AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1133950


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1133950 MtrunA17_Chr7g0214101 99.723 361 1 0 1 361 1 361 0.0 737
Msa1133950 MtrunA17_Chr8g0376411 39.665 358 205 2 2 352 51 404 1.51e-88 272
Msa1133950 MtrunA17_Chr3g0116801 41.104 326 188 1 27 352 82 403 2.74e-88 271
Msa1133950 MtrunA17_Chr4g0009631 34.925 335 202 6 23 348 33 360 6.29e-64 207
Msa1133950 MtrunA17_Chr7g0216531 75.000 100 16 2 158 248 12 111 3.46e-41 140
Msa1133950 MtrunA17_Chr7g0216531 57.143 56 24 0 84 139 2 57 2.87e-12 62.8
Msa1133950 MtrunA17_Chr7g0216541 95.122 41 2 0 160 200 6 46 1.46e-21 86.7
Msa1133950 MtrunA17_Chr3g0138171 27.468 233 142 8 66 290 421 634 3.01e-11 64.7
Msa1133950 MtrunA17_Chr8g0367181 26.587 252 167 8 69 317 427 663 3.94e-11 64.3
Msa1133950 MtrunA17_Chr8g0367201 26.587 252 167 8 69 317 427 663 4.00e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1133950 AT5G50850.1 86.188 362 42 2 1 354 1 362 0.0 639
Msa1133950 AT1G30120.1 40.456 351 202 2 5 352 60 406 2.23e-90 277
Msa1133950 AT2G34590.1 42.042 333 185 2 22 352 80 406 2.05e-89 275
Msa1133950 AT1G55510.1 36.337 344 210 5 8 348 10 347 6.63e-70 223
Msa1133950 AT3G13450.1 35.224 335 210 4 15 348 25 353 1.64e-68 219
Msa1133950 AT4G15560.1 24.727 275 187 7 19 290 390 647 3.40e-12 68.2
Msa1133950 AT3G21500.3 26.549 226 151 6 68 290 392 605 3.19e-11 65.1
Msa1133950 AT3G21500.1 26.549 226 151 6 68 290 391 604 3.68e-11 65.1
Msa1133950 AT3G21500.2 26.549 226 151 6 68 290 392 605 4.14e-11 64.7

Find 129 sgRNAs with CRISPR-Local

Find 532 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACAAAGGTTATTAATTTA+AGG 0.162693 7_4:+262035 Msa1133950:intron
TTTATAATTCCCAGCATATC+TGG 0.227146 7_4:+262655 Msa1133950:three_prime_UTR
TCATGTCTTGGTTAGTTCTT+TGG 0.228149 7_4:+262468 Msa1133950:three_prime_UTR
AATATGCAGGCTGGGTTTAC+TGG 0.232671 7_4:+259161 Msa1133950:intron
ATGCCCTGGGTTGAAAGTTT+TGG 0.247026 7_4:+261185 Msa1133950:CDS
AGAACTAGATCGATTAATTT+AGG 0.262380 7_4:-262437 None:intergenic
GTTTACTTAAAGCTGCTATA+AGG 0.289090 7_4:+261235 Msa1133950:CDS
TCTTGGTATGGCTCATGCCC+TGG 0.309803 7_4:+261171 Msa1133950:CDS
TCACCCATCAAGAAGACTTT+AGG 0.312229 7_4:-255641 None:intergenic
AAATGTGTAGGATAATAATT+TGG 0.314166 7_4:-254868 None:intergenic
TTAGATTTCCAAGGGACTAT+TGG 0.314457 7_4:+257518 Msa1133950:intron
AAGTTGGCCTTTGCAGTTTC+CGG 0.316568 7_4:-262821 None:intergenic
GGAGTTGGTGCTGCTTACTA+TGG 0.330288 7_4:+259188 Msa1133950:CDS
CATGCCTTATGCAGCAAATC+TGG 0.332687 7_4:+262240 Msa1133950:CDS
TCAAGAACTTCGGCAGAAAC+AGG 0.334442 7_4:-261423 None:intergenic
CAGAAAAGAATAATGAATTC+TGG 0.338933 7_4:+254949 Msa1133950:five_prime_UTR
GAAGACTGAAAATTAAATTC+TGG 0.349384 7_4:+262907 Msa1133950:three_prime_UTR
AATGGTTGGCTTTGCTCTAA+AGG 0.349744 7_4:+261630 Msa1133950:CDS
TCATTGATTCTGTCAGGCTT+TGG 0.355325 7_4:+262561 Msa1133950:three_prime_UTR
TCAAGGAAAACTACAGGATC+AGG 0.356678 7_4:-261261 None:intergenic
CTTTCCAGATTTGCTGCATA+AGG 0.357769 7_4:-262244 None:intergenic
CAGGCTGGGTTTACTGGGAT+TGG 0.358479 7_4:+259167 Msa1133950:intron
TAATTTGTTTGCATTGCGTT+TGG 0.365019 7_4:+262930 Msa1133950:three_prime_UTR
TCCGATGGGAAGGCAGAAAC+TGG 0.372273 7_4:-261448 None:intergenic
TCTCTCTTCTTCCGCTAAAC+AGG 0.373627 7_4:+255482 Msa1133950:CDS
AATGTACCTATTGTATTTAG+AGG 0.374366 7_4:+260947 Msa1133950:CDS
GCACCGGTGGAGAGAATTGC+CGG 0.381050 7_4:+262205 Msa1133950:CDS
GGGTTTACTGGGATTGGAGT+TGG 0.388394 7_4:+259173 Msa1133950:CDS
AAGGAATCAATCAAGATGTT+AGG 0.392916 7_4:+255318 Msa1133950:exon
CGAGCATCTTCAGATGAATA+TGG 0.394225 7_4:-261210 None:intergenic
TAAGATCAAATCGACGTGAT+AGG 0.407286 7_4:-263052 None:intergenic
TGCAGCAAATCTGGAAAGAT+TGG 0.409248 7_4:+262249 Msa1133950:CDS
TTATGCAGTGTTATGCATCT+TGG 0.410920 7_4:+261154 Msa1133950:intron
AATGGTGCTGCTGCTGGTGT+TGG 0.415359 7_4:+260974 Msa1133950:CDS
TCAGAGTTGGTGAGTATCAA+TGG 0.422592 7_4:-255034 None:intergenic
AATTTGTTTGCATTGCGTTT+GGG 0.423865 7_4:+262931 Msa1133950:three_prime_UTR
TCTGTCATCGAGGAGAGTTT+TGG 0.424908 7_4:+262172 Msa1133950:CDS
TTTCCTGACAGAAGCATTGA+TGG 0.431540 7_4:-262083 None:intergenic
AAATCAAATTACATGTCTGC+TGG 0.434500 7_4:+260917 Msa1133950:CDS
TTTACTTAAAGCTGCTATAA+GGG 0.435542 7_4:+261236 Msa1133950:CDS
GAACATCCTCCCAGATATGC+TGG 0.451781 7_4:-262665 None:intergenic
TTGGGTCCTCTAAATACAAT+AGG 0.453035 7_4:-260953 None:intergenic
CGATCCTAAAGTCTTCTTGA+TGG 0.454138 7_4:+255637 Msa1133950:CDS
TCTCAGAAGCAGGCTTATAC+CGG 0.458262 7_4:-262976 None:intergenic
GGACCCAATGGTGCTGCTGC+TGG 0.458395 7_4:+260968 Msa1133950:CDS
TTCAACTGTCACCAGTCTGT+TGG 0.461416 7_4:-262107 None:intergenic
CTTGGTATGGCTCATGCCCT+GGG 0.468165 7_4:+261172 Msa1133950:CDS
TTGAATTGTGGCTGTTATCC+CGG 0.472385 7_4:+262957 Msa1133950:three_prime_UTR
AGGTTGTGGTGGAAATTTGA+GGG 0.475922 7_4:-262518 None:intergenic
AATGTCATAAACTCCACAAC+AGG 0.479865 7_4:-259218 None:intergenic
GAAAGTGTGAAAAGGCAGAT+TGG 0.484065 7_4:+263075 Msa1133950:three_prime_UTR
AAGGGACTATTGGAGAAGTA+TGG 0.485928 7_4:+257528 Msa1133950:CDS
ATATGCAGGCTGGGTTTACT+GGG 0.487916 7_4:+259162 Msa1133950:intron
CAGATTTGCTGCATAAGGCA+TGG 0.501282 7_4:-262239 None:intergenic
GAGATGTCTGAATGCGGAAA+AGG 0.501518 7_4:-255463 None:intergenic
GACATTTAACTTCTCCATGC+AGG 0.502562 7_4:+259235 Msa1133950:CDS
CAGTGTTATGCATCTTGGTA+TGG 0.510583 7_4:+261159 Msa1133950:intron
ACACCAGCAGCAGCACCATT+GGG 0.513248 7_4:-260971 None:intergenic
GCCCCGGCAATTCTCTCCAC+CGG 0.513647 7_4:-262208 None:intergenic
CCACCATCAATGCTTCTGTC+AGG 0.514146 7_4:+262080 Msa1133950:CDS
ATGCCACAGATCTGTGCCTA+TGG 0.514735 7_4:+262405 Msa1133950:CDS
CTTAACAGATTGAGAGAGAA+GGG 0.517313 7_4:+261578 Msa1133950:intron
TGATCTTAGAAAGTGTGAAA+AGG 0.521086 7_4:+263067 Msa1133950:three_prime_UTR
ATTTAGGCAGTTGCAGCCAT+AGG 0.522619 7_4:-262421 None:intergenic
TTATAATTCCCAGCATATCT+GGG 0.527240 7_4:+262656 Msa1133950:three_prime_UTR
AACACCAGCAGCAGCACCAT+TGG 0.529263 7_4:-260972 None:intergenic
TCCTTCAATTTAGATTTCCA+AGG 0.535088 7_4:+257509 Msa1133950:intron
GGAGTGTCGAGAACCCTCTC+AGG 0.535813 7_4:-257552 None:intergenic
CAAGATATATTTAACTGTGT+GGG 0.539303 7_4:+262872 Msa1133950:three_prime_UTR
AGATTTGCTGCATAAGGCAT+GGG 0.544500 7_4:-262238 None:intergenic
ATACTTCTCCAATAGTCCCT+TGG 0.545557 7_4:-257526 None:intergenic
TCCAGTTTCTGCCTTCCCAT+CGG 0.546005 7_4:+261447 Msa1133950:CDS
GGGTTTCCTCAGCATGGTGT+TGG 0.548315 7_4:+262133 Msa1133950:CDS
TTATAGGTTGGAGAATATCA+AGG 0.548317 7_4:+257383 Msa1133950:intron
AGAATATCAAGGTGCATACA+AGG 0.548665 7_4:+257394 Msa1133950:CDS
GGAAAGATTGGCTGTCCCAC+AGG 0.549518 7_4:+262261 Msa1133950:CDS
GATCCTAAAGTCTTCTTGAT+GGG 0.550617 7_4:+255638 Msa1133950:CDS
CAACAAACAAACCTGTTTAG+CGG 0.555702 7_4:-255493 None:intergenic
