Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1104120 | XP_013448517.1 | 98.496 | 532 | 8 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1091 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1104120 | sp|Q42290|MPPB_ARATH | 75.985 | 533 | 125 | 2 | 1 | 532 | 1 | 531 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1104120 | A0A072TYG3 | 98.496 | 532 | 8 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1091 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0169070 | Msa1104120 | 0.800418 | 1.455038e-48 | -8.615850e-47 |
| Msa1019190 | Msa1104120 | 0.975723 | 1.770674e-140 | -8.615850e-47 |
| Msa1046140 | Msa1104120 | 0.818930 | 1.515437e-52 | -8.615850e-47 |
| Msa1091030 | Msa1104120 | 0.807367 | 5.232101e-50 | -8.615850e-47 |
| Msa1104120 | Msa1133950 | 0.803609 | 3.212542e-49 | -8.615850e-47 |
| Msa1104120 | Msa1134020 | 0.847507 | 1.106676e-59 | -8.615850e-47 |
| Msa1104120 | Msa1147690 | 0.919722 | 3.153775e-87 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1104120 | MtrunA17_Chr7g0234701 | 98.496 | 532 | 8 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1091 |
| Msa1104120 | MtrunA17_Chr8g0340831 | 31.944 | 432 | 275 | 11 | 97 | 520 | 77 | 497 | 1.66e-59 | 205 |
| Msa1104120 | MtrunA17_Chr8g0389651 | 31.556 | 450 | 279 | 16 | 82 | 520 | 69 | 500 | 1.07e-55 | 194 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1104120 | AT3G02090.1 | 75.985 | 533 | 125 | 2 | 1 | 532 | 1 | 531 | 0.0 | 856 |
| Msa1104120 | AT3G02090.2 | 75.644 | 505 | 120 | 2 | 1 | 504 | 1 | 503 | 0.0 | 803 |
| Msa1104120 | AT3G16480.1 | 30.377 | 451 | 290 | 11 | 84 | 526 | 63 | 497 | 1.21e-51 | 184 |
| Msa1104120 | AT1G51980.1 | 30.536 | 429 | 281 | 12 | 99 | 521 | 79 | 496 | 6.44e-51 | 182 |
| Msa1104120 | AT1G51980.2 | 32.021 | 381 | 243 | 11 | 99 | 473 | 79 | 449 | 2.79e-46 | 168 |
Find 188 sgRNAs with CRISPR-Local
Find 400 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTAATTCATACAAGAATT+TGG | 0.107184 | 7_3:+40783173 | None:intergenic |
| TCCCCTTGGCAGAACCATTT+TGG | 0.120950 | 7_3:-40786965 | Msa1104120:CDS |
| TGTGCTCAATTTAAACTTAA+TGG | 0.136934 | 7_3:-40783358 | Msa1104120:three_prime_UTR |
| GGAAGAGGAGATTGAGAATA+TGG | 0.156727 | 7_3:-40788311 | Msa1104120:CDS |
| TTTGGAGCATATGATATTTA+AGG | 0.160878 | 7_3:-40788362 | Msa1104120:CDS |
| GCCTGTTGCGTTGGATATTT+TGG | 0.171866 | 7_3:-40788218 | Msa1104120:CDS |
| GTGTGGCTAGGGTTTGGTTT+GGG | 0.202173 | 7_3:+40788832 | None:intergenic |
| AGAGTTGTGATGCGAGTTTC+AGG | 0.218151 | 7_3:+40788505 | None:intergenic |
| CGTGTGTGGTCACGGATTTC+GGG | 0.227157 | 7_3:+40788541 | None:intergenic |
| TCCTGATTCAATTGCTTTGA+TGG | 0.229373 | 7_3:-40786392 | Msa1104120:CDS |
| GACAACCAAGTTGGCTTATC+AGG | 0.231981 | 7_3:-40785177 | Msa1104120:CDS |
| GAGAAAGGGATGTTATTCTT+AGG | 0.233093 | 7_3:-40788150 | Msa1104120:CDS |
| TCGTGTGTGGTCACGGATTT+CGG | 0.234643 | 7_3:+40788540 | None:intergenic |
| CCTCATTGATTTAGTGCATT+TGG | 0.251085 | 7_3:-40783080 | Msa1104120:three_prime_UTR |
| ATTAATTCATACAAGAATTT+GGG | 0.258457 | 7_3:+40783174 | None:intergenic |
| CAGAAGCCAGGGTGGGGTTC+GGG | 0.279001 | 7_3:+40783121 | None:intergenic |
| CCGAACCCCACCCTGGCTTC+TGG | 0.289464 | 7_3:-40783120 | Msa1104120:three_prime_UTR |
| AAGACCCGTGTCCTTGTAAT+TGG | 0.292153 | 7_3:+40786155 | None:intergenic |
| TCGCTTCTGCTTCACATTGA+TGG | 0.297186 | 7_3:-40783962 | Msa1104120:CDS |
| GAGGAGGAATGCGAGGGATT+TGG | 0.298473 | 7_3:-40788332 | Msa1104120:CDS |
| GTTCGGAGGTGGTGGGGAAG+GGG | 0.298980 | 7_3:+40788660 | None:intergenic |
| TGCAAGCAATGCTGGGTTCT+TGG | 0.313082 | 7_3:-40786366 | Msa1104120:CDS |
| CCAGAAGCCAGGGTGGGGTT+CGG | 0.319072 | 7_3:+40783120 | None:intergenic |
| AGGCCATCCAGAGGCATATA+TGG | 0.333653 | 7_3:+40783304 | None:intergenic |
| CAAAGATCACTTCCTCTGTT+TGG | 0.333829 | 7_3:+40787019 | None:intergenic |
| TGGTCACGGATTTCGGGTTT+AGG | 0.334517 | 7_3:+40788547 | None:intergenic |
| GGACTGCTACCGTTGGGGTT+TGG | 0.368224 | 7_3:-40788438 | Msa1104120:CDS |
| TTTAAACTTAATGGAATGTC+TGG | 0.369437 | 7_3:-40783349 | Msa1104120:three_prime_UTR |
| GGATGTTATTCTTAGGGAAA+TGG | 0.373559 | 7_3:-40788143 | Msa1104120:CDS |
| GATCCACGTTTCCTCAAATT+CGG | 0.382243 | 7_3:-40788574 | Msa1104120:CDS |
| TTGGAGCATATGATATTTAA+GGG | 0.382979 | 7_3:-40788361 | Msa1104120:CDS |
| GCTCAAGGACTGCTACCGTT+GGG | 0.383692 | 7_3:-40788444 | Msa1104120:CDS |
| TTACCTTGTCATAAATAAAT+CGG | 0.386383 | 7_3:+40783564 | None:intergenic |
| AGGGCTGCCCGTGTGTGGCT+AGG | 0.390791 | 7_3:+40788820 | None:intergenic |
| TTCGGAGGTGGTGGGGAAGG+GGG | 0.391411 | 7_3:+40788661 | None:intergenic |
| TGCAACACGTTTAATTGTAC+TGG | 0.394685 | 7_3:+40783589 | None:intergenic |
| ACGTTCGGAGGTGGTGGGGA+AGG | 0.396814 | 7_3:+40788658 | None:intergenic |
| CTAGCAAACAATTCAGCAAA+TGG | 0.400249 | 7_3:+40783629 | None:intergenic |
| CGTCTGAACCAGTTGTAATC+AGG | 0.402332 | 7_3:+40783419 | None:intergenic |
| GATGGTCATGCAAGCAATGC+TGG | 0.404594 | 7_3:-40786374 | Msa1104120:CDS |
| GTGGCGACACGGAGTCCGTT+AGG | 0.407403 | 7_3:+40788481 | None:intergenic |
| ATTCAAAGTTTGATGAGAAT+CGG | 0.408002 | 7_3:-40788180 | Msa1104120:CDS |
| TGTGTGGCTAGGGTTTGGTT+TGG | 0.409673 | 7_3:+40788831 | None:intergenic |
| GCCCGTGTGTGGCTAGGGTT+TGG | 0.412591 | 7_3:+40788826 | None:intergenic |
| CGTTCGGAGGTGGTGGGGAA+GGG | 0.413130 | 7_3:+40788659 | None:intergenic |
| ACCATCAAAGCAATTGAATC+AGG | 0.413135 | 7_3:+40786391 | None:intergenic |
| TTGTTTCAGCTACTCACATA+TGG | 0.414073 | 7_3:-40783662 | Msa1104120:intron |
| AATTTGAGGAAACGTGGATC+TGG | 0.422726 | 7_3:+40788577 | None:intergenic |
| AGCGTTTACCTGATTACAAC+TGG | 0.423477 | 7_3:-40783427 | Msa1104120:CDS |
| AGCAACTCAGTTGGTTGAAA+AGG | 0.424795 | 7_3:-40786605 | Msa1104120:CDS |
| ATCATGACGTTCGGAGGTGG+TGG | 0.429511 | 7_3:+40788652 | None:intergenic |
| TAATCAGGTAAACGCTGAAT+AGG | 0.429534 | 7_3:+40783434 | None:intergenic |
| TTCAAGGTGATAGCTGCATC+TGG | 0.431989 | 7_3:-40786700 | Msa1104120:intron |
| CTCAAAAGAGACCAGAAGCC+AGG | 0.433705 | 7_3:+40783109 | None:intergenic |
| GTTCTGAGCAGGTCCCAAAA+TGG | 0.434416 | 7_3:+40786951 | None:intergenic |
| GCCAAAATATCCAACGCAAC+AGG | 0.437846 | 7_3:+40788217 | None:intergenic |
| GTGCTCTCAGCCGGACTGCT+TGG | 0.443674 | 7_3:-40785228 | Msa1104120:intron |
| AGCTGAAGATATTGGTCGTC+AGG | 0.444449 | 7_3:-40783927 | Msa1104120:intron |
| AGAAAGGGATGTTATTCTTA+GGG | 0.445881 | 7_3:-40788149 | Msa1104120:CDS |
| TGCCTCTGGATGGCCTGTTT+AGG | 0.447715 | 7_3:-40783297 | Msa1104120:three_prime_UTR |
| CGACCAATATCTTCAGCTAC+AGG | 0.448715 | 7_3:+40783932 | None:intergenic |
| TGGGTGTCCGCCGGGATGAA+CGG | 0.451419 | 7_3:+40788758 | None:intergenic |
| TGCATTGCCCTAAAATTGCT+TGG | 0.456703 | 7_3:-40783149 | Msa1104120:three_prime_UTR |
| GGGCTGCCCGTGTGTGGCTA+GGG | 0.459684 | 7_3:+40788821 | None:intergenic |
| CTCCGTCTCAAATCTCGAAC+CGG | 0.463201 | 7_3:+40788408 | None:intergenic |
