Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1133950 | XP_003620963.1 | 99.723 | 361 | 1 | 0 | 1 | 361 | 1 | 361 | 0.0 | 737 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1133950 | sp|P52904|ODPB_PEA | 91.413 | 361 | 29 | 2 | 1 | 361 | 1 | 359 | 0.0 | 652 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1133950 | B7FJJ4 | 99.723 | 361 | 1 | 0 | 1 | 361 | 1 | 361 | 0.0 | 737 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0656320 | Msa1133950 | 0.805671 | 1.192731e-49 | -8.615850e-47 |
Msa0658120 | Msa1133950 | 0.804716 | 1.889725e-49 | -8.615850e-47 |
Msa0716700 | Msa1133950 | 0.801093 | 1.059210e-48 | -8.615850e-47 |
Msa1019190 | Msa1133950 | 0.835281 | 1.838825e-56 | -8.615850e-47 |
Msa1046140 | Msa1133950 | 0.855389 | 6.518824e-62 | -8.615850e-47 |
Msa1091030 | Msa1133950 | 0.969661 | 1.883165e-130 | -8.615850e-47 |
Msa1104120 | Msa1133950 | 0.803609 | 3.212542e-49 | -8.615850e-47 |
Msa1133950 | Msa1134020 | 0.931807 | 2.186449e-94 | -8.615850e-47 |
Msa1133950 | Msa1395050 | 0.800652 | 1.303183e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1133950 | MtrunA17_Chr7g0214101 | 99.723 | 361 | 1 | 0 | 1 | 361 | 1 | 361 | 0.0 | 737 |
Msa1133950 | MtrunA17_Chr8g0376411 | 39.665 | 358 | 205 | 2 | 2 | 352 | 51 | 404 | 1.51e-88 | 272 |
Msa1133950 | MtrunA17_Chr3g0116801 | 41.104 | 326 | 188 | 1 | 27 | 352 | 82 | 403 | 2.74e-88 | 271 |
Msa1133950 | MtrunA17_Chr4g0009631 | 34.925 | 335 | 202 | 6 | 23 | 348 | 33 | 360 | 6.29e-64 | 207 |
Msa1133950 | MtrunA17_Chr7g0216531 | 75.000 | 100 | 16 | 2 | 158 | 248 | 12 | 111 | 3.46e-41 | 140 |
Msa1133950 | MtrunA17_Chr7g0216531 | 57.143 | 56 | 24 | 0 | 84 | 139 | 2 | 57 | 2.87e-12 | 62.8 |
Msa1133950 | MtrunA17_Chr7g0216541 | 95.122 | 41 | 2 | 0 | 160 | 200 | 6 | 46 | 1.46e-21 | 86.7 |
Msa1133950 | MtrunA17_Chr3g0138171 | 27.468 | 233 | 142 | 8 | 66 | 290 | 421 | 634 | 3.01e-11 | 64.7 |
Msa1133950 | MtrunA17_Chr8g0367181 | 26.587 | 252 | 167 | 8 | 69 | 317 | 427 | 663 | 3.94e-11 | 64.3 |
Msa1133950 | MtrunA17_Chr8g0367201 | 26.587 | 252 | 167 | 8 | 69 | 317 | 427 | 663 | 4.00e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1133950 | AT5G50850.1 | 86.188 | 362 | 42 | 2 | 1 | 354 | 1 | 362 | 0.0 | 639 |
Msa1133950 | AT1G30120.1 | 40.456 | 351 | 202 | 2 | 5 | 352 | 60 | 406 | 2.23e-90 | 277 |
Msa1133950 | AT2G34590.1 | 42.042 | 333 | 185 | 2 | 22 | 352 | 80 | 406 | 2.05e-89 | 275 |
Msa1133950 | AT1G55510.1 | 36.337 | 344 | 210 | 5 | 8 | 348 | 10 | 347 | 6.63e-70 | 223 |
Msa1133950 | AT3G13450.1 | 35.224 | 335 | 210 | 4 | 15 | 348 | 25 | 353 | 1.64e-68 | 219 |
Msa1133950 | AT4G15560.1 | 24.727 | 275 | 187 | 7 | 19 | 290 | 390 | 647 | 3.40e-12 | 68.2 |
Msa1133950 | AT3G21500.3 | 26.549 | 226 | 151 | 6 | 68 | 290 | 392 | 605 | 3.19e-11 | 65.1 |
Msa1133950 | AT3G21500.1 | 26.549 | 226 | 151 | 6 | 68 | 290 | 391 | 604 | 3.68e-11 | 65.1 |
Msa1133950 | AT3G21500.2 | 26.549 | 226 | 151 | 6 | 68 | 290 | 392 | 605 | 4.14e-11 | 64.7 |
Find 129 sgRNAs with CRISPR-Local
Find 532 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCACAAAGGTTATTAATTTA+AGG | 0.162693 | 7_4:+262035 | Msa1133950:intron |
TTTATAATTCCCAGCATATC+TGG | 0.227146 | 7_4:+262655 | Msa1133950:three_prime_UTR |
TCATGTCTTGGTTAGTTCTT+TGG | 0.228149 | 7_4:+262468 | Msa1133950:three_prime_UTR |
AATATGCAGGCTGGGTTTAC+TGG | 0.232671 | 7_4:+259161 | Msa1133950:intron |
ATGCCCTGGGTTGAAAGTTT+TGG | 0.247026 | 7_4:+261185 | Msa1133950:CDS |
AGAACTAGATCGATTAATTT+AGG | 0.262380 | 7_4:-262437 | None:intergenic |
GTTTACTTAAAGCTGCTATA+AGG | 0.289090 | 7_4:+261235 | Msa1133950:CDS |
TCTTGGTATGGCTCATGCCC+TGG | 0.309803 | 7_4:+261171 | Msa1133950:CDS |
TCACCCATCAAGAAGACTTT+AGG | 0.312229 | 7_4:-255641 | None:intergenic |
AAATGTGTAGGATAATAATT+TGG | 0.314166 | 7_4:-254868 | None:intergenic |
TTAGATTTCCAAGGGACTAT+TGG | 0.314457 | 7_4:+257518 | Msa1133950:intron |
AAGTTGGCCTTTGCAGTTTC+CGG | 0.316568 | 7_4:-262821 | None:intergenic |
GGAGTTGGTGCTGCTTACTA+TGG | 0.330288 | 7_4:+259188 | Msa1133950:CDS |
CATGCCTTATGCAGCAAATC+TGG | 0.332687 | 7_4:+262240 | Msa1133950:CDS |
TCAAGAACTTCGGCAGAAAC+AGG | 0.334442 | 7_4:-261423 | None:intergenic |
CAGAAAAGAATAATGAATTC+TGG | 0.338933 | 7_4:+254949 | Msa1133950:five_prime_UTR |
GAAGACTGAAAATTAAATTC+TGG | 0.349384 | 7_4:+262907 | Msa1133950:three_prime_UTR |
AATGGTTGGCTTTGCTCTAA+AGG | 0.349744 | 7_4:+261630 | Msa1133950:CDS |
TCATTGATTCTGTCAGGCTT+TGG | 0.355325 | 7_4:+262561 | Msa1133950:three_prime_UTR |
TCAAGGAAAACTACAGGATC+AGG | 0.356678 | 7_4:-261261 | None:intergenic |
CTTTCCAGATTTGCTGCATA+AGG | 0.357769 | 7_4:-262244 | None:intergenic |
CAGGCTGGGTTTACTGGGAT+TGG | 0.358479 | 7_4:+259167 | Msa1133950:intron |
TAATTTGTTTGCATTGCGTT+TGG | 0.365019 | 7_4:+262930 | Msa1133950:three_prime_UTR |
TCCGATGGGAAGGCAGAAAC+TGG | 0.372273 | 7_4:-261448 | None:intergenic |
TCTCTCTTCTTCCGCTAAAC+AGG | 0.373627 | 7_4:+255482 | Msa1133950:CDS |
AATGTACCTATTGTATTTAG+AGG | 0.374366 | 7_4:+260947 | Msa1133950:CDS |
GCACCGGTGGAGAGAATTGC+CGG | 0.381050 | 7_4:+262205 | Msa1133950:CDS |
GGGTTTACTGGGATTGGAGT+TGG | 0.388394 | 7_4:+259173 | Msa1133950:CDS |
AAGGAATCAATCAAGATGTT+AGG | 0.392916 | 7_4:+255318 | Msa1133950:exon |
CGAGCATCTTCAGATGAATA+TGG | 0.394225 | 7_4:-261210 | None:intergenic |
TAAGATCAAATCGACGTGAT+AGG | 0.407286 | 7_4:-263052 | None:intergenic |
TGCAGCAAATCTGGAAAGAT+TGG | 0.409248 | 7_4:+262249 | Msa1133950:CDS |
TTATGCAGTGTTATGCATCT+TGG | 0.410920 | 7_4:+261154 | Msa1133950:intron |
AATGGTGCTGCTGCTGGTGT+TGG | 0.415359 | 7_4:+260974 | Msa1133950:CDS |
TCAGAGTTGGTGAGTATCAA+TGG | 0.422592 | 7_4:-255034 | None:intergenic |
AATTTGTTTGCATTGCGTTT+GGG | 0.423865 | 7_4:+262931 | Msa1133950:three_prime_UTR |
TCTGTCATCGAGGAGAGTTT+TGG | 0.424908 | 7_4:+262172 | Msa1133950:CDS |
TTTCCTGACAGAAGCATTGA+TGG | 0.431540 | 7_4:-262083 | None:intergenic |
AAATCAAATTACATGTCTGC+TGG | 0.434500 | 7_4:+260917 | Msa1133950:CDS |
TTTACTTAAAGCTGCTATAA+GGG | 0.435542 | 7_4:+261236 | Msa1133950:CDS |
GAACATCCTCCCAGATATGC+TGG | 0.451781 | 7_4:-262665 | None:intergenic |
TTGGGTCCTCTAAATACAAT+AGG | 0.453035 | 7_4:-260953 | None:intergenic |
CGATCCTAAAGTCTTCTTGA+TGG | 0.454138 | 7_4:+255637 | Msa1133950:CDS |
TCTCAGAAGCAGGCTTATAC+CGG | 0.458262 | 7_4:-262976 | None:intergenic |
GGACCCAATGGTGCTGCTGC+TGG | 0.458395 | 7_4:+260968 | Msa1133950:CDS |
TTCAACTGTCACCAGTCTGT+TGG | 0.461416 | 7_4:-262107 | None:intergenic |
CTTGGTATGGCTCATGCCCT+GGG | 0.468165 | 7_4:+261172 | Msa1133950:CDS |
TTGAATTGTGGCTGTTATCC+CGG | 0.472385 | 7_4:+262957 | Msa1133950:three_prime_UTR |
AGGTTGTGGTGGAAATTTGA+GGG | 0.475922 | 7_4:-262518 | None:intergenic |
AATGTCATAAACTCCACAAC+AGG | 0.479865 | 7_4:-259218 | None:intergenic |
GAAAGTGTGAAAAGGCAGAT+TGG | 0.484065 | 7_4:+263075 | Msa1133950:three_prime_UTR |
AAGGGACTATTGGAGAAGTA+TGG | 0.485928 | 7_4:+257528 | Msa1133950:CDS |
ATATGCAGGCTGGGTTTACT+GGG | 0.487916 | 7_4:+259162 | Msa1133950:intron |
CAGATTTGCTGCATAAGGCA+TGG | 0.501282 | 7_4:-262239 | None:intergenic |
GAGATGTCTGAATGCGGAAA+AGG | 0.501518 | 7_4:-255463 | None:intergenic |
GACATTTAACTTCTCCATGC+AGG | 0.502562 | 7_4:+259235 | Msa1133950:CDS |
CAGTGTTATGCATCTTGGTA+TGG | 0.510583 | 7_4:+261159 | Msa1133950:intron |
ACACCAGCAGCAGCACCATT+GGG | 0.513248 | 7_4:-260971 | None:intergenic |
GCCCCGGCAATTCTCTCCAC+CGG | 0.513647 | 7_4:-262208 | None:intergenic |
CCACCATCAATGCTTCTGTC+AGG | 0.514146 | 7_4:+262080 | Msa1133950:CDS |
ATGCCACAGATCTGTGCCTA+TGG | 0.514735 | 7_4:+262405 | Msa1133950:CDS |
CTTAACAGATTGAGAGAGAA+GGG | 0.517313 | 7_4:+261578 | Msa1133950:intron |
TGATCTTAGAAAGTGTGAAA+AGG | 0.521086 | 7_4:+263067 | Msa1133950:three_prime_UTR |