AGACTGGTGACAGTTGAAGA+AGG 0.558832 7_4:+262112 Msa1133950:CDS
ACAAGATATATTTAACTGTG+TGG 0.565114 7_4:+262871 Msa1133950:three_prime_UTR
GCTTAACAGATTGAGAGAGA+AGG 0.566225 7_4:+261577 Msa1133950:intron
AAAAGGATGCACTAAAGTAT+GGG 0.566640 7_4:-263001 None:intergenic
CCTTCAATTTAGATTTCCAA+GGG 0.567285 7_4:+257510 Msa1133950:intron
AATCAAATTACATGTCTGCT+GGG 0.569255 7_4:+260918 Msa1133950:CDS
GAGGTTGTGGTGGAAATTTG+AGG 0.570350 7_4:-262519 None:intergenic
AGTCTTCTTGATGGGTGAAG+AGG 0.572562 7_4:+255646 Msa1133950:CDS
CTATGGTCTAAAGCCTGTTG+TGG 0.572678 7_4:+259205 Msa1133950:CDS
GGAACGAAAAGTTTCAGAGT+TGG 0.575482 7_4:-255047 None:intergenic
AGTATGGGTATCTCAGAAGC+AGG 0.580296 7_4:-262986 None:intergenic
CTCAGAAGCAGGCTTATACC+GGG 0.584510 7_4:-262975 None:intergenic
AACATCCTCCCAGATATGCT+GGG 0.589448 7_4:-262664 None:intergenic
CAAGAACTTCGGCAGAAACA+GGG 0.590845 7_4:-261422 None:intergenic
GTAGAGGAATTCGAATACTT+AGG 0.593492 7_4:-254986 None:intergenic
GAAACTGGAATCAAGAACTT+CGG 0.593707 7_4:-261433 None:intergenic
GCGTTTGGGACTTTGAATTG+TGG 0.594726 7_4:+262945 Msa1133950:three_prime_UTR
GTTAGGTGTTATAAGAAACA+AGG 0.596856 7_4:+255335 Msa1133950:CDS
CCTGACAGAAGCATTGATGG+TGG 0.602274 7_4:-262080 None:intergenic
GTGCCAAAACTTTCAACCCA+GGG 0.603446 7_4:-261188 None:intergenic
CAAGGAAAACTACAGGATCA+GGG 0.604349 7_4:-261260 None:intergenic
GACTGGTGACAGTTGAAGAA+GGG 0.606152 7_4:+262113 Msa1133950:CDS
GAGATAAACACTAACCTGCA+TGG 0.607390 7_4:-259249 None:intergenic
TGTCAGGAAAACCAACAGAC+TGG 0.614276 7_4:+262096 Msa1133950:CDS
CAGCCATAGGCACAGATCTG+TGG 0.618473 7_4:-262408 None:intergenic
TAGCATACCGGAAACTGCAA+AGG 0.619213 7_4:+262814 Msa1133950:three_prime_UTR
AGGCATGGGAACATCAGCCC+CGG 0.619316 7_4:-262224 None:intergenic
GGAGAAGTATGGTCCTGAGA+GGG 0.619724 7_4:+257539 Msa1133950:CDS
ATTGTATTTAGAGGACCCAA+TGG 0.620504 7_4:+260956 Msa1133950:CDS
GAAGAAGGGTTTCCTCAGCA+TGG 0.620750 7_4:+262127 Msa1133950:CDS
ACTCAAAACAGCAAGCAAGT+TGG 0.621959 7_4:-262837 None:intergenic
GGTGCCAAAACTTTCAACCC+AGG 0.622618 7_4:-261189 None:intergenic
CATCAAGAAGACTTTAGGAT+CGG 0.623232 7_4:-255636 None:intergenic
CCTTCCCATCGGAAAAGCAA+AGG 0.627357 7_4:+261458 Msa1133950:CDS
GCTGAGACACTAGCAAAGGA+AGG 0.630656 7_4:+261913 Msa1133950:CDS
GGCTGCTGAGACACTAGCAA+AGG 0.630698 7_4:+261909 Msa1133950:intron
TTGATGGTGGCTCGATCAAG+CGG 0.636023 7_4:-262067 None:intergenic
TGGTGGCTCGATCAAGCGGT+CGG 0.637314 7_4:-262063 None:intergenic
CAAGAAGACTTTAGGATCGG+CGG 0.641433 7_4:-255633 None:intergenic
TGGCTATCTTGATGCACCGG+TGG 0.641507 7_4:+262192 Msa1133950:CDS
ACCGGTGGAGAGAATTGCCG+GGG 0.643645 7_4:+262207 Msa1133950:CDS
TATTCATCTGAAGATGCTCG+TGG 0.654209 7_4:+261213 Msa1133950:CDS
AAAGGAAGGAATCAGTGCTG+AGG 0.656553 7_4:+261927 Msa1133950:CDS
TGGAGAAGTATGGTCCTGAG+AGG 0.669482 7_4:+257538 Msa1133950:CDS
TGTCTGAATGCGGAAAAGGA+AGG 0.671745 7_4:-255459 None:intergenic
TGATAACAATGACACAAGAG+AGG 0.681703 7_4:+262705 Msa1133950:three_prime_UTR
TCAGCGCCAACACCATGCTG+AGG 0.686283 7_4:-262139 None:intergenic
AGAAGAGAGATGTCTGAATG+CGG 0.692625 7_4:-255469 None:intergenic
TAATTCCCAGCATATCTGGG+AGG 0.718916 7_4:+262659 Msa1133950:three_prime_UTR
AATCTGTGCATCTGTCATCG+AGG 0.746298 7_4:+262162 Msa1133950:CDS
TCTCGACACTCCCATCACTG+AGG 0.757157 7_4:+257563 Msa1133950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAATATTTA+TGG - chr7_4:255387-255406 None:intergenic 0.0%
!! AAAAAAATAGCAAAAATATT+CGG + chr7_4:254904-254923 Msa1133950:five_prime_UTR 10.0%
!!! AATATTTAGAATTTTTGTTA+TGG + chr7_4:256327-256346 Msa1133950:intron 10.0%
!!! AAAAGATTTTATGAATTTTA+AGG + chr7_4:258212-258231 Msa1133950:intron 10.0%
!!! TTTAAAGAATTTAAAATTCT+TGG + chr7_4:258823-258842 Msa1133950:intron 10.0%
!!! TTTTCTTATAAAAAATGTGT+AGG - chr7_4:254883-254902 None:intergenic 15.0%
!!! TTTTTTTCAATTAAGATTAG+AGG + chr7_4:255967-255986 Msa1133950:intron 15.0%
!!! TTTTTTCAATTAAGATTAGA+GGG + chr7_4:255968-255987 Msa1133950:intron 15.0%
!!! GTTATTACAATATTTTAGTT+AGG - chr7_4:256625-256644 None:intergenic 15.0%
!! TATGTTCATTTCAATATAAT+TGG + chr7_4:256893-256912 Msa1133950:intron 15.0%
!!! TCATTTTCTAATGTTTATTT+TGG + chr7_4:257350-257369 Msa1133950:intron 15.0%
!! TATAAAAATGTAAACATGAA+AGG - chr7_4:257674-257693 None:intergenic 15.0%
!!! AATTTGTTCATTTTATTAGA+TGG - chr7_4:257782-257801 None:intergenic 15.0%
!!! TTTACATCATAAGATTTTAA+AGG + chr7_4:258166-258185 Msa1133950:intron 15.0%
!!! TAAGATTTTAAAGGATTTTA+TGG + chr7_4:258175-258194 Msa1133950:intron 15.0%
!!! TTTAATAAATTAGATTTTGC+TGG - chr7_4:258573-258592 None:intergenic 15.0%
!!! TGTTTTAAATTTTGATATTC+AGG + chr7_4:260528-260547 Msa1133950:intron 15.0%
!!! TTATATATTTGAAGTAAAGT+CGG + chr7_4:261820-261839 Msa1133950:intron 15.0%
!!! AACTTTTTTTTACTTTGTTT+AGG + chr7_4:261888-261907 Msa1133950:intron 15.0%
!!! ATTATTTTTGGTAACATAAA+GGG - chr7_4:262497-262516 None:intergenic 15.0%
!!! AATTATTTTTGGTAACATAA+AGG - chr7_4:262498-262517 None:intergenic 15.0%
!! AAATGTGTAGGATAATAATT+TGG - chr7_4:254871-254890 None:intergenic 20.0%
!!! TTTTTCAATTAAGATTAGAG+GGG + chr7_4:255969-255988 Msa1133950:intron 20.0%
!! TAAGCTATAAGCTAAAAAAT+GGG + chr7_4:256139-256158 Msa1133950:intron 20.0%
!! AACAAAAAATCTGAAAATGT+TGG - chr7_4:256548-256567 None:intergenic 20.0%
!! TATTATATATGTCGGAATAT+AGG - chr7_4:256856-256875 None:intergenic 20.0%
!!! TTTTGGTTGTATTTGATTAT+AGG + chr7_4:257367-257386 Msa1133950:intron 20.0%
!! AAATGAACAAATTCAAACTT+TGG + chr7_4:257789-257808 Msa1133950:intron 20.0%
!!! GTATTGGATTAAGATTTTAA+AGG + chr7_4:258037-258056 Msa1133950:intron 20.0%
!!! TCAGATTTAAAAGATTTTGT+AGG + chr7_4:258082-258101 Msa1133950:intron 20.0%
!!! ATTTTCAATTTGGATTTCAA+TGG + chr7_4:258142-258161 Msa1133950:intron 20.0%
!!! TTTTTATGATAGATAAAGAG+AGG + chr7_4:258307-258326 Msa1133950:intron 20.0%
!!! TTTTATGATAGATAAAGAGA+GGG + chr7_4:258308-258327 Msa1133950:intron 20.0%
!! TTAATTATGAAAAAGTCTTG+TGG - chr7_4:258752-258771 None:intergenic 20.0%
!! ATTCCTGGTAAAAAAAAAAA+AGG + chr7_4:259083-259102 Msa1133950:intron 20.0%
!!! AATCCTTTTTTTTTTTTACC+AGG - chr7_4:259089-259108 None:intergenic 20.0%
!! ATAATGTTCATTAAATATGC+AGG + chr7_4:259148-259167 Msa1133950:intron 20.0%
!!! TGTGTTAATTTTACATCTTT+TGG + chr7_4:259308-259327 Msa1133950:intron 20.0%
!! TGTATAATCATCATAAATTC+AGG + chr7_4:259740-259759 Msa1133950:intron 20.0%
!! GCAACAATAAAATTAAACAA+TGG + chr7_4:260011-260030 Msa1133950:intron 20.0%
!! TAAAACAAATAGAATTGACA+AGG - chr7_4:260515-260534 None:intergenic 20.0%
!!! ATTGATAAAAATCGCTTTTA+GGG - chr7_4:260650-260669 None:intergenic 20.0%
!! TAAAATTAATTGTGTGAAGT+CGG + chr7_4:260741-260760 Msa1133950:intron 20.0%
!! AGATGACATAATGATAAAAT+GGG - chr7_4:260852-260871 None:intergenic 20.0%
!! AAGATGACATAATGATAAAA+TGG - chr7_4:260853-260872 None:intergenic 20.0%
