+GGG | 0.613843 | tig0027465:+43513 | Msa1434120:CDS |
| GGTGTCATGACGATGAGGAA+GGG | 0.614911 | tig0027465:+43486 | Msa1434120:CDS |
| AATGGCATGGGCATATCATG+GGG | 0.631702 | tig0027465:+43525 | Msa1434120:CDS |
| AGGAAGGGGAGTATGTTGTG+TGG | 0.641212 | tig0027465:+43501 | Msa1434120:CDS |
| GCCGAAAAGGAAATCCTCGA+AGG | 0.646398 | tig0027465:-43279 | None:intergenic |
| CGAAGAGTCGAGAGTCGAAG+GGG | 0.646968 | tig0027465:+43370 | Msa1434120:CDS |
| TGAAGCTGATGTTGTCAGCA+AGG | 0.660229 | tig0027465:+43670 | Msa1434120:CDS |
| TAAGAGATTCTCGAGGTGGG+TGG | 0.661338 | tig0027465:-43180 | None:intergenic |
| GAGTAAGAGATTCTCGAGGT+GGG | 0.663187 | tig0027465:-43183 | None:intergenic |
| GAAGCTGATGTTGTCAGCAA+GGG | 0.664378 | tig0027465:+43671 | Msa1434120:CDS |
| AAATTTGTGCATGAACTGCA+TGG | 0.671265 | tig0027465:+45475 | Msa1434120:CDS |
| TGAAATGAAAGAGATATGCA+GGG | 0.672780 | tig0027465:-43089 | None:intergenic |
| CGCTCCCCGTACTTACCAGG+AGG | 0.697086 | tig0027465:+43325 | Msa1434120:CDS |
| TGTTGGGTGTCATGACGATG+AGG | 0.711770 | tig0027465:+43481 | Msa1434120:CDS |
| GCATGAACTGCATGGCCGAG+AGG | 0.734910 | tig0027465:+45483 | Msa1434120:CDS |
| TTTCGAGTAAGAGATTCTCG+AGG | 0.744371 | tig0027465:-43187 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAATTTTATTCCTT+TGG | + | tig0027465:43813-43832 | Msa1434120:intron | 10.0% |
| !!! | TTATGGTTTAAAATACAATT+TGG | + | tig0027465:44357-44376 | Msa1434120:intron | 15.0% |
| !!! | TATGGTTTAAAATACAATTT+GGG | + | tig0027465:44358-44377 | Msa1434120:intron | 15.0% |
| !!! | TTTTGGTAATTTAATGAATT+CGG | + | tig0027465:44482-44501 | Msa1434120:intron | 15.0% |
| !!! | AGTATTTTAAACCATATTTA+GGG | - | tig0027465:45158-45177 | None:intergenic | 15.0% |
| !!! | TAGTATTTTAAACCATATTT+AGG | - | tig0027465:45159-45178 | None:intergenic | 15.0% |
| !!! | AATATGGTTTAAAATACTAT+TGG | + | tig0027465:45160-45179 | Msa1434120:intron | 15.0% |
| !! | TAAGGTTGTTAAATGAATAT+CGG | - | tig0027465:44395-44414 | None:intergenic | 20.0% |
| !! | AATCACTCTAGTTATTAAAT+GGG | + | tig0027465:44934-44953 | Msa1434120:intron | 20.0% |
| !!! | TAATTTAACTTCCCTAAATA+TGG | + | tig0027465:45144-45163 | Msa1434120:intron | 20.0% |
| !!! | TTTTGGTAATTTAACGAATT+CGG | + | tig0027465:45289-45308 | Msa1434120:intron | 20.0% |
| !!! | TGAGCTTTAATTAAACAAAA+AGG | - | tig0027465:45736-45755 | None:intergenic | 20.0% |
| !! | TTGTTTAATTAAAGCTCAAA+TGG | + | tig0027465:45738-45757 | Msa1434120:intron | 20.0% |
| !! | TGTTTAATTAAAGCTCAAAT+GGG | + | tig0027465:45739-45758 | Msa1434120:intron | 20.0% |
| !!! | TAAAAGCACAAAAAGATTAT+AGG | - | tig0027465:45913-45932 | None:intergenic | 20.0% |
| !!! | ATCTTTTATGTTTTGATGTT+TGG | + | tig0027465:46059-46078 | Msa1434120:intron | 20.0% |
| !!! | ATTGAAATTTCAAGTTTGAT+GGG | + | tig0027465:46133-46152 | Msa1434120:CDS | 20.0% |
| !!! | CTTTAAAATCATACTTGTAA+AGG | + | tig0027465:46270-46289 | Msa1434120:three_prime_UTR | 20.0% |
| !!! | GAGACATGATTTTTTATTTT+TGG | + | tig0027465:46297-46316 | Msa1434120:three_prime_UTR | 20.0% |
| ! | TAATTCCCATAAATATACTC+AGG | - | tig0027465:43575-43594 | None:intergenic | 25.0% |
| !! | TTTATGGGAATTATTTTCAG+AGG | + | tig0027465:43582-43601 | Msa1434120:CDS | 25.0% |
| ! | ACAACAAAAAATCAAACCAA+AGG | - | tig0027465:43832-43851 | None:intergenic | 25.0% |