ATTTAGGCAGTTGCAGCCAT+AGG | 0.522619 | 7_4:-262421 | None:intergenic |
TTATAATTCCCAGCATATCT+GGG | 0.527240 | 7_4:+262656 | Msa1133950:three_prime_UTR |
AACACCAGCAGCAGCACCAT+TGG | 0.529263 | 7_4:-260972 | None:intergenic |
TCCTTCAATTTAGATTTCCA+AGG | 0.535088 | 7_4:+257509 | Msa1133950:intron |
GGAGTGTCGAGAACCCTCTC+AGG | 0.535813 | 7_4:-257552 | None:intergenic |
CAAGATATATTTAACTGTGT+GGG | 0.539303 | 7_4:+262872 | Msa1133950:three_prime_UTR |
AGATTTGCTGCATAAGGCAT+GGG | 0.544500 | 7_4:-262238 | None:intergenic |
ATACTTCTCCAATAGTCCCT+TGG | 0.545557 | 7_4:-257526 | None:intergenic |
TCCAGTTTCTGCCTTCCCAT+CGG | 0.546005 | 7_4:+261447 | Msa1133950:CDS |
GGGTTTCCTCAGCATGGTGT+TGG | 0.548315 | 7_4:+262133 | Msa1133950:CDS |
TTATAGGTTGGAGAATATCA+AGG | 0.548317 | 7_4:+257383 | Msa1133950:intron |
AGAATATCAAGGTGCATACA+AGG | 0.548665 | 7_4:+257394 | Msa1133950:CDS |
GGAAAGATTGGCTGTCCCAC+AGG | 0.549518 | 7_4:+262261 | Msa1133950:CDS |
GATCCTAAAGTCTTCTTGAT+GGG | 0.550617 | 7_4:+255638 | Msa1133950:CDS |
CAACAAACAAACCTGTTTAG+CGG | 0.555702 | 7_4:-255493 | None:intergenic |
AGACTGGTGACAGTTGAAGA+AGG | 0.558832 | 7_4:+262112 | Msa1133950:CDS |
ACAAGATATATTTAACTGTG+TGG | 0.565114 | 7_4:+262871 | Msa1133950:three_prime_UTR |
GCTTAACAGATTGAGAGAGA+AGG | 0.566225 | 7_4:+261577 | Msa1133950:intron |
AAAAGGATGCACTAAAGTAT+GGG | 0.566640 | 7_4:-263001 | None:intergenic |
CCTTCAATTTAGATTTCCAA+GGG | 0.567285 | 7_4:+257510 | Msa1133950:intron |
AATCAAATTACATGTCTGCT+GGG | 0.569255 | 7_4:+260918 | Msa1133950:CDS |
GAGGTTGTGGTGGAAATTTG+AGG | 0.570350 | 7_4:-262519 | None:intergenic |
AGTCTTCTTGATGGGTGAAG+AGG | 0.572562 | 7_4:+255646 | Msa1133950:CDS |
CTATGGTCTAAAGCCTGTTG+TGG | 0.572678 | 7_4:+259205 | Msa1133950:CDS |
GGAACGAAAAGTTTCAGAGT+TGG | 0.575482 | 7_4:-255047 | None:intergenic |
AGTATGGGTATCTCAGAAGC+AGG | 0.580296 | 7_4:-262986 | None:intergenic |
CTCAGAAGCAGGCTTATACC+GGG | 0.584510 | 7_4:-262975 | None:intergenic |
AACATCCTCCCAGATATGCT+GGG | 0.589448 | 7_4:-262664 | None:intergenic |
CAAGAACTTCGGCAGAAACA+GGG | 0.590845 | 7_4:-261422 | None:intergenic |
GTAGAGGAATTCGAATACTT+AGG | 0.593492 | 7_4:-254986 | None:intergenic |
GAAACTGGAATCAAGAACTT+CGG | 0.593707 | 7_4:-261433 | None:intergenic |
GCGTTTGGGACTTTGAATTG+TGG | 0.594726 | 7_4:+262945 | Msa1133950:three_prime_UTR |
GTTAGGTGTTATAAGAAACA+AGG | 0.596856 | 7_4:+255335 | Msa1133950:CDS |
CCTGACAGAAGCATTGATGG+TGG | 0.602274 | 7_4:-262080 | None:intergenic |
GTGCCAAAACTTTCAACCCA+GGG | 0.603446 | 7_4:-261188 | None:intergenic |
CAAGGAAAACTACAGGATCA+GGG | 0.604349 | 7_4:-261260 | None:intergenic |
GACTGGTGACAGTTGAAGAA+GGG | 0.606152 | 7_4:+262113 | Msa1133950:CDS |
GAGATAAACACTAACCTGCA+TGG | 0.607390 | 7_4:-259249 | None:intergenic |
TGTCAGGAAAACCAACAGAC+TGG | 0.614276 | 7_4:+262096 | Msa1133950:CDS |
CAGCCATAGGCACAGATCTG+TGG | 0.618473 | 7_4:-262408 | None:intergenic |
TAGCATACCGGAAACTGCAA+AGG | 0.619213 | 7_4:+262814 | Msa1133950:three_prime_UTR |
AGGCATGGGAACATCAGCCC+CGG | 0.619316 | 7_4:-262224 | None:intergenic |
GGAGAAGTATGGTCCTGAGA+GGG | 0.619724 | 7_4:+257539 | Msa1133950:CDS |
ATTGTATTTAGAGGACCCAA+TGG | 0.620504 | 7_4:+260956 | Msa1133950:CDS |
GAAGAAGGGTTTCCTCAGCA+TGG | 0.620750 | 7_4:+262127 | Msa1133950:CDS |
ACTCAAAACAGCAAGCAAGT+TGG | 0.621959 | 7_4:-262837 | None:intergenic |
GGTGCCAAAACTTTCAACCC+AGG | 0.622618 | 7_4:-261189 | None:intergenic |
CATCAAGAAGACTTTAGGAT+CGG | 0.623232 | 7_4:-255636 | None:intergenic |
CCTTCCCATCGGAAAAGCAA+AGG | 0.627357 | 7_4:+261458 | Msa1133950:CDS |
GCTGAGACACTAGCAAAGGA+AGG | 0.630656 | 7_4:+261913 | Msa1133950:CDS |
GGCTGCTGAGACACTAGCAA+AGG | 0.630698 | 7_4:+261909 | Msa1133950:intron |
TTGATGGTGGCTCGATCAAG+CGG | 0.636023 | 7_4:-262067 | None:intergenic |
TGGTGGCTCGATCAAGCGGT+CGG | 0.637314 | 7_4:-262063 | None:intergenic |
CAAGAAGACTTTAGGATCGG+CGG | 0.641433 | 7_4:-255633 | None:intergenic |
TGGCTATCTTGATGCACCGG+TGG | 0.641507 | 7_4:+262192 | Msa1133950:CDS |
ACCGGTGGAGAGAATTGCCG+GGG | 0.643645 | 7_4:+262207 | Msa1133950:CDS |
TATTCATCTGAAGATGCTCG+TGG | 0.654209 | 7_4:+261213 | Msa1133950:CDS |
AAAGGAAGGAATCAGTGCTG+AGG | 0.656553 | 7_4:+261927 | Msa1133950:CDS |
TGGAGAAGTATGGTCCTGAG+AGG | 0.669482 | 7_4:+257538 | Msa1133950:CDS |
TGTCTGAATGCGGAAAAGGA+AGG | 0.671745 | 7_4:-255459 | None:intergenic |
TGATAACAATGACACAAGAG+AGG | 0.681703 | 7_4:+262705 | Msa1133950:three_prime_UTR |
TCAGCGCCAACACCATGCTG+AGG | 0.686283 | 7_4:-262139 | None:intergenic |
AGAAGAGAGATGTCTGAATG+CGG | 0.692625 | 7_4:-255469 | None:intergenic |
TAATTCCCAGCATATCTGGG+AGG | 0.718916 | 7_4:+262659 | Msa1133950:three_prime_UTR |
AATCTGTGCATCTGTCATCG+AGG | 0.746298 | 7_4:+262162 | Msa1133950:CDS |
TCTCGACACTCCCATCACTG+AGG | 0.757157 | 7_4:+257563 | Msa1133950:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAATAATAATAATATTTA+TGG | - | chr7_4:255387-255406 | None:intergenic | 0.0% |
!! | AAAAAAATAGCAAAAATATT+CGG | + | chr7_4:254904-254923 | Msa1133950:five_prime_UTR | 10.0% |
!!! | AATATTTAGAATTTTTGTTA+TGG | + | chr7_4:256327-256346 | Msa1133950:intron | 10.0% |
!!! | AAAAGATTTTATGAATTTTA+AGG | + | chr7_4:258212-258231 | Msa1133950:intron | 10.0% |
!!! | TTTAAAGAATTTAAAATTCT+TGG | + | chr7_4:258823-258842 | Msa1133950:intron | 10.0% |
!!! | TTTTCTTATAAAAAATGTGT+AGG | - | chr7_4:254883-254902 | None:intergenic | 15.0% |
!!! | TTTTTTTCAATTAAGATTAG+AGG | + | chr7_4:255967-255986 | Msa1133950:intron | 15.0% |
!!! | TTTTTTCAATTAAGATTAGA+GGG | + | chr7_4:255968-255987 | Msa1133950:intron | 15.0% |
!!! | GTTATTACAATATTTTAGTT+AGG | - | chr7_4:256625-256644 | None:intergenic | 15.0% |
!! | TATGTTCATTTCAATATAAT+TGG | + | chr7_4:256893-256912 | Msa1133950:intron | 15.0% |
!!! | TCATTTTCTAATGTTTATTT+TGG | + | chr7_4:257350-257369 | Msa1133950:intron | 15.0% |
!! | TATAAAAATGTAAACATGAA+AGG | - | chr7_4:257674-257693 | None:intergenic | 15.0% |
!!! | AATTTGTTCATTTTATTAGA+TGG | - | chr7_4:257782-257801 | None:intergenic | 15.0% |
!!! | TTTACATCATAAGATTTTAA+AGG | + | chr7_4:258166-258185 | Msa1133950:intron | 15.0% |
!!! | TAAGATTTTAAAGGATTTTA+TGG | + | chr7_4:258175-258194 | Msa1133950:intron | 15.0% |
!!! | TTTAATAAATTAGATTTTGC+TGG | - | chr7_4:258573-258592 | None:intergenic | 15.0% |
!!! | TGTTTTAAATTTTGATATTC+AGG | + | chr7_4:260528-260547 | Msa1133950:intron | 15.0% |
!!! | TTATATATTTGAAGTAAAGT+CGG | + | chr7_4:261820-261839 | Msa1133950:intron | 15.0% |
!!! | AACTTTTTTTTACTTTGTTT+AGG | + | chr7_4:261888-261907 | Msa1133950:intron | 15.0% |
!!! | ATTATTTTTGGTAACATAAA+GGG | - | chr7_4:262497-262516 | None:intergenic | 15.0% |
!!! | AATTATTTTTGGTAACATAA+AGG | - | chr7_4:262498-262517 | None:intergenic | 15.0% |
!! | AAATGTGTAGGATAATAATT+TGG | - | chr7_4:254871-254890 | None:intergenic | 20.0% |
!!! | TTTTTCAATTAAGATTAGAG+GGG | + | chr7_4:255969-255988 | Msa1133950:intron | 20.0% |
!! | TAAGCTATAAGCTAAAAAAT+GGG | + | chr7_4:256139-256158 | Msa1133950:intron | 20.0% |
!! | AACAAAAAATCTGAAAATGT+TGG | - | chr7_4:256548-256567 | None:intergenic | 20.0% |
!! | TATTATATATGTCGGAATAT+AGG | - | chr7_4:256856-256875 | None:intergenic | 20.0% |
!!! | TTTTGGTTGTATTTGATTAT+AGG | + | chr7_4:257367-257386 | Msa1133950:intron | 20.0% |
!! | AAATGAACAAATTCAAACTT+TGG | + | chr7_4:257789-257808 | Msa1133950:intron | 20.0% |
!!! | GTATTGGATTAAGATTTTAA+AGG | + | chr7_4:258037-258056 | Msa1133950:intron | 20.0% |
!!! | TCAGATTTAAAAGATTTTGT+AGG | + | chr7_4:258082-258101 | Msa1133950:intron | 20.0% |
!!! | ATTTTCAATTTGGATTTCAA+TGG | + | chr7_4:258142-258161 | Msa1133950:intron | 20.0% |
!!! | TTTTTATGATAGATAAAGAG+AGG | + | chr7_4:258307-258326 | Msa1133950:intron | 20.0% |