!!! AAAAGAGGACTATAATTTTT+TGG + chr7_4:261786-261805 Msa1133950:intron 20.0%
!! CTTAAATTAATAACCTTTGT+GGG - chr7_4:262037-262056 None:intergenic 20.0%
!! TTTCTTAAATATCACTTCTA+AGG + chr7_4:262289-262308 Msa1133950:intron 20.0%
!!! AAATTTGAGGGAATTATTTT+TGG - chr7_4:262509-262528 None:intergenic 20.0%
! CAGAAAAGAATAATGAATTC+TGG + chr7_4:254949-254968 Msa1133950:five_prime_UTR 25.0%
! TGAAAAAAAAAACGAGAGAT+CGG - chr7_4:255139-255158 None:intergenic 25.0%
!! TGTTGAGATTTTTCTTTCTT+AGG + chr7_4:255248-255267 Msa1133950:intron 25.0%
!! ATCATTTTCAGAATCTTCTT+CGG + chr7_4:255436-255455 Msa1133950:intron 25.0%
! ATAAGTTATATCAGCCTTTA+CGG - chr7_4:255823-255842 None:intergenic 25.0%
!! ATTTTACCAAACACTACAAA+GGG - chr7_4:255883-255902 None:intergenic 25.0%
!! AATTTTACCAAACACTACAA+AGG - chr7_4:255884-255903 None:intergenic 25.0%
! GTAGTGTTTGGTAAAATTAA+CGG + chr7_4:255886-255905 Msa1133950:intron 25.0%
!!! CATTTTTTAGCTTATAGCTT+AGG - chr7_4:256140-256159 None:intergenic 25.0%
! CTAAGCTATAAGCTAAAAAA+TGG + chr7_4:256138-256157 Msa1133950:intron 25.0%
!! TGTTATGGTAATTTTGCAAA+TGG + chr7_4:256342-256361 Msa1133950:intron 25.0%
! TAATGTAACACAAAAGTCAA+AGG - chr7_4:256484-256503 None:intergenic 25.0%
!!! CAGTTAGTTTTACGAAAATA+GGG - chr7_4:256584-256603 None:intergenic 25.0%
!!! TCAGTTAGTTTTACGAAAAT+AGG - chr7_4:256585-256604 None:intergenic 25.0%
!! AGATTTTTCCTAATAGTAGT+AGG + chr7_4:256645-256664 Msa1133950:intron 25.0%
! TTCCGACATATATAATATGA+CGG + chr7_4:256859-256878 Msa1133950:intron 25.0%
!!! ATATGACCATTGACTTAATT+TGG + chr7_4:257122-257141 Msa1133950:intron 25.0%
! AATTCATGCATGTCTTTATA+CGG - chr7_4:257325-257344 None:intergenic 25.0%
! AAAATGTAAACATGAAAGGA+AGG - chr7_4:257670-257689 None:intergenic 25.0%
! CGAAAAATGTAACAAAAAGT+GGG - chr7_4:257979-257998 None:intergenic 25.0%
!!! CCACTTTTTGTTACATTTTT+CGG + chr7_4:257977-257996 Msa1133950:intron 25.0%
!! GTTAGTTTATTTCCATCTTA+GGG + chr7_4:258011-258030 Msa1133950:intron 25.0%
! TTAGTTTATTTCCATCTTAG+GGG + chr7_4:258012-258031 Msa1133950:intron 25.0%
!!! CATGATTTTAAAAGACTATC+AGG + chr7_4:258119-258138 Msa1133950:intron 25.0%
! TTTATGATAGATAAAGAGAG+GGG + chr7_4:258309-258328 Msa1133950:intron 25.0%
! ATGAAGACATAAGATTTCTT+GGG - chr7_4:258504-258523 None:intergenic 25.0%
! ATCACTTAAAAAAAGTCTCA+TGG - chr7_4:258627-258646 None:intergenic 25.0%
! GCAATTTAAAAAAAGTCTTG+TGG - chr7_4:258710-258729 None:intergenic 25.0%
! AGAAATTCACTAATAATTCC+TGG + chr7_4:259068-259087 Msa1133950:intron 25.0%
!!! AAAGTTTTTTCGTGAAAAGT+TGG + chr7_4:259395-259414 Msa1133950:intron 25.0%
! TAAGCAAACTAATCATCATT+TGG - chr7_4:259501-259520 None:intergenic 25.0%
!!! AAATGATGATTAGTTTGCTT+AGG + chr7_4:259500-259519 Msa1133950:intron 25.0%
! TTCTCGATATAAAATATTCG+AGG - chr7_4:259585-259604 None:intergenic 25.0%
!! AATCTGTAGTTTGTATCTTT+AGG - chr7_4:260252-260271 None:intergenic 25.0%
! ATCATCACCAATTAATTATG+TGG + chr7_4:260350-260369 Msa1133950:intron 25.0%
! CTAAACACCACATAATTAAT+TGG - chr7_4:260360-260379 None:intergenic 25.0%
! ATAAATCATCACCAATTATG+TGG + chr7_4:260405-260424 Msa1133950:intron 25.0%
! TAGGGTGTGATTATTAATAT+GGG - chr7_4:260632-260651 None:intergenic 25.0%
! TTAGGGTGTGATTATTAATA+TGG - chr7_4:260633-260652 None:intergenic 25.0%
!!! CATTGATAAAAATCGCTTTT+AGG - chr7_4:260651-260670 None:intergenic 25.0%
! AAAATTAATTGTGTGAAGTC+GGG + chr7_4:260742-260761 Msa1133950:intron 25.0%
! AAAATGGGATGAAATAGATA+GGG - chr7_4:260837-260856 None:intergenic 25.0%
! TAAAATGGGATGAAATAGAT+AGG - chr7_4:260838-260857 None:intergenic 25.0%
! AATGTACCTATTGTATTTAG+AGG + chr7_4:260947-260966 Msa1133950:CDS 25.0%
! TTTACTTAAAGCTGCTATAA+GGG + chr7_4:261236-261255 Msa1133950:CDS 25.0%
! TAAAAAATACAAGAAAGGAC+TGG - chr7_4:261511-261530 None:intergenic 25.0%
! GACACTAAAAAATACAAGAA+AGG - chr7_4:261516-261535 None:intergenic 25.0%
! TAGAATACAAAACGATCTTA+GGG - chr7_4:261664-261683 None:intergenic 25.0%
! AAACAATAACAGAAGAAAAG+AGG + chr7_4:261771-261790 Msa1133950:intron 25.0%
!!! ATGTTTTTTTTTACCCACAA+AGG + chr7_4:262021-262040 Msa1133950:intron 25.0%
! CCTTAAATTAATAACCTTTG+TGG - chr7_4:262038-262057 None:intergenic 25.0%
! CCACAAAGGTTATTAATTTA+AGG + chr7_4:262035-262054 Msa1133950:intron 25.0%
! ATTTAAGAAACATTACCTGT+GGG - chr7_4:262279-262298 None:intergenic 25.0%
! TATTTAAGAAACATTACCTG+TGG - chr7_4:262280-262299 None:intergenic 25.0%
! AGAACTAGATCGATTAATTT+AGG - chr7_4:262440-262459 None:intergenic 25.0%
!!! TTCTGAAATTTTTCATGTCT+TGG + chr7_4:262456-262475 Msa1133950:three_prime_UTR 25.0%
! ACAAGATATATTTAACTGTG+TGG + chr7_4:262871-262890 Msa1133950:three_prime_UTR 25.0%
! CAAGATATATTTAACTGTGT+GGG + chr7_4:262872-262891 Msa1133950:three_prime_UTR 25.0%
! GAAGACTGAAAATTAAATTC+TGG + chr7_4:262907-262926 Msa1133950:three_prime_UTR 25.0%
! AACGTAATTGTGTCTAAAAA+AGG - chr7_4:263021-263040 None:intergenic 25.0%
!!! TTTTTTAGACACAATTACGT+TGG + chr7_4:263020-263039 Msa1133950:three_prime_UTR 25.0%
AAGAGAAAATGAATCGAGAA+AGG - chr7_4:255090-255109 None:intergenic 30.0%
GATCGGAAAATGAAAAAACA+CGG - chr7_4:255122-255141 None:intergenic 30.0%
CACAAAAACACAGTGAAATT+AGG - chr7_4:255164-255183 None:intergenic 30.0%
TGTAGCAAAAAAAACCTAAG+TGG - chr7_4:255211-255230 None:intergenic 30.0%
! AATCTATTTTGCAGCAATCA+AGG + chr7_4:255299-255318 Msa1133950:intron 30.0%
AAGGAATCAATCAAGATGTT+AGG + chr7_4:255318-255337 Msa1133950:exon 30.0%
! GTTAGGTGTTATAAGAAACA+AGG + chr7_4:255335-255354 Msa1133950:CDS 30.0%
TCTGAAGATTACTTGTACTA+CGG - chr7_4:255701-255720 None:intergenic 30.0%
AAGTAATCTTCAGATTTCGT+AGG + chr7_4:255707-255726 Msa1133950:intron 30.0%
AGTAATCTTCAGATTTCGTA+GGG + chr7_4:255708-255727 Msa1133950:intron 30.0%
!! TTTCAAGTTTCATCCTTGAT+TGG + chr7_4:256201-256220 Msa1133950:intron 30.0%
TAATACTCCCATAGATTGTA+TGG + chr7_4:256252-256271 Msa1133950:intron 30.0%
CACTAAACCATACAATCTAT+GGG - chr7_4:256262-256281 None:intergenic 30.0%
TCACTAAACCATACAATCTA+TGG - chr7_4:256263-256282 None:intergenic 30.0%
GTCTGATATTTGATGAGATA+TGG - chr7_4:256446-256465 None:intergenic 30.0%
ACTATCTACCTACTACTATT+AGG - chr7_4:256656-256675 None:intergenic 30.0%
! GGTTAATAAAGTATCCTCAA+AGG - chr7_4:256776-256795 None:intergenic 30.0%
TCCGACATATATAATATGAC+GGG + chr7_4:256860-256879 Msa1133950:intron 30.0%
AAAGGACCAAATTAAGTCAA+TGG - chr7_4:257131-257150 None:intergenic 30.0%
AGATGAATTAAGCAAACGAA+AGG - chr7_4:257149-257168 None:intergenic 30.0%
!!! ATCTTTCAGTTTTAGAGTTG+AGG + chr7_4:257165-257184 Msa1133950:intron 30.0%
ATAAGCAAAGACATTGTAAG+GGG - chr7_4:257256-257275 None:intergenic 30.0%
CATAAGCAAAGACATTGTAA+GGG - chr7_4:257257-257276 None:intergenic 30.0%
TCATAAGCAAAGACATTGTA+AGG - chr7_4:257258-257277 None:intergenic 30.0%