| !! | GTGAATTTTGTTAGATTGTT+TGG | + | tig0027465:43861-43880 | Msa1434120:intron | 25.0% |
| !! | AATTTTGTTAGATTGTTTGG+TGG | + | tig0027465:43864-43883 | Msa1434120:intron | 25.0% |
| !! | ATTTTGTTAGATTGTTTGGT+GGG | + | tig0027465:43865-43884 | Msa1434120:intron | 25.0% |
| !! | TGGATTTAAAGTTATTGATC+CGG | + | tig0027465:44158-44177 | Msa1434120:intron | 25.0% |
| !!! | TATTTTAACTTCTCCAAATG+TGG | + | tig0027465:44333-44352 | Msa1434120:intron | 25.0% |
| ! | TTTAAACCATAAACCACATT+TGG | - | tig0027465:44349-44368 | None:intergenic | 25.0% |
| ! | ATTCAAAACACAATCTTGAT+AGG | - | tig0027465:44567-44586 | None:intergenic | 25.0% |
| ! | AATTAGCAAATTGAAACCAT+TGG | - | tig0027465:44630-44649 | None:intergenic | 25.0% |
| ! | CTAAAATGATAGGTACAATT+GGG | + | tig0027465:44844-44863 | Msa1434120:intron | 25.0% |
| !! | TTTGTTATCTACATCAAATG+AGG | - | tig0027465:44908-44927 | None:intergenic | 25.0% |
| ! | CAATCACTCTAGTTATTAAA+TGG | + | tig0027465:44933-44952 | Msa1434120:intron | 25.0% |
| !!! | GGATGTGTTGATTTTTATTA+TGG | + | tig0027465:45045-45064 | Msa1434120:intron | 25.0% |
| ! | TCTAAAAATGTGATTCTTGT+CGG | + | tig0027465:45256-45275 | Msa1434120:intron | 25.0% |
| ! | ACATAAAAGATTCATTTCAG+TGG | - | tig0027465:46050-46069 | None:intergenic | 25.0% |
| !!! | CATTGAAATTTCAAGTTTGA+TGG | + | tig0027465:46132-46151 | Msa1434120:CDS | 25.0% |
| ! | AATAATCTTTGCTTCTCAAA+GGG | - | tig0027465:46192-46211 | None:intergenic | 25.0% |
| ! | AAATAATCTTTGCTTCTCAA+AGG | - | tig0027465:46193-46212 | None:intergenic | 25.0% |
| !! | ACAGATGCAATCTTAATTTT+GGG | - | tig0027465:46237-46256 | None:intergenic | 25.0% |
| !! | AACAGATGCAATCTTAATTT+TGG | - | tig0027465:46238-46257 | None:intergenic | 25.0% |
| ! | AGTTATTAAAAAACCATGTC+TGG | - | tig0027465:46329-46348 | None:intergenic | 25.0% |
| ! | AATAACTCATTATCTTTGCT+TGG | + | tig0027465:46342-46361 | Msa1434120:three_prime_UTR | 25.0% |
| GTGAATTGTGAAATGGAAAT+GGG | - | tig0027465:43065-43084 | None:intergenic | 30.0% | |
| TGTGAATTGTGAAATGGAAA+TGG | - | tig0027465:43066-43085 | None:intergenic | 30.0% | |
| TGAAATGAAAGAGATATGCA+GGG | - | tig0027465:43092-43111 | None:intergenic | 30.0% | |
| AATCTTCGTTGTTGATGTTT+GGG | - | tig0027465:43148-43167 | None:intergenic | 30.0% | |
| ! | AAGTTGAATCCTTTTCATCA+AGG | - | tig0027465:43213-43232 | None:intergenic | 30.0% |
| ! | TTTTCGCCTGAGTATATTTA+TGG | + | tig0027465:43566-43585 | Msa1434120:CDS | 30.0% |
| TTTCGCCTGAGTATATTTAT+GGG | + | tig0027465:43567-43586 | Msa1434120:CDS | 30.0% | |
| AAAAACCAAATTGTTGACCT+TGG | - | tig0027465:43782-43801 | None:intergenic | 30.0% | |
| TGTAGATGAATTTAGCTGTT+AGG | + | tig0027465:43976-43995 | Msa1434120:intron | 30.0% | |
| TTGAGCTATTAGATGAAGAT+TGG | + | tig0027465:44138-44157 | Msa1434120:intron | 30.0% | |
| CATTAAATTACCAAAACCCA+TGG | - | tig0027465:44478-44497 | None:intergenic | 30.0% | |
| !! | TCAAGATTGTGTTTTGAATC+TGG | + | tig0027465:44568-44587 | Msa1434120:intron | 30.0% |
| ! | GTTTAGGATGCTAAAATGAT+AGG | + | tig0027465:44834-44853 | Msa1434120:intron | 30.0% |
| GCTAAAATGATAGGTACAAT+TGG | + | tig0027465:44843-44862 | Msa1434120:intron | 30.0% | |
| AACACAATAACAACATGGTT+TGG | - | tig0027465:45085-45104 | None:intergenic | 30.0% | |
| CATTGAACACAATAACAACA+TGG | - | tig0027465:45090-45109 | None:intergenic | 30.0% | |