!!! | TTTTATGATAGATAAAGAGA+GGG | + | chr7_4:258308-258327 | Msa1133950:intron | 20.0% |
!! | TTAATTATGAAAAAGTCTTG+TGG | - | chr7_4:258752-258771 | None:intergenic | 20.0% |
!! | ATTCCTGGTAAAAAAAAAAA+AGG | + | chr7_4:259083-259102 | Msa1133950:intron | 20.0% |
!!! | AATCCTTTTTTTTTTTTACC+AGG | - | chr7_4:259089-259108 | None:intergenic | 20.0% |
!! | ATAATGTTCATTAAATATGC+AGG | + | chr7_4:259148-259167 | Msa1133950:intron | 20.0% |
!!! | TGTGTTAATTTTACATCTTT+TGG | + | chr7_4:259308-259327 | Msa1133950:intron | 20.0% |
!! | TGTATAATCATCATAAATTC+AGG | + | chr7_4:259740-259759 | Msa1133950:intron | 20.0% |
!! | GCAACAATAAAATTAAACAA+TGG | + | chr7_4:260011-260030 | Msa1133950:intron | 20.0% |
!! | TAAAACAAATAGAATTGACA+AGG | - | chr7_4:260515-260534 | None:intergenic | 20.0% |
!!! | ATTGATAAAAATCGCTTTTA+GGG | - | chr7_4:260650-260669 | None:intergenic | 20.0% |
!! | TAAAATTAATTGTGTGAAGT+CGG | + | chr7_4:260741-260760 | Msa1133950:intron | 20.0% |
!! | AGATGACATAATGATAAAAT+GGG | - | chr7_4:260852-260871 | None:intergenic | 20.0% |
!! | AAGATGACATAATGATAAAA+TGG | - | chr7_4:260853-260872 | None:intergenic | 20.0% |
!!! | AAAAGAGGACTATAATTTTT+TGG | + | chr7_4:261786-261805 | Msa1133950:intron | 20.0% |
!! | CTTAAATTAATAACCTTTGT+GGG | - | chr7_4:262037-262056 | None:intergenic | 20.0% |
!! | TTTCTTAAATATCACTTCTA+AGG | + | chr7_4:262289-262308 | Msa1133950:intron | 20.0% |
!!! | AAATTTGAGGGAATTATTTT+TGG | - | chr7_4:262509-262528 | None:intergenic | 20.0% |
! | CAGAAAAGAATAATGAATTC+TGG | + | chr7_4:254949-254968 | Msa1133950:five_prime_UTR | 25.0% |
! | TGAAAAAAAAAACGAGAGAT+CGG | - | chr7_4:255139-255158 | None:intergenic | 25.0% |
!! | TGTTGAGATTTTTCTTTCTT+AGG | + | chr7_4:255248-255267 | Msa1133950:intron | 25.0% |
!! | ATCATTTTCAGAATCTTCTT+CGG | + | chr7_4:255436-255455 | Msa1133950:intron | 25.0% |
! | ATAAGTTATATCAGCCTTTA+CGG | - | chr7_4:255823-255842 | None:intergenic | 25.0% |
!! | ATTTTACCAAACACTACAAA+GGG | - | chr7_4:255883-255902 | None:intergenic | 25.0% |
!! | AATTTTACCAAACACTACAA+AGG | - | chr7_4:255884-255903 | None:intergenic | 25.0% |
! | GTAGTGTTTGGTAAAATTAA+CGG | + | chr7_4:255886-255905 | Msa1133950:intron | 25.0% |
!!! | CATTTTTTAGCTTATAGCTT+AGG | - | chr7_4:256140-256159 | None:intergenic | 25.0% |
! | CTAAGCTATAAGCTAAAAAA+TGG | + | chr7_4:256138-256157 | Msa1133950:intron | 25.0% |
!! | TGTTATGGTAATTTTGCAAA+TGG | + | chr7_4:256342-256361 | Msa1133950:intron | 25.0% |
! | TAATGTAACACAAAAGTCAA+AGG | - | chr7_4:256484-256503 | None:intergenic | 25.0% |
!!! | CAGTTAGTTTTACGAAAATA+GGG | - | chr7_4:256584-256603 | None:intergenic | 25.0% |
!!! | TCAGTTAGTTTTACGAAAAT+AGG | - | chr7_4:256585-256604 | None:intergenic | 25.0% |
!! | AGATTTTTCCTAATAGTAGT+AGG | + | chr7_4:256645-256664 | Msa1133950:intron | 25.0% |
! | TTCCGACATATATAATATGA+CGG | + | chr7_4:256859-256878 | Msa1133950:intron | 25.0% |
!!! | ATATGACCATTGACTTAATT+TGG | + | chr7_4:257122-257141 | Msa1133950:intron | 25.0% |
! | AATTCATGCATGTCTTTATA+CGG | - | chr7_4:257325-257344 | None:intergenic | 25.0% |
! | AAAATGTAAACATGAAAGGA+AGG | - | chr7_4:257670-257689 | None:intergenic | 25.0% |
! | CGAAAAATGTAACAAAAAGT+GGG | - | chr7_4:257979-257998 | None:intergenic | 25.0% |
!!! | CCACTTTTTGTTACATTTTT+CGG | + | chr7_4:257977-257996 | Msa1133950:intron | 25.0% |
!! | GTTAGTTTATTTCCATCTTA+GGG | + | chr7_4:258011-258030 | Msa1133950:intron | 25.0% |
! | TTAGTTTATTTCCATCTTAG+GGG | + | chr7_4:258012-258031 | Msa1133950:intron | 25.0% |
!!! | CATGATTTTAAAAGACTATC+AGG | + | chr7_4:258119-258138 | Msa1133950:intron | 25.0% |
! | TTTATGATAGATAAAGAGAG+GGG | + | chr7_4:258309-258328 | Msa1133950:intron | 25.0% |
! | ATGAAGACATAAGATTTCTT+GGG | - | chr7_4:258504-258523 | None:intergenic | 25.0% |
! | ATCACTTAAAAAAAGTCTCA+TGG | - | chr7_4:258627-258646 | None:intergenic | 25.0% |
! | GCAATTTAAAAAAAGTCTTG+TGG | - | chr7_4:258710-258729 | None:intergenic | 25.0% |
! | AGAAATTCACTAATAATTCC+TGG | + | chr7_4:259068-259087 | Msa1133950:intron | 25.0% |
!!! | AAAGTTTTTTCGTGAAAAGT+TGG | + | chr7_4:259395-259414 | Msa1133950:intron | 25.0% |
! | TAAGCAAACTAATCATCATT+TGG | - | chr7_4:259501-259520 | None:intergenic | 25.0% |
!!! | AAATGATGATTAGTTTGCTT+AGG | + | chr7_4:259500-259519 | Msa1133950:intron | 25.0% |
! | TTCTCGATATAAAATATTCG+AGG | - | chr7_4:259585-259604 | None:intergenic | 25.0% |
!! | AATCTGTAGTTTGTATCTTT+AGG | - | chr7_4:260252-260271 | None:intergenic | 25.0% |
! | ATCATCACCAATTAATTATG+TGG | + | chr7_4:260350-260369 | Msa1133950:intron | 25.0% |
! | CTAAACACCACATAATTAAT+TGG | - | chr7_4:260360-260379 | None:intergenic | 25.0% |
! | ATAAATCATCACCAATTATG+TGG | + | chr7_4:260405-260424 | Msa1133950:intron | 25.0% |
! | TAGGGTGTGATTATTAATAT+GGG | - | chr7_4:260632-260651 | None:intergenic | 25.0% |
! | TTAGGGTGTGATTATTAATA+TGG | - | chr7_4:260633-260652 | None:intergenic | 25.0% |
!!! | CATTGATAAAAATCGCTTTT+AGG | - | chr7_4:260651-260670 | None:intergenic | 25.0% |
! | AAAATTAATTGTGTGAAGTC+GGG | + | chr7_4:260742-260761 | Msa1133950:intron | 25.0% |
! | AAAATGGGATGAAATAGATA+GGG | - | chr7_4:260837-260856 | None:intergenic | 25.0% |
! | TAAAATGGGATGAAATAGAT+AGG | - | chr7_4:260838-260857 | None:intergenic | 25.0% |
! | AATGTACCTATTGTATTTAG+AGG | + | chr7_4:260947-260966 | Msa1133950:CDS | 25.0% |
! | TTTACTTAAAGCTGCTATAA+GGG | + | chr7_4:261236-261255 | Msa1133950:CDS | 25.0% |
! | TAAAAAATACAAGAAAGGAC+TGG | - | chr7_4:261511-261530 | None:intergenic | 25.0% |
! | GACACTAAAAAATACAAGAA+AGG | - | chr7_4:261516-261535 | None:intergenic | 25.0% |
! | TAGAATACAAAACGATCTTA+GGG | - | chr7_4:261664-261683 | None:intergenic | 25.0% |
! | AAACAATAACAGAAGAAAAG+AGG | + | chr7_4:261771-261790 | Msa1133950:intron | 25.0% |
!!! | ATGTTTTTTTTTACCCACAA+AGG | + | chr7_4:262021-262040 | Msa1133950:intron | 25.0% |
! | CCTTAAATTAATAACCTTTG+TGG | - | chr7_4:262038-262057 | None:intergenic | 25.0% |
! | CCACAAAGGTTATTAATTTA+AGG | + | chr7_4:262035-262054 | Msa1133950:intron | 25.0% |
! | ATTTAAGAAACATTACCTGT+GGG | - | chr7_4:262279-262298 | None:intergenic | 25.0% |
! | TATTTAAGAAACATTACCTG+TGG | - | chr7_4:262280-262299 | None:intergenic | 25.0% |
! | AGAACTAGATCGATTAATTT+AGG | - | chr7_4:262440-262459 | None:intergenic | 25.0% |
!!! | TTCTGAAATTTTTCATGTCT+TGG | + | chr7_4:262456-262475 | Msa1133950:three_prime_UTR | 25.0% |
! | ACAAGATATATTTAACTGTG+TGG | + | chr7_4:262871-262890 | Msa1133950:three_prime_UTR | 25.0% |
! | CAAGATATATTTAACTGTGT+GGG | + | chr7_4:262872-262891 | Msa1133950:three_prime_UTR | 25.0% |
! | GAAGACTGAAAATTAAATTC+TGG | + | chr7_4:262907-262926 | Msa1133950:three_prime_UTR | 25.0% |
! | AACGTAATTGTGTCTAAAAA+AGG | - | chr7_4:263021-263040 | None:intergenic | 25.0% |
!!! | TTTTTTAGACACAATTACGT+TGG | + | chr7_4:263020-263039 | Msa1133950:three_prime_UTR | 25.0% |
AAGAGAAAATGAATCGAGAA+AGG | - | chr7_4:255090-255109 | None:intergenic | 30.0% | |
GATCGGAAAATGAAAAAACA+CGG | - | chr7_4:255122-255141 | None:intergenic | 30.0% | |
CACAAAAACACAGTGAAATT+AGG | - | chr7_4:255164-255183 | None:intergenic | 30.0% | |
TGTAGCAAAAAAAACCTAAG+TGG | - | chr7_4:255211-255230 | None:intergenic | 30.0% | |
! | AATCTATTTTGCAGCAATCA+AGG | + | chr7_4:255299-255318 | Msa1133950:intron | 30.0% |
AAGGAATCAATCAAGATGTT+AGG | + | chr7_4:255318-255337 | Msa1133950:exon | 30.0% | |
! | GTTAGGTGTTATAAGAAACA+AGG | + | chr7_4:255335-255354 | Msa1133950:CDS | 30.0% |
TCTGAAGATTACTTGTACTA+CGG | - | chr7_4:255701-255720 | None:intergenic | 30.0% | |
AAGTAATCTTCAGATTTCGT+AGG | + | chr7_4:255707-255726 | Msa1133950:intron | 30.0% | |
AGTAATCTTCAGATTTCGTA+GGG | + | chr7_4:255708-255727 | Msa1133950:intron | 30.0% | |