! GTATACACTAAACCATTTTC+AGG - chr7_4:257303-257322 None:intergenic 30.0%
GGTTGTATTTGATTATAGGT+TGG + chr7_4:257371-257390 Msa1133950:intron 30.0%
! TTATAGGTTGGAGAATATCA+AGG + chr7_4:257383-257402 Msa1133950:intron 30.0%
AAGGAAATAACTTGAACAAG+TGG - chr7_4:257434-257453 None:intergenic 30.0%
TCCTTCAATTTAGATTTCCA+AGG + chr7_4:257509-257528 Msa1133950:intron 30.0%
CCTTCAATTTAGATTTCCAA+GGG + chr7_4:257510-257529 Msa1133950:intron 30.0%
AGAAAAATAACCTCAGTGAT+GGG - chr7_4:257576-257595 None:intergenic 30.0%
AAGAAAAATAACCTCAGTGA+TGG - chr7_4:257577-257596 None:intergenic 30.0%
!! ACTTTGGTAATGTAATGTGA+TGG + chr7_4:257805-257824 Msa1133950:intron 30.0%
CCGAAAAATGTAACAAAAAG+TGG - chr7_4:257980-257999 None:intergenic 30.0%
!! GGTTAGTTTATTTCCATCTT+AGG + chr7_4:258010-258029 Msa1133950:intron 30.0%
TAGTTTATTTCCATCTTAGG+GGG + chr7_4:258013-258032 Msa1133950:intron 30.0%
! GACTATCAGGATTTTCAATT+TGG + chr7_4:258132-258151 Msa1133950:intron 30.0%
CATGAAGACATAAGATTTCT+TGG - chr7_4:258505-258524 None:intergenic 30.0%
! TAGATTTTGCTGGATTTTGT+GGG - chr7_4:258563-258582 None:intergenic 30.0%
! TTAGATTTTGCTGGATTTTG+TGG - chr7_4:258564-258583 None:intergenic 30.0%
TGTGTTTGGATGATGTAATT+TGG + chr7_4:258796-258815 Msa1133950:intron 30.0%
TTATATTGCAGCTGTTTACA+TGG + chr7_4:259108-259127 Msa1133950:intron 30.0%
TTGCACACTGAATTTAAGAA+AGG - chr7_4:259283-259302 None:intergenic 30.0%
TATTCTTATCACACAGAAGA+CGG - chr7_4:259456-259475 None:intergenic 30.0%
CTAATCATCATTTGGAAACT+CGG - chr7_4:259493-259512 None:intergenic 30.0%
AAATTAGAAGGATAGTGATG+TGG + chr7_4:259841-259860 Msa1133950:intron 30.0%
! TTAAAGCATTTCTGTATGCA+TGG + chr7_4:260183-260202 Msa1133950:intron 30.0%
! TGTAGTTTGTATCTTTAGGA+GGG - chr7_4:260248-260267 None:intergenic 30.0%
AGATACAAACTACAGATTTG+TGG + chr7_4:260254-260273 Msa1133950:intron 30.0%
!!! TGGTTAGTTTTATAGTCACA+TGG + chr7_4:260432-260451 Msa1133950:intron 30.0%
!!! GTTTGTTGGTATTTTTTTGC+CGG + chr7_4:260480-260499 Msa1133950:intron 30.0%
ATTGACAAGGAATGATATTC+CGG - chr7_4:260502-260521 None:intergenic 30.0%
TTATTAATATGGGTATGCAC+AGG - chr7_4:260622-260641 None:intergenic 30.0%
AAATCAAATTACATGTCTGC+TGG + chr7_4:260917-260936 Msa1133950:CDS 30.0%
AATCAAATTACATGTCTGCT+GGG + chr7_4:260918-260937 Msa1133950:CDS 30.0%
GTTTCATAGAAGAAAATGTC+AGG - chr7_4:261026-261045 None:intergenic 30.0%
CATAACGAAAGAAAAACAGT+GGG - chr7_4:261074-261093 None:intergenic 30.0%
TCATAACGAAAGAAAAACAG+TGG - chr7_4:261075-261094 None:intergenic 30.0%
GTTTACTTAAAGCTGCTATA+AGG + chr7_4:261235-261254 Msa1133950:CDS 30.0%
!! TCATTTTCAAGGAAAACTAC+AGG - chr7_4:261270-261289 None:intergenic 30.0%
! CTTACAGTAACTCATTTTCA+AGG - chr7_4:261281-261300 None:intergenic 30.0%
TATTACAGCCTTCTCAAAAA+TGG + chr7_4:261612-261631 Msa1133950:CDS 30.0%
CTAGAATACAAAACGATCTT+AGG - chr7_4:261665-261684 None:intergenic 30.0%
! CTAAGATCGTTTTGTATTCT+AGG + chr7_4:261663-261682 Msa1133950:intron 30.0%
TTATTGCAAATGTGTTTGCT+TGG - chr7_4:261870-261889 None:intergenic 30.0%
!!! GTAAAACCACTTTTTGTATG+AGG - chr7_4:262541-262560 None:intergenic 30.0%
!!! TTTTACTCATTGATTCTGTC+AGG + chr7_4:262555-262574 Msa1133950:three_prime_UTR 30.0%
TTTATAATTCCCAGCATATC+TGG + chr7_4:262655-262674 Msa1133950:three_prime_UTR 30.0%
TTATAATTCCCAGCATATCT+GGG + chr7_4:262656-262675 Msa1133950:three_prime_UTR 30.0%
!! TCATTTTCTTTCTAGCATAC+CGG + chr7_4:262802-262821 Msa1133950:three_prime_UTR 30.0%
!! TAATTTGTTTGCATTGCGTT+TGG + chr7_4:262930-262949 Msa1133950:three_prime_UTR 30.0%
! AATTTGTTTGCATTGCGTTT+GGG + chr7_4:262931-262950 Msa1133950:three_prime_UTR 30.0%
AAAAGGATGCACTAAAGTAT+GGG - chr7_4:263004-263023 None:intergenic 30.0%
AAAAAGGATGCACTAAAGTA+TGG - chr7_4:263005-263024 None:intergenic 30.0%
! TGATCTTAGAAAGTGTGAAA+AGG + chr7_4:263067-263086 Msa1133950:three_prime_UTR 30.0%
GTAGAGGAATTCGAATACTT+AGG - chr7_4:254989-255008 None:intergenic 35.0%
TAAGTGGCAAAAATCGTAAC+CGG - chr7_4:255195-255214 None:intergenic 35.0%
CAACAAACAAACCTGTTTAG+CGG - chr7_4:255496-255515 None:intergenic 35.0%
!! CATCAAGAAGACTTTAGGAT+CGG - chr7_4:255639-255658 None:intergenic 35.0%
GATCCTAAAGTCTTCTTGAT+GGG + chr7_4:255638-255657 Msa1133950:CDS 35.0%
GCTGATAAGTTAGCATATAG+AGG + chr7_4:255750-255769 Msa1133950:intron 35.0%
!! GAGTTAAGCTTTTTCCGTAA+AGG + chr7_4:255806-255825 Msa1133950:intron 35.0%
TTTCAGTCGAATGTGCTTAT+AGG + chr7_4:256113-256132 Msa1133950:intron 35.0%
CACTAAAATTGCAATCTGAC+AGG - chr7_4:256307-256326 None:intergenic 35.0%
TTGAAGCGTAAATCTTGTCA+TGG - chr7_4:256512-256531 None:intergenic 35.0%
! GTTTTACGAAAATAGGGACT+AGG - chr7_4:256578-256597 None:intergenic 35.0%
AAGGTCAACTAAGTACTTCA+GGG - chr7_4:256747-256766 None:intergenic 35.0%
TAAGGTCAACTAAGTACTTC+AGG - chr7_4:256748-256767 None:intergenic 35.0%
TTGACCTTAAGATTCCTTTG+AGG + chr7_4:256759-256778 Msa1133950:intron 35.0%
GTATCCTCAAAGGAATCTTA+AGG - chr7_4:256766-256785 None:intergenic 35.0%
! CATTCTCTTTTCTACGCTTT+TGG - chr7_4:256797-256816 None:intergenic 35.0%
! CAAAAGCGTAGAAAAGAGAA+TGG + chr7_4:256795-256814 Msa1133950:intron 35.0%
GCCCGTCATATTATATATGT+CGG - chr7_4:256864-256883 None:intergenic 35.0%
!! TATAATATGACGGGCAAAAC+TGG + chr7_4:256869-256888 Msa1133950:intron 35.0%
GTTTATGCATGTATGTGTGT+GGG - chr7_4:257019-257038 None:intergenic 35.0%
AGTTTATGCATGTATGTGTG+TGG - chr7_4:257020-257039 None:intergenic 35.0%
CAATGGTCATATTAACGACT+AGG - chr7_4:257114-257133 None:intergenic 35.0%
!!! TTTCAGTTTTAGAGTTGAGG+TGG + chr7_4:257168-257187 Msa1133950:intron 35.0%
AGGATATTTCCACCTGAAAA+TGG + chr7_4:257288-257307 Msa1133950:intron 35.0%
!! TACACTAAACCATTTTCAGG+TGG - chr7_4:257300-257319 None:intergenic 35.0%
AGAATATCAAGGTGCATACA+AGG + chr7_4:257394-257413 Msa1133950:CDS 35.0%
! TGTTCAAGTTATTTCCTTGC+TGG + chr7_4:257436-257455 Msa1133950:intron 35.0%
CCCTTGGAAATCTAAATTGA+AGG - chr7_4:257513-257532 None:intergenic 35.0%
TTAGATTTCCAAGGGACTAT+TGG + chr7_4:257518-257537 Msa1133950:intron 35.0%
TTAATCCTGTCATTGCTTTG+AGG + chr7_4:257698-257717 Msa1133950:intron 35.0%
ATAAACCTCAAAGCAATGAC+AGG - chr7_4:257706-257725 None:intergenic 35.0%
TTATTAGATGGATGCACAGA+TGG - chr7_4:257770-257789 None:intergenic 35.0%
! TGGTAATGTAATGTGATGGA+TGG + chr7_4:257809-257828 Msa1133950:intron 35.0%
TGTTACTAGAGTTAAGAAGC+AGG - chr7_4:257933-257952 None:intergenic 35.0%
GGAAATAAACTAACCACTCA+TGG - chr7_4:258005-258024 None:intergenic 35.0%
AAAATCCCTTAGAGTGTGTT+TGG + chr7_4:258782-258801 Msa1133950:intron 35.0%
ATCATCCAAACACACTCTAA+GGG - chr7_4:258790-258809 None:intergenic 35.0%
GAGGGAATTCAAATACTTTG+AGG - chr7_4:258856-258875 None:intergenic 35.0%
GAGGAAATGTAATGTTACGA+GGG - chr7_4:258874-258893 None:intergenic 35.0%
TGAGGAAATGTAATGTTACG+AGG - chr7_4:258875-258894 None:intergenic 35.0%