| GGTTCAGACGCAGAACCTAC+TGG | 0.465267 | 7_3:-40783406 | Msa1104120:CDS |
| TATTCCTCTTGCACAATTTG+CGG | 0.470822 | 7_3:-40786443 | Msa1104120:CDS |
| TAGCAAACAATTCAGCAAAT+GGG | 0.475811 | 7_3:+40783630 | None:intergenic |
| TTCTGCCAAGGGGAGTGTAC+TGG | 0.482436 | 7_3:+40786974 | None:intergenic |
| GAAGAGGAGATTGAGAATAT+GGG | 0.483391 | 7_3:-40788310 | Msa1104120:CDS |
| GCTGTTGTCAGTGATGTAAA+TGG | 0.483428 | 7_3:-40783212 | Msa1104120:three_prime_UTR |
| TGTTACGCGTGCTCGCAATC+AGG | 0.484599 | 7_3:-40785141 | Msa1104120:intron |
| ATGTACTCCATATATGCCTC+TGG | 0.485742 | 7_3:-40783311 | Msa1104120:three_prime_UTR |
| TGTGGCTAGGGTTTGGTTTG+GGG | 0.487876 | 7_3:+40788833 | None:intergenic |
| AGCCCTGTAGCTGAAGATAT+TGG | 0.489455 | 7_3:-40783935 | Msa1104120:CDS |
| GTGGCTAGGGTTTGGTTTGG+GGG | 0.491400 | 7_3:+40788834 | None:intergenic |
| GAATGCGAGGGATTTGGAAG+AGG | 0.493011 | 7_3:-40788326 | Msa1104120:CDS |
| AAAACGATGAAATAGAGAAA+GGG | 0.495584 | 7_3:+40788881 | None:intergenic |
| GTTTCTCCCGAACCCCACCC+TGG | 0.495802 | 7_3:-40783127 | Msa1104120:three_prime_UTR |
| GGCTTTCAACACCAATTACA+AGG | 0.496777 | 7_3:-40786166 | Msa1104120:CDS |
| GTTTAGGTGAACCGAATTTG+AGG | 0.498343 | 7_3:+40788563 | None:intergenic |
| ACAGACTACTTATTATGCTA+AGG | 0.499150 | 7_3:-40788257 | Msa1104120:CDS |
| GGATCGGATTGATGTGAGGA+TGG | 0.500510 | 7_3:+40788738 | None:intergenic |
| GGATGTTGCTATTGCTGCCA+TGG | 0.504114 | 7_3:-40783459 | Msa1104120:CDS |
| ATTGTCTTAATGTTCTGAGC+AGG | 0.507414 | 7_3:+40786940 | None:intergenic |
| GACAGATCATCCAAGCAGTC+CGG | 0.513338 | 7_3:+40785218 | None:intergenic |
| AGAATCGGATTAGTCGAGAA+AGG | 0.515768 | 7_3:-40788165 | Msa1104120:CDS |
| GTAATCCTGTAGATGAGCTT+TGG | 0.516737 | 7_3:+40786915 | None:intergenic |
| GTTGGGGTTTGGATCGATGC+CGG | 0.517454 | 7_3:-40788427 | Msa1104120:CDS |
| AACCAAACCCTAGCCACACA+CGG | 0.518504 | 7_3:-40788828 | Msa1104120:five_prime_UTR |
| AGAGGATTCGTGTGTGGTCA+CGG | 0.519419 | 7_3:+40788533 | None:intergenic |
| TAGATCATGACGTTCGGAGG+TGG | 0.522877 | 7_3:+40788649 | None:intergenic |
| GTTTATCTACATACCATCCT+AGG | 0.523412 | 7_3:+40786871 | None:intergenic |
| ATGAACGGCGGACTAGGGTG+AGG | 0.524492 | 7_3:+40788773 | None:intergenic |
| TTCAACCAACTGAGTTGCTG+TGG | 0.525634 | 7_3:+40786609 | None:intergenic |
| TGGCGACACGGAGTCCGTTA+GGG | 0.529967 | 7_3:+40788482 | None:intergenic |
| ATGTGAGGATGGGTGTCCGC+CGG | 0.532360 | 7_3:+40788749 | None:intergenic |
| AGAGACCAGAAGCCAGGGTG+GGG | 0.532899 | 7_3:+40783115 | None:intergenic |
| TATTTAAGGGGACGGAGAGG+AGG | 0.534779 | 7_3:-40788348 | Msa1104120:CDS |
| CGATCGTAGATCATGACGTT+CGG | 0.535430 | 7_3:+40788643 | None:intergenic |
| GGTGGGATTTGTTGACAACT+TGG | 0.537207 | 7_3:+40786630 | None:intergenic |
| TATTCTTAGGGAAATGGAAG+AGG | 0.540857 | 7_3:-40788137 | Msa1104120:intron |
| AATCACCAAAGCTCATCTAC+AGG | 0.542257 | 7_3:-40786920 | Msa1104120:CDS |
| TCCCAAAATGGTTCTGCCAA+GGG | 0.542944 | 7_3:+40786963 | None:intergenic |
| TTTGAGACGGAGGAGAGTAA+TGG | 0.543184 | 7_3:-40788397 | Msa1104120:CDS |
| CTCAAGGACTGCTACCGTTG+GGG | 0.547160 | 7_3:-40788443 | Msa1104120:CDS |
| AATGTATGAGACAACCAAGT+TGG | 0.550313 | 7_3:-40785186 | Msa1104120:CDS |
| TGGTGTTTATGCTGTCGCTA+AGG | 0.550888 | 7_3:-40786130 | Msa1104120:intron |
| TGAAACCTGATAAGCCAACT+TGG | 0.560316 | 7_3:+40785172 | None:intergenic |
| GCTACCGCAAATTGTGCAAG+AGG | 0.561891 | 7_3:+40786439 | None:intergenic |
| TGGAATAAGACAGCAGGAGG+GGG | 0.561986 | 7_3:-40786346 | Msa1104120:CDS |
| GTTGATCGTCATGGTGGAGA+GGG | 0.562655 | 7_3:+40788801 | None:intergenic |
| GGCAGCGGAGGTGGAGAGAG+TGG | 0.562794 | 7_3:+40788714 | None:intergenic |
| TGAAGTTGCAGAAAGCATGA+TGG | 0.563113 | 7_3:-40786187 | Msa1104120:CDS |
| AGACACATTACACTGCTCCT+AGG | 0.563685 | 7_3:-40786888 | Msa1104120:CDS |
| GGACGGAGAGGAGGAATGCG+AGG | 0.564393 | 7_3:-40788339 | Msa1104120:CDS |
| GACAAAGTCTATAGCACACT+CGG | 0.565204 | 7_3:-40788926 | Msa1104120:five_prime_UTR |
| GAATCGGATTAGTCGAGAAA+GGG | 0.565651 | 7_3:-40788164 | Msa1104120:CDS |
| GTCCCAAAATGGTTCTGCCA+AGG | 0.566241 | 7_3:+40786962 | None:intergenic |
| CGGTAGCAGTCCTTGAGCTA+AGG | 0.566416 | 7_3:+40788449 | None:intergenic |
| GGCTAGACTCCGTGGCGACA+CGG | 0.568095 | 7_3:+40788470 | None:intergenic |
| TATTATGCTAAGGTTTCGCA+AGG | 0.570942 | 7_3:-40788247 | Msa1104120:CDS |
| CAACACCAATTACAAGGACA+CGG | 0.571137 | 7_3:-40786160 | Msa1104120:CDS |
| TGTTGATCGTCATGGTGGAG+AGG | 0.571806 | 7_3:+40788800 | None:intergenic |
| AGGGGATGTGCCTGTTGCGT+TGG | 0.572773 | 7_3:-40788227 | Msa1104120:CDS |
| CATGACGTTCGGAGGTGGTG+GGG | 0.573072 | 7_3:+40788654 | None:intergenic |
| ACTGGAAAGCGGTTGCGTGT+AGG | 0.574119 | 7_3:+40786992 | None:intergenic |
| ATGGTCATGCAAGCAATGCT+GGG | 0.578859 | 7_3:-40786373 | Msa1104120:CDS |
| TGTGAGGATGGGTGTCCGCC+GGG | 0.579096 | 7_3:+40788750 | None:intergenic |
| TTATGCTAAGGTTTCGCAAG+GGG | 0.582967 | 7_3:-40788245 | Msa1104120:CDS |
| GCATATGATATTTAAGGGGA+CGG | 0.584800 | 7_3:-40788356 | Msa1104120:CDS |
| GTTGGCTTATCAGGTTTCAG+AGG | 0.585578 | 7_3:-40785168 | Msa1104120:CDS |
| TTAATTCATACAAGAATTTG+GGG | 0.585655 | 7_3:+40783175 | None:intergenic |
| GCTTTCCAGTACACTCCCCT+TGG | 0.586622 | 7_3:-40786979 | Msa1104120:CDS |
| TCATGACGTTCGGAGGTGGT+GGG | 0.587041 | 7_3:+40788653 | None:intergenic |
| GGTTCTTGGAATAAGACAGC+AGG | 0.587947 | 7_3:-40786352 | Msa1104120:CDS |
| TGGAGAGGGCTGCCCGTGTG+TGG | 0.596123 | 7_3:+40788815 | None:intergenic |
| TCAAAAGAGACCAGAAGCCA+GGG | 0.597227 | 7_3:+40783110 | None:intergenic |
| GGAAAGCGGTTGCGTGTAGG+TGG | 0.597858 | 7_3:+40786995 | None:intergenic |
| GAGGAGATTGAGAATATGGG+TGG | 0.598135 | 7_3:-40788307 | Msa1104120:CDS |
| TCGTAGATCATGACGTTCGG+AGG | 0.598880 | 7_3:+40788646 | None:intergenic |
| GATCGGATTGATGTGAGGAT+GGG | 0.599279 | 7_3:+40788739 | None:intergenic |
| TAACGGACTCCGTGTCGCCA+CGG | 0.602370 | 7_3:-40788479 | Msa1104120:CDS |
| GATGTTGCTATTGCTGCCAT+GGG | 0.603073 | 7_3:-40783458 | Msa1104120:CDS |
| AACCAACTGAGTTGCTGTGG+TGG | 0.603366 | 7_3:+40786612 | None:intergenic |
| GAGGAGTTTGTTGATCGTCA+TGG | 0.603721 | 7_3:+40788792 | None:intergenic |
| TCTGAGCTAGCACAGCGAGT+TGG | 0.603978 | 7_3:-40786216 | Msa1104120:CDS |
| AGGTGGAGAGAGTGGCGGAT+CGG | 0.604875 | 7_3:+40788722 | None:intergenic |
| CCCAAAATGGTTCTGCCAAG+GGG | 0.606028 | 7_3:+40786964 | None:intergenic |
| AAGAGACCAGAAGCCAGGGT+GGG | 0.607011 | 7_3:+40783114 | None:intergenic |
| ACCAACTGAGTTGCTGTGGT+GGG | 0.607905 | 7_3:+40786613 | None:intergenic |
| GAACTAATAGCGGTTCCAGT+AGG | 0.607907 | 7_3:+40783391 | None:intergenic |
| ACATTACACTGCTCCTAGGA+TGG | 0.609322 | 7_3:-40786884 | Msa1104120:intron |
| TGCCGGTTCGAGATTTGAGA+CGG | 0.609632 | 7_3:-40788410 | Msa1104120:CDS |
| TGGAGCATATGATATTTAAG+GGG | 0.611078 | 7_3:-40788360 | Msa1104120:CDS |
| ACCAAACCCTAGCCACACAC+GGG | 0.612225 | 7_3:-40788827 | Msa1104120:five_prime_UTR |
| AGGAGATTGAGAATATGGGT+GGG | 0.612564 | 7_3:-40788306 | Msa1104120:CDS |