!! | TTTCAAGTTTCATCCTTGAT+TGG | + | chr7_4:256201-256220 | Msa1133950:intron | 30.0% |
TAATACTCCCATAGATTGTA+TGG | + | chr7_4:256252-256271 | Msa1133950:intron | 30.0% | |
CACTAAACCATACAATCTAT+GGG | - | chr7_4:256262-256281 | None:intergenic | 30.0% | |
TCACTAAACCATACAATCTA+TGG | - | chr7_4:256263-256282 | None:intergenic | 30.0% | |
GTCTGATATTTGATGAGATA+TGG | - | chr7_4:256446-256465 | None:intergenic | 30.0% | |
ACTATCTACCTACTACTATT+AGG | - | chr7_4:256656-256675 | None:intergenic | 30.0% | |
! | GGTTAATAAAGTATCCTCAA+AGG | - | chr7_4:256776-256795 | None:intergenic | 30.0% |
TCCGACATATATAATATGAC+GGG | + | chr7_4:256860-256879 | Msa1133950:intron | 30.0% | |
AAAGGACCAAATTAAGTCAA+TGG | - | chr7_4:257131-257150 | None:intergenic | 30.0% | |
AGATGAATTAAGCAAACGAA+AGG | - | chr7_4:257149-257168 | None:intergenic | 30.0% | |
!!! | ATCTTTCAGTTTTAGAGTTG+AGG | + | chr7_4:257165-257184 | Msa1133950:intron | 30.0% |
ATAAGCAAAGACATTGTAAG+GGG | - | chr7_4:257256-257275 | None:intergenic | 30.0% | |
CATAAGCAAAGACATTGTAA+GGG | - | chr7_4:257257-257276 | None:intergenic | 30.0% | |
TCATAAGCAAAGACATTGTA+AGG | - | chr7_4:257258-257277 | None:intergenic | 30.0% | |
! | GTATACACTAAACCATTTTC+AGG | - | chr7_4:257303-257322 | None:intergenic | 30.0% |
GGTTGTATTTGATTATAGGT+TGG | + | chr7_4:257371-257390 | Msa1133950:intron | 30.0% | |
! | TTATAGGTTGGAGAATATCA+AGG | + | chr7_4:257383-257402 | Msa1133950:intron | 30.0% |
AAGGAAATAACTTGAACAAG+TGG | - | chr7_4:257434-257453 | None:intergenic | 30.0% | |
TCCTTCAATTTAGATTTCCA+AGG | + | chr7_4:257509-257528 | Msa1133950:intron | 30.0% | |
CCTTCAATTTAGATTTCCAA+GGG | + | chr7_4:257510-257529 | Msa1133950:intron | 30.0% | |
AGAAAAATAACCTCAGTGAT+GGG | - | chr7_4:257576-257595 | None:intergenic | 30.0% | |
AAGAAAAATAACCTCAGTGA+TGG | - | chr7_4:257577-257596 | None:intergenic | 30.0% | |
!! | ACTTTGGTAATGTAATGTGA+TGG | + | chr7_4:257805-257824 | Msa1133950:intron | 30.0% |
CCGAAAAATGTAACAAAAAG+TGG | - | chr7_4:257980-257999 | None:intergenic | 30.0% | |
!! | GGTTAGTTTATTTCCATCTT+AGG | + | chr7_4:258010-258029 | Msa1133950:intron | 30.0% |
TAGTTTATTTCCATCTTAGG+GGG | + | chr7_4:258013-258032 | Msa1133950:intron | 30.0% | |
! | GACTATCAGGATTTTCAATT+TGG | + | chr7_4:258132-258151 | Msa1133950:intron | 30.0% |
CATGAAGACATAAGATTTCT+TGG | - | chr7_4:258505-258524 | None:intergenic | 30.0% | |
! | TAGATTTTGCTGGATTTTGT+GGG | - | chr7_4:258563-258582 | None:intergenic | 30.0% |
! | TTAGATTTTGCTGGATTTTG+TGG | - | chr7_4:258564-258583 | None:intergenic | 30.0% |
TGTGTTTGGATGATGTAATT+TGG | + | chr7_4:258796-258815 | Msa1133950:intron | 30.0% | |
TTATATTGCAGCTGTTTACA+TGG | + | chr7_4:259108-259127 | Msa1133950:intron | 30.0% | |
TTGCACACTGAATTTAAGAA+AGG | - | chr7_4:259283-259302 | None:intergenic | 30.0% | |
TATTCTTATCACACAGAAGA+CGG | - | chr7_4:259456-259475 | None:intergenic | 30.0% | |
CTAATCATCATTTGGAAACT+CGG | - | chr7_4:259493-259512 | None:intergenic | 30.0% | |
AAATTAGAAGGATAGTGATG+TGG | + | chr7_4:259841-259860 | Msa1133950:intron | 30.0% | |
! | TTAAAGCATTTCTGTATGCA+TGG | + | chr7_4:260183-260202 | Msa1133950:intron | 30.0% |
! | TGTAGTTTGTATCTTTAGGA+GGG | - | chr7_4:260248-260267 | None:intergenic | 30.0% |
AGATACAAACTACAGATTTG+TGG | + | chr7_4:260254-260273 | Msa1133950:intron | 30.0% | |
!!! | TGGTTAGTTTTATAGTCACA+TGG | + | chr7_4:260432-260451 | Msa1133950:intron | 30.0% |
!!! | GTTTGTTGGTATTTTTTTGC+CGG | + | chr7_4:260480-260499 | Msa1133950:intron | 30.0% |
ATTGACAAGGAATGATATTC+CGG | - | chr7_4:260502-260521 | None:intergenic | 30.0% | |
TTATTAATATGGGTATGCAC+AGG | - | chr7_4:260622-260641 | None:intergenic | 30.0% | |
AAATCAAATTACATGTCTGC+TGG | + | chr7_4:260917-260936 | Msa1133950:CDS | 30.0% | |
AATCAAATTACATGTCTGCT+GGG | + | chr7_4:260918-260937 | Msa1133950:CDS | 30.0% | |
GTTTCATAGAAGAAAATGTC+AGG | - | chr7_4:261026-261045 | None:intergenic | 30.0% | |
CATAACGAAAGAAAAACAGT+GGG | - | chr7_4:261074-261093 | None:intergenic | 30.0% | |
TCATAACGAAAGAAAAACAG+TGG | - | chr7_4:261075-261094 | None:intergenic | 30.0% | |
GTTTACTTAAAGCTGCTATA+AGG | + | chr7_4:261235-261254 | Msa1133950:CDS | 30.0% | |
!! | TCATTTTCAAGGAAAACTAC+AGG | - | chr7_4:261270-261289 | None:intergenic | 30.0% |
! | CTTACAGTAACTCATTTTCA+AGG | - | chr7_4:261281-261300 | None:intergenic | 30.0% |
TATTACAGCCTTCTCAAAAA+TGG | + | chr7_4:261612-261631 | Msa1133950:CDS | 30.0% | |
CTAGAATACAAAACGATCTT+AGG | - | chr7_4:261665-261684 | None:intergenic | 30.0% | |
! | CTAAGATCGTTTTGTATTCT+AGG | + | chr7_4:261663-261682 | Msa1133950:intron | 30.0% |
TTATTGCAAATGTGTTTGCT+TGG | - | chr7_4:261870-261889 | None:intergenic | 30.0% | |
!!! | GTAAAACCACTTTTTGTATG+AGG | - | chr7_4:262541-262560 | None:intergenic | 30.0% |
!!! | TTTTACTCATTGATTCTGTC+AGG | + | chr7_4:262555-262574 | Msa1133950:three_prime_UTR | 30.0% |
TTTATAATTCCCAGCATATC+TGG | + | chr7_4:262655-262674 | Msa1133950:three_prime_UTR | 30.0% | |
TTATAATTCCCAGCATATCT+GGG | + | chr7_4:262656-262675 | Msa1133950:three_prime_UTR | 30.0% | |
!! | TCATTTTCTTTCTAGCATAC+CGG | + | chr7_4:262802-262821 | Msa1133950:three_prime_UTR | 30.0% |
!! | TAATTTGTTTGCATTGCGTT+TGG | + | chr7_4:262930-262949 | Msa1133950:three_prime_UTR | 30.0% |
! | AATTTGTTTGCATTGCGTTT+GGG | + | chr7_4:262931-262950 | Msa1133950:three_prime_UTR | 30.0% |
AAAAGGATGCACTAAAGTAT+GGG | - | chr7_4:263004-263023 | None:intergenic | 30.0% | |
AAAAAGGATGCACTAAAGTA+TGG | - | chr7_4:263005-263024 | None:intergenic | 30.0% | |
! | TGATCTTAGAAAGTGTGAAA+AGG | + | chr7_4:263067-263086 | Msa1133950:three_prime_UTR | 30.0% |
GTAGAGGAATTCGAATACTT+AGG | - | chr7_4:254989-255008 | None:intergenic | 35.0% | |
TAAGTGGCAAAAATCGTAAC+CGG | - | chr7_4:255195-255214 | None:intergenic | 35.0% | |
CAACAAACAAACCTGTTTAG+CGG | - | chr7_4:255496-255515 | None:intergenic | 35.0% | |
!! | CATCAAGAAGACTTTAGGAT+CGG | - | chr7_4:255639-255658 | None:intergenic | 35.0% |
GATCCTAAAGTCTTCTTGAT+GGG | + | chr7_4:255638-255657 | Msa1133950:CDS | 35.0% | |
GCTGATAAGTTAGCATATAG+AGG | + | chr7_4:255750-255769 | Msa1133950:intron | 35.0% | |
!! | GAGTTAAGCTTTTTCCGTAA+AGG | + | chr7_4:255806-255825 | Msa1133950:intron | 35.0% |
TTTCAGTCGAATGTGCTTAT+AGG | + | chr7_4:256113-256132 | Msa1133950:intron | 35.0% | |
CACTAAAATTGCAATCTGAC+AGG | - | chr7_4:256307-256326 | None:intergenic | 35.0% | |
TTGAAGCGTAAATCTTGTCA+TGG | - | chr7_4:256512-256531 | None:intergenic | 35.0% | |
! | GTTTTACGAAAATAGGGACT+AGG | - | chr7_4:256578-256597 | None:intergenic | 35.0% |
AAGGTCAACTAAGTACTTCA+GGG | - | chr7_4:256747-256766 | None:intergenic | 35.0% | |
TAAGGTCAACTAAGTACTTC+AGG | - | chr7_4:256748-256767 | None:intergenic | 35.0% | |
TTGACCTTAAGATTCCTTTG+AGG | + | chr7_4:256759-256778 | Msa1133950:intron | 35.0% | |
GTATCCTCAAAGGAATCTTA+AGG | - | chr7_4:256766-256785 | None:intergenic | 35.0% | |
! | CATTCTCTTTTCTACGCTTT+TGG | - | chr7_4:256797-256816 | None:intergenic | 35.0% |
! | CAAAAGCGTAGAAAAGAGAA+TGG | + | chr7_4:256795-256814 | Msa1133950:intron | 35.0% |
GCCCGTCATATTATATATGT+CGG | - | chr7_4:256864-256883 | None:intergenic | 35.0% | |
!! | TATAATATGACGGGCAAAAC+TGG | + | chr7_4:256869-256888 | Msa1133950:intron | 35.0% |
GTTTATGCATGTATGTGTGT+GGG | - | chr7_4:257019-257038 | None:intergenic | 35.0% | |
AGTTTATGCATGTATGTGTG+TGG | - | chr7_4:257020-257039 | None:intergenic | 35.0% | |
CAATGGTCATATTAACGACT+AGG | - | chr7_4:257114-257133 | None:intergenic | 35.0% | |
!!! | TTTCAGTTTTAGAGTTGAGG+TGG | + | chr7_4:257168-257187 | Msa1133950:intron | 35.0% |
AGGATATTTCCACCTGAAAA+TGG | + | chr7_4:257288-257307 | Msa1133950:intron | 35.0% | |
!! | TACACTAAACCATTTTCAGG+TGG | - | chr7_4:257300-257319 | None:intergenic | 35.0% |