TGAATTCCATTGTTTGGATG+GGG - chr7_4:258914-258933 None:intergenic 35.0%
GTGAATTCCATTGTTTGGAT+GGG - chr7_4:258915-258934 None:intergenic 35.0%
TTGAGGTGAATTCCATTGTT+TGG - chr7_4:258920-258939 None:intergenic 35.0%
GAGGGAATTCAAATACTTTG+AGG - chr7_4:258856-258875 None:intergenic 35.0%
GAGGGAATGTAATGTTATGA+GGG - chr7_4:258955-258974 None:intergenic 35.0%
TGAGGGAATGTAATGTTATG+AGG - chr7_4:258956-258975 None:intergenic 35.0%
! TTCTAAGAGTGTGTTTGGAT+GGG - chr7_4:258988-259007 None:intergenic 35.0%
! ATTCTAAGAGTGTGTTTGGA+TGG - chr7_4:258989-259008 None:intergenic 35.0%
! TAGGATTCTAAGAGTGTGTT+TGG - chr7_4:258993-259012 None:intergenic 35.0%
! TCACTGGTTGTAACTTCTAA+GGG - chr7_4:259029-259048 None:intergenic 35.0%
TGTTCATTAAATATGCAGGC+TGG + chr7_4:259152-259171 Msa1133950:intron 35.0%
GTTCATTAAATATGCAGGCT+GGG + chr7_4:259153-259172 Msa1133950:intron 35.0%
AATGTCATAAACTCCACAAC+AGG - chr7_4:259221-259240 None:intergenic 35.0%
ACCAAACACAGAGAAATCAT+GGG - chr7_4:259337-259356 None:intergenic 35.0%
AACCAAACACAGAGAAATCA+TGG - chr7_4:259338-259357 None:intergenic 35.0%
!!! TCTGTGTTTGGTTTTCTGTT+TGG + chr7_4:259345-259364 Msa1133950:intron 35.0%
GCTTCCTTCAGATTATTAGA+TGG + chr7_4:259417-259436 Msa1133950:intron 35.0%
GATGCCATCTAATAATCTGA+AGG - chr7_4:259424-259443 None:intergenic 35.0%
AGAATGATGTCTTTCACTCT+GGG - chr7_4:259686-259705 None:intergenic 35.0%
AAGAATGATGTCTTTCACTC+TGG - chr7_4:259687-259706 None:intergenic 35.0%
AAGGATTTGAAGATTCTGAG+GGG - chr7_4:259926-259945 None:intergenic 35.0%
CAAGGATTTGAAGATTCTGA+GGG - chr7_4:259927-259946 None:intergenic 35.0%
TCAAGGATTTGAAGATTCTG+AGG - chr7_4:259928-259947 None:intergenic 35.0%
!!! CTGTTTTGACTCAGTTATCA+AGG - chr7_4:259945-259964 None:intergenic 35.0%
ATTTCTGTATGCATGGTGAA+AGG + chr7_4:260190-260209 Msa1133950:intron 35.0%
AATCAATCACGGGATTACAT+GGG - chr7_4:260224-260243 None:intergenic 35.0%
! CTGTAGTTTGTATCTTTAGG+AGG - chr7_4:260249-260268 None:intergenic 35.0%
TCTTCCAATATAGAGCTCAA+CGG - chr7_4:260291-260310 None:intergenic 35.0%
ATCACCAATTATGTGGTGTT+TGG + chr7_4:260412-260431 Msa1133950:intron 35.0%
CTAACCAAACACCACATAAT+TGG - chr7_4:260419-260438 None:intergenic 35.0%
!!! GTCAGTCAAGTTTTGTTTGT+TGG + chr7_4:260466-260485 Msa1133950:intron 35.0%
CAGGAAGAATTGCAAACATA+AGG - chr7_4:260603-260622 None:intergenic 35.0%
TAGTAAGCCAAGAAGATGAA+GGG - chr7_4:260808-260827 None:intergenic 35.0%
TTGGGTCCTCTAAATACAAT+AGG - chr7_4:260956-260975 None:intergenic 35.0%
ATTGTATTTAGAGGACCCAA+TGG + chr7_4:260956-260975 Msa1133950:CDS 35.0%
CTGAAGTATATGTGCTCAAT+GGG - chr7_4:261098-261117 None:intergenic 35.0%
ACTGAAGTATATGTGCTCAA+TGG - chr7_4:261099-261118 None:intergenic 35.0%
TGCATAAAAGCAAAGTTGTG+GGG - chr7_4:261141-261160 None:intergenic 35.0%
CTGCATAAAAGCAAAGTTGT+GGG - chr7_4:261142-261161 None:intergenic 35.0%
ACTGCATAAAAGCAAAGTTG+TGG - chr7_4:261143-261162 None:intergenic 35.0%
TTATGCAGTGTTATGCATCT+TGG + chr7_4:261154-261173 Msa1133950:intron 35.0%
TGACTTATGTGCTGTAGATA+TGG + chr7_4:261390-261409 Msa1133950:intron 35.0%
GAAACTGGAATCAAGAACTT+CGG - chr7_4:261436-261455 None:intergenic 35.0%
CTTAACAGATTGAGAGAGAA+GGG + chr7_4:261578-261597 Msa1133950:intron 35.0%
!! AAAGCCAACCATTTTTGAGA+AGG - chr7_4:261623-261642 None:intergenic 35.0%
TTACCTAGTAGTATGTGAGA+TGG + chr7_4:261716-261735 Msa1133950:intron 35.0%
TATCCATCTCACATACTACT+AGG - chr7_4:261722-261741 None:intergenic 35.0%
GTAGTATGTGAGATGGATAT+AGG + chr7_4:261723-261742 Msa1133950:intron 35.0%
! CCAAAGAGAAAGTGCATAAA+GGG - chr7_4:261985-262004 None:intergenic 35.0%
! ACCAAAGAGAAAGTGCATAA+AGG - chr7_4:261986-262005 None:intergenic 35.0%
CATTATATCTCTTTGCTTGC+TGG + chr7_4:262333-262352 Msa1133950:intron 35.0%
! TCATGTCTTGGTTAGTTCTT+TGG + chr7_4:262468-262487 Msa1133950:three_prime_UTR 35.0%
TGATAACAATGACACAAGAG+AGG + chr7_4:262705-262724 Msa1133950:three_prime_UTR 35.0%
!! ACAAGAGAGGAAGTTTTGTA+TGG + chr7_4:262718-262737 Msa1133950:three_prime_UTR 35.0%
!! AAGTTTTGTATGGAACCTAG+TGG + chr7_4:262728-262747 Msa1133950:three_prime_UTR 35.0%
AAAAACAGAAGTTGACCACT+AGG - chr7_4:262746-262765 None:intergenic 35.0%
TAAGATCAAATCGACGTGAT+AGG - chr7_4:263055-263074 None:intergenic 35.0%
!! TCAGAGTTGGTGAGTATCAA+TGG - chr7_4:255037-255056 None:intergenic 40.0%
GGAACGAAAAGTTTCAGAGT+TGG - chr7_4:255050-255069 None:intergenic 40.0%
!! TCTGAAACTTTTCGTTCCAC+AGG + chr7_4:255052-255071 Msa1133950:five_prime_UTR 40.0%
ATGAATCGAGAAAGGAAGAG+TGG - chr7_4:255082-255101 None:intergenic 40.0%
!! GGTTACGATTTTTGCCACTT+AGG + chr7_4:255194-255213 Msa1133950:intron 40.0%
AGAAGAGAGATGTCTGAATG+CGG - chr7_4:255472-255491 None:intergenic 40.0%
CGATCCTAAAGTCTTCTTGA+TGG + chr7_4:255637-255656 Msa1133950:CDS 40.0%
TCACCCATCAAGAAGACTTT+AGG - chr7_4:255644-255663 None:intergenic 40.0%
TGAAGAGGTAAAGCGAGATA+TGG + chr7_4:255661-255680 Msa1133950:intron 40.0%
AAGCTACGAATATCCGCTAT+AGG - chr7_4:255785-255804 None:intergenic 40.0%
AACACTACAAAGGGTCTGTT+TGG - chr7_4:255874-255893 None:intergenic 40.0%
AACAGACCCTTTGTAGTGTT+TGG + chr7_4:255874-255893 Msa1133950:intron 40.0%
!! AAGTCCAAGTCGGTTTTGTA+GGG - chr7_4:256376-256395 None:intergenic 40.0%
!! AAAACCGACTTGGACTTGTA+AGG + chr7_4:256379-256398 Msa1133950:intron 40.0%
GGTCAGAAAATCTGTTTGAG+TGG - chr7_4:256425-256444 None:intergenic 40.0%
TATCAGACTTCTCAACAACC+AGG + chr7_4:256458-256477 Msa1133950:intron 40.0%
TAACACAAAAGTCAAAGGCC+TGG - chr7_4:256479-256498 None:intergenic 40.0%
AGTAGGTAGATAGTACGAAG+CGG + chr7_4:256662-256681 Msa1133950:intron 40.0%
CGTAGAAAAGAGAATGGAAG+AGG + chr7_4:256801-256820 Msa1133950:intron 40.0%
! AAGAATACCTCTAAGAGACC+TGG + chr7_4:256829-256848 Msa1133950:intron 40.0%
ATATGTCGGAATATAGGACC+AGG - chr7_4:256850-256869 None:intergenic 40.0%
! TGATTTGTACATTCCGAAGC+CGG + chr7_4:257059-257078 Msa1133950:intron 40.0%
CATATTAACGACTAGGCAAG+TGG - chr7_4:257107-257126 None:intergenic 40.0%
GTTCATTCATGCAATGCAAG+TGG - chr7_4:257214-257233 None:intergenic 40.0%
TTGTAAGGGGAAGATTGTGT+GGG - chr7_4:257243-257262 None:intergenic 40.0%
ATTGTAAGGGGAAGATTGTG+TGG - chr7_4:257244-257263 None:intergenic 40.0%
TTGCTTATGACATCTGCTTC+AGG + chr7_4:257268-257287 Msa1133950:intron 40.0%
TATCAAGGTGCATACAAGGT+TGG + chr7_4:257398-257417 Msa1133950:intron 40.0%
AAATAAAGCAACAGCCAGCA+AGG - chr7_4:257453-257472 None:intergenic 40.0%
ATACTTCTCCAATAGTCCCT+TGG - chr7_4:257529-257548 None:intergenic 40.0%
AAGGGACTATTGGAGAAGTA+TGG + chr7_4:257528-257547 Msa1133950:CDS 40.0%
GTTTAAACCTCGCAAATCAG+TGG - chr7_4:257634-257653 None:intergenic 40.0%
GGTTTATATACCAGTGCTTG+TGG + chr7_4:257719-257738 Msa1133950:intron 40.0%
ATATACCAGTGCTTGTGGAT+TGG + chr7_4:257724-257743 Msa1133950:intron 40.0%
!! ATGTAATGTGATGGATGGCA+TGG + chr7_4:257814-257833 Msa1133950:intron 40.0%