| CGCATCACAACTCTCCCTAA+CGG | 0.612727 | 7_3:-40788496 | Msa1104120:CDS |
| ATTATGCTAAGGTTTCGCAA+GGG | 0.613708 | 7_3:-40788246 | Msa1104120:CDS |
| AAACCGATTTATTTATGACA+AGG | 0.619571 | 7_3:-40783567 | Msa1104120:intron |
| TCCCACCACAGCAACTCAGT+TGG | 0.620192 | 7_3:-40786614 | Msa1104120:CDS |
| TCTTGGAATAAGACAGCAGG+AGG | 0.621637 | 7_3:-40786349 | Msa1104120:CDS |
| AACACCAATTACAAGGACAC+GGG | 0.626009 | 7_3:-40786159 | Msa1104120:CDS |
| GACGGAGAGGAGGAATGCGA+GGG | 0.628316 | 7_3:-40788338 | Msa1104120:CDS |
| TTGGAATAAGACAGCAGGAG+GGG | 0.635884 | 7_3:-40786347 | Msa1104120:CDS |
| GACCAATATCTTCAGCTACA+GGG | 0.642469 | 7_3:+40783933 | None:intergenic |
| AAACTAAGATGAACTAATAG+CGG | 0.642849 | 7_3:+40783381 | None:intergenic |
| GTGTCCGCCGGGATGAACGG+CGG | 0.642933 | 7_3:+40788761 | None:intergenic |
| CCAAATGCACTAAATCAATG+AGG | 0.645263 | 7_3:+40783080 | None:intergenic |
| CTTGGAATAAGACAGCAGGA+GGG | 0.645316 | 7_3:-40786348 | Msa1104120:CDS |
| TAAACGCTGAATAGGTCCCA+TGG | 0.648283 | 7_3:+40783442 | None:intergenic |
| AAAGAGACCAGAAGCCAGGG+TGG | 0.649646 | 7_3:+40783113 | None:intergenic |
| TGATATTTAAGGGGACGGAG+AGG | 0.657266 | 7_3:-40788351 | Msa1104120:CDS |
| AAGGGGAGTGTACTGGAAAG+CGG | 0.657512 | 7_3:+40786981 | None:intergenic |
| ACTCCATATATGCCTCTGGA+TGG | 0.664489 | 7_3:-40783307 | Msa1104120:three_prime_UTR |
| GAGCGGAGAGGATTCGTGTG+TGG | 0.666040 | 7_3:+40788527 | None:intergenic |
| TGCGAGTTTCAGGAGCGGAG+AGG | 0.669751 | 7_3:+40788515 | None:intergenic |
| GGCCTAAACAGGCCATCCAG+AGG | 0.673346 | 7_3:+40783295 | None:intergenic |
| TGTGATGCGAGTTTCAGGAG+CGG | 0.673954 | 7_3:+40788510 | None:intergenic |
| CGGTTCGAGATTTGAGACGG+AGG | 0.674101 | 7_3:-40788407 | Msa1104120:CDS |
| TGAGCTAAGGCTAGACTCCG+TGG | 0.675517 | 7_3:+40788462 | None:intergenic |
| GAACCGAATTTGAGGAAACG+TGG | 0.678087 | 7_3:+40788571 | None:intergenic |
| GTAGGTTGAGGGCCAAACAG+AGG | 0.679038 | 7_3:-40787031 | Msa1104120:intron |
| AGCGGAGGTGGAGAGAGTGG+CGG | 0.691471 | 7_3:+40788717 | None:intergenic |
| GAGTTTGTTGATCGTCATGG+TGG | 0.694220 | 7_3:+40788795 | None:intergenic |
| GGCATCGATCCAAACCCCAA+CGG | 0.698937 | 7_3:+40788429 | None:intergenic |
| TGGCGGATCGGATTGATGTG+AGG | 0.715947 | 7_3:+40788734 | None:intergenic |
| TAGTCCGCCGTTCATCCCGG+CGG | 0.725807 | 7_3:-40788765 | Msa1104120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAATTAAGACAAAAT+AGG | + | chr7_3:40784888-40784907 | None:intergenic | 10.0% |
| !! | TTAAATATTATAACCTATAA+TGG | - | chr7_3:40786165-40786184 | Msa1104120:CDS | 10.0% |
| !!! | TAATTTTTATCATTCAAAAT+TGG | + | chr7_3:40787227-40787246 | None:intergenic | 10.0% |
| !! | TGCAAATTAAATTAATTTAT+GGG | - | chr7_3:40787335-40787354 | Msa1104120:intron | 10.0% |
| !! | AATAAGTATGAAATATTAAA+TGG | + | chr7_3:40788303-40788322 | None:intergenic | 10.0% |
| !!! | ATTTTTCATTTATTTGTTAT+AGG | - | chr7_3:40788724-40788743 | Msa1104120:CDS | 10.0% |
| !!! | GAGTAAAAAATTAGATTTTA+AGG | - | chr7_3:40784365-40784384 | Msa1104120:intron | 15.0% |
| !!! | ATTTTTTTTTTGTTGTTGTA+AGG | - | chr7_3:40784428-40784447 | Msa1104120:intron | 15.0% |
| !! | ATTATTACAACAACAAATAT+CGG | + | chr7_3:40784648-40784667 | None:intergenic | 15.0% |
| !! | GTTGTTGTAATAATAATAAT+TGG | - | chr7_3:40784654-40784673 | Msa1104120:intron | 15.0% |
| !!! | GTCTTAATTTTTTATTTGTT+TGG | - | chr7_3:40784893-40784912 | Msa1104120:intron | 15.0% |
| !! | TAATATATAAATATGGAAGT+TGG | - | chr7_3:40785239-40785258 | Msa1104120:intron | 15.0% |
| !!! | TTTGAAACTATAATAGTTAA+TGG | - | chr7_3:40786452-40786471 | Msa1104120:CDS | 15.0% |
| !! | GTGCAAATTAAATTAATTTA+TGG | - | chr7_3:40787334-40787353 | Msa1104120:intron | 15.0% |
| !! | GCAAATTAAATTAATTTATG+GGG | - | chr7_3:40787336-40787355 | Msa1104120:intron | 15.0% |
| !! | CAAATTAAATTAATTTATGG+GGG | - | chr7_3:40787337-40787356 | Msa1104120:intron | 15.0% |
| !! | AACAAATAAATGAAAAATGA+TGG | + | chr7_3:40788722-40788741 | None:intergenic | 15.0% |
| !! | ATTAATTCATACAAGAATTT+GGG | + | chr7_3:40788822-40788841 | None:intergenic | 15.0% |
| !! | TATTAATTCATACAAGAATT+TGG | + | chr7_3:40788823-40788842 | None:intergenic | 15.0% |
| !! | TATGAAAAAACAACTTATGA+AGG | - | chr7_3:40784206-40784225 | Msa1104120:intron | 20.0% |
| !!! | ATTTTGAAGCCTTTTTTATT+TGG | - | chr7_3:40784553-40784572 | Msa1104120:intron | 20.0% |
| !!! | GATTTCTAAATCCTTTTTAA+AGG | + | chr7_3:40784835-40784854 | None:intergenic | 20.0% |
| !! | GATTTAGAAATCAGAAAAAA+AGG | - | chr7_3:40784843-40784862 | Msa1104120:intron | 20.0% |
| !!! | TAAATGATATTGCTTTTTGT+AGG | - | chr7_3:40784944-40784963 | Msa1104120:intron | 20.0% |
| !! | ATAAATCAACTATATCAACA+GGG | + | chr7_3:40785478-40785497 | None:intergenic | 20.0% |
| !! | AATAAATCAACTATATCAAC+AGG | + | chr7_3:40785479-40785498 | None:intergenic | 20.0% |
| !! | AGGAGAAAAGAAATTATATT+TGG | + | chr7_3:40786392-40786411 | None:intergenic | 20.0% |
| !!! | TTTTTATCATTCAAAATTGG+TGG | + | chr7_3:40787224-40787243 | None:intergenic | 20.0% |
| !!! | GATAAGCATTTTAACTAAAT+TGG | + | chr7_3:40787694-40787713 | None:intergenic | 20.0% |
| !! | TTACCTTGTCATAAATAAAT+CGG | + | chr7_3:40788432-40788451 | None:intergenic | 20.0% |
| !! | TGCATAAATATTACAAAAAC+AGG | + | chr7_3:40788750-40788769 | None:intergenic | 20.0% |
| !! | TTAATTCATACAAGAATTTG+GGG | + | chr7_3:40788821-40788840 | None:intergenic | 20.0% |
| ! | AAAACGATGAAATAGAGAAA+GGG | + | chr7_3:40783115-40783134 | None:intergenic | 25.0% |
| ! | AAAAACGATGAAATAGAGAA+AGG | + | chr7_3:40783116-40783135 | None:intergenic | 25.0% |
| !! | TTTGGAGCATATGATATTTA+AGG | - | chr7_3:40783631-40783650 | Msa1104120:CDS | 25.0% |
| ! | TTGGAGCATATGATATTTAA+GGG | - | chr7_3:40783632-40783651 | Msa1104120:CDS | 25.0% |
| ! | ATTCAAAGTTTGATGAGAAT+CGG | - | chr7_3:40783813-40783832 | Msa1104120:intron | 25.0% |
| !!! | TTGACATAAGTTTTAGCTTA+TGG | - | chr7_3:40784004-40784023 | Msa1104120:intron | 25.0% |
| !!! | TGACATAAGTTTTAGCTTAT+GGG | - | chr7_3:40784005-40784024 | Msa1104120:intron | 25.0% |
| !!! | ACTTATTGCGATTTTTTTGT+GGG | - | chr7_3:40784130-40784149 | Msa1104120:intron | 25.0% |
| ! | CTAATTTATTTGCCCAAAAT+AGG | + | chr7_3:40784177-40784196 | None:intergenic | 25.0% |
| !!! | TGGCTTATTTTTTTAGCTTA+TGG | + | chr7_3:40784285-40784304 | None:intergenic | 25.0% |
| ! | AAAAAGGCTTCAAAATAGAA+TGG | + | chr7_3:40784549-40784568 | None:intergenic | 25.0% |
| ! | TCTACACATCCAAATAAAAA+AGG | + | chr7_3:40784565-40784584 | None:intergenic | 25.0% |
| !! | GAATGAGCTATATTTTACAT+TGG | + | chr7_3:40784767-40784786 | None:intergenic | 25.0% |
| ! | AAGTATAGTCCAATAGATAA+AGG | - | chr7_3:40784789-40784808 | Msa1104120:intron | 25.0% |
| !!! | AATTTTACTTTGTTGATTGG+GGG | + | chr7_3:40785708-40785727 | None:intergenic | 25.0% |
| !!! | GAATTTTACTTTGTTGATTG+GGG | + | chr7_3:40785709-40785728 | None:intergenic | 25.0% |
| !!! | GGAATTTTACTTTGTTGATT+GGG | + | chr7_3:40785710-40785729 | None:intergenic | 25.0% |