| ! | CATGTTGTTATTGTGTTCAA+TGG | + | tig0027465:45088-45107 | Msa1434120:intron | 30.0% |
| CGTTAAATTACCAAAATCCA+TGG | - | tig0027465:45285-45304 | None:intergenic | 30.0% | |
| AATCTTGATATGTGAGACAT+AGG | - | tig0027465:45362-45381 | None:intergenic | 30.0% | |
| !! | TCAAGATTGTGTTTTGAATC+TGG | + | tig0027465:44568-44587 | Msa1434120:intron | 30.0% |
| ATTGACCATAACCTCAATTT+GGG | + | tig0027465:45551-45570 | Msa1434120:CDS | 30.0% | |
| TAATTTCCGATGATGTAACA+GGG | - | tig0027465:45681-45700 | None:intergenic | 30.0% | |
| ATAATTTCCGATGATGTAAC+AGG | - | tig0027465:45682-45701 | None:intergenic | 30.0% | |
| ATAATCTTTGCTTCTCAAAG+GGG | - | tig0027465:46191-46210 | None:intergenic | 30.0% | |
| !! | GGGTTTTGTGAATTGTGAAA+TGG | - | tig0027465:43072-43091 | None:intergenic | 35.0% |
| GTGAAATGAAAGAGATATGC+AGG | - | tig0027465:43093-43112 | None:intergenic | 35.0% | |
| GAATCTTCGTTGTTGATGTT+TGG | - | tig0027465:43149-43168 | None:intergenic | 35.0% | |
| TACTCGAAACCTTGATGAAA+AGG | + | tig0027465:43201-43220 | Msa1434120:CDS | 35.0% | |
| ! | GAAATCCTCGAAGGATTTTT+GGG | - | tig0027465:43273-43292 | None:intergenic | 35.0% |
| ATTATCAAGCTGATTGTCAG+TGG | + | tig0027465:43395-43414 | Msa1434120:CDS | 35.0% | |
| ATGGGGTATAATGATGATCA+TGG | + | tig0027465:43542-43561 | Msa1434120:CDS | 35.0% | |
| TGGGGTATAATGATGATCAT+GGG | + | tig0027465:43543-43562 | Msa1434120:CDS | 35.0% | |
| GAATTTAGCTGTTAGGAAGT+TGG | + | tig0027465:43983-44002 | Msa1434120:intron | 35.0% | |
| ! | GAAGTTGGATTTTCTGTTCT+GGG | + | tig0027465:43998-44017 | Msa1434120:intron | 35.0% |
| ! | GTTCTGGGTTTAAGATGTTT+AGG | + | tig0027465:44013-44032 | Msa1434120:intron | 35.0% |
| ! | GTTTAAGATGTTTAGGTGGT+AGG | + | tig0027465:44020-44039 | Msa1434120:intron | 35.0% |
| GTAGATAATAAATGACGACG+CGG | + | tig0027465:44097-44116 | Msa1434120:intron | 35.0% | |
| CCATGAAGTCTCTATCAAAT+TGG | - | tig0027465:44200-44219 | None:intergenic | 35.0% | |
| CCAATTTGATAGAGACTTCA+TGG | + | tig0027465:44197-44216 | Msa1434120:intron | 35.0% | |
| TTGATAGAGACTTCATGGAA+CGG | + | tig0027465:44202-44221 | Msa1434120:intron | 35.0% | |
| CATTGAACACAACAACAACA+GGG | - | tig0027465:44275-44294 | None:intergenic | 35.0% | |
| !! | GTTCAATGGATTGATGTTGT+TGG | + | tig0027465:44287-44306 | Msa1434120:intron | 35.0% |
| ACTTCTCCAAATGTGGTTTA+TGG | + | tig0027465:44340-44359 | Msa1434120:intron | 35.0% | |
| AGTCACAACTTAAGTAGTTG+CGG | - | tig0027465:44421-44440 | None:intergenic | 35.0% | |
| TTGAATCTGGTTGCTGATAT+TGG | + | tig0027465:44581-44600 | Msa1434120:intron | 35.0% | |
| GTCAATATGTCTTCATCCAA+TGG | + | tig0027465:44611-44630 | Msa1434120:intron | 35.0% | |
| !!! | AGAACCAAATTTTGAGGTCA+TGG | - | tig0027465:44761-44780 | None:intergenic | 35.0% |
| ! | GTTGCTAGAACCAAATTTTG+AGG | - | tig0027465:44767-44786 | None:intergenic | 35.0% |
| GGATGAAGTTTGGATCAAAT+TGG | - | tig0027465:45016-45035 | None:intergenic | 35.0% | |
| CTGATCTTCATCTAATGACA+TGG | - | tig0027465:45116-45135 | None:intergenic | 35.0% | |
| TAGGGAAGTTAAATTACGAG+TGG | - | tig0027465:45140-45159 | None:intergenic | 35.0% | |
| CTAGGTTATTGGATGAAGAT+CGG | - | tig0027465:45198-45217 | None:intergenic | 35.0% | |
| AAATTTGTGCATGAACTGCA+TGG | + | tig0027465:45475-45494 | Msa1434120:CDS | 35.0% | |
| GATTGACCATAACCTCAATT+TGG | + | tig0027465:45550-45569 | Msa1434120:CDS | 35.0% | |