!! TGTAATGTGATGGATGGCAT+GGG + chr7_4:257815-257834 Msa1133950:intron 40.0%
!! ACATTTTTCGGTACCATGAG+TGG + chr7_4:257989-258008 Msa1133950:intron 40.0%
CATCATCCAAACACACTCTA+AGG - chr7_4:258791-258810 None:intergenic 40.0%
GGGAATGCAATGTAATGTTG+AGG - chr7_4:258893-258912 None:intergenic 40.0%
GAATTCCATTGTTTGGATGG+GGG - chr7_4:258913-258932 None:intergenic 40.0%
GGTGAATTCCATTGTTTGGA+TGG - chr7_4:258916-258935 None:intergenic 40.0%
! TCTAAGAGTGTGTTTGGATG+GGG - chr7_4:258987-259006 None:intergenic 40.0%
TAAGGGGGATGTATTGGATT+AGG - chr7_4:259012-259031 None:intergenic 40.0%
! AACTTCTAAGGGGGATGTAT+TGG - chr7_4:259018-259037 None:intergenic 40.0%
! ACTGGTTGTAACTTCTAAGG+GGG - chr7_4:259027-259046 None:intergenic 40.0%
! CACTGGTTGTAACTTCTAAG+GGG - chr7_4:259028-259047 None:intergenic 40.0%
! CTCACTGGTTGTAACTTCTA+AGG - chr7_4:259030-259049 None:intergenic 40.0%
TAGAAGTTACAACCAGTGAG+TGG + chr7_4:259030-259049 Msa1133950:intron 40.0%
TTCATACAAAGTCCACTCAC+TGG - chr7_4:259045-259064 None:intergenic 40.0%
! GACATTTAACTTCTCCATGC+AGG + chr7_4:259235-259254 Msa1133950:CDS 40.0%
GAGATAAACACTAACCTGCA+TGG - chr7_4:259252-259271 None:intergenic 40.0%
CCAAACACAGAGAAATCATG+GGG - chr7_4:259336-259355 None:intergenic 40.0%
! ATAGTGATGTGGCTTGTGAA+CGG + chr7_4:259852-259871 Msa1133950:intron 40.0%
AAAGCTCAAACCATAATCCG+TGG + chr7_4:260042-260061 Msa1133950:intron 40.0%
AAGCTCAAACCATAATCCGT+GGG + chr7_4:260043-260062 Msa1133950:intron 40.0%
CAATCAATCACGGGATTACA+TGG - chr7_4:260225-260244 None:intergenic 40.0%
TTTAGGAGGGCAATCAATCA+CGG - chr7_4:260235-260254 None:intergenic 40.0%
ACAAACTACAGATTTGTGGC+TGG + chr7_4:260258-260277 Msa1133950:intron 40.0%
AAACCCGTTGAGCTCTATAT+TGG + chr7_4:260284-260303 Msa1133950:intron 40.0%
CTTCCAATATAGAGCTCAAC+GGG - chr7_4:260290-260309 None:intergenic 40.0%
GAGCTCTATATTGGAAGATC+TGG + chr7_4:260293-260312 Msa1133950:intron 40.0%
!! CAAAACTTGACTGACTCGTA+TGG - chr7_4:260461-260480 None:intergenic 40.0%
CTAGTAAGCCAAGAAGATGA+AGG - chr7_4:260809-260828 None:intergenic 40.0%
CTTCATCTTCTTGGCTTACT+AGG + chr7_4:260807-260826 Msa1133950:intron 40.0%
GTCATCTTGATTTCTGTTGC+AGG + chr7_4:260865-260884 Msa1133950:intron 40.0%
CAGTGTTATGCATCTTGGTA+TGG + chr7_4:261159-261178 Msa1133950:intron 40.0%
CGAGCATCTTCAGATGAATA+TGG - chr7_4:261213-261232 None:intergenic 40.0%
TATTCATCTGAAGATGCTCG+TGG + chr7_4:261213-261232 Msa1133950:CDS 40.0%
CAAGGAAAACTACAGGATCA+GGG - chr7_4:261263-261282 None:intergenic 40.0%
TCAAGGAAAACTACAGGATC+AGG - chr7_4:261264-261283 None:intergenic 40.0%
!! AGTACCTTTGCTTTTCCGAT+GGG - chr7_4:261465-261484 None:intergenic 40.0%
!! AAGTACCTTTGCTTTTCCGA+TGG - chr7_4:261466-261485 None:intergenic 40.0%
GCTTAACAGATTGAGAGAGA+AGG + chr7_4:261577-261596 Msa1133950:intron 40.0%
ACAGCCTTCTCAAAAATGGT+TGG + chr7_4:261616-261635 Msa1133950:CDS 40.0%
!! AATGGTTGGCTTTGCTCTAA+AGG + chr7_4:261630-261649 Msa1133950:CDS 40.0%
TGCAAATGTGTTTGCTTGGT+AGG - chr7_4:261866-261885 None:intergenic 40.0%
CCCTTTATGCACTTTCTCTT+TGG + chr7_4:261982-262001 Msa1133950:intron 40.0%
!! TTTCCTGACAGAAGCATTGA+TGG - chr7_4:262086-262105 None:intergenic 40.0%
!! TTTTGGCTATCTTGATGCAC+CGG + chr7_4:262189-262208 Msa1133950:CDS 40.0%
!! AGATTTGCTGCATAAGGCAT+GGG - chr7_4:262241-262260 None:intergenic 40.0%
!! CTTTCCAGATTTGCTGCATA+AGG - chr7_4:262247-262266 None:intergenic 40.0%
TGCAGCAAATCTGGAAAGAT+TGG + chr7_4:262249-262268 Msa1133950:CDS 40.0%
! TCTTTGCTTGCTGGTATATG+TGG + chr7_4:262342-262361 Msa1133950:intron 40.0%
! AGGTTGTGGTGGAAATTTGA+GGG - chr7_4:262521-262540 None:intergenic 40.0%
! CTTTTTGTATGAGGTTGTGG+TGG - chr7_4:262532-262551 None:intergenic 40.0%
!!! CCACTTTTTGTATGAGGTTG+TGG - chr7_4:262535-262554 None:intergenic 40.0%
CCACAACCTCATACAAAAAG+TGG + chr7_4:262532-262551 Msa1133950:three_prime_UTR 40.0%
!! TCATTGATTCTGTCAGGCTT+TGG + chr7_4:262561-262580 Msa1133950:three_prime_UTR 40.0%
ACTCAAAACAGCAAGCAAGT+TGG - chr7_4:262840-262859 None:intergenic 40.0%
TTGAATTGTGGCTGTTATCC+CGG + chr7_4:262957-262976 Msa1133950:three_prime_UTR 40.0%
! GAAAGTGTGAAAAGGCAGAT+TGG + chr7_4:263075-263094 Msa1133950:three_prime_UTR 40.0%
AAGGAAGAGTGGAATACCTG+TGG - chr7_4:255071-255090 None:intergenic 45.0%
!! GTGTTTTTGTGAGATCTCGC+CGG + chr7_4:255173-255192 Msa1133950:intron 45.0%
TGTCTGAATGCGGAAAAGGA+AGG - chr7_4:255462-255481 None:intergenic 45.0%
GAGATGTCTGAATGCGGAAA+AGG - chr7_4:255466-255485 None:intergenic 45.0%
TCTCTCTTCTTCCGCTAAAC+AGG + chr7_4:255482-255501 Msa1133950:CDS 45.0%
!! CAAGAAGACTTTAGGATCGG+CGG - chr7_4:255636-255655 None:intergenic 45.0%
! AGTCTTCTTGATGGGTGAAG+AGG + chr7_4:255646-255665 Msa1133950:CDS 45.0%
AGATTTCGTAGGGCTCTGTT+TGG + chr7_4:255718-255737 Msa1133950:intron 45.0%
GAGGATGAGCTATCCTATAG+CGG + chr7_4:255769-255788 Msa1133950:intron 45.0%
CCTCTTTCCTAGGTTCTGTT+TGG - chr7_4:256170-256189 None:intergenic 45.0%
CCAAACAGAACCTAGGAAAG+AGG + chr7_4:256167-256186 Msa1133950:intron 45.0%
ACTGATCTTGCCTCTTTCCT+AGG - chr7_4:256180-256199 None:intergenic 45.0%
CCACTCTAGACAACCAATCA+AGG - chr7_4:256217-256236 None:intergenic 45.0%
! CCTTGATTGGTTGTCTAGAG+TGG + chr7_4:256214-256233 Msa1133950:intron 45.0%
GAAACCCTACAAAACCGACT+TGG + chr7_4:256369-256388 Msa1133950:intron 45.0%
!! CAAGTCCAAGTCGGTTTTGT+AGG - chr7_4:256377-256396 None:intergenic 45.0%
GTCACCTTACAAGTCCAAGT+CGG - chr7_4:256386-256405 None:intergenic 45.0%
TATAGGACCAGGTCTCTTAG+AGG - chr7_4:256839-256858 None:intergenic 45.0%
GATTTGTACATTCCGAAGCC+GGG + chr7_4:257060-257079 Msa1133950:intron 45.0%
ATTTGTACATTCCGAAGCCG+GGG + chr7_4:257061-257080 Msa1133950:intron 45.0%
AACTTGAACAGAAGAAGCCC+CGG - chr7_4:257081-257100 None:intergenic 45.0%
ATTCATGCAATGCAAGTGGC+TGG - chr7_4:257210-257229 None:intergenic 45.0%
TTGTACCAATCCACAAGCAC+TGG - chr7_4:257732-257751 None:intergenic 45.0%
!! GTAATGTGATGGATGGCATG+GGG + chr7_4:257816-257835 Msa1133950:intron 45.0%
AGTTAGCAGAAGTTCGCATG+AGG - chr7_4:257861-257880 None:intergenic 45.0%
! TTCCATCTTAGGGGGTGTAT+TGG + chr7_4:258021-258040 Msa1133950:intron 45.0%
ATCCAATACACCCCCTAAGA+TGG - chr7_4:258026-258045 None:intergenic 45.0%
ATAAAGAGAGGGGAGAAGAG+AGG + chr7_4:258319-258338 Msa1133950:intron 45.0%
GAGAGAGAGAGAGAAAAGAG+AGG + chr7_4:258376-258395 Msa1133950:intron 45.0%
GAAAAGAGAGGAGAGAGAGA+AGG + chr7_4:258434-258453 Msa1133950:intron 45.0%
AGGAGAGAGAGAAGGATGAA+GGG + chr7_4:258442-258461 Msa1133950:intron 45.0%
!! TGGATGGGGGAATGTTTTGA+GGG - chr7_4:258973-258992 None:intergenic 45.0%
! TTGGATGGGGGAATGTTTTG+AGG - chr7_4:258974-258993 None:intergenic 45.0%
! CTAAGAGTGTGTTTGGATGG+GGG - chr7_4:258986-259005 None:intergenic 45.0%
AATATGCAGGCTGGGTTTAC+TGG + chr7_4:259161-259180 Msa1133950:intron 45.0%
