AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1134020


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1134020 MtrunA17_Chr7g0214101 99.723 361 1 0 1 361 1 361 0.0 737
Msa1134020 MtrunA17_Chr8g0376411 39.665 358 205 2 2 352 51 404 1.51e-88 272
Msa1134020 MtrunA17_Chr3g0116801 41.104 326 188 1 27 352 82 403 2.74e-88 271
Msa1134020 MtrunA17_Chr4g0009631 34.925 335 202 6 23 348 33 360 6.29e-64 207
Msa1134020 MtrunA17_Chr7g0216531 75.000 100 16 2 158 248 12 111 3.46e-41 140
Msa1134020 MtrunA17_Chr7g0216531 57.143 56 24 0 84 139 2 57 2.87e-12 62.8
Msa1134020 MtrunA17_Chr7g0216541 95.122 41 2 0 160 200 6 46 1.46e-21 86.7
Msa1134020 MtrunA17_Chr3g0138171 27.468 233 142 8 66 290 421 634 3.01e-11 64.7
Msa1134020 MtrunA17_Chr8g0367181 26.587 252 167 8 69 317 427 663 3.94e-11 64.3
Msa1134020 MtrunA17_Chr8g0367201 26.587 252 167 8 69 317 427 663 4.00e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1134020 AT5G50850.1 86.188 362 42 2 1 354 1 362 0.0 639
Msa1134020 AT1G30120.1 40.456 351 202 2 5 352 60 406 2.23e-90 277
Msa1134020 AT2G34590.1 42.042 333 185 2 22 352 80 406 2.05e-89 275
Msa1134020 AT1G55510.1 36.337 344 210 5 8 348 10 347 6.63e-70 223
Msa1134020 AT3G13450.1 35.224 335 210 4 15 348 25 353 1.64e-68 219
Msa1134020 AT4G15560.1 24.727 275 187 7 19 290 390 647 3.40e-12 68.2
Msa1134020 AT3G21500.3 26.549 226 151 6 68 290 392 605 3.19e-11 65.1
Msa1134020 AT3G21500.1 26.549 226 151 6 68 290 391 604 3.68e-11 65.1
Msa1134020 AT3G21500.2 26.549 226 151 6 68 290 392 605 4.14e-11 64.7