| TAGAACCCAAATTGAGGTTA+TGG | - | tig0027465:45559-45578 | None:intergenic | 35.0% | |
| TAGTTGTAGAACCCAAATTG+AGG | - | tig0027465:45565-45584 | None:intergenic | 35.0% | |
| AGTTTATTTGTGTGTGTGTG+TGG | + | tig0027465:45585-45604 | Msa1434120:intron | 35.0% | |
| GTTTATTTGTGTGTGTGTGT+GGG | + | tig0027465:45586-45605 | Msa1434120:intron | 35.0% | |
| CGGAAATTATGTACTTGTGT+TGG | + | tig0027465:45692-45711 | Msa1434120:intron | 35.0% | |
| GTTGGTTGCTATGGTTAATT+TGG | + | tig0027465:45710-45729 | Msa1434120:intron | 35.0% | |
| ATTTCTTACATGTGTAGCTC+TGG | - | tig0027465:45785-45804 | None:intergenic | 35.0% | |
| AGCTACACATGTAAGAAATG+TGG | + | tig0027465:45786-45805 | Msa1434120:intron | 35.0% | |
| TAAATGATCTGTTAGCAGTG+CGG | - | tig0027465:45853-45872 | None:intergenic | 35.0% | |
| !!! | GAAATGTTTTGTTTTCCCTG+TGG | + | tig0027465:45955-45974 | Msa1434120:intron | 35.0% |
| ! | TTCTTAGCATTTTTGTCACC+TGG | + | tig0027465:46000-46019 | Msa1434120:intron | 35.0% |
| TGCACTTAATGCAATAAACC+AGG | - | tig0027465:46021-46040 | None:intergenic | 35.0% | |
| ACTTCTATGCTGAAATTGAC+AGG | + | tig0027465:46094-46113 | Msa1434120:intron | 35.0% | |
| ! | TTTTTGGATACAACCAGACA+TGG | + | tig0027465:46313-46332 | Msa1434120:three_prime_UTR | 35.0% |
| TTCGTTGTTGATGTTTGGGA+GGG | - | tig0027465:43144-43163 | None:intergenic | 40.0% | |
| ! | TTTCGAGTAAGAGATTCTCG+AGG | - | tig0027465:43190-43209 | None:intergenic | 40.0% |
| ! | GGAAATCCTCGAAGGATTTT+TGG | - | tig0027465:43274-43293 | None:intergenic | 40.0% |
| ! | TCCTTCGAGGATTTCCTTTT+CGG | + | tig0027465:43278-43297 | Msa1434120:CDS | 40.0% |
| GGGAGAGTAGTATTTGTGTT+GGG | + | tig0027465:43465-43484 | Msa1434120:CDS | 40.0% | |
| ACTCCAACTGGTTGTGAATA+AGG | - | tig0027465:43626-43645 | None:intergenic | 40.0% | |
| TATTCACAACCAGTTGGAGT+TGG | + | tig0027465:43626-43645 | Msa1434120:CDS | 40.0% | |
| AACCAAATTGTTGACCTTGG+AGG | - | tig0027465:43779-43798 | None:intergenic | 40.0% | |
| ! | GGAAGTTGGATTTTCTGTTC+TGG | + | tig0027465:43997-44016 | Msa1434120:intron | 40.0% |
| ! | CTGGGTTTAAGATGTTTAGG+TGG | + | tig0027465:44016-44035 | Msa1434120:intron | 40.0% |
| TTTAGGTGGTAGGCACAAAT+AGG | + | tig0027465:44030-44049 | Msa1434120:intron | 40.0% | |
| TTAGGTGGTAGGCACAAATA+GGG | + | tig0027465:44031-44050 | Msa1434120:intron | 40.0% | |
| TACATCAAATGAGCTTCCCT+AGG | - | tig0027465:44080-44099 | None:intergenic | 40.0% | |
| CTCTATCAAATTGGAGCCAT+TGG | - | tig0027465:44191-44210 | None:intergenic | 40.0% | |
| AACACAACAACAACAGGGTT+TGG | - | tig0027465:44270-44289 | None:intergenic | 40.0% | |
| CCATTGAACACAACAACAAC+AGG | - | tig0027465:44276-44295 | None:intergenic | 40.0% | |
| ! | CCTGTTGTTGTTGTGTTCAA+TGG | + | tig0027465:44273-44292 | Msa1434120:intron | 40.0% |
| CTTAAGTAGTTGCGGATCTA+AGG | - | tig0027465:44413-44432 | None:intergenic | 40.0% | |
| TCCAAAGTCGTGATTCTTGT+CGG | + | tig0027465:44449-44468 | Msa1434120:intron | 40.0% | |
| TGATTCTTGTCGGAAACCAT+GGG | + | tig0027465:44459-44478 | Msa1434120:intron | 40.0% | |
| TTGATCATAGTCGCTTCAGT+TGG | + | tig0027465:44522-44541 | Msa1434120:intron | 40.0% | |
| TTGGCCATGACCTCAAAATT+TGG | + | tig0027465:44754-44773 | Msa1434120:intron | 40.0% | |
| TGTGGATGAATTTGGCTGTT+AGG | + | tig0027465:44797-44816 | Msa1434120:intron | 40.0% | |