ATATGCAGGCTGGGTTTACT+GGG + chr7_4:259162-259181 Msa1133950:intron 45.0%
! CTATGGTCTAAAGCCTGTTG+TGG + chr7_4:259205-259224 Msa1133950:CDS 45.0%
CCCCATGATTTCTCTGTGTT+TGG + chr7_4:259333-259352 Msa1133950:intron 45.0%
AAACCACACCATACAGTTGG+AGG + chr7_4:259876-259895 Msa1133950:intron 45.0%
AACCACACCATACAGTTGGA+GGG + chr7_4:259877-259896 Msa1133950:intron 45.0%
AGCTCAAACCATAATCCGTG+GGG + chr7_4:260044-260063 Msa1133950:intron 45.0%
TGGAGGTGAATTAGAAGGGT+AGG + chr7_4:260067-260086 Msa1133950:intron 45.0%
GTGAATTAGAAGGGTAGGCA+TGG + chr7_4:260072-260091 Msa1133950:intron 45.0%
AAACCCCAACAGAAACCTGA+CGG + chr7_4:260098-260117 Msa1133950:intron 45.0%
ATCACGGGATTACATGGGTT+GGG - chr7_4:260219-260238 None:intergenic 45.0%
AATCACGGGATTACATGGGT+TGG - chr7_4:260220-260239 None:intergenic 45.0%
TTAGGAGGGCAATCAATCAC+GGG - chr7_4:260234-260253 None:intergenic 45.0%
AACTACAGATTTGTGGCTGG+AGG + chr7_4:260261-260280 Msa1133950:intron 45.0%
AAGCACTCCCTTCATCTTCT+TGG + chr7_4:260798-260817 Msa1133950:intron 45.0%
!! ATGCCCTGGGTTGAAAGTTT+TGG + chr7_4:261185-261204 Msa1133950:CDS 45.0%
GTGCCAAAACTTTCAACCCA+GGG - chr7_4:261191-261210 None:intergenic 45.0%
CAAGAACTTCGGCAGAAACA+GGG - chr7_4:261425-261444 None:intergenic 45.0%
TCAAGAACTTCGGCAGAAAC+AGG - chr7_4:261426-261445 None:intergenic 45.0%
ATGTGTTTGCTTGGTAGGAC+AGG - chr7_4:261861-261880 None:intergenic 45.0%
AAAGGAAGGAATCAGTGCTG+AGG + chr7_4:261927-261946 Msa1133950:CDS 45.0%
TGTCAGGAAAACCAACAGAC+TGG + chr7_4:262096-262115 Msa1133950:CDS 45.0%
TTCAACTGTCACCAGTCTGT+TGG - chr7_4:262110-262129 None:intergenic 45.0%
AGACTGGTGACAGTTGAAGA+AGG + chr7_4:262112-262131 Msa1133950:CDS 45.0%
GACTGGTGACAGTTGAAGAA+GGG + chr7_4:262113-262132 Msa1133950:CDS 45.0%
AATCTGTGCATCTGTCATCG+AGG + chr7_4:262162-262181 Msa1133950:CDS 45.0%
! TCTGTCATCGAGGAGAGTTT+TGG + chr7_4:262172-262191 Msa1133950:CDS 45.0%
!! CAGATTTGCTGCATAAGGCA+TGG - chr7_4:262242-262261 None:intergenic 45.0%
CATGCCTTATGCAGCAAATC+TGG + chr7_4:262240-262259 Msa1133950:CDS 45.0%
ATTTAGGCAGTTGCAGCCAT+AGG - chr7_4:262424-262443 None:intergenic 45.0%
! GAGGTTGTGGTGGAAATTTG+AGG - chr7_4:262522-262541 None:intergenic 45.0%
TAATTCCCAGCATATCTGGG+AGG + chr7_4:262659-262678 Msa1133950:three_prime_UTR 45.0%
AACATCCTCCCAGATATGCT+GGG - chr7_4:262667-262686 None:intergenic 45.0%
TAGCATACCGGAAACTGCAA+AGG + chr7_4:262814-262833 Msa1133950:three_prime_UTR 45.0%
!! AAGTTGGCCTTTGCAGTTTC+CGG - chr7_4:262824-262843 None:intergenic 45.0%
! GCGTTTGGGACTTTGAATTG+TGG + chr7_4:262945-262964 Msa1133950:three_prime_UTR 45.0%
TCTCAGAAGCAGGCTTATAC+CGG - chr7_4:262979-262998 None:intergenic 45.0%
AGTATGGGTATCTCAGAAGC+AGG - chr7_4:262989-263008 None:intergenic 45.0%
GGTCTTGCCAAACAGAACCT+AGG + chr7_4:256160-256179 Msa1133950:intron 50.0%
AGTGTAACGCCTCAGCATTG+AGG - chr7_4:256689-256708 None:intergenic 50.0%
! TGGAGAAGTATGGTCCTGAG+AGG + chr7_4:257538-257557 Msa1133950:CDS 50.0%
! GGAGAAGTATGGTCCTGAGA+GGG + chr7_4:257539-257558 Msa1133950:CDS 50.0%
!! TTTGCAGCCACTGATTTGCG+AGG + chr7_4:257624-257643 Msa1133950:intron 50.0%
CATGAAAGGAAGGACAGCGA+GGG - chr7_4:257660-257679 None:intergenic 50.0%
ACATGAAAGGAAGGACAGCG+AGG - chr7_4:257661-257680 None:intergenic 50.0%
TAGATGGATGCACAGATGGC+AGG - chr7_4:257766-257785 None:intergenic 50.0%
! ATGGCATGGGGTGTCATGTT+GGG + chr7_4:257828-257847 Msa1133950:intron 50.0%
AGGAGAGAGACGAAGAGAGA+AGG + chr7_4:258396-258415 Msa1133950:intron 50.0%
GGAGAGAGACGAAGAGAGAA+GGG + chr7_4:258397-258416 Msa1133950:intron 50.0%
AGAGAGGAGGGAGAAAAGAG+AGG + chr7_4:258422-258441 Msa1133950:intron 50.0%
GAGGAGAGAGAGAAGGATGA+AGG + chr7_4:258441-258460 Msa1133950:intron 50.0%
GCATTCCCCCATCCAAACAA+TGG + chr7_4:258905-258924 Msa1133950:intron 50.0%
GGGTTTACTGGGATTGGAGT+TGG + chr7_4:259173-259192 Msa1133950:CDS 50.0%
!! GGAGTTGGTGCTGCTTACTA+TGG + chr7_4:259188-259207 Msa1133950:CDS 50.0%
GGAATCTGCAAGCAATGCTC+TGG + chr7_4:259366-259385 Msa1133950:intron 50.0%
GGCAAACCACACCATACAGT+TGG + chr7_4:259873-259892 Msa1133950:intron 50.0%
ACCACACCATACAGTTGGAG+GGG + chr7_4:259878-259897 Msa1133950:intron 50.0%
TCAAACCATAATCCGTGGGG+TGG + chr7_4:260047-260066 Msa1133950:intron 50.0%
TCTAATTCACCTCCACCCCA+CGG - chr7_4:260062-260081 None:intergenic 50.0%
TGGGGTGGAGGTGAATTAGA+AGG + chr7_4:260062-260081 Msa1133950:intron 50.0%
GGGGTGGAGGTGAATTAGAA+GGG + chr7_4:260063-260082 Msa1133950:intron 50.0%
AACCCCAACAGAAACCTGAC+GGG + chr7_4:260099-260118 Msa1133950:intron 50.0%
ACTGATATTGTGTCCCCGTC+AGG - chr7_4:260116-260135 None:intergenic 50.0%
GGTGCCAAAACTTTCAACCC+AGG - chr7_4:261192-261211 None:intergenic 50.0%
TCCAGTTTCTGCCTTCCCAT+CGG + chr7_4:261447-261466 Msa1133950:CDS 50.0%
!! CCTTTGCTTTTCCGATGGGA+AGG - chr7_4:261461-261480 None:intergenic 50.0%
CCTTCCCATCGGAAAAGCAA+AGG + chr7_4:261458-261477 Msa1133950:CDS 50.0%
TTGCTTGGTAGGACAGGAAG+AGG - chr7_4:261855-261874 None:intergenic 50.0%
GCTGAGACACTAGCAAAGGA+AGG + chr7_4:261913-261932 Msa1133950:CDS 50.0%
! GAAGGAATCAGTGCTGAGGT+AGG + chr7_4:261931-261950 Msa1133950:intron 50.0%
!! TTGATGGTGGCTCGATCAAG+CGG - chr7_4:262070-262089 None:intergenic 50.0%
!! CCTGACAGAAGCATTGATGG+TGG - chr7_4:262083-262102 None:intergenic 50.0%
CCACCATCAATGCTTCTGTC+AGG + chr7_4:262080-262099 Msa1133950:CDS 50.0%
GAAGAAGGGTTTCCTCAGCA+TGG + chr7_4:262127-262146 Msa1133950:CDS 50.0%
ATGCCACAGATCTGTGCCTA+TGG + chr7_4:262405-262424 Msa1133950:CDS 50.0%
GAACATCCTCCCAGATATGC+TGG - chr7_4:262668-262687 None:intergenic 50.0%
CTCAGAAGCAGGCTTATACC+GGG - chr7_4:262978-262997 None:intergenic 50.0%
! GAGAGAGAGAGAGAGCGTAG+AGG - chr7_4:255005-255024 None:intergenic 55.0%
AACAGAAGAAGCCCCGGCTT+CGG - chr7_4:257075-257094 None:intergenic 55.0%
! TGCAATGCAAGTGGCTGGCT+AGG - chr7_4:257205-257224 None:intergenic 55.0%
TCTCGACACTCCCATCACTG+AGG + chr7_4:257563-257582 Msa1133950:CDS 55.0%
AAAGGAAGGACAGCGAGGGA+TGG - chr7_4:257656-257675 None:intergenic 55.0%
! GATGGCATGGGGTGTCATGT+TGG + chr7_4:257827-257846 Msa1133950:intron 55.0%
AAGAGAGGGGAGAAGAGAGG+AGG + chr7_4:258322-258341 Msa1133950:intron 55.0%
AGAGAGGGGAGAAGAGAGGA+GGG + chr7_4:258323-258342 Msa1133950:intron 55.0%
CGAAGAGAGAAGGGAGAGAG+AGG + chr7_4:258406-258425 Msa1133950:intron 55.0%
AGAGAGAAGGGAGAGAGAGG+AGG + chr7_4:258409-258428 Msa1133950:intron 55.0%
GAGAGAAGGGAGAGAGAGGA+GGG + chr7_4:258410-258429 Msa1133950:intron 55.0%
CAGGCTGGGTTTACTGGGAT+TGG + chr7_4:259167-259186 Msa1133950:intron 55.0%
CCACACCATACAGTTGGAGG+GGG + chr7_4:259879-259898 Msa1133950:intron 55.0%
AACCATAATCCGTGGGGTGG+AGG + chr7_4:260050-260069 Msa1133950:intron 55.0%
ACCCCAACAGAAACCTGACG+GGG + chr7_4:260100-260119 Msa1133950:intron 55.0%
TCCCCGTCAGGTTTCTGTTG+GGG - chr7_4:260104-260123 None:intergenic 55.0%