AGAATATCAAGGTGCATACA+AGG | + | chr7_4:257394-257413 | Msa1133950:CDS | 35.0% | |
! | TGTTCAAGTTATTTCCTTGC+TGG | + | chr7_4:257436-257455 | Msa1133950:intron | 35.0% |
CCCTTGGAAATCTAAATTGA+AGG | - | chr7_4:257513-257532 | None:intergenic | 35.0% | |
TTAGATTTCCAAGGGACTAT+TGG | + | chr7_4:257518-257537 | Msa1133950:intron | 35.0% | |
TTAATCCTGTCATTGCTTTG+AGG | + | chr7_4:257698-257717 | Msa1133950:intron | 35.0% | |
ATAAACCTCAAAGCAATGAC+AGG | - | chr7_4:257706-257725 | None:intergenic | 35.0% | |
TTATTAGATGGATGCACAGA+TGG | - | chr7_4:257770-257789 | None:intergenic | 35.0% | |
! | TGGTAATGTAATGTGATGGA+TGG | + | chr7_4:257809-257828 | Msa1133950:intron | 35.0% |
TGTTACTAGAGTTAAGAAGC+AGG | - | chr7_4:257933-257952 | None:intergenic | 35.0% | |
GGAAATAAACTAACCACTCA+TGG | - | chr7_4:258005-258024 | None:intergenic | 35.0% | |
AAAATCCCTTAGAGTGTGTT+TGG | + | chr7_4:258782-258801 | Msa1133950:intron | 35.0% | |
ATCATCCAAACACACTCTAA+GGG | - | chr7_4:258790-258809 | None:intergenic | 35.0% | |
GAGGGAATTCAAATACTTTG+AGG | - | chr7_4:258856-258875 | None:intergenic | 35.0% | |
GAGGAAATGTAATGTTACGA+GGG | - | chr7_4:258874-258893 | None:intergenic | 35.0% | |
TGAGGAAATGTAATGTTACG+AGG | - | chr7_4:258875-258894 | None:intergenic | 35.0% | |
TGAATTCCATTGTTTGGATG+GGG | - | chr7_4:258914-258933 | None:intergenic | 35.0% | |
GTGAATTCCATTGTTTGGAT+GGG | - | chr7_4:258915-258934 | None:intergenic | 35.0% | |
TTGAGGTGAATTCCATTGTT+TGG | - | chr7_4:258920-258939 | None:intergenic | 35.0% | |
GAGGGAATTCAAATACTTTG+AGG | - | chr7_4:258856-258875 | None:intergenic | 35.0% | |
GAGGGAATGTAATGTTATGA+GGG | - | chr7_4:258955-258974 | None:intergenic | 35.0% | |
TGAGGGAATGTAATGTTATG+AGG | - | chr7_4:258956-258975 | None:intergenic | 35.0% | |
! | TTCTAAGAGTGTGTTTGGAT+GGG | - | chr7_4:258988-259007 | None:intergenic | 35.0% |
! | ATTCTAAGAGTGTGTTTGGA+TGG | - | chr7_4:258989-259008 | None:intergenic | 35.0% |
! | TAGGATTCTAAGAGTGTGTT+TGG | - | chr7_4:258993-259012 | None:intergenic | 35.0% |
! | TCACTGGTTGTAACTTCTAA+GGG | - | chr7_4:259029-259048 | None:intergenic | 35.0% |
TGTTCATTAAATATGCAGGC+TGG | + | chr7_4:259152-259171 | Msa1133950:intron | 35.0% | |
GTTCATTAAATATGCAGGCT+GGG | + | chr7_4:259153-259172 | Msa1133950:intron | 35.0% | |
AATGTCATAAACTCCACAAC+AGG | - | chr7_4:259221-259240 | None:intergenic | 35.0% | |
ACCAAACACAGAGAAATCAT+GGG | - | chr7_4:259337-259356 | None:intergenic | 35.0% | |
AACCAAACACAGAGAAATCA+TGG | - | chr7_4:259338-259357 | None:intergenic | 35.0% | |
!!! | TCTGTGTTTGGTTTTCTGTT+TGG | + | chr7_4:259345-259364 | Msa1133950:intron | 35.0% |
GCTTCCTTCAGATTATTAGA+TGG | + | chr7_4:259417-259436 | Msa1133950:intron | 35.0% | |
GATGCCATCTAATAATCTGA+AGG | - | chr7_4:259424-259443 | None:intergenic | 35.0% | |
AGAATGATGTCTTTCACTCT+GGG | - | chr7_4:259686-259705 | None:intergenic | 35.0% | |
AAGAATGATGTCTTTCACTC+TGG | - | chr7_4:259687-259706 | None:intergenic | 35.0% | |
AAGGATTTGAAGATTCTGAG+GGG | - | chr7_4:259926-259945 | None:intergenic | 35.0% | |
CAAGGATTTGAAGATTCTGA+GGG | - | chr7_4:259927-259946 | None:intergenic | 35.0% | |
TCAAGGATTTGAAGATTCTG+AGG | - | chr7_4:259928-259947 | None:intergenic | 35.0% | |
!!! | CTGTTTTGACTCAGTTATCA+AGG | - | chr7_4:259945-259964 | None:intergenic | 35.0% |
ATTTCTGTATGCATGGTGAA+AGG | + | chr7_4:260190-260209 | Msa1133950:intron | 35.0% | |
AATCAATCACGGGATTACAT+GGG | - | chr7_4:260224-260243 | None:intergenic | 35.0% | |
! | CTGTAGTTTGTATCTTTAGG+AGG | - | chr7_4:260249-260268 | None:intergenic | 35.0% |
TCTTCCAATATAGAGCTCAA+CGG | - | chr7_4:260291-260310 | None:intergenic | 35.0% | |
ATCACCAATTATGTGGTGTT+TGG | + | chr7_4:260412-260431 | Msa1133950:intron | 35.0% | |
CTAACCAAACACCACATAAT+TGG | - | chr7_4:260419-260438 | None:intergenic | 35.0% | |
!!! | GTCAGTCAAGTTTTGTTTGT+TGG | + | chr7_4:260466-260485 | Msa1133950:intron | 35.0% |
CAGGAAGAATTGCAAACATA+AGG | - | chr7_4:260603-260622 | None:intergenic | 35.0% | |
TAGTAAGCCAAGAAGATGAA+GGG | - | chr7_4:260808-260827 | None:intergenic | 35.0% | |
TTGGGTCCTCTAAATACAAT+AGG | - | chr7_4:260956-260975 | None:intergenic | 35.0% | |
ATTGTATTTAGAGGACCCAA+TGG | + | chr7_4:260956-260975 | Msa1133950:CDS | 35.0% | |
CTGAAGTATATGTGCTCAAT+GGG | - | chr7_4:261098-261117 | None:intergenic | 35.0% | |
ACTGAAGTATATGTGCTCAA+TGG | - | chr7_4:261099-261118 | None:intergenic | 35.0% | |
TGCATAAAAGCAAAGTTGTG+GGG | - | chr7_4:261141-261160 | None:intergenic | 35.0% | |
CTGCATAAAAGCAAAGTTGT+GGG | - | chr7_4:261142-261161 | None:intergenic | 35.0% | |
ACTGCATAAAAGCAAAGTTG+TGG | - | chr7_4:261143-261162 | None:intergenic | 35.0% | |
TTATGCAGTGTTATGCATCT+TGG | + | chr7_4:261154-261173 | Msa1133950:intron | 35.0% | |
TGACTTATGTGCTGTAGATA+TGG | + | chr7_4:261390-261409 | Msa1133950:intron | 35.0% | |
GAAACTGGAATCAAGAACTT+CGG | - | chr7_4:261436-261455 | None:intergenic | 35.0% | |
CTTAACAGATTGAGAGAGAA+GGG | + | chr7_4:261578-261597 | Msa1133950:intron | 35.0% | |
!! | AAAGCCAACCATTTTTGAGA+AGG | - | chr7_4:261623-261642 | None:intergenic | 35.0% |
TTACCTAGTAGTATGTGAGA+TGG | + | chr7_4:261716-261735 | Msa1133950:intron | 35.0% | |
TATCCATCTCACATACTACT+AGG | - | chr7_4:261722-261741 | None:intergenic | 35.0% | |
GTAGTATGTGAGATGGATAT+AGG | + | chr7_4:261723-261742 | Msa1133950:intron | 35.0% | |
! | CCAAAGAGAAAGTGCATAAA+GGG | - | chr7_4:261985-262004 | None:intergenic | 35.0% |
! | ACCAAAGAGAAAGTGCATAA+AGG | - | chr7_4:261986-262005 | None:intergenic | 35.0% |
CATTATATCTCTTTGCTTGC+TGG | + | chr7_4:262333-262352 | Msa1133950:intron | 35.0% | |
! | TCATGTCTTGGTTAGTTCTT+TGG | + | chr7_4:262468-262487 | Msa1133950:three_prime_UTR | 35.0% |
TGATAACAATGACACAAGAG+AGG | + | chr7_4:262705-262724 | Msa1133950:three_prime_UTR | 35.0% | |
!! | ACAAGAGAGGAAGTTTTGTA+TGG | + | chr7_4:262718-262737 | Msa1133950:three_prime_UTR | 35.0% |
!! | AAGTTTTGTATGGAACCTAG+TGG | + | chr7_4:262728-262747 | Msa1133950:three_prime_UTR | 35.0% |
AAAAACAGAAGTTGACCACT+AGG | - | chr7_4:262746-262765 | None:intergenic | 35.0% | |
TAAGATCAAATCGACGTGAT+AGG | - | chr7_4:263055-263074 | None:intergenic | 35.0% | |
!! | TCAGAGTTGGTGAGTATCAA+TGG | - | chr7_4:255037-255056 | None:intergenic | 40.0% |
GGAACGAAAAGTTTCAGAGT+TGG | - | chr7_4:255050-255069 | None:intergenic | 40.0% | |
!! | TCTGAAACTTTTCGTTCCAC+AGG | + | chr7_4:255052-255071 | Msa1133950:five_prime_UTR | 40.0% |
ATGAATCGAGAAAGGAAGAG+TGG | - | chr7_4:255082-255101 | None:intergenic | 40.0% | |
!! | GGTTACGATTTTTGCCACTT+AGG | + | chr7_4:255194-255213 | Msa1133950:intron | 40.0% |
AGAAGAGAGATGTCTGAATG+CGG | - | chr7_4:255472-255491 | None:intergenic | 40.0% | |
CGATCCTAAAGTCTTCTTGA+TGG | + | chr7_4:255637-255656 | Msa1133950:CDS | 40.0% | |
TCACCCATCAAGAAGACTTT+AGG | - | chr7_4:255644-255663 | None:intergenic | 40.0% | |
TGAAGAGGTAAAGCGAGATA+TGG | + | chr7_4:255661-255680 | Msa1133950:intron | 40.0% | |
AAGCTACGAATATCCGCTAT+AGG | - | chr7_4:255785-255804 | None:intergenic | 40.0% | |
AACACTACAAAGGGTCTGTT+TGG | - | chr7_4:255874-255893 | None:intergenic | 40.0% | |
AACAGACCCTTTGTAGTGTT+TGG | + | chr7_4:255874-255893 | Msa1133950:intron | 40.0% | |
!! | AAGTCCAAGTCGGTTTTGTA+GGG | - | chr7_4:256376-256395 | None:intergenic | 40.0% |
!! | AAAACCGACTTGGACTTGTA+AGG | + | chr7_4:256379-256398 | Msa1133950:intron | 40.0% |
GGTCAGAAAATCTGTTTGAG+TGG | - | chr7_4:256425-256444 | None:intergenic | 40.0% | |
TATCAGACTTCTCAACAACC+AGG | + | chr7_4:256458-256477 | Msa1133950:intron | 40.0% | |
TAACACAAAAGTCAAAGGCC+TGG | - | chr7_4:256479-256498 | None:intergenic | 40.0% | |
AGTAGGTAGATAGTACGAAG+CGG | + | chr7_4:256662-256681 | Msa1133950:intron | 40.0% | |