| GAATTTGGCTGTTAGGAAGT+TGG | + | tig0027465:44804-44823 | Msa1434120:intron | 40.0% | |
| GGAAGTTGGATCACATGTTT+AGG | + | tig0027465:44818-44837 | Msa1434120:intron | 40.0% | |
| GGGAGCTATTTGATGAAGAT+TGG | + | tig0027465:44954-44973 | Msa1434120:intron | 40.0% | |
| TTGGATCAAATTGGAACCAC+TGG | - | tig0027465:45007-45026 | None:intergenic | 40.0% | |
| TTGATCCAAACTTCATCCGA+CGG | + | tig0027465:45018-45037 | Msa1434120:intron | 40.0% | |
| CACAGCTACTGAAATTGTGA+CGG | + | tig0027465:45226-45245 | Msa1434120:intron | 40.0% | |
| ! | TTGTCGGAAACCATGGATTT+TGG | + | tig0027465:45272-45291 | Msa1434120:intron | 40.0% |
| ATTGAGGTTATGGTCAATCC+TGG | - | tig0027465:45549-45568 | None:intergenic | 40.0% | |
| ! | TTTTGAGCTTATGTGTTGCG+TGG | + | tig0027465:45645-45664 | Msa1434120:intron | 40.0% |
| !! | TGTACTTGTGTTGGTTGCTA+TGG | + | tig0027465:45701-45720 | Msa1434120:intron | 40.0% |
| !!! | ATGTTTTGTTTTCCCTGTGG+TGG | + | tig0027465:45958-45977 | Msa1434120:intron | 40.0% |
| CTCAAAGGGGATGAAAATGA+TGG | - | tig0027465:46178-46197 | None:intergenic | 40.0% | |
| GGGATTTGCACTGTGAAAAT+GGG | - | tig0027465:46217-46236 | None:intergenic | 40.0% | |
| TGGGATTTGCACTGTGAAAA+TGG | - | tig0027465:46218-46237 | None:intergenic | 40.0% | |
| CTTCGTTGTTGATGTTTGGG+AGG | - | tig0027465:43145-43164 | None:intergenic | 45.0% | |
| GAGTAAGAGATTCTCGAGGT+GGG | - | tig0027465:43186-43205 | None:intergenic | 45.0% | |
| !! | CCTCGAAGGATTTTTGGGAA+GGG | - | tig0027465:43268-43287 | None:intergenic | 45.0% |
| !! | TCCTCGAAGGATTTTTGGGA+AGG | - | tig0027465:43269-43288 | None:intergenic | 45.0% |
| GTCGTCTTCGTCATCATCAT+CGG | - | tig0027465:43306-43325 | None:intergenic | 45.0% | |
| AAGCTGATTGTCAGTGGAGA+AGG | + | tig0027465:43401-43420 | Msa1434120:CDS | 45.0% | |
| AGCTGATTGTCAGTGGAGAA+GGG | + | tig0027465:43402-43421 | Msa1434120:CDS | 45.0% | |
| GTAACTGCTTCACCGGAATT+CGG | - | tig0027465:43440-43459 | None:intergenic | 45.0% | |
| CGGGAGAGTAGTATTTGTGT+TGG | + | tig0027465:43464-43483 | Msa1434120:CDS | 45.0% | |
| TATGTTGTGTGGGAATGGCA+TGG | + | tig0027465:43512-43531 | Msa1434120:CDS | 45.0% | |
| ATGTTGTGTGGGAATGGCAT+GGG | + | tig0027465:43513-43532 | Msa1434120:CDS | 45.0% | |
| GAATGGCATGGGCATATCAT+GGG | + | tig0027465:43524-43543 | Msa1434120:CDS | 45.0% | |
| AATGGCATGGGCATATCATG+GGG | + | tig0027465:43525-43544 | Msa1434120:CDS | 45.0% | |
| ! | TTTTCAGAGGACTGTGCCTT+CGG | + | tig0027465:43595-43614 | Msa1434120:CDS | 45.0% |
| CGTCCTTATTCACAACCAGT+TGG | + | tig0027465:43620-43639 | Msa1434120:CDS | 45.0% | |
| TCTTCATCTCCAACTCCAAC+TGG | - | tig0027465:43638-43657 | None:intergenic | 45.0% | |
| TGAAGCTGATGTTGTCAGCA+AGG | + | tig0027465:43670-43689 | Msa1434120:CDS | 45.0% | |
| GAAGCTGATGTTGTCAGCAA+GGG | + | tig0027465:43671-43690 | Msa1434120:CDS | 45.0% | |
| TGTTGTCAGCAAGGGTTTGA+AGG | + | tig0027465:43679-43698 | Msa1434120:CDS | 45.0% | |
| CTCCTCCAAGGTCAACAATT+TGG | + | tig0027465:43774-43793 | Msa1434120:intron | 45.0% | |
| GGTAGGCACAAATAGGGTTT+CGG | + | tig0027465:44037-44056 | Msa1434120:intron | 45.0% | |
| TTGATCCGGTCTTCATCCAA+TGG | + | tig0027465:44172-44191 | Msa1434120:intron | 45.0% | |
| TCCGACAAGAATCACGACTT+TGG | - | tig0027465:44453-44472 | None:intergenic | 45.0% | |
| GTGATTCTTGTCGGAAACCA+TGG | + | tig0027465:44458-44477 | Msa1434120:intron | 45.0% | |