| ! | ATCCATAAGAAAACCAAATT+AGG | + | chr7_3:40785894-40785913 | None:intergenic | 25.0% |
| ! | TGTTAAACAAAGTAGTACAT+TGG | - | chr7_3:40785918-40785937 | Msa1104120:intron | 25.0% |
| ! | ATCTATGAAAAACTACAAGA+GGG | + | chr7_3:40786021-40786040 | None:intergenic | 25.0% |
| ! | TATCTATGAAAAACTACAAG+AGG | + | chr7_3:40786022-40786041 | None:intergenic | 25.0% |
| !!! | GTTGTATTTAACTTGTCAAT+CGG | - | chr7_3:40786075-40786094 | Msa1104120:intron | 25.0% |
| ! | TATCTTCAATAGACCATTAT+AGG | + | chr7_3:40786181-40786200 | None:intergenic | 25.0% |
| ! | AGGTTATTTAACAAATTCAG+TGG | + | chr7_3:40786207-40786226 | None:intergenic | 25.0% |
| !!! | TTTTAGTTAGATTCAGTGAT+TGG | - | chr7_3:40786264-40786283 | Msa1104120:intron | 25.0% |
| ! | AAAAATAAAGTAGAAGTCCT+TGG | + | chr7_3:40786420-40786439 | None:intergenic | 25.0% |
| ! | TTGCTAATTGAATATGACAA+TGG | - | chr7_3:40786907-40786926 | Msa1104120:CDS | 25.0% |
| ! | TTGAATATGACAATGGAATT+TGG | - | chr7_3:40786914-40786933 | Msa1104120:CDS | 25.0% |
| !! | GCTTTATATTAAGAAGCTTT+TGG | - | chr7_3:40786942-40786961 | Msa1104120:CDS | 25.0% |
| !!! | CTACAGAGTTAATTTTGTTT+TGG | - | chr7_3:40786989-40787008 | Msa1104120:CDS | 25.0% |
| !!! | ATTGAGGAAGTATTGAATTT+AGG | + | chr7_3:40787092-40787111 | None:intergenic | 25.0% |
| ! | AGTAACTAAGAATTAGATTG+AGG | + | chr7_3:40787108-40787127 | None:intergenic | 25.0% |
| !!! | GTTACTAGTTTCTTTAAGAT+AGG | - | chr7_3:40787122-40787141 | Msa1104120:intron | 25.0% |
| !! | ATTTATGATGCCATATTTTG+TGG | - | chr7_3:40787289-40787308 | Msa1104120:intron | 25.0% |
| ! | TAAAGAAAGACCACAAAATA+TGG | + | chr7_3:40787302-40787321 | None:intergenic | 25.0% |
| ! | ACTATGACATGAAAAATGTA+AGG | + | chr7_3:40787605-40787624 | None:intergenic | 25.0% |
| ! | CATTCAAACTAAATTTCTGA+TGG | - | chr7_3:40787772-40787791 | Msa1104120:intron | 25.0% |
| ! | TCATTCTCTACTATTATACA+AGG | - | chr7_3:40788142-40788161 | Msa1104120:CDS | 25.0% |
| ! | TACTATTATACAAGGACTTT+AGG | - | chr7_3:40788150-40788169 | Msa1104120:CDS | 25.0% |
| ! | TGAAATATTAAATGGTAGCA+CGG | + | chr7_3:40788295-40788314 | None:intergenic | 25.0% |
| !! | AAACCGATTTATTTATGACA+AGG | - | chr7_3:40788426-40788445 | Msa1104120:CDS | 25.0% |
| ! | AAACTAAGATGAACTAATAG+CGG | + | chr7_3:40788615-40788634 | None:intergenic | 25.0% |
| ! | TGTGCTCAATTTAAACTTAA+TGG | - | chr7_3:40788635-40788654 | Msa1104120:CDS | 25.0% |
| ! | TTTAAACTTAATGGAATGTC+TGG | - | chr7_3:40788644-40788663 | Msa1104120:CDS | 25.0% |
| !!! | TAATGGAACTGCTCATTTTT+TGG | - | chr7_3:40783613-40783632 | Msa1104120:CDS | 30.0% |
| TGGAGCATATGATATTTAAG+GGG | - | chr7_3:40783633-40783652 | Msa1104120:CDS | 30.0% | |
| ACAGACTACTTATTATGCTA+AGG | - | chr7_3:40783736-40783755 | Msa1104120:intron | 30.0% | |
| AGAAAGGGATGTTATTCTTA+GGG | - | chr7_3:40783844-40783863 | Msa1104120:intron | 30.0% | |
| !! | TTTAACATGTTTGTTGTGAG+TGG | - | chr7_3:40783953-40783972 | Msa1104120:CDS | 30.0% |
| !!! | GACTTATTGCGATTTTTTTG+TGG | - | chr7_3:40784129-40784148 | Msa1104120:intron | 30.0% |
| !!! | CGATTTTTTTGTGGGATTTT+GGG | - | chr7_3:40784138-40784157 | Msa1104120:intron | 30.0% |
| ATGTGTAGAAGTTGTAGTAT+TGG | - | chr7_3:40784576-40784595 | Msa1104120:intron | 30.0% | |
| TTACAACAACAAATATCGGT+GGG | + | chr7_3:40784644-40784663 | None:intergenic | 30.0% | |
| ATTACAACAACAAATATCGG+TGG | + | chr7_3:40784645-40784664 | None:intergenic | 30.0% | |
| !! | TCAACTTTTAGAGACAATGT+CGG | - | chr7_3:40784680-40784699 | Msa1104120:intron | 30.0% |
| AGAATCTCTTGTTGAATAGA+TGG | - | chr7_3:40784706-40784725 | Msa1104120:intron | 30.0% | |
| TCTACTCTACCTTTATCTAT+TGG | + | chr7_3:40784801-40784820 | None:intergenic | 30.0% | |
| !! | CCTTTTTAAAGGTTTTTCTC+TGG | + | chr7_3:40784824-40784843 | None:intergenic | 30.0% |
| ! | CCAGAGAAAAACCTTTAAAA+AGG | - | chr7_3:40784821-40784840 | Msa1104120:intron | 30.0% |
| !!! | ATATTGCTTTTTGTAGGTTG+AGG | - | chr7_3:40784950-40784969 | Msa1104120:intron | 30.0% |
| !!! | TATTGCTTTTTGTAGGTTGA+GGG | - | chr7_3:40784951-40784970 | Msa1104120:intron | 30.0% |
| TCAACTGAGCTCAAAATTAT+TGG | + | chr7_3:40785455-40785474 | None:intergenic | 30.0% | |
| ! | GGGAATTTTACTTTGTTGAT+TGG | + | chr7_3:40785711-40785730 | None:intergenic | 30.0% |
| TAAGCAAAGCATGTATCATT+GGG | + | chr7_3:40785733-40785752 | None:intergenic | 30.0% | |
| !!! | GACCTAATTTGGTTTTCTTA+TGG | - | chr7_3:40785889-40785908 | Msa1104120:intron | 30.0% |
| AAGAGGGATATATGTTCATT+TGG | + | chr7_3:40786005-40786024 | None:intergenic | 30.0% | |
| TCTAAAAGTTGGATCATTGA+AGG | + | chr7_3:40786227-40786246 | None:intergenic | 30.0% | |
| ! | ACACATACACTTCTAAAAGT+TGG | + | chr7_3:40786238-40786257 | None:intergenic | 30.0% |
| ! | TTCTTTTCTCCTTTTATCCA+AGG | - | chr7_3:40786400-40786419 | Msa1104120:CDS | 30.0% |
| CTTATGTCTTTCTATGCAAT+AGG | - | chr7_3:40786537-40786556 | Msa1104120:intron | 30.0% | |
| ATGTCTTTCTATGCAATATG+TGG | - | chr7_3:40786605-40786624 | Msa1104120:CDS | 30.0% | |
| TCATATTCAATTAGCAAGAC+AGG | + | chr7_3:40786904-40786923 | None:intergenic | 30.0% | |
| TTAACTCTGTAGTTGTATCT+TGG | + | chr7_3:40786981-40787000 | None:intergenic | 30.0% | |
| GAATATATGCAACTAAGTCT+TGG | - | chr7_3:40787404-40787423 | Msa1104120:intron | 30.0% | |
| GATAATAAAATTAACCAGCC+AGG | + | chr7_3:40787449-40787468 | None:intergenic | 30.0% | |
| ! | TGTTTTCATGCTCTTGATTT+TGG | - | chr7_3:40787650-40787669 | Msa1104120:intron | 30.0% |
| TTGAACGTGCTAATTCAATA+TGG | + | chr7_3:40787734-40787753 | None:intergenic | 30.0% | |
| ! | TTCTGCACATAATCTTTTGA+AGG | + | chr7_3:40787808-40787827 | None:intergenic | 30.0% |
| AGATTATGTGCAGAATATGA+AGG | - | chr7_3:40787813-40787832 | Msa1104120:intron | 30.0% | |
| AAAAACAGCATAGATGTTTG+AGG | + | chr7_3:40787882-40787901 | None:intergenic | 30.0% | |
| TAGCAAACAATTCAGCAAAT+GGG | + | chr7_3:40788366-40788385 | None:intergenic | 30.0% | |
| CCATTAGCACTTAAAAAGAT+TGG | + | chr7_3:40788493-40788512 | None:intergenic | 30.0% | |
| !!! | CCAATCTTTTTAAGTGCTAA+TGG | - | chr7_3:40788490-40788509 | Msa1104120:CDS | 30.0% |
| !!! | GAGTTTTTGTTTGACGGATT+CGG | + | chr7_3:40783381-40783400 | None:intergenic | 35.0% |
| GCATATGATATTTAAGGGGA+CGG | - | chr7_3:40783637-40783656 | Msa1104120:CDS | 35.0% | |
| GAAGAGGAGATTGAGAATAT+GGG | - | chr7_3:40783683-40783702 | Msa1104120:intron | 35.0% | |
| TATTATGCTAAGGTTTCGCA+AGG | - | chr7_3:40783746-40783765 | Msa1104120:intron | 35.0% | |
| ATTATGCTAAGGTTTCGCAA+GGG | - | chr7_3:40783747-40783766 | Msa1104120:intron | 35.0% | |
| GAGAAAGGGATGTTATTCTT+AGG | - | chr7_3:40783843-40783862 | Msa1104120:intron | 35.0% | |
| GGATGTTATTCTTAGGGAAA+TGG | - | chr7_3:40783850-40783869 | Msa1104120:intron | 35.0% | |
| TATTCTTAGGGAAATGGAAG+AGG | - | chr7_3:40783856-40783875 | Msa1104120:intron | 35.0% | |
| !!! | GCGATTTTTTTGTGGGATTT+TGG | - | chr7_3:40784137-40784156 | Msa1104120:intron | 35.0% |