CGTAGAAAAGAGAATGGAAG+AGG | + | chr7_4:256801-256820 | Msa1133950:intron | 40.0% | |
! | AAGAATACCTCTAAGAGACC+TGG | + | chr7_4:256829-256848 | Msa1133950:intron | 40.0% |
ATATGTCGGAATATAGGACC+AGG | - | chr7_4:256850-256869 | None:intergenic | 40.0% | |
! | TGATTTGTACATTCCGAAGC+CGG | + | chr7_4:257059-257078 | Msa1133950:intron | 40.0% |
CATATTAACGACTAGGCAAG+TGG | - | chr7_4:257107-257126 | None:intergenic | 40.0% | |
GTTCATTCATGCAATGCAAG+TGG | - | chr7_4:257214-257233 | None:intergenic | 40.0% | |
TTGTAAGGGGAAGATTGTGT+GGG | - | chr7_4:257243-257262 | None:intergenic | 40.0% | |
ATTGTAAGGGGAAGATTGTG+TGG | - | chr7_4:257244-257263 | None:intergenic | 40.0% | |
TTGCTTATGACATCTGCTTC+AGG | + | chr7_4:257268-257287 | Msa1133950:intron | 40.0% | |
TATCAAGGTGCATACAAGGT+TGG | + | chr7_4:257398-257417 | Msa1133950:intron | 40.0% | |
AAATAAAGCAACAGCCAGCA+AGG | - | chr7_4:257453-257472 | None:intergenic | 40.0% | |
ATACTTCTCCAATAGTCCCT+TGG | - | chr7_4:257529-257548 | None:intergenic | 40.0% | |
AAGGGACTATTGGAGAAGTA+TGG | + | chr7_4:257528-257547 | Msa1133950:CDS | 40.0% | |
GTTTAAACCTCGCAAATCAG+TGG | - | chr7_4:257634-257653 | None:intergenic | 40.0% | |
GGTTTATATACCAGTGCTTG+TGG | + | chr7_4:257719-257738 | Msa1133950:intron | 40.0% | |
ATATACCAGTGCTTGTGGAT+TGG | + | chr7_4:257724-257743 | Msa1133950:intron | 40.0% | |
!! | ATGTAATGTGATGGATGGCA+TGG | + | chr7_4:257814-257833 | Msa1133950:intron | 40.0% |
!! | TGTAATGTGATGGATGGCAT+GGG | + | chr7_4:257815-257834 | Msa1133950:intron | 40.0% |
!! | ACATTTTTCGGTACCATGAG+TGG | + | chr7_4:257989-258008 | Msa1133950:intron | 40.0% |
CATCATCCAAACACACTCTA+AGG | - | chr7_4:258791-258810 | None:intergenic | 40.0% | |
GGGAATGCAATGTAATGTTG+AGG | - | chr7_4:258893-258912 | None:intergenic | 40.0% | |
GAATTCCATTGTTTGGATGG+GGG | - | chr7_4:258913-258932 | None:intergenic | 40.0% | |
GGTGAATTCCATTGTTTGGA+TGG | - | chr7_4:258916-258935 | None:intergenic | 40.0% | |
! | TCTAAGAGTGTGTTTGGATG+GGG | - | chr7_4:258987-259006 | None:intergenic | 40.0% |
TAAGGGGGATGTATTGGATT+AGG | - | chr7_4:259012-259031 | None:intergenic | 40.0% | |
! | AACTTCTAAGGGGGATGTAT+TGG | - | chr7_4:259018-259037 | None:intergenic | 40.0% |
! | ACTGGTTGTAACTTCTAAGG+GGG | - | chr7_4:259027-259046 | None:intergenic | 40.0% |
! | CACTGGTTGTAACTTCTAAG+GGG | - | chr7_4:259028-259047 | None:intergenic | 40.0% |
! | CTCACTGGTTGTAACTTCTA+AGG | - | chr7_4:259030-259049 | None:intergenic | 40.0% |
TAGAAGTTACAACCAGTGAG+TGG | + | chr7_4:259030-259049 | Msa1133950:intron | 40.0% | |
TTCATACAAAGTCCACTCAC+TGG | - | chr7_4:259045-259064 | None:intergenic | 40.0% | |
! | GACATTTAACTTCTCCATGC+AGG | + | chr7_4:259235-259254 | Msa1133950:CDS | 40.0% |
GAGATAAACACTAACCTGCA+TGG | - | chr7_4:259252-259271 | None:intergenic | 40.0% | |
CCAAACACAGAGAAATCATG+GGG | - | chr7_4:259336-259355 | None:intergenic | 40.0% | |
! | ATAGTGATGTGGCTTGTGAA+CGG | + | chr7_4:259852-259871 | Msa1133950:intron | 40.0% |
AAAGCTCAAACCATAATCCG+TGG | + | chr7_4:260042-260061 | Msa1133950:intron | 40.0% | |
AAGCTCAAACCATAATCCGT+GGG | + | chr7_4:260043-260062 | Msa1133950:intron | 40.0% | |
CAATCAATCACGGGATTACA+TGG | - | chr7_4:260225-260244 | None:intergenic | 40.0% | |
TTTAGGAGGGCAATCAATCA+CGG | - | chr7_4:260235-260254 | None:intergenic | 40.0% | |
ACAAACTACAGATTTGTGGC+TGG | + | chr7_4:260258-260277 | Msa1133950:intron | 40.0% | |
AAACCCGTTGAGCTCTATAT+TGG | + | chr7_4:260284-260303 | Msa1133950:intron | 40.0% | |
CTTCCAATATAGAGCTCAAC+GGG | - | chr7_4:260290-260309 | None:intergenic | 40.0% | |
GAGCTCTATATTGGAAGATC+TGG | + | chr7_4:260293-260312 | Msa1133950:intron | 40.0% | |
!! | CAAAACTTGACTGACTCGTA+TGG | - | chr7_4:260461-260480 | None:intergenic | 40.0% |
CTAGTAAGCCAAGAAGATGA+AGG | - | chr7_4:260809-260828 | None:intergenic | 40.0% | |
CTTCATCTTCTTGGCTTACT+AGG | + | chr7_4:260807-260826 | Msa1133950:intron | 40.0% | |
GTCATCTTGATTTCTGTTGC+AGG | + | chr7_4:260865-260884 | Msa1133950:intron | 40.0% | |
CAGTGTTATGCATCTTGGTA+TGG | + | chr7_4:261159-261178 | Msa1133950:intron | 40.0% | |
CGAGCATCTTCAGATGAATA+TGG | - | chr7_4:261213-261232 | None:intergenic | 40.0% | |
TATTCATCTGAAGATGCTCG+TGG | + | chr7_4:261213-261232 | Msa1133950:CDS | 40.0% | |
CAAGGAAAACTACAGGATCA+GGG | - | chr7_4:261263-261282 | None:intergenic | 40.0% | |
TCAAGGAAAACTACAGGATC+AGG | - | chr7_4:261264-261283 | None:intergenic | 40.0% | |
!! | AGTACCTTTGCTTTTCCGAT+GGG | - | chr7_4:261465-261484 | None:intergenic | 40.0% |
!! | AAGTACCTTTGCTTTTCCGA+TGG | - | chr7_4:261466-261485 | None:intergenic | 40.0% |
GCTTAACAGATTGAGAGAGA+AGG | + | chr7_4:261577-261596 | Msa1133950:intron | 40.0% | |
ACAGCCTTCTCAAAAATGGT+TGG | + | chr7_4:261616-261635 | Msa1133950:CDS | 40.0% | |
!! | AATGGTTGGCTTTGCTCTAA+AGG | + | chr7_4:261630-261649 | Msa1133950:CDS | 40.0% |
TGCAAATGTGTTTGCTTGGT+AGG | - | chr7_4:261866-261885 | None:intergenic | 40.0% | |
CCCTTTATGCACTTTCTCTT+TGG | + | chr7_4:261982-262001 | Msa1133950:intron | 40.0% | |
!! | TTTCCTGACAGAAGCATTGA+TGG | - | chr7_4:262086-262105 | None:intergenic | 40.0% |
!! | TTTTGGCTATCTTGATGCAC+CGG | + | chr7_4:262189-262208 | Msa1133950:CDS | 40.0% |
!! | AGATTTGCTGCATAAGGCAT+GGG | - | chr7_4:262241-262260 | None:intergenic | 40.0% |
!! | CTTTCCAGATTTGCTGCATA+AGG | - | chr7_4:262247-262266 | None:intergenic | 40.0% |
TGCAGCAAATCTGGAAAGAT+TGG | + | chr7_4:262249-262268 | Msa1133950:CDS | 40.0% | |
! | TCTTTGCTTGCTGGTATATG+TGG | + | chr7_4:262342-262361 | Msa1133950:intron | 40.0% |
! | AGGTTGTGGTGGAAATTTGA+GGG | - | chr7_4:262521-262540 | None:intergenic | 40.0% |
! | CTTTTTGTATGAGGTTGTGG+TGG | - | chr7_4:262532-262551 | None:intergenic | 40.0% |
!!! | CCACTTTTTGTATGAGGTTG+TGG | - | chr7_4:262535-262554 | None:intergenic | 40.0% |
CCACAACCTCATACAAAAAG+TGG | + | chr7_4:262532-262551 | Msa1133950:three_prime_UTR | 40.0% | |
!! | TCATTGATTCTGTCAGGCTT+TGG | + | chr7_4:262561-262580 | Msa1133950:three_prime_UTR | 40.0% |
ACTCAAAACAGCAAGCAAGT+TGG | - | chr7_4:262840-262859 | None:intergenic | 40.0% | |
TTGAATTGTGGCTGTTATCC+CGG | + | chr7_4:262957-262976 | Msa1133950:three_prime_UTR | 40.0% | |
! | GAAAGTGTGAAAAGGCAGAT+TGG | + | chr7_4:263075-263094 | Msa1133950:three_prime_UTR | 40.0% |
AAGGAAGAGTGGAATACCTG+TGG | - | chr7_4:255071-255090 | None:intergenic | 45.0% | |
!! | GTGTTTTTGTGAGATCTCGC+CGG | + | chr7_4:255173-255192 | Msa1133950:intron | 45.0% |
TGTCTGAATGCGGAAAAGGA+AGG | - | chr7_4:255462-255481 | None:intergenic | 45.0% | |
GAGATGTCTGAATGCGGAAA+AGG | - | chr7_4:255466-255485 | None:intergenic | 45.0% | |
TCTCTCTTCTTCCGCTAAAC+AGG | + | chr7_4:255482-255501 | Msa1133950:CDS | 45.0% | |
!! | CAAGAAGACTTTAGGATCGG+CGG | - | chr7_4:255636-255655 | None:intergenic | 45.0% |
! | AGTCTTCTTGATGGGTGAAG+AGG | + | chr7_4:255646-255665 | Msa1133950:CDS | 45.0% |
AGATTTCGTAGGGCTCTGTT+TGG | + | chr7_4:255718-255737 | Msa1133950:intron | 45.0% | |
GAGGATGAGCTATCCTATAG+CGG | + | chr7_4:255769-255788 | Msa1133950:intron | 45.0% | |
CCTCTTTCCTAGGTTCTGTT+TGG | - | chr7_4:256170-256189 | None:intergenic | 45.0% | |
CCAAACAGAACCTAGGAAAG+AGG | + | chr7_4:256167-256186 | Msa1133950:intron | 45.0% | |
ACTGATCTTGCCTCTTTCCT+AGG | - | chr7_4:256180-256199 | None:intergenic | 45.0% | |
CCACTCTAGACAACCAATCA+AGG | - | chr7_4:256217-256236 | None:intergenic | 45.0% | |
! | CCTTGATTGGTTGTCTAGAG+TGG | + | chr7_4:256214-256233 | Msa1133950:intron | 45.0% |
GAAACCCTACAAAACCGACT+TGG | + | chr7_4:256369-256388 | Msa1133950:intron | 45.0% | |
!! | CAAGTCCAAGTCGGTTTTGT+AGG | - | chr7_4:256377-256396 | None:intergenic | 45.0% |
GTCACCTTACAAGTCCAAGT+CGG | - | chr7_4:256386-256405 | None:intergenic | 45.0% | |