| ! | TTGTCGGAAACCATGGGTTT+TGG | + | tig0027465:44465-44484 | Msa1434120:intron | 45.0% |
| CCTGAACTGCATAACTGAGA+GGG | + | tig0027465:44685-44704 | Msa1434120:intron | 45.0% | |
| TCCTTCGCTGTGGATGAATT+TGG | + | tig0027465:44789-44808 | Msa1434120:intron | 45.0% | |
| CCGAGATAACAACCTGGTTT+GGG | - | tig0027465:44881-44900 | None:intergenic | 45.0% | |
| CCCAAACCAGGTTGTTATCT+CGG | + | tig0027465:44878-44897 | Msa1434120:intron | 45.0% | |
| CCAAACCAGGTTGTTATCTC+GGG | + | tig0027465:44879-44898 | Msa1434120:intron | 45.0% | |
| CAAACCAGGTTGTTATCTCG+GGG | + | tig0027465:44880-44899 | Msa1434120:intron | 45.0% | |
| ATCAACACATCCACTACCGT+CGG | - | tig0027465:45037-45056 | None:intergenic | 45.0% | |
| GTGTCGTGGATCTAGGTTAT+TGG | - | tig0027465:45209-45228 | None:intergenic | 45.0% | |
| CAATTTCAGTAGCTGTGTCG+TGG | - | tig0027465:45223-45242 | None:intergenic | 45.0% | |
| GTGATTCTTGTCGGAAACCA+TGG | + | tig0027465:44458-44477 | Msa1434120:intron | 45.0% | |
| CCAACTGAAGTGACTGTGAT+TGG | - | tig0027465:45331-45350 | None:intergenic | 45.0% | |
| CCAATCACAGTCACTTCAGT+TGG | + | tig0027465:45328-45347 | Msa1434120:intron | 45.0% | |
| TATTTGTGTGTGTGTGTGGG+TGG | + | tig0027465:45589-45608 | Msa1434120:intron | 45.0% | |
| ATTTGTGTGTGTGTGTGGGT+GGG | + | tig0027465:45590-45609 | Msa1434120:intron | 45.0% | |
| CCAACACCCTGTTACATCAT+CGG | + | tig0027465:45672-45691 | Msa1434120:intron | 45.0% | |
| AAAGCTCAAATGGGCGATGA+AGG | + | tig0027465:45748-45767 | Msa1434120:intron | 45.0% | |
| TAAGTTGTCTTGCCACCACA+GGG | - | tig0027465:45973-45992 | None:intergenic | 45.0% | |
| GATGTTTGGGAGGGAAGTCA+TGG | - | tig0027465:43135-43154 | None:intergenic | 50.0% | |
| TAAGAGATTCTCGAGGTGGG+TGG | - | tig0027465:43183-43202 | None:intergenic | 50.0% | |
| CGAGTAAGAGATTCTCGAGG+TGG | - | tig0027465:43187-43206 | None:intergenic | 50.0% | |
| CTGTCGTCATTGACGTTGTC+TGG | - | tig0027465:43242-43261 | None:intergenic | 50.0% | |
| CCCTTCCCAAAAATCCTTCG+AGG | + | tig0027465:43265-43284 | Msa1434120:CDS | 50.0% | |
| GCCGAAAAGGAAATCCTCGA+AGG | - | tig0027465:43282-43301 | None:intergenic | 50.0% | |
| CATCATCATCGGAGCCGAAA+AGG | - | tig0027465:43295-43314 | None:intergenic | 50.0% | |
| GCTGATTGTCAGTGGAGAAG+GGG | + | tig0027465:43403-43422 | Msa1434120:CDS | 50.0% | |
| GATACGCTGAAGCCGAATTC+CGG | + | tig0027465:43425-43444 | Msa1434120:CDS | 50.0% | |
| CCGAATCGTAACTGCTTCAC+CGG | - | tig0027465:43447-43466 | None:intergenic | 50.0% | |
| CCGGTGAAGCAGTTACGATT+CGG | + | tig0027465:43444-43463 | Msa1434120:CDS | 50.0% | |
| CGGTGAAGCAGTTACGATTC+GGG | + | tig0027465:43445-43464 | Msa1434120:CDS | 50.0% | |
| ! | TGTTGGGTGTCATGACGATG+AGG | + | tig0027465:43481-43500 | Msa1434120:CDS | 50.0% |
| ! | GGTGTCATGACGATGAGGAA+GGG | + | tig0027465:43486-43505 | Msa1434120:CDS | 50.0% |
| GTGTCATGACGATGAGGAAG+GGG | + | tig0027465:43487-43506 | Msa1434120:CDS | 50.0% | |
| ! | AGGAAGGGGAGTATGTTGTG+TGG | + | tig0027465:43501-43520 | Msa1434120:CDS | 50.0% |
| ! | GGAAGGGGAGTATGTTGTGT+GGG | + | tig0027465:43502-43521 | Msa1434120:CDS | 50.0% |
| ! | GGGAGTATGTTGTGTGGGAA+TGG | + | tig0027465:43507-43526 | Msa1434120:CDS | 50.0% |
| GGAATGGCATGGGCATATCA+TGG | + | tig0027465:43523-43542 | Msa1434120:CDS | 50.0% | |
| TGTGAATAAGGACGCTCCGA+AGG | - | tig0027465:43614-43633 | None:intergenic | 50.0% | |