| !!! | TGTTTGGATTGGCCTATTTT+GGG | - | chr7_3:40784162-40784181 | Msa1104120:intron | 35.0% |
| ACTCATTGAACACACAAAAC+AGG | + | chr7_3:40784349-40784368 | None:intergenic | 35.0% | |
| !! | GTACAGATTTTAAGAACTGC+CGG | - | chr7_3:40784471-40784490 | Msa1104120:intron | 35.0% |
| !! | TACAGATTTTAAGAACTGCC+GGG | - | chr7_3:40784472-40784491 | Msa1104120:intron | 35.0% |
| !! | AAGTTGTAGTATTGGCAGTT+AGG | - | chr7_3:40784584-40784603 | Msa1104120:intron | 35.0% |
| !! | AGTTGTAGTATTGGCAGTTA+GGG | - | chr7_3:40784585-40784604 | Msa1104120:intron | 35.0% |
| !! | CAACTTTTAGAGACAATGTC+GGG | - | chr7_3:40784681-40784700 | Msa1104120:intron | 35.0% |
| !! | AACTTTTAGAGACAATGTCG+GGG | - | chr7_3:40784682-40784701 | Msa1104120:intron | 35.0% |
| GTTGAATAGATGGTAGAATG+TGG | - | chr7_3:40784716-40784735 | Msa1104120:intron | 35.0% | |
| ! | GTTCTCATTCTTTTGCTGAA+AGG | - | chr7_3:40784915-40784934 | Msa1104120:intron | 35.0% |
| ! | ATTGTCTTAATGTTCTGAGC+AGG | + | chr7_3:40785056-40785075 | None:intergenic | 35.0% |
| GTTTATCTACATACCATCCT+AGG | + | chr7_3:40785125-40785144 | None:intergenic | 35.0% | |
| ! | AAGGAACCTGCAATTTTTAC+TGG | - | chr7_3:40785407-40785426 | Msa1104120:intron | 35.0% |
| TCAGAACCAGTAAAAATTGC+AGG | + | chr7_3:40785416-40785435 | None:intergenic | 35.0% | |
| !!! | TGCAATTTTTACTGGTTCTG+AGG | - | chr7_3:40785415-40785434 | Msa1104120:intron | 35.0% |
| ! | ACTCGTTTTGTAAACAGGTT+CGG | - | chr7_3:40785513-40785532 | Msa1104120:intron | 35.0% |
| TATTCCTCTTGCACAATTTG+CGG | - | chr7_3:40785550-40785569 | Msa1104120:intron | 35.0% | |
| TCCTGATTCAATTGCTTTGA+TGG | - | chr7_3:40785601-40785620 | Msa1104120:intron | 35.0% | |
| ACCATCAAAGCAATTGAATC+AGG | + | chr7_3:40785605-40785624 | None:intergenic | 35.0% | |
| AAGCAAAGCATGTATCATTG+GGG | + | chr7_3:40785732-40785751 | None:intergenic | 35.0% | |
| GTAAGCAAAGCATGTATCAT+TGG | + | chr7_3:40785734-40785753 | None:intergenic | 35.0% | |
| AGTAGAAGTCCTTGGATAAA+AGG | + | chr7_3:40786412-40786431 | None:intergenic | 35.0% | |
| GTGTCTTTCTTCACAATATG+CGG | - | chr7_3:40786474-40786493 | Msa1104120:intron | 35.0% | |
| ATGTCTTTCTATGCAATAGG+TGG | - | chr7_3:40786540-40786559 | Msa1104120:intron | 35.0% | |
| TCTTTCTATGCAATATGTGG+TGG | - | chr7_3:40786608-40786627 | Msa1104120:CDS | 35.0% | |
| AATGTATGAGACAACCAAGT+TGG | - | chr7_3:40786807-40786826 | Msa1104120:intron | 35.0% | |
| GTTTAGCATATTGCATCATC+TGG | - | chr7_3:40787021-40787040 | Msa1104120:CDS | 35.0% | |
| CATGGGTGAAATTTGAATCA+CGG | + | chr7_3:40787161-40787180 | None:intergenic | 35.0% | |
| ATGTCATATGCGTTCATCAT+GGG | + | chr7_3:40787178-40787197 | None:intergenic | 35.0% | |
| AATGTCATATGCGTTCATCA+TGG | + | chr7_3:40787179-40787198 | None:intergenic | 35.0% | |
| !! | CAACTGACATTTGTTGTCAT+TGG | - | chr7_3:40787261-40787280 | Msa1104120:intron | 35.0% |
| CAATAAGCTATGAATCAGGA+AGG | + | chr7_3:40787516-40787535 | None:intergenic | 35.0% | |
| ACAGCAATAAGCTATGAATC+AGG | + | chr7_3:40787520-40787539 | None:intergenic | 35.0% | |
| ! | ATGAATCCAGAGGTGTAAAA+TGG | - | chr7_3:40787544-40787563 | Msa1104120:intron | 35.0% |
| ! | TGAATCCAGAGGTGTAAAAT+GGG | - | chr7_3:40787545-40787564 | Msa1104120:intron | 35.0% |
| GTGCTAATTCAATATGGCAT+GGG | + | chr7_3:40787728-40787747 | None:intergenic | 35.0% | |
| GAACAATCCAATGAACTACT+AGG | + | chr7_3:40787843-40787862 | None:intergenic | 35.0% | |
| ! | TAGATGTTTGAGGAGTATGA+AGG | + | chr7_3:40787872-40787891 | None:intergenic | 35.0% |
| TTGTTTCAGCTACTCACATA+TGG | - | chr7_3:40788331-40788350 | Msa1104120:CDS | 35.0% | |
| CTAGCAAACAATTCAGCAAA+TGG | + | chr7_3:40788367-40788386 | None:intergenic | 35.0% | |
| TGCAACACGTTTAATTGTAC+TGG | + | chr7_3:40788407-40788426 | None:intergenic | 35.0% | |
| TAATCAGGTAAACGCTGAAT+AGG | + | chr7_3:40788562-40788581 | None:intergenic | 35.0% | |
| TGAAAAATGATGGCCTAAAC+AGG | + | chr7_3:40788712-40788731 | None:intergenic | 35.0% | |
| ! | GGAGAAACCAAGCAATTTTA+GGG | + | chr7_3:40788854-40788873 | None:intergenic | 35.0% |
| CCAAATGCACTAAATCAATG+AGG | + | chr7_3:40788916-40788935 | None:intergenic | 35.0% | |
| !! | CCTCATTGATTTAGTGCATT+TGG | - | chr7_3:40788913-40788932 | Msa1104120:five_prime_UTR | 35.0% |
| !! | GCGTTGGAGTTTTTGTTTGA+CGG | + | chr7_3:40783387-40783406 | None:intergenic | 40.0% |
| ! | GATCTGGATTTTCTAAGCGT+TGG | + | chr7_3:40783403-40783422 | None:intergenic | 40.0% |
| AATTTGAGGAAACGTGGATC+TGG | + | chr7_3:40783419-40783438 | None:intergenic | 40.0% | |
| GATCCACGTTTCCTCAAATT+CGG | - | chr7_3:40783419-40783438 | Msa1104120:CDS | 40.0% | |
| GTTTAGGTGAACCGAATTTG+AGG | + | chr7_3:40783433-40783452 | None:intergenic | 40.0% | |
| GGAAGAGGAGATTGAGAATA+TGG | - | chr7_3:40783682-40783701 | Msa1104120:intron | 40.0% | |
| AGGAGATTGAGAATATGGGT+GGG | - | chr7_3:40783687-40783706 | Msa1104120:intron | 40.0% | |
| TTATGCTAAGGTTTCGCAAG+GGG | - | chr7_3:40783748-40783767 | Msa1104120:intron | 40.0% | |
| !! | AGAATCGGATTAGTCGAGAA+AGG | - | chr7_3:40783828-40783847 | Msa1104120:intron | 40.0% |
| !! | GAATCGGATTAGTCGAGAAA+GGG | - | chr7_3:40783829-40783848 | Msa1104120:intron | 40.0% |
| !! | CATGTTTGTTGTGAGTGGTT+TGG | - | chr7_3:40783958-40783977 | Msa1104120:CDS | 40.0% |
| ! | TTGTTGTGAGTGGTTTGGAT+TGG | - | chr7_3:40783963-40783982 | Msa1104120:CDS | 40.0% |
| !!! | CTGTTTGGATTGGCCTATTT+TGG | - | chr7_3:40784161-40784180 | Msa1104120:intron | 40.0% |
| !! | AGCAAAGGGTTAGTTTGGAT+TGG | + | chr7_3:40784305-40784324 | None:intergenic | 40.0% |
| !! | TTCTCAGCAAAGGGTTAGTT+TGG | + | chr7_3:40784310-40784329 | None:intergenic | 40.0% |
| TGTCAGCTATTCTCAGCAAA+GGG | + | chr7_3:40784319-40784338 | None:intergenic | 40.0% | |
| !! | GTTGTAGTATTGGCAGTTAG+GGG | - | chr7_3:40784586-40784605 | Msa1104120:intron | 40.0% |
| AGATGGTAGAATGTGGAAAC+AGG | - | chr7_3:40784723-40784742 | Msa1104120:intron | 40.0% | |
| CAAAGATCACTTCCTCTGTT+TGG | + | chr7_3:40784977-40784996 | None:intergenic | 40.0% | |
| AATCACCAAAGCTCATCTAC+AGG | - | chr7_3:40785073-40785092 | Msa1104120:intron | 40.0% | |
| GTAATCCTGTAGATGAGCTT+TGG | + | chr7_3:40785081-40785100 | None:intergenic | 40.0% | |
| CTGATCATGTATAGTGTCCA+TGG | - | chr7_3:40785165-40785184 | Msa1104120:CDS | 40.0% | |
| ! | CTGATGTCTGTTTTCTGTGT+GGG | - | chr7_3:40785263-40785282 | Msa1104120:intron | 40.0% |
| AGCAACTCAGTTGGTTGAAA+AGG | - | chr7_3:40785388-40785407 | Msa1104120:intron | 40.0% | |
| CTGTTTACAAAACGAGTGGA+TGG | + | chr7_3:40785510-40785529 | None:intergenic | 40.0% | |
| ! | CATCCACTCGTTTTGTAAAC+AGG | - | chr7_3:40785508-40785527 | Msa1104120:intron | 40.0% |
| GAACCTGTTTACAAAACGAG+TGG | + | chr7_3:40785514-40785533 | None:intergenic | 40.0% | |
| ! | CAATTTGCGGTAGCTTTTGA+AGG | - | chr7_3:40785563-40785582 | Msa1104120:intron | 40.0% |
| !!! | TAGCTTTTGAAGGAGCATCT+TGG | - | chr7_3:40785573-40785592 | Msa1104120:intron | 40.0% |
| ! | TTTACTTTGTTGATTGGGGG+AGG | + | chr7_3:40785705-40785724 | None:intergenic | 40.0% |