TATAGGACCAGGTCTCTTAG+AGG | - | chr7_4:256839-256858 | None:intergenic | 45.0% | |
GATTTGTACATTCCGAAGCC+GGG | + | chr7_4:257060-257079 | Msa1133950:intron | 45.0% | |
ATTTGTACATTCCGAAGCCG+GGG | + | chr7_4:257061-257080 | Msa1133950:intron | 45.0% | |
AACTTGAACAGAAGAAGCCC+CGG | - | chr7_4:257081-257100 | None:intergenic | 45.0% | |
ATTCATGCAATGCAAGTGGC+TGG | - | chr7_4:257210-257229 | None:intergenic | 45.0% | |
TTGTACCAATCCACAAGCAC+TGG | - | chr7_4:257732-257751 | None:intergenic | 45.0% | |
!! | GTAATGTGATGGATGGCATG+GGG | + | chr7_4:257816-257835 | Msa1133950:intron | 45.0% |
AGTTAGCAGAAGTTCGCATG+AGG | - | chr7_4:257861-257880 | None:intergenic | 45.0% | |
! | TTCCATCTTAGGGGGTGTAT+TGG | + | chr7_4:258021-258040 | Msa1133950:intron | 45.0% |
ATCCAATACACCCCCTAAGA+TGG | - | chr7_4:258026-258045 | None:intergenic | 45.0% | |
ATAAAGAGAGGGGAGAAGAG+AGG | + | chr7_4:258319-258338 | Msa1133950:intron | 45.0% | |
GAGAGAGAGAGAGAAAAGAG+AGG | + | chr7_4:258376-258395 | Msa1133950:intron | 45.0% | |
GAAAAGAGAGGAGAGAGAGA+AGG | + | chr7_4:258434-258453 | Msa1133950:intron | 45.0% | |
AGGAGAGAGAGAAGGATGAA+GGG | + | chr7_4:258442-258461 | Msa1133950:intron | 45.0% | |
!! | TGGATGGGGGAATGTTTTGA+GGG | - | chr7_4:258973-258992 | None:intergenic | 45.0% |
! | TTGGATGGGGGAATGTTTTG+AGG | - | chr7_4:258974-258993 | None:intergenic | 45.0% |
! | CTAAGAGTGTGTTTGGATGG+GGG | - | chr7_4:258986-259005 | None:intergenic | 45.0% |
AATATGCAGGCTGGGTTTAC+TGG | + | chr7_4:259161-259180 | Msa1133950:intron | 45.0% | |
ATATGCAGGCTGGGTTTACT+GGG | + | chr7_4:259162-259181 | Msa1133950:intron | 45.0% | |
! | CTATGGTCTAAAGCCTGTTG+TGG | + | chr7_4:259205-259224 | Msa1133950:CDS | 45.0% |
CCCCATGATTTCTCTGTGTT+TGG | + | chr7_4:259333-259352 | Msa1133950:intron | 45.0% | |
AAACCACACCATACAGTTGG+AGG | + | chr7_4:259876-259895 | Msa1133950:intron | 45.0% | |
AACCACACCATACAGTTGGA+GGG | + | chr7_4:259877-259896 | Msa1133950:intron | 45.0% | |
AGCTCAAACCATAATCCGTG+GGG | + | chr7_4:260044-260063 | Msa1133950:intron | 45.0% | |
TGGAGGTGAATTAGAAGGGT+AGG | + | chr7_4:260067-260086 | Msa1133950:intron | 45.0% | |
GTGAATTAGAAGGGTAGGCA+TGG | + | chr7_4:260072-260091 | Msa1133950:intron | 45.0% | |
AAACCCCAACAGAAACCTGA+CGG | + | chr7_4:260098-260117 | Msa1133950:intron | 45.0% | |
ATCACGGGATTACATGGGTT+GGG | - | chr7_4:260219-260238 | None:intergenic | 45.0% | |
AATCACGGGATTACATGGGT+TGG | - | chr7_4:260220-260239 | None:intergenic | 45.0% | |
TTAGGAGGGCAATCAATCAC+GGG | - | chr7_4:260234-260253 | None:intergenic | 45.0% | |
AACTACAGATTTGTGGCTGG+AGG | + | chr7_4:260261-260280 | Msa1133950:intron | 45.0% | |
AAGCACTCCCTTCATCTTCT+TGG | + | chr7_4:260798-260817 | Msa1133950:intron | 45.0% | |
!! | ATGCCCTGGGTTGAAAGTTT+TGG | + | chr7_4:261185-261204 | Msa1133950:CDS | 45.0% |
GTGCCAAAACTTTCAACCCA+GGG | - | chr7_4:261191-261210 | None:intergenic | 45.0% | |
CAAGAACTTCGGCAGAAACA+GGG | - | chr7_4:261425-261444 | None:intergenic | 45.0% | |
TCAAGAACTTCGGCAGAAAC+AGG | - | chr7_4:261426-261445 | None:intergenic | 45.0% | |
ATGTGTTTGCTTGGTAGGAC+AGG | - | chr7_4:261861-261880 | None:intergenic | 45.0% | |
AAAGGAAGGAATCAGTGCTG+AGG | + | chr7_4:261927-261946 | Msa1133950:CDS | 45.0% | |
TGTCAGGAAAACCAACAGAC+TGG | + | chr7_4:262096-262115 | Msa1133950:CDS | 45.0% | |
TTCAACTGTCACCAGTCTGT+TGG | - | chr7_4:262110-262129 | None:intergenic | 45.0% | |
AGACTGGTGACAGTTGAAGA+AGG | + | chr7_4:262112-262131 | Msa1133950:CDS | 45.0% | |
GACTGGTGACAGTTGAAGAA+GGG | + | chr7_4:262113-262132 | Msa1133950:CDS | 45.0% | |
AATCTGTGCATCTGTCATCG+AGG | + | chr7_4:262162-262181 | Msa1133950:CDS | 45.0% | |
! | TCTGTCATCGAGGAGAGTTT+TGG | + | chr7_4:262172-262191 | Msa1133950:CDS | 45.0% |
!! | CAGATTTGCTGCATAAGGCA+TGG | - | chr7_4:262242-262261 | None:intergenic | 45.0% |
CATGCCTTATGCAGCAAATC+TGG | + | chr7_4:262240-262259 | Msa1133950:CDS | 45.0% | |
ATTTAGGCAGTTGCAGCCAT+AGG | - | chr7_4:262424-262443 | None:intergenic | 45.0% | |
! | GAGGTTGTGGTGGAAATTTG+AGG | - | chr7_4:262522-262541 | None:intergenic | 45.0% |
TAATTCCCAGCATATCTGGG+AGG | + | chr7_4:262659-262678 | Msa1133950:three_prime_UTR | 45.0% | |
AACATCCTCCCAGATATGCT+GGG | - | chr7_4:262667-262686 | None:intergenic | 45.0% | |
TAGCATACCGGAAACTGCAA+AGG | + | chr7_4:262814-262833 | Msa1133950:three_prime_UTR | 45.0% | |
!! | AAGTTGGCCTTTGCAGTTTC+CGG | - | chr7_4:262824-262843 | None:intergenic | 45.0% |
! | GCGTTTGGGACTTTGAATTG+TGG | + | chr7_4:262945-262964 | Msa1133950:three_prime_UTR | 45.0% |
TCTCAGAAGCAGGCTTATAC+CGG | - | chr7_4:262979-262998 | None:intergenic | 45.0% | |
AGTATGGGTATCTCAGAAGC+AGG | - | chr7_4:262989-263008 | None:intergenic | 45.0% | |
GGTCTTGCCAAACAGAACCT+AGG | + | chr7_4:256160-256179 | Msa1133950:intron | 50.0% | |
AGTGTAACGCCTCAGCATTG+AGG | - | chr7_4:256689-256708 | None:intergenic | 50.0% | |
! | TGGAGAAGTATGGTCCTGAG+AGG | + | chr7_4:257538-257557 | Msa1133950:CDS | 50.0% |
! | GGAGAAGTATGGTCCTGAGA+GGG | + | chr7_4:257539-257558 | Msa1133950:CDS | 50.0% |
!! | TTTGCAGCCACTGATTTGCG+AGG | + | chr7_4:257624-257643 | Msa1133950:intron | 50.0% |
CATGAAAGGAAGGACAGCGA+GGG | - | chr7_4:257660-257679 | None:intergenic | 50.0% | |
ACATGAAAGGAAGGACAGCG+AGG | - | chr7_4:257661-257680 | None:intergenic | 50.0% | |
TAGATGGATGCACAGATGGC+AGG | - | chr7_4:257766-257785 | None:intergenic | 50.0% | |
! | ATGGCATGGGGTGTCATGTT+GGG | + | chr7_4:257828-257847 | Msa1133950:intron | 50.0% |
AGGAGAGAGACGAAGAGAGA+AGG | + | chr7_4:258396-258415 | Msa1133950:intron | 50.0% | |
GGAGAGAGACGAAGAGAGAA+GGG | + | chr7_4:258397-258416 | Msa1133950:intron | 50.0% | |
AGAGAGGAGGGAGAAAAGAG+AGG | + | chr7_4:258422-258441 | Msa1133950:intron | 50.0% | |
GAGGAGAGAGAGAAGGATGA+AGG | + | chr7_4:258441-258460 | Msa1133950:intron | 50.0% | |
GCATTCCCCCATCCAAACAA+TGG | + | chr7_4:258905-258924 | Msa1133950:intron | 50.0% | |
GGGTTTACTGGGATTGGAGT+TGG | + | chr7_4:259173-259192 | Msa1133950:CDS | 50.0% | |
!! | GGAGTTGGTGCTGCTTACTA+TGG | + | chr7_4:259188-259207 | Msa1133950:CDS | 50.0% |
GGAATCTGCAAGCAATGCTC+TGG | + | chr7_4:259366-259385 | Msa1133950:intron | 50.0% | |
GGCAAACCACACCATACAGT+TGG | + | chr7_4:259873-259892 | Msa1133950:intron | 50.0% | |
ACCACACCATACAGTTGGAG+GGG | + | chr7_4:259878-259897 | Msa1133950:intron | 50.0% | |
TCAAACCATAATCCGTGGGG+TGG | + | chr7_4:260047-260066 | Msa1133950:intron | 50.0% | |
TCTAATTCACCTCCACCCCA+CGG | - | chr7_4:260062-260081 | None:intergenic | 50.0% | |
TGGGGTGGAGGTGAATTAGA+AGG | + | chr7_4:260062-260081 | Msa1133950:intron | 50.0% | |
GGGGTGGAGGTGAATTAGAA+GGG | + | chr7_4:260063-260082 | Msa1133950:intron | 50.0% | |
AACCCCAACAGAAACCTGAC+GGG | + | chr7_4:260099-260118 | Msa1133950:intron | 50.0% | |
ACTGATATTGTGTCCCCGTC+AGG | - | chr7_4:260116-260135 | None:intergenic | 50.0% | |
GGTGCCAAAACTTTCAACCC+AGG | - | chr7_4:261192-261211 | None:intergenic | 50.0% | |
TCCAGTTTCTGCCTTCCCAT+CGG | + | chr7_4:261447-261466 | Msa1133950:CDS | 50.0% | |
!! | CCTTTGCTTTTCCGATGGGA+AGG | - | chr7_4:261461-261480 | None:intergenic | 50.0% |
CCTTCCCATCGGAAAAGCAA+AGG | + | chr7_4:261458-261477 | Msa1133950:CDS | 50.0% | |
TTGCTTGGTAGGACAGGAAG+AGG | - | chr7_4:261855-261874 | None:intergenic | 50.0% | |
GCTGAGACACTAGCAAAGGA+AGG | + | chr7_4:261913-261932 | Msa1133950:CDS | 50.0% | |
! | GAAGGAATCAGTGCTGAGGT+AGG | + | chr7_4:261931-261950 | Msa1133950:intron | 50.0% |
!! | TTGATGGTGGCTCGATCAAG+CGG | - | chr7_4:262070-262089 | None:intergenic | 50.0% |
!! | CCTGACAGAAGCATTGATGG+TGG | - | chr7_4:262083-262102 | None:intergenic | 50.0% |
CCACCATCAATGCTTCTGTC+AGG | + | chr7_4:262080-262099 | Msa1133950:CDS | 50.0% | |
GAAGAAGGGTTTCCTCAGCA+TGG | + | chr7_4:262127-262146 | Msa1133950:CDS | 50.0% | |