| ATACTGATGCTGCTCCTGCT+AGG | + | tig0027465:43720-43739 | Msa1434120:CDS | 50.0% | |
| CTGCGATGAAGAATCCTAGC+AGG | - | tig0027465:43737-43756 | None:intergenic | 50.0% | |
| CTTCATCGCAGTCTCAATGC+TGG | + | tig0027465:43746-43765 | Msa1434120:CDS | 50.0% | |
| AATAGGGTTTCGGAACACCC+TGG | + | tig0027465:44047-44066 | Msa1434120:intron | 50.0% | |
| AACACCCTGGTTGTGATCCT+AGG | + | tig0027465:44060-44079 | Msa1434120:intron | 50.0% | |
| ACACCCTGGTTGTGATCCTA+GGG | + | tig0027465:44061-44080 | Msa1434120:intron | 50.0% | |
| CTTCCCTAGGATCACAACCA+GGG | - | tig0027465:44067-44086 | None:intergenic | 50.0% | |
| TGGAGCCATTGGATGAAGAC+CGG | - | tig0027465:44180-44199 | None:intergenic | 50.0% | |
| GCCTGAACTGCATAACTGAG+AGG | + | tig0027465:44684-44703 | Msa1434120:intron | 50.0% | |
| CCCTCTCAGTTATGCAGTTC+AGG | - | tig0027465:44688-44707 | None:intergenic | 50.0% | |
| CTAGCAACTTTCCTTCGCTG+TGG | + | tig0027465:44779-44798 | Msa1434120:intron | 50.0% | |
| GCCAAATTCATCCACAGCGA+AGG | - | tig0027465:44793-44812 | None:intergenic | 50.0% | |
| !! | AACAACCTGGTTTGGGCGTT+CGG | - | tig0027465:44874-44893 | None:intergenic | 50.0% |
| CCCGAGATAACAACCTGGTT+TGG | - | tig0027465:44882-44901 | None:intergenic | 50.0% | |
| TTGATCCGATCGTCATCCAG+TGG | + | tig0027465:44988-45007 | Msa1434120:intron | 50.0% | |
| TGGAACCACTGGATGACGAT+CGG | - | tig0027465:44996-45015 | None:intergenic | 50.0% | |
| CACTACCGTCGGATGAAGTT+TGG | - | tig0027465:45026-45045 | None:intergenic | 50.0% | |
| CAAACTTCATCCGACGGTAG+TGG | + | tig0027465:45024-45043 | Msa1434120:intron | 50.0% | |
| AGTAGCTGTGTCGTGGATCT+AGG | - | tig0027465:45216-45235 | None:intergenic | 50.0% | |
| !! | AATTGGGAGAGCATCCCTCT+CGG | - | tig0027465:45501-45520 | None:intergenic | 50.0% |
| GGCTGACGTTGAAGGCAATT+GGG | - | tig0027465:45517-45536 | None:intergenic | 50.0% | |
| TGGCTGACGTTGAAGGCAAT+TGG | - | tig0027465:45518-45537 | None:intergenic | 50.0% | |
| AGACAACTGGCTGACGTTGA+AGG | - | tig0027465:45525-45544 | None:intergenic | 50.0% | |
| GGTCAATCCTGGTAGACAAC+TGG | - | tig0027465:45538-45557 | None:intergenic | 50.0% | |
| CCGATGATGTAACAGGGTGT+TGG | - | tig0027465:45675-45694 | None:intergenic | 50.0% | |
| CTAAGTTGTCTTGCCACCAC+AGG | - | tig0027465:45974-45993 | None:intergenic | 50.0% | |
| !! | GTTTGATGGGTTGCAAGCAG+AGG | + | tig0027465:46146-46165 | Msa1434120:CDS | 50.0% |
| ATTCTCGAGGTGGGTGGTTG+TGG | - | tig0027465:43177-43196 | None:intergenic | 55.0% | |
| GCGAAGAGTCGAGAGTCGAA+GGG | + | tig0027465:43369-43388 | Msa1434120:CDS | 55.0% | |
| CGAAGAGTCGAGAGTCGAAG+GGG | + | tig0027465:43370-43389 | Msa1434120:CDS | 55.0% | |
| ! | GGGTGTCATGACGATGAGGA+AGG | + | tig0027465:43485-43504 | Msa1434120:CDS | 55.0% |
| !! | ATGCTGGTTCTGCTCCTCCA+AGG | + | tig0027465:43762-43781 | Msa1434120:CDS | 55.0% |
| GCTTCCCTAGGATCACAACC+AGG | - | tig0027465:44068-44087 | None:intergenic | 55.0% | |
| ! | TTTGAGGTCATGGCCAACCC+CGG | - | tig0027465:44751-44770 | None:intergenic | 55.0% |
| !! | ACAACCTGGTTTGGGCGTTC+GGG | - | tig0027465:44873-44892 | None:intergenic | 55.0% |
| GGTTCCCCGAGATAACAACC+TGG | - | tig0027465:44887-44906 | None:intergenic | 55.0% | |
| CATGAACTGCATGGCCGAGA+GGG | + | tig0027465:45484-45503 | Msa1434120:CDS | 55.0% | |
| ACGTCAGCCAGTTGTCTACC+AGG | + | tig0027465:45528-45547 | Msa1434120:CDS | 55.0% | |