| AGCAAAGCATGTATCATTGG+GGG | + | chr7_3:40785731-40785750 | None:intergenic | 40.0% | |
| ! | TGAAGTTGCAGAAAGCATGA+TGG | - | chr7_3:40785806-40785825 | Msa1104120:intron | 40.0% |
| GGCTTTCAACACCAATTACA+AGG | - | chr7_3:40785827-40785846 | Msa1104120:intron | 40.0% | |
| CAACACCAATTACAAGGACA+CGG | - | chr7_3:40785833-40785852 | Msa1104120:intron | 40.0% | |
| AACACCAATTACAAGGACAC+GGG | - | chr7_3:40785834-40785853 | Msa1104120:intron | 40.0% | |
| CGCTAAGGTAAGACCTAATT+TGG | - | chr7_3:40785878-40785897 | Msa1104120:intron | 40.0% | |
| ACATTCCATGTCTTCCTCTT+GGG | + | chr7_3:40785973-40785992 | None:intergenic | 40.0% | |
| TCTTTCTTCACAATATGCGG+TGG | - | chr7_3:40786477-40786496 | Msa1104120:intron | 40.0% | |
| TCTTTCTATGCAATAGGTGG+TGG | - | chr7_3:40786543-40786562 | Msa1104120:intron | 40.0% | |
| !! | TAATTTGTTGTGCTCTCAGC+CGG | - | chr7_3:40786756-40786775 | Msa1104120:intron | 40.0% |
| TGAAACCTGATAAGCCAACT+TGG | + | chr7_3:40786824-40786843 | None:intergenic | 40.0% | |
| GTTCGTCAAAATACAGTTGC+AGG | + | chr7_3:40787059-40787078 | None:intergenic | 40.0% | |
| TGCTGTGTTAATGAATCCAG+AGG | - | chr7_3:40787534-40787553 | Msa1104120:intron | 40.0% | |
| ! | ACATTCCCATTTTACACCTC+TGG | + | chr7_3:40787553-40787572 | None:intergenic | 40.0% |
| CGTGCTAATTCAATATGGCA+TGG | + | chr7_3:40787729-40787748 | None:intergenic | 40.0% | |
| AGGTATGCCTAGTAGTTCAT+TGG | - | chr7_3:40787833-40787852 | Msa1104120:intron | 40.0% | |
| TACGTGAGATGTAAGGTCTA+TGG | + | chr7_3:40788094-40788113 | None:intergenic | 40.0% | |
| AATGCACTACGTGAGATGTA+AGG | + | chr7_3:40788101-40788120 | None:intergenic | 40.0% | |
| TCATTTCATGTCTGTCTTGC+AGG | - | chr7_3:40788513-40788532 | Msa1104120:CDS | 40.0% | |
| AGCGTTTACCTGATTACAAC+TGG | - | chr7_3:40788566-40788585 | Msa1104120:CDS | 40.0% | |
| ATGTACTCCATATATGCCTC+TGG | - | chr7_3:40788682-40788701 | Msa1104120:CDS | 40.0% | |
| GCTGTTGTCAGTGATGTAAA+TGG | - | chr7_3:40788781-40788800 | Msa1104120:CDS | 40.0% | |
| TGCATTGCCCTAAAATTGCT+TGG | - | chr7_3:40788844-40788863 | Msa1104120:five_prime_UTR | 40.0% | |
| ! | GGGAGAAACCAAGCAATTTT+AGG | + | chr7_3:40788855-40788874 | None:intergenic | 40.0% |
| !! | GAGTTTGTTGATCGTCATGG+TGG | + | chr7_3:40783201-40783220 | None:intergenic | 45.0% |
| !! | GAGGAGTTTGTTGATCGTCA+TGG | + | chr7_3:40783204-40783223 | None:intergenic | 45.0% |
| GATCGGATTGATGTGAGGAT+GGG | + | chr7_3:40783257-40783276 | None:intergenic | 45.0% | |
| CGATCGTAGATCATGACGTT+CGG | + | chr7_3:40783353-40783372 | None:intergenic | 45.0% | |
| GAACCGAATTTGAGGAAACG+TGG | + | chr7_3:40783425-40783444 | None:intergenic | 45.0% | |
| AGAGTTGTGATGCGAGTTTC+AGG | + | chr7_3:40783491-40783510 | None:intergenic | 45.0% | |
| ! | TTTGAGACGGAGGAGAGTAA+TGG | - | chr7_3:40783596-40783615 | Msa1104120:CDS | 45.0% |
| TGATATTTAAGGGGACGGAG+AGG | - | chr7_3:40783642-40783661 | Msa1104120:CDS | 45.0% | |
| GAGGAGATTGAGAATATGGG+TGG | - | chr7_3:40783686-40783705 | Msa1104120:intron | 45.0% | |
| ! | GCCTGTTGCGTTGGATATTT+TGG | - | chr7_3:40783775-40783794 | Msa1104120:intron | 45.0% |
| GCCAAAATATCCAACGCAAC+AGG | + | chr7_3:40783779-40783798 | None:intergenic | 45.0% | |
| ! | TTGTGGGATTTTGGGCTGTT+TGG | - | chr7_3:40784146-40784165 | Msa1104120:intron | 45.0% |
| ! | GGATTTTGGGCTGTTTGGAT+TGG | - | chr7_3:40784151-40784170 | Msa1104120:intron | 45.0% |
| CTGTCAGCTATTCTCAGCAA+AGG | + | chr7_3:40784320-40784339 | None:intergenic | 45.0% | |
| CTTTGCTGAGAATAGCTGAC+AGG | - | chr7_3:40784318-40784337 | Msa1104120:intron | 45.0% | |
| ! | TCCCAAAATGGTTCTGCCAA+GGG | + | chr7_3:40785033-40785052 | None:intergenic | 45.0% |
| AGACACATTACACTGCTCCT+AGG | - | chr7_3:40785105-40785124 | Msa1104120:intron | 45.0% | |
| ACATTACACTGCTCCTAGGA+TGG | - | chr7_3:40785109-40785128 | Msa1104120:intron | 45.0% | |
| AAGAACGAGCTTCAGAACCA+TGG | + | chr7_3:40785185-40785204 | None:intergenic | 45.0% | |
| CCACACAGAAAACAGACATC+AGG | + | chr7_3:40785265-40785284 | None:intergenic | 45.0% | |
| ! | CCTGATGTCTGTTTTCTGTG+TGG | - | chr7_3:40785262-40785281 | Msa1104120:intron | 45.0% |
| TTCAAGGTGATAGCTGCATC+TGG | - | chr7_3:40785293-40785312 | Msa1104120:intron | 45.0% | |
| !! | GGTGGGATTTGTTGACAACT+TGG | + | chr7_3:40785366-40785385 | None:intergenic | 45.0% |
| TTCAACCAACTGAGTTGCTG+TGG | + | chr7_3:40785387-40785406 | None:intergenic | 45.0% | |
| ATGGTCATGCAAGCAATGCT+GGG | - | chr7_3:40785620-40785639 | Msa1104120:intron | 45.0% | |
| GGTTCTTGGAATAAGACAGC+AGG | - | chr7_3:40785641-40785660 | Msa1104120:intron | 45.0% | |
| TCTTGGAATAAGACAGCAGG+AGG | - | chr7_3:40785644-40785663 | Msa1104120:intron | 45.0% | |
| CTTGGAATAAGACAGCAGGA+GGG | - | chr7_3:40785645-40785664 | Msa1104120:intron | 45.0% | |
| TTGGAATAAGACAGCAGGAG+GGG | - | chr7_3:40785646-40785665 | Msa1104120:intron | 45.0% | |
| AAGACCCGTGTCCTTGTAAT+TGG | + | chr7_3:40785841-40785860 | None:intergenic | 45.0% | |
| ! | TACAAGGACACGGGTCTTTT+TGG | - | chr7_3:40785843-40785862 | Msa1104120:intron | 45.0% |
| TGGTGTTTATGCTGTCGCTA+AGG | - | chr7_3:40785863-40785882 | Msa1104120:intron | 45.0% | |
| GACATTCCATGTCTTCCTCT+TGG | + | chr7_3:40785974-40785993 | None:intergenic | 45.0% | |
| ! | GACAACCAAGTTGGCTTATC+AGG | - | chr7_3:40786816-40786835 | Msa1104120:intron | 45.0% |
| ! | GTTGGCTTATCAGGTTTCAG+AGG | - | chr7_3:40786825-40786844 | Msa1104120:intron | 45.0% |
| TAGTGATCACGTTTGTGACC+TGG | - | chr7_3:40787428-40787447 | Msa1104120:intron | 45.0% | |
| TCGCTTCTGCTTCACATTGA+TGG | - | chr7_3:40788031-40788050 | Msa1104120:intron | 45.0% | |
| ! | GATGTTGCTATTGCTGCCAT+GGG | - | chr7_3:40788535-40788554 | Msa1104120:CDS | 45.0% |
| TAAACGCTGAATAGGTCCCA+TGG | + | chr7_3:40788554-40788573 | None:intergenic | 45.0% | |
| CGTCTGAACCAGTTGTAATC+AGG | + | chr7_3:40788577-40788596 | None:intergenic | 45.0% | |
| GAACTAATAGCGGTTCCAGT+AGG | + | chr7_3:40788605-40788624 | None:intergenic | 45.0% | |
| ACTCCATATATGCCTCTGGA+TGG | - | chr7_3:40788686-40788705 | Msa1104120:CDS | 45.0% | |
| TCAAAAGAGACCAGAAGCCA+GGG | + | chr7_3:40788886-40788905 | None:intergenic | 45.0% | |
| !!! | TTTCTTTTAATATATAAATA+TGG | - | chr7_3:40785232-40785251 | Msa1104120:intron | 5.0% |
| !! | TGTGGCTAGGGTTTGGTTTG+GGG | + | chr7_3:40783163-40783182 | None:intergenic | 50.0% |
| ! | GTGTGGCTAGGGTTTGGTTT+GGG | + | chr7_3:40783164-40783183 | None:intergenic | 50.0% |
| ! | TGTGTGGCTAGGGTTTGGTT+TGG | + | chr7_3:40783165-40783184 | None:intergenic | 50.0% |
| AACCAAACCCTAGCCACACA+CGG | - | chr7_3:40783165-40783184 | Msa1104120:three_prime_UTR | 50.0% | |
| ! | GTTGATCGTCATGGTGGAGA+GGG | + | chr7_3:40783195-40783214 | None:intergenic | 50.0% |
| ! | TGTTGATCGTCATGGTGGAG+AGG | + | chr7_3:40783196-40783215 | None:intergenic | 50.0% |
| GGATCGGATTGATGTGAGGA+TGG | + | chr7_3:40783258-40783277 | None:intergenic | 50.0% | |