GTCCCCGTCAGGTTTCTGTT+GGG - chr7_4:260105-260124 None:intergenic 55.0%
TGTCCCCGTCAGGTTTCTGT+TGG - chr7_4:260106-260125 None:intergenic 55.0%
ACACCAGCAGCAGCACCATT+GGG - chr7_4:260974-260993 None:intergenic 55.0%
AACACCAGCAGCAGCACCAT+TGG - chr7_4:260975-260994 None:intergenic 55.0%
!! AATGGTGCTGCTGCTGGTGT+TGG + chr7_4:260974-260993 Msa1133950:CDS 55.0%
TCTTGGTATGGCTCATGCCC+TGG + chr7_4:261171-261190 Msa1133950:CDS 55.0%
CTTGGTATGGCTCATGCCCT+GGG + chr7_4:261172-261191 Msa1133950:CDS 55.0%
TCCGATGGGAAGGCAGAAAC+TGG - chr7_4:261451-261470 None:intergenic 55.0%
GGCTGCTGAGACACTAGCAA+AGG + chr7_4:261909-261928 Msa1133950:intron 55.0%
GGGTTTCCTCAGCATGGTGT+TGG + chr7_4:262133-262152 Msa1133950:CDS 55.0%
TGGCTATCTTGATGCACCGG+TGG + chr7_4:262192-262211 Msa1133950:CDS 55.0%
! GGAAAGATTGGCTGTCCCAC+AGG + chr7_4:262261-262280 Msa1133950:CDS 55.0%
CAGCCATAGGCACAGATCTG+TGG - chr7_4:262411-262430 None:intergenic 55.0%
CGAAGCGGTCCTCAATGCTG+AGG + chr7_4:256677-256696 Msa1133950:intron 60.0%
!! GGAGTGTCGAGAACCCTCTC+AGG - chr7_4:257555-257574 None:intergenic 60.0%
AGAGGAGGGAGAGGAGAGAG+AGG + chr7_4:258337-258356 Msa1133950:intron 60.0%
GAGGAGGGAGAGGAGAGAGA+GGG + chr7_4:258338-258357 Msa1133950:intron 60.0%
GAGAGAGAGGGAGAGGAGAG+AGG + chr7_4:258350-258369 Msa1133950:intron 60.0%
CCCCCTCCAACTGTATGGTG+TGG - chr7_4:259882-259901 None:intergenic 60.0%
CTGTGCCCCCTCCAACTGTA+TGG - chr7_4:259887-259906 None:intergenic 60.0%
! CATACAGTTGGAGGGGGCAC+AGG + chr7_4:259885-259904 Msa1133950:intron 60.0%
! CACCTCCACCCCACGGATTA+TGG - chr7_4:260055-260074 None:intergenic 60.0%
TGGTGGCTCGATCAAGCGGT+CGG - chr7_4:262066-262085 None:intergenic 60.0%
TCAGCGCCAACACCATGCTG+AGG - chr7_4:262142-262161 None:intergenic 60.0%
! GCACCGGTGGAGAGAATTGC+CGG + chr7_4:262205-262224 Msa1133950:CDS 60.0%
CACCGGTGGAGAGAATTGCC+GGG + chr7_4:262206-262225 Msa1133950:CDS 60.0%
ACCGGTGGAGAGAATTGCCG+GGG + chr7_4:262207-262226 Msa1133950:CDS 60.0%
AGGCATGGGAACATCAGCCC+CGG - chr7_4:262227-262246 None:intergenic 60.0%
GGGGAGAAGAGAGGAGGGAG+AGG + chr7_4:258328-258347 Msa1133950:intron 65.0%
GGGAGAGGAGAGAGAGGGAG+AGG + chr7_4:258343-258362 Msa1133950:intron 65.0%
!! GGACCCAATGGTGCTGCTGC+TGG + chr7_4:260968-260987 Msa1133950:CDS 65.0%
GCCCCGGCAATTCTCTCCAC+CGG - chr7_4:262211-262230 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 254835 263104 254835 ID=Msa1133950;Name=Msa1133950
chr7_4 mRNA 254835 263104 254835 ID=Msa1133950-mRNA-1;Parent=Msa1133950;Name=Msa1133950-mRNA-1;_AED=0.08;_eAED=0.08;_QI=259|1|1|1|1|1|14|663|361
chr7_4 exon 254835 255073 254835 ID=Msa1133950-mRNA-1:exon:66;Parent=Msa1133950-mRNA-1
chr7_4 exon 255313 255356 255313 ID=Msa1133950-mRNA-1:exon:67;Parent=Msa1133950-mRNA-1
chr7_4 exon 255447 255503 255447 ID=Msa1133950-mRNA-1:exon:68;Parent=Msa1133950-mRNA-1
chr7_4 exon 255587 255667 255587 ID=Msa1133950-mRNA-1:exon:69;Parent=Msa1133950-mRNA-1
chr7_4 exon 257389 257415 257389 ID=Msa1133950-mRNA-1:exon:70;Parent=Msa1133950-mRNA-1
chr7_4 exon 257522 257584 257522 ID=Msa1133950-mRNA-1:exon:71;Parent=Msa1133950-mRNA-1
chr7_4 exon 259170 259256 259170 ID=Msa1133950-mRNA-1:exon:72;Parent=Msa1133950-mRNA-1
chr7_4 exon 260887 261012 260887 ID=Msa1133950-mRNA-1:exon:73;Parent=Msa1133950-mRNA-1
chr7_4 exon 261162 261295 261162 ID=Msa1133950-mRNA-1:exon:74;Parent=Msa1133950-mRNA-1
chr7_4 exon 261407 261479 261407 ID=Msa1133950-mRNA-1:exon:75;Parent=Msa1133950-mRNA-1
chr7_4 exon 261586 261651 261586 ID=Msa1133950-mRNA-1:exon:76;Parent=Msa1133950-mRNA-1
chr7_4 exon 261910 261948 261910 ID=Msa1133950-mRNA-1:exon:77;Parent=Msa1133950-mRNA-1
chr7_4 exon 262043 262282 262043 ID=Msa1133950-mRNA-1:exon:78;Parent=Msa1133950-mRNA-1
chr7_4 exon 262373 263104 262373 ID=Msa1133950-mRNA-1:exon:79;Parent=Msa1133950-mRNA-1
chr7_4 five_prime_UTR 254835 255073 254835 ID=Msa1133950-mRNA-1:five_prime_utr;Parent=Msa1133950-mRNA-1
chr7_4 five_prime_UTR 255313 255332 255313 ID=Msa1133950-mRNA-1:five_prime_utr;Parent=Msa1133950-mRNA-1
chr7_4 CDS 255333 255356 255333 ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1
chr7_4 CDS 255447 255503 255447 ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1
chr7_4 CDS 255587 255667 255587 ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1
chr7_4 CDS 257389 257415 257389 ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1
chr7_4 CDS 257522 257584 257522 ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1
chr7_4 CDS 259170 259256 259170 ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1
chr7_4 CDS 260887 261012 260887 ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1
chr7_4 CDS 261162 261295 261162 ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1
chr7_4 CDS 261407 261479 261407 ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1
chr7_4 CDS 261586 261651 261586 ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1
chr7_4 CDS 261910 261948 261910 ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1
chr7_4 CDS 262043 262282 262043 ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1
chr7_4 CDS 262373 262441 262373 ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1
chr7_4 three_prime_UTR 262442 263104 262442 ID=Msa1133950-mRNA-1:three_prime_utr;Parent=Msa1133950-mRNA-1
Gene Sequence

>Msa1133950

ATGTTAGGTGTTATAAGAAACAAGAATCTTCTTCGGCCTTCCTTTTCCGCATTCAGACATCTCTCTTCTTCCGCTAAACAGATGACAGTGAGAGATGCTCTTAATTCAGCTCTTGATGAAGAAATGTCCGCCGATCCTAAAGTCTTCTTGATGGGTGAAGAGGTTGGAGAATATCAAGGTGCATACAAGATTTCCAAGGGACTATTGGAGAAGTATGGTCCTGAGAGGGTTCTCGACACTCCCATCACTGAGGCTGGGTTTACTGGGATTGGAGTTGGTGCTGCTTACTATGGTCTAAAGCCTGTTGTGGAGTTTATGACATTTAACTTCTCCATGCAGGCAATAGATCACATCATTAATTCTGCTGCAAAATCAAATTACATGTCTGCTGGGCAAATAAATGTACCTATTGTATTTAGAGGACCCAATGGTGCTGCTGCTGGTGTTGGTGCTCAGCACTCTCATTGTTATGCATCTTGGTATGGCTCATGCCCTGGGTTGAAAGTTTTGGCACCATATTCATCTGAAGATGCTCGTGGTTTACTTAAAGCTGCTATAAGGGACCCTGATCCTGTAGTTTTCCTTGAAAATGAGTTACTATATGGTGAGTCATTCCCTGTTTCTGCCGAAGTTCTTGATTCCAGTTTCTGCCTTCCCATCGGAAAAGCAAAGATTGAGAGAGAAGGGAAAGATGTGACTATTACAGCCTTCTCAAAAATGGTTGGCTTTGCTCTAAAGGCTGCTGAGACACTAGCAAAGGAAGGAATCAGTGCTGAGGTTATTAATTTAAGGTCAATCCGACCGCTTGATCGAGCCACCATCAATGCTTCTGTCAGGAAAACCAACAGACTGGTGACAGTTGAAGAAGGGTTTCCTCAGCATGGTGTTGGCGCTGAAATCTGTGCATCTGTCATCGAGGAGAGTTTTGGCTATCTTGATGCACCGGTGGAGAGAATTGCCGGGGCTGATGTTCCCATGCCTTATGCAGCAAATCTGGAAAGATTGGCTGTCCCACAGATTGAAGATATTGTTCGTGCTGCAAAGAGAGCATGCCACAGATCTGTGCCTATGGCTGCAACTGCCTAA

Protein sequence

>Msa1133950

MLGVIRNKNLLRPSFSAFRHLSSSAKQMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSHCYASWYGSCPGLKVLAPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKMVGFALKAAETLAKEGISAEVINLRSIRPLDRATINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERLAVPQIEDIVRAAKRACHRSVPMAATA*