| CCGACCTCCTGGTAAGTACG+GGG | - | tig0027465:43332-43351 | None:intergenic | 60.0% | |
| CCCCGTACTTACCAGGAGGT+CGG | + | tig0027465:43329-43348 | Msa1434120:CDS | 60.0% | |
| CCCGACCTCCTGGTAAGTAC+GGG | - | tig0027465:43333-43352 | None:intergenic | 60.0% | |
| CCCGTACTTACCAGGAGGTC+GGG | + | tig0027465:43330-43349 | Msa1434120:CDS | 60.0% | |
| GCCCGACCTCCTGGTAAGTA+CGG | - | tig0027465:43334-43353 | None:intergenic | 60.0% | |
| TTGCTTTCTGCCCGACCTCC+TGG | - | tig0027465:43343-43362 | None:intergenic | 60.0% | |
| CGCGAAGAGTCGAGAGTCGA+AGG | + | tig0027465:43368-43387 | Msa1434120:CDS | 60.0% | |
| GGCTCGCGTGGAAGGTCATT+GGG | - | tig0027465:44718-44737 | None:intergenic | 60.0% | |
| TGGCTCGCGTGGAAGGTCAT+TGG | - | tig0027465:44719-44738 | None:intergenic | 60.0% | |
| AATGACCTTCCACGCGAGCC+AGG | + | tig0027465:44718-44737 | Msa1434120:intron | 60.0% | |
| ! | ACGCGAGCCAGGTTAGCTAC+CGG | + | tig0027465:44729-44748 | Msa1434120:intron | 60.0% |
| GATTCCCGAACGCCCAAACC+AGG | + | tig0027465:44866-44885 | Msa1434120:intron | 60.0% | |
| GCATGAACTGCATGGCCGAG+AGG | + | tig0027465:45483-45502 | Msa1434120:CDS | 60.0% | |
| TGTGTGTGTGTGTGGGTGGG+CGG | + | tig0027465:45593-45612 | Msa1434120:intron | 60.0% | |
| CTCGAGGTGGGTGGTTGTGG+AGG | - | tig0027465:43174-43193 | None:intergenic | 65.0% | |
| CGACGCTCCCCGTACTTACC+AGG | + | tig0027465:43322-43341 | Msa1434120:CDS | 65.0% | |
| CGCTCCCCGTACTTACCAGG+AGG | + | tig0027465:43325-43344 | Msa1434120:CDS | 65.0% | |
| ! | GCTAACCTGGCTCGCGTGGA+AGG | - | tig0027465:44726-44745 | None:intergenic | 65.0% |
| ! | GGTAGCTAACCTGGCTCGCG+TGG | - | tig0027465:44730-44749 | None:intergenic | 65.0% |
| ! | CGCGAGCCAGGTTAGCTACC+GGG | + | tig0027465:44730-44749 | Msa1434120:intron | 65.0% |
| ! | GCGAGCCAGGTTAGCTACCG+GGG | + | tig0027465:44731-44750 | Msa1434120:intron | 65.0% |
| ! | GCCAGGTTAGCTACCGGGGT+TGG | + | tig0027465:44735-44754 | Msa1434120:intron | 65.0% |
| GCCAACCCCGGTAGCTAACC+TGG | - | tig0027465:44739-44758 | None:intergenic | 65.0% | |
| GTGTGTGTGTGTGGGTGGGC+GGG | + | tig0027465:45594-45613 | Msa1434120:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027465 | gene | 43062 | 46394 | 43062 | ID=Msa1434120;Name=Msa1434120 |
| tig0027465 | mRNA | 43062 | 46394 | 43062 | ID=Msa1434120-mRNA-1;Parent=Msa1434120;Name=Msa1434120-mRNA-1;_AED=0.07;_eAED=0.07;_QI=72|0|0.66|0.66|1|1|3|220|291 |
| tig0027465 | exon | 43062 | 43783 | 43062 | ID=Msa1434120-mRNA-1:exon:8950;Parent=Msa1434120-mRNA-1 |
| tig0027465 | exon | 45433 | 45599 | 45433 | ID=Msa1434120-mRNA-1:exon:8951;Parent=Msa1434120-mRNA-1 |
| tig0027465 | exon | 46116 | 46394 | 46116 | ID=Msa1434120-mRNA-1:exon:8952;Parent=Msa1434120-mRNA-1 |
| tig0027465 | five_prime_UTR | 43062 | 43133 | 43062 | ID=Msa1434120-mRNA-1:five_prime_utr;Parent=Msa1434120-mRNA-1 |
| tig0027465 | CDS | 43134 | 43783 | 43134 | ID=Msa1434120-mRNA-1:cds;Parent=Msa1434120-mRNA-1 |
| tig0027465 | CDS | 45433 | 45599 | 45433 | ID=Msa1434120-mRNA-1:cds;Parent=Msa1434120-mRNA-1 |
| tig0027465 | CDS | 46116 | 46174 | 46116 | ID=Msa1434120-mRNA-1:cds;Parent=Msa1434120-mRNA-1 |
| tig0027465 | three_prime_UTR | 46175 | 46394 | 46175 | ID=Msa1434120-mRNA-1:three_prime_utr;Parent=Msa1434120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