| TAGATCATGACGTTCGGAGG+TGG | + | chr7_3:40783347-40783366 | None:intergenic | 50.0% | |
| TCGTAGATCATGACGTTCGG+AGG | + | chr7_3:40783350-40783369 | None:intergenic | 50.0% | |
| !! | TGGTCACGGATTTCGGGTTT+AGG | + | chr7_3:40783449-40783468 | None:intergenic | 50.0% |
| TCGTGTGTGGTCACGGATTT+CGG | + | chr7_3:40783456-40783475 | None:intergenic | 50.0% | |
| AGAGGATTCGTGTGTGGTCA+CGG | + | chr7_3:40783463-40783482 | None:intergenic | 50.0% | |
| TGTGATGCGAGTTTCAGGAG+CGG | + | chr7_3:40783486-40783505 | None:intergenic | 50.0% | |
| CGCATCACAACTCTCCCTAA+CGG | - | chr7_3:40783497-40783516 | Msa1104120:intron | 50.0% | |
| !! | TGCCGGTTCGAGATTTGAGA+CGG | - | chr7_3:40783583-40783602 | Msa1104120:CDS | 50.0% |
| CTCCGTCTCAAATCTCGAAC+CGG | + | chr7_3:40783588-40783607 | None:intergenic | 50.0% | |
| TATTTAAGGGGACGGAGAGG+AGG | - | chr7_3:40783645-40783664 | Msa1104120:CDS | 50.0% | |
| GAATGCGAGGGATTTGGAAG+AGG | - | chr7_3:40783667-40783686 | Msa1104120:intron | 50.0% | |
| TGAGAGCAACTCTACTGACC+CGG | + | chr7_3:40784493-40784512 | None:intergenic | 50.0% | |
| GTCAGTAGAGTTGCTCTCAC+AGG | - | chr7_3:40784494-40784513 | Msa1104120:intron | 50.0% | |
| GTAGAGTTGCTCTCACAGGT+CGG | - | chr7_3:40784498-40784517 | Msa1104120:intron | 50.0% | |
| TCGGTGGGTCAGTTGTTACT+GGG | + | chr7_3:40784629-40784648 | None:intergenic | 50.0% | |
| ATCGGTGGGTCAGTTGTTAC+TGG | + | chr7_3:40784630-40784649 | None:intergenic | 50.0% | |
| ! | AAGGGGAGTGTACTGGAAAG+CGG | + | chr7_3:40785015-40785034 | None:intergenic | 50.0% |
| ! | TCCCCTTGGCAGAACCATTT+TGG | - | chr7_3:40785028-40785047 | Msa1104120:intron | 50.0% |
| ! | CCCAAAATGGTTCTGCCAAG+GGG | + | chr7_3:40785032-40785051 | None:intergenic | 50.0% |
| ! | CCCCTTGGCAGAACCATTTT+GGG | - | chr7_3:40785029-40785048 | Msa1104120:intron | 50.0% |
| ! | GTCCCAAAATGGTTCTGCCA+AGG | + | chr7_3:40785034-40785053 | None:intergenic | 50.0% |
| ! | GTTCTGAGCAGGTCCCAAAA+TGG | + | chr7_3:40785045-40785064 | None:intergenic | 50.0% |
| !! | CTGTGTGGGTCTGCTTTTCA+AGG | - | chr7_3:40785277-40785296 | Msa1104120:intron | 50.0% |
| ACCAACTGAGTTGCTGTGGT+GGG | + | chr7_3:40785383-40785402 | None:intergenic | 50.0% | |
| AACCAACTGAGTTGCTGTGG+TGG | + | chr7_3:40785384-40785403 | None:intergenic | 50.0% | |
| GCTACCGCAAATTGTGCAAG+AGG | + | chr7_3:40785557-40785576 | None:intergenic | 50.0% | |
| GATGGTCATGCAAGCAATGC+TGG | - | chr7_3:40785619-40785638 | Msa1104120:intron | 50.0% | |
| TGCAAGCAATGCTGGGTTCT+TGG | - | chr7_3:40785627-40785646 | Msa1104120:intron | 50.0% | |
| TGGAATAAGACAGCAGGAGG+GGG | - | chr7_3:40785647-40785666 | Msa1104120:intron | 50.0% | |
| AGCAGGAGGGGGAAAACATA+TGG | - | chr7_3:40785658-40785677 | Msa1104120:intron | 50.0% | |
| GCAGGAGGGGGAAAACATAT+GGG | - | chr7_3:40785659-40785678 | Msa1104120:intron | 50.0% | |
| CAGGAGGGGGAAAACATATG+GGG | - | chr7_3:40785660-40785679 | Msa1104120:intron | 50.0% | |
| GCAAACCCAAGAGGAAGACA+TGG | - | chr7_3:40785965-40785984 | Msa1104120:intron | 50.0% | |
| GACAGATCATCCAAGCAGTC+CGG | + | chr7_3:40786778-40786797 | None:intergenic | 50.0% | |
| ! | GGATGTTGCTATTGCTGCCA+TGG | - | chr7_3:40788534-40788553 | Msa1104120:CDS | 50.0% |
| ! | AGGCCATCCAGAGGCATATA+TGG | + | chr7_3:40788692-40788711 | None:intergenic | 50.0% |
| CTCAAAAGAGACCAGAAGCC+AGG | + | chr7_3:40788887-40788906 | None:intergenic | 50.0% | |
| ! | CTGGCTTCTGGTCTCTTTTG+AGG | - | chr7_3:40788885-40788904 | Msa1104120:five_prime_UTR | 50.0% |
| !! | GTGGCTAGGGTTTGGTTTGG+GGG | + | chr7_3:40783162-40783181 | None:intergenic | 55.0% |
| ACCAAACCCTAGCCACACAC+GGG | - | chr7_3:40783166-40783185 | Msa1104120:three_prime_UTR | 55.0% | |
| ! | TGGCGGATCGGATTGATGTG+AGG | + | chr7_3:40783262-40783281 | None:intergenic | 55.0% |
| TCATGACGTTCGGAGGTGGT+GGG | + | chr7_3:40783343-40783362 | None:intergenic | 55.0% | |
| ATCATGACGTTCGGAGGTGG+TGG | + | chr7_3:40783344-40783363 | None:intergenic | 55.0% | |
| CGTGTGTGGTCACGGATTTC+GGG | + | chr7_3:40783455-40783474 | None:intergenic | 55.0% | |
| TGAGCTAAGGCTAGACTCCG+TGG | + | chr7_3:40783534-40783553 | None:intergenic | 55.0% | |
| !! | CGGAGTCTAGCCTTAGCTCA+AGG | - | chr7_3:40783534-40783553 | Msa1104120:intron | 55.0% |
| CGGTAGCAGTCCTTGAGCTA+AGG | + | chr7_3:40783547-40783566 | None:intergenic | 55.0% | |
| AGCTCAAGGACTGCTACCGT+TGG | - | chr7_3:40783548-40783567 | Msa1104120:intron | 55.0% | |
| GCTCAAGGACTGCTACCGTT+GGG | - | chr7_3:40783549-40783568 | Msa1104120:intron | 55.0% | |
| CTCAAGGACTGCTACCGTTG+GGG | - | chr7_3:40783550-40783569 | Msa1104120:intron | 55.0% | |
| !! | GGCATCGATCCAAACCCCAA+CGG | + | chr7_3:40783567-40783586 | None:intergenic | 55.0% |
| GTTGGGGTTTGGATCGATGC+CGG | - | chr7_3:40783566-40783585 | Msa1104120:intron | 55.0% | |
| ! | CGGTTCGAGATTTGAGACGG+AGG | - | chr7_3:40783586-40783605 | Msa1104120:CDS | 55.0% |
| GAGGAGGAATGCGAGGGATT+TGG | - | chr7_3:40783661-40783680 | Msa1104120:intron | 55.0% | |
| GGTGGGTCAGTTGTTACTGG+GGG | + | chr7_3:40784627-40784646 | None:intergenic | 55.0% | |
| CGGTGGGTCAGTTGTTACTG+GGG | + | chr7_3:40784628-40784647 | None:intergenic | 55.0% | |
| ! | GTAGGTTGAGGGCCAAACAG+AGG | - | chr7_3:40784962-40784981 | Msa1104120:intron | 55.0% |
| ACTGGAAAGCGGTTGCGTGT+AGG | + | chr7_3:40785004-40785023 | None:intergenic | 55.0% | |
| GCTTTCCAGTACACTCCCCT+TGG | - | chr7_3:40785014-40785033 | Msa1104120:intron | 55.0% | |
| ! | TTCTGCCAAGGGGAGTGTAC+TGG | + | chr7_3:40785022-40785041 | None:intergenic | 55.0% |
| TCCCACCACAGCAACTCAGT+TGG | - | chr7_3:40785379-40785398 | Msa1104120:intron | 55.0% | |
| TCTGAGCTAGCACAGCGAGT+TGG | - | chr7_3:40785777-40785796 | Msa1104120:intron | 55.0% | |
| AGCTCGCATGCAAACCCAAG+AGG | - | chr7_3:40785956-40785975 | Msa1104120:intron | 55.0% | |
| TGTTACGCGTGCTCGCAATC+AGG | - | chr7_3:40786852-40786871 | Msa1104120:intron | 55.0% | |
| GATCACGTTTGTGACCTGGC+TGG | - | chr7_3:40787432-40787451 | Msa1104120:intron | 55.0% | |
| GGTTCAGACGCAGAACCTAC+TGG | - | chr7_3:40788587-40788606 | Msa1104120:CDS | 55.0% | |
| TGCCTCTGGATGGCCTGTTT+AGG | - | chr7_3:40788696-40788715 | Msa1104120:CDS | 55.0% | |
| AAGAGACCAGAAGCCAGGGT+GGG | + | chr7_3:40788882-40788901 | None:intergenic | 55.0% | |
| AAAGAGACCAGAAGCCAGGG+TGG | + | chr7_3:40788883-40788902 | None:intergenic | 55.0% | |
| !! | ATGAACGGCGGACTAGGGTG+AGG | + | chr7_3:40783223-40783242 | None:intergenic | 60.0% |
| ATGTGAGGATGGGTGTCCGC+CGG | + | chr7_3:40783247-40783266 | None:intergenic | 60.0% | |
| !! | AGGTGGAGAGAGTGGCGGAT+CGG | + | chr7_3:40783274-40783293 | None:intergenic | 60.0% |
| CATGACGTTCGGAGGTGGTG+GGG | + | chr7_3:40783342-40783361 | None:intergenic | 60.0% | |
| GAGCGGAGAGGATTCGTGTG+TGG | + | chr7_3:40783469-40783488 | None:intergenic | 60.0% | |
| TGCGAGTTTCAGGAGCGGAG+AGG | + | chr7_3:40783481-40783500 | None:intergenic | 60.0% | |
| TGGCGACACGGAGTCCGTTA+GGG | + | chr7_3:40783514-40783533 | None:intergenic | 60.0% | |