ATGCCACAGATCTGTGCCTA+TGG | + | chr7_4:262405-262424 | Msa1133950:CDS | 50.0% | |
GAACATCCTCCCAGATATGC+TGG | - | chr7_4:262668-262687 | None:intergenic | 50.0% | |
CTCAGAAGCAGGCTTATACC+GGG | - | chr7_4:262978-262997 | None:intergenic | 50.0% | |
! | GAGAGAGAGAGAGAGCGTAG+AGG | - | chr7_4:255005-255024 | None:intergenic | 55.0% |
AACAGAAGAAGCCCCGGCTT+CGG | - | chr7_4:257075-257094 | None:intergenic | 55.0% | |
! | TGCAATGCAAGTGGCTGGCT+AGG | - | chr7_4:257205-257224 | None:intergenic | 55.0% |
TCTCGACACTCCCATCACTG+AGG | + | chr7_4:257563-257582 | Msa1133950:CDS | 55.0% | |
AAAGGAAGGACAGCGAGGGA+TGG | - | chr7_4:257656-257675 | None:intergenic | 55.0% | |
! | GATGGCATGGGGTGTCATGT+TGG | + | chr7_4:257827-257846 | Msa1133950:intron | 55.0% |
AAGAGAGGGGAGAAGAGAGG+AGG | + | chr7_4:258322-258341 | Msa1133950:intron | 55.0% | |
AGAGAGGGGAGAAGAGAGGA+GGG | + | chr7_4:258323-258342 | Msa1133950:intron | 55.0% | |
CGAAGAGAGAAGGGAGAGAG+AGG | + | chr7_4:258406-258425 | Msa1133950:intron | 55.0% | |
AGAGAGAAGGGAGAGAGAGG+AGG | + | chr7_4:258409-258428 | Msa1133950:intron | 55.0% | |
GAGAGAAGGGAGAGAGAGGA+GGG | + | chr7_4:258410-258429 | Msa1133950:intron | 55.0% | |
CAGGCTGGGTTTACTGGGAT+TGG | + | chr7_4:259167-259186 | Msa1133950:intron | 55.0% | |
CCACACCATACAGTTGGAGG+GGG | + | chr7_4:259879-259898 | Msa1133950:intron | 55.0% | |
AACCATAATCCGTGGGGTGG+AGG | + | chr7_4:260050-260069 | Msa1133950:intron | 55.0% | |
ACCCCAACAGAAACCTGACG+GGG | + | chr7_4:260100-260119 | Msa1133950:intron | 55.0% | |
TCCCCGTCAGGTTTCTGTTG+GGG | - | chr7_4:260104-260123 | None:intergenic | 55.0% | |
GTCCCCGTCAGGTTTCTGTT+GGG | - | chr7_4:260105-260124 | None:intergenic | 55.0% | |
TGTCCCCGTCAGGTTTCTGT+TGG | - | chr7_4:260106-260125 | None:intergenic | 55.0% | |
ACACCAGCAGCAGCACCATT+GGG | - | chr7_4:260974-260993 | None:intergenic | 55.0% | |
AACACCAGCAGCAGCACCAT+TGG | - | chr7_4:260975-260994 | None:intergenic | 55.0% | |
!! | AATGGTGCTGCTGCTGGTGT+TGG | + | chr7_4:260974-260993 | Msa1133950:CDS | 55.0% |
TCTTGGTATGGCTCATGCCC+TGG | + | chr7_4:261171-261190 | Msa1133950:CDS | 55.0% | |
CTTGGTATGGCTCATGCCCT+GGG | + | chr7_4:261172-261191 | Msa1133950:CDS | 55.0% | |
TCCGATGGGAAGGCAGAAAC+TGG | - | chr7_4:261451-261470 | None:intergenic | 55.0% | |
GGCTGCTGAGACACTAGCAA+AGG | + | chr7_4:261909-261928 | Msa1133950:intron | 55.0% | |
GGGTTTCCTCAGCATGGTGT+TGG | + | chr7_4:262133-262152 | Msa1133950:CDS | 55.0% | |
TGGCTATCTTGATGCACCGG+TGG | + | chr7_4:262192-262211 | Msa1133950:CDS | 55.0% | |
! | GGAAAGATTGGCTGTCCCAC+AGG | + | chr7_4:262261-262280 | Msa1133950:CDS | 55.0% |
CAGCCATAGGCACAGATCTG+TGG | - | chr7_4:262411-262430 | None:intergenic | 55.0% | |
CGAAGCGGTCCTCAATGCTG+AGG | + | chr7_4:256677-256696 | Msa1133950:intron | 60.0% | |
!! | GGAGTGTCGAGAACCCTCTC+AGG | - | chr7_4:257555-257574 | None:intergenic | 60.0% |
AGAGGAGGGAGAGGAGAGAG+AGG | + | chr7_4:258337-258356 | Msa1133950:intron | 60.0% | |
GAGGAGGGAGAGGAGAGAGA+GGG | + | chr7_4:258338-258357 | Msa1133950:intron | 60.0% | |
GAGAGAGAGGGAGAGGAGAG+AGG | + | chr7_4:258350-258369 | Msa1133950:intron | 60.0% | |
CCCCCTCCAACTGTATGGTG+TGG | - | chr7_4:259882-259901 | None:intergenic | 60.0% | |
CTGTGCCCCCTCCAACTGTA+TGG | - | chr7_4:259887-259906 | None:intergenic | 60.0% | |
! | CATACAGTTGGAGGGGGCAC+AGG | + | chr7_4:259885-259904 | Msa1133950:intron | 60.0% |
! | CACCTCCACCCCACGGATTA+TGG | - | chr7_4:260055-260074 | None:intergenic | 60.0% |
TGGTGGCTCGATCAAGCGGT+CGG | - | chr7_4:262066-262085 | None:intergenic | 60.0% | |
TCAGCGCCAACACCATGCTG+AGG | - | chr7_4:262142-262161 | None:intergenic | 60.0% | |
! | GCACCGGTGGAGAGAATTGC+CGG | + | chr7_4:262205-262224 | Msa1133950:CDS | 60.0% |
CACCGGTGGAGAGAATTGCC+GGG | + | chr7_4:262206-262225 | Msa1133950:CDS | 60.0% | |
ACCGGTGGAGAGAATTGCCG+GGG | + | chr7_4:262207-262226 | Msa1133950:CDS | 60.0% | |
AGGCATGGGAACATCAGCCC+CGG | - | chr7_4:262227-262246 | None:intergenic | 60.0% | |
GGGGAGAAGAGAGGAGGGAG+AGG | + | chr7_4:258328-258347 | Msa1133950:intron | 65.0% | |
GGGAGAGGAGAGAGAGGGAG+AGG | + | chr7_4:258343-258362 | Msa1133950:intron | 65.0% | |
!! | GGACCCAATGGTGCTGCTGC+TGG | + | chr7_4:260968-260987 | Msa1133950:CDS | 65.0% |
GCCCCGGCAATTCTCTCCAC+CGG | - | chr7_4:262211-262230 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 254835 | 263104 | 254835 | ID=Msa1133950;Name=Msa1133950 |
chr7_4 | mRNA | 254835 | 263104 | 254835 | ID=Msa1133950-mRNA-1;Parent=Msa1133950;Name=Msa1133950-mRNA-1;_AED=0.08;_eAED=0.08;_QI=259|1|1|1|1|1|14|663|361 |
chr7_4 | exon | 254835 | 255073 | 254835 | ID=Msa1133950-mRNA-1:exon:66;Parent=Msa1133950-mRNA-1 |
chr7_4 | exon | 255313 | 255356 | 255313 | ID=Msa1133950-mRNA-1:exon:67;Parent=Msa1133950-mRNA-1 |
chr7_4 | exon | 255447 | 255503 | 255447 | ID=Msa1133950-mRNA-1:exon:68;Parent=Msa1133950-mRNA-1 |
chr7_4 | exon | 255587 | 255667 | 255587 | ID=Msa1133950-mRNA-1:exon:69;Parent=Msa1133950-mRNA-1 |
chr7_4 | exon | 257389 | 257415 | 257389 | ID=Msa1133950-mRNA-1:exon:70;Parent=Msa1133950-mRNA-1 |
chr7_4 | exon | 257522 | 257584 | 257522 | ID=Msa1133950-mRNA-1:exon:71;Parent=Msa1133950-mRNA-1 |
chr7_4 | exon | 259170 | 259256 | 259170 | ID=Msa1133950-mRNA-1:exon:72;Parent=Msa1133950-mRNA-1 |
chr7_4 | exon | 260887 | 261012 | 260887 | ID=Msa1133950-mRNA-1:exon:73;Parent=Msa1133950-mRNA-1 |
chr7_4 | exon | 261162 | 261295 | 261162 | ID=Msa1133950-mRNA-1:exon:74;Parent=Msa1133950-mRNA-1 |
chr7_4 | exon | 261407 | 261479 | 261407 | ID=Msa1133950-mRNA-1:exon:75;Parent=Msa1133950-mRNA-1 |
chr7_4 | exon | 261586 | 261651 | 261586 | ID=Msa1133950-mRNA-1:exon:76;Parent=Msa1133950-mRNA-1 |
chr7_4 | exon | 261910 | 261948 | 261910 | ID=Msa1133950-mRNA-1:exon:77;Parent=Msa1133950-mRNA-1 |
chr7_4 | exon | 262043 | 262282 | 262043 | ID=Msa1133950-mRNA-1:exon:78;Parent=Msa1133950-mRNA-1 |
chr7_4 | exon | 262373 | 263104 | 262373 | ID=Msa1133950-mRNA-1:exon:79;Parent=Msa1133950-mRNA-1 |
chr7_4 | five_prime_UTR | 254835 | 255073 | 254835 | ID=Msa1133950-mRNA-1:five_prime_utr;Parent=Msa1133950-mRNA-1 |
chr7_4 | five_prime_UTR | 255313 | 255332 | 255313 | ID=Msa1133950-mRNA-1:five_prime_utr;Parent=Msa1133950-mRNA-1 |
chr7_4 | CDS | 255333 | 255356 | 255333 | ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1 |
chr7_4 | CDS | 255447 | 255503 | 255447 | ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1 |
chr7_4 | CDS | 255587 | 255667 | 255587 | ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1 |
chr7_4 | CDS | 257389 | 257415 | 257389 | ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1 |
chr7_4 | CDS | 257522 | 257584 | 257522 | ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1 |
chr7_4 | CDS | 259170 | 259256 | 259170 | ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1 |
chr7_4 | CDS | 260887 | 261012 | 260887 | ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1 |
chr7_4 | CDS | 261162 | 261295 | 261162 | ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1 |
chr7_4 | CDS | 261407 | 261479 | 261407 | ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1 |
chr7_4 | CDS | 261586 | 261651 | 261586 | ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1 |
chr7_4 | CDS | 261910 | 261948 | 261910 | ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1 |
chr7_4 | CDS | 262043 | 262282 | 262043 | ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1 |
chr7_4 | CDS | 262373 | 262441 | 262373 | ID=Msa1133950-mRNA-1:cds;Parent=Msa1133950-mRNA-1 |
chr7_4 | three_prime_UTR | 262442 | 263104 | 262442 | ID=Msa1133950-mRNA-1:three_prime_utr;Parent=Msa1133950-mRNA-1 |
Gene Sequence |
Protein sequence |