| !! | TAACGGACTCCGTGTCGCCA+CGG | - | chr7_3:40783514-40783533 | Msa1104120:intron | 60.0% |
| GGACTGCTACCGTTGGGGTT+TGG | - | chr7_3:40783555-40783574 | Msa1104120:intron | 60.0% | |
| GACGGAGAGGAGGAATGCGA+GGG | - | chr7_3:40783655-40783674 | Msa1104120:CDS | 60.0% | |
| AGGGGATGTGCCTGTTGCGT+TGG | - | chr7_3:40783766-40783785 | Msa1104120:intron | 60.0% | |
| GGGTCAGTTGTTACTGGGGG+TGG | + | chr7_3:40784624-40784643 | None:intergenic | 60.0% | |
| GGAAAGCGGTTGCGTGTAGG+TGG | + | chr7_3:40785001-40785020 | None:intergenic | 60.0% | |
| ACGCGTGCTCGCAATCAGGT+AGG | - | chr7_3:40786856-40786875 | Msa1104120:intron | 60.0% | |
| GGCCTAAACAGGCCATCCAG+AGG | + | chr7_3:40788701-40788720 | None:intergenic | 60.0% | |
| AGAGACCAGAAGCCAGGGTG+GGG | + | chr7_3:40788881-40788900 | None:intergenic | 60.0% | |
| GCCCGTGTGTGGCTAGGGTT+TGG | + | chr7_3:40783170-40783189 | None:intergenic | 65.0% | |
| !! | CCGGGATGAACGGCGGACTA+GGG | + | chr7_3:40783228-40783247 | None:intergenic | 65.0% |
| CCCTAGTCCGCCGTTCATCC+CGG | - | chr7_3:40783225-40783244 | Msa1104120:three_prime_UTR | 65.0% | |
| TAGTCCGCCGTTCATCCCGG+CGG | - | chr7_3:40783228-40783247 | Msa1104120:three_prime_UTR | 65.0% | |
| TGGGTGTCCGCCGGGATGAA+CGG | + | chr7_3:40783238-40783257 | None:intergenic | 65.0% | |
| TGTGAGGATGGGTGTCCGCC+GGG | + | chr7_3:40783246-40783265 | None:intergenic | 65.0% | |
| AGCGGAGGTGGAGAGAGTGG+CGG | + | chr7_3:40783279-40783298 | None:intergenic | 65.0% | |
| TGAAGGGGGTGAGCGGGTGA+CGG | + | chr7_3:40783309-40783328 | None:intergenic | 65.0% | |
| TGGGGAAGGGGGTGGTGAAG+GGG | + | chr7_3:40783324-40783343 | None:intergenic | 65.0% | |
| GTGGGGAAGGGGGTGGTGAA+GGG | + | chr7_3:40783325-40783344 | None:intergenic | 65.0% | |
| !! | TTCGGAGGTGGTGGGGAAGG+GGG | + | chr7_3:40783335-40783354 | None:intergenic | 65.0% |
| !! | GTTCGGAGGTGGTGGGGAAG+GGG | + | chr7_3:40783336-40783355 | None:intergenic | 65.0% |
| !! | CGTTCGGAGGTGGTGGGGAA+GGG | + | chr7_3:40783337-40783356 | None:intergenic | 65.0% |
| !! | ACGTTCGGAGGTGGTGGGGA+AGG | + | chr7_3:40783338-40783357 | None:intergenic | 65.0% |
| GTGGCGACACGGAGTCCGTT+AGG | + | chr7_3:40783515-40783534 | None:intergenic | 65.0% | |
| GGCTAGACTCCGTGGCGACA+CGG | + | chr7_3:40783526-40783545 | None:intergenic | 65.0% | |
| GGACGGAGAGGAGGAATGCG+AGG | - | chr7_3:40783654-40783673 | Msa1104120:CDS | 65.0% | |
| GTGCTCTCAGCCGGACTGCT+TGG | - | chr7_3:40786765-40786784 | Msa1104120:intron | 65.0% | |
| GTTTCTCCCGAACCCCACCC+TGG | - | chr7_3:40788866-40788885 | Msa1104120:five_prime_UTR | 65.0% | |
| CAGAAGCCAGGGTGGGGTTC+GGG | + | chr7_3:40788875-40788894 | None:intergenic | 65.0% | |
| CCAGAAGCCAGGGTGGGGTT+CGG | + | chr7_3:40788876-40788895 | None:intergenic | 65.0% | |
| GGGCTGCCCGTGTGTGGCTA+GGG | + | chr7_3:40783175-40783194 | None:intergenic | 70.0% | |
| AGGGCTGCCCGTGTGTGGCT+AGG | + | chr7_3:40783176-40783195 | None:intergenic | 70.0% | |
| TGGAGAGGGCTGCCCGTGTG+TGG | + | chr7_3:40783181-40783200 | None:intergenic | 70.0% | |
| ! | GCCGGGATGAACGGCGGACT+AGG | + | chr7_3:40783229-40783248 | None:intergenic | 70.0% |
| GTGTCCGCCGGGATGAACGG+CGG | + | chr7_3:40783235-40783254 | None:intergenic | 70.0% | |
| GGCAGCGGAGGTGGAGAGAG+TGG | + | chr7_3:40783282-40783301 | None:intergenic | 70.0% | |
| AAGGGGGTGAGCGGGTGACG+GGG | + | chr7_3:40783307-40783326 | None:intergenic | 70.0% | |
| GAAGGGGGTGAGCGGGTGAC+GGG | + | chr7_3:40783308-40783327 | None:intergenic | 70.0% | |
| GGGTGGTGAAGGGGGTGAGC+GGG | + | chr7_3:40783315-40783334 | None:intergenic | 70.0% | |
| GGGGTGGTGAAGGGGGTGAG+CGG | + | chr7_3:40783316-40783335 | None:intergenic | 70.0% | |
| GGGGAAGGGGGTGGTGAAGG+GGG | + | chr7_3:40783323-40783342 | None:intergenic | 70.0% | |
| GGTGGGGAAGGGGGTGGTGA+AGG | + | chr7_3:40783326-40783345 | None:intergenic | 70.0% | |
| CCGAACCCCACCCTGGCTTC+TGG | - | chr7_3:40788873-40788892 | Msa1104120:five_prime_UTR | 70.0% | |
| ! | AGGGGGTGAGCGGGTGACGG+GGG | + | chr7_3:40783306-40783325 | None:intergenic | 75.0% |
| !! | GGAGGTGGTGGGGAAGGGGG+TGG | + | chr7_3:40783332-40783351 | None:intergenic | 75.0% |
| !!! | GGGTGAGCGGGTGACGGGGG+CGG | + | chr7_3:40783303-40783322 | None:intergenic | 80.0% |
| ! | GACGGGGGCGGCAGCGGAGG+TGG | + | chr7_3:40783291-40783310 | None:intergenic | 85.0% |
| !!! | GGTGACGGGGGCGGCAGCGG+AGG | + | chr7_3:40783294-40783313 | None:intergenic | 85.0% |
| !!! | GCGGGTGACGGGGGCGGCAG+CGG | + | chr7_3:40783297-40783316 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 40783070 | 40788945 | 40783070 | ID=Msa1104120;Name=Msa1104120 |
| chr7_3 | mRNA | 40783070 | 40788945 | 40783070 | ID=Msa1104120-mRNA-1;Parent=Msa1104120;Name=Msa1104120-mRNA-1;_AED=0.05;_eAED=0.05;_QI=133|1|1|1|1|1|9|324|532 |
| chr7_3 | exon | 40783070 | 40783480 | 40783070 | ID=Msa1104120-mRNA-1:exon:8310;Parent=Msa1104120-mRNA-1 |
| chr7_3 | exon | 40783568 | 40783675 | 40783568 | ID=Msa1104120-mRNA-1:exon:8309;Parent=Msa1104120-mRNA-1 |
| chr7_3 | exon | 40783928 | 40783993 | 40783928 | ID=Msa1104120-mRNA-1:exon:8308;Parent=Msa1104120-mRNA-1 |
| chr7_3 | exon | 40785142 | 40785240 | 40785142 | ID=Msa1104120-mRNA-1:exon:8307;Parent=Msa1104120-mRNA-1 |
| chr7_3 | exon | 40786131 | 40786239 | 40786131 | ID=Msa1104120-mRNA-1:exon:8306;Parent=Msa1104120-mRNA-1 |
| chr7_3 | exon | 40786334 | 40786485 | 40786334 | ID=Msa1104120-mRNA-1:exon:8305;Parent=Msa1104120-mRNA-1 |
| chr7_3 | exon | 40786579 | 40786716 | 40786579 | ID=Msa1104120-mRNA-1:exon:8304;Parent=Msa1104120-mRNA-1 |
| chr7_3 | exon | 40786885 | 40787049 | 40786885 | ID=Msa1104120-mRNA-1:exon:8303;Parent=Msa1104120-mRNA-1 |
| chr7_3 | exon | 40788138 | 40788945 | 40788138 | ID=Msa1104120-mRNA-1:exon:8302;Parent=Msa1104120-mRNA-1 |
| chr7_3 | five_prime_UTR | 40788813 | 40788945 | 40788813 | ID=Msa1104120-mRNA-1:five_prime_utr;Parent=Msa1104120-mRNA-1 |
| chr7_3 | CDS | 40788138 | 40788812 | 40788138 | ID=Msa1104120-mRNA-1:cds;Parent=Msa1104120-mRNA-1 |
| chr7_3 | CDS | 40786885 | 40787049 | 40786885 | ID=Msa1104120-mRNA-1:cds;Parent=Msa1104120-mRNA-1 |
| chr7_3 | CDS | 40786579 | 40786716 | 40786579 | ID=Msa1104120-mRNA-1:cds;Parent=Msa1104120-mRNA-1 |
| chr7_3 | CDS | 40786334 | 40786485 | 40786334 | ID=Msa1104120-mRNA-1:cds;Parent=Msa1104120-mRNA-1 |
| chr7_3 | CDS | 40786131 | 40786239 | 40786131 | ID=Msa1104120-mRNA-1:cds;Parent=Msa1104120-mRNA-1 |
| chr7_3 | CDS | 40785142 | 40785240 | 40785142 | ID=Msa1104120-mRNA-1:cds;Parent=Msa1104120-mRNA-1 |
| chr7_3 | CDS | 40783928 | 40783993 | 40783928 | ID=Msa1104120-mRNA-1:cds;Parent=Msa1104120-mRNA-1 |
| chr7_3 | CDS | 40783568 | 40783675 | 40783568 | ID=Msa1104120-mRNA-1:cds;Parent=Msa1104120-mRNA-1 |
| chr7_3 | CDS | 40783394 | 40783480 | 40783394 | ID=Msa1104120-mRNA-1:cds;Parent=Msa1104120-mRNA-1 |
| chr7_3 | three_prime_UTR | 40783070 | 40783393 | 40783070 | ID=Msa1104120-mRNA-1:three_prime_utr;Parent=Msa1104120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