Find 129 sgRNAs with CRISPR-Local

Find 535 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACAAAGGTTATTAATTTA+AGG 0.162693 7_4:+389463 Msa1134020:intron
TTTATAATTCCCAGCATATC+TGG 0.227146 7_4:+390083 Msa1134020:three_prime_UTR
TCATGTCTTGGTTAGTTCTT+TGG 0.228149 7_4:+389896 Msa1134020:three_prime_UTR
AATATGCAGGCTGGGTTTAC+TGG 0.232671 7_4:+386589 Msa1134020:intron
ATGCCCTGGGTTGAAAGTTT+TGG 0.247026 7_4:+388613 Msa1134020:CDS
AGAACTAGATCGATTAATTT+AGG 0.262380 7_4:-389865 None:intergenic
GTTTACTTAAAGCTGCTATA+AGG 0.289090 7_4:+388663 Msa1134020:CDS
TCTTGGTATGGCTCATGCCC+TGG 0.309803 7_4:+388599 Msa1134020:CDS
TCACCCATCAAGAAGACTTT+AGG 0.312229 7_4:-383068 None:intergenic
AAATGTGTAGGATAATAATT+TGG 0.314166 7_4:-382281 None:intergenic
TTAGATTTCCAAGGGACTAT+TGG 0.314457 7_4:+384946 Msa1134020:intron
AAGTTGGCCTTTGCAGTTTC+CGG 0.316568 7_4:-390248 None:intergenic
GGAGTTGGTGCTGCTTACTA+TGG 0.330288 7_4:+386616 Msa1134020:CDS
CATGCCTTATGCAGCAAATC+TGG 0.332687 7_4:+389668 Msa1134020:CDS
TCAAGAACTTCGGCAGAAAC+AGG 0.334442 7_4:-388851 None:intergenic
CAGAAAAGAATAATGAATTC+TGG 0.338933 7_4:+382362 Msa1134020:five_prime_UTR
GAAGACTGAAAATTAAATTC+TGG 0.349384 7_4:+390334 Msa1134020:three_prime_UTR
AATGGTTGGCTTTGCTCTAA+AGG 0.349744 7_4:+389058 Msa1134020:CDS
TCATTGATTCTGTCAGGCTT+TGG 0.355325 7_4:+389989 Msa1134020:three_prime_UTR
TCAAGGAAAACTACAGGATC+AGG 0.356678 7_4:-388689 None:intergenic
CTTTCCAGATTTGCTGCATA+AGG 0.357769 7_4:-389672 None:intergenic
CAGGCTGGGTTTACTGGGAT+TGG 0.358479 7_4:+386595 Msa1134020:intron
TAATTTGTTTGCATTGCGTT+TGG 0.365019 7_4:+390357 Msa1134020:three_prime_UTR
TCCGATGGGAAGGCAGAAAC+TGG 0.372273 7_4:-388876 None:intergenic
TCTCTCTTCTTCCGCTAAAC+AGG 0.373627 7_4:+382909 Msa1134020:CDS
AATGTACCTATTGTATTTAG+AGG 0.374366 7_4:+388375 Msa1134020:CDS
GCACCGGTGGAGAGAATTGC+CGG 0.381050 7_4:+389633 Msa1134020:CDS
GGGTTTACTGGGATTGGAGT+TGG 0.388394 7_4:+386601 Msa1134020:CDS
AAGGAATCAATCAAGATGTT+AGG 0.392916 7_4:+382745 Msa1134020:exon
CGAGCATCTTCAGATGAATA+TGG 0.394225 7_4:-388638 None:intergenic
TAAGATCAAATCGACGTGAT+AGG 0.407286 7_4:-390479 None:intergenic
TGCAGCAAATCTGGAAAGAT+TGG 0.409248 7_4:+389677 Msa1134020:CDS
TTATGCAGTGTTATGCATCT+TGG 0.410920 7_4:+388582 Msa1134020:intron
AATGGTGCTGCTGCTGGTGT+TGG 0.415359 7_4:+388402 Msa1134020:CDS
TCAGAGTTGGTGAGTATCAA+TGG 0.422592 7_4:-382461 None:intergenic
AATTTGTTTGCATTGCGTTT+GGG 0.423865 7_4:+390358 Msa1134020:three_prime_UTR
TCTGTCATCGAGGAGAGTTT+TGG 0.424908 7_4:+389600 Msa1134020:CDS
TTTCCTGACAGAAGCATTGA+TGG 0.431540 7_4:-389511 None:intergenic
AAATCAAATTACATGTCTGC+TGG 0.434500 7_4:+388345 Msa1134020:CDS
TTTACTTAAAGCTGCTATAA+GGG 0.435542 7_4:+388664 Msa1134020:CDS
GAACATCCTCCCAGATATGC+TGG 0.451781 7_4:-390093 None:intergenic
TTGGGTCCTCTAAATACAAT+AGG 0.453035 7_4:-388381 None:intergenic
CGATCCTAAAGTCTTCTTGA+TGG 0.454138 7_4:+383064 Msa1134020:CDS
TCTCAGAAGCAGGCTTATAC+CGG 0.458262 7_4:-390403 None:intergenic
GGACCCAATGGTGCTGCTGC+TGG 0.458395 7_4:+388396 Msa1134020:CDS
TTCAACTGTCACCAGTCTGT+TGG 0.461416 7_4:-389535 None:intergenic
CTTGGTATGGCTCATGCCCT+GGG 0.468165 7_4:+388600 Msa1134020:CDS
TTGAATTGTGGCTGTTATCC+CGG 0.472385 7_4:+390384 Msa1134020:three_prime_UTR
AGGTTGTGGTGGAAATTTGA+GGG 0.475922 7_4:-389946 None:intergenic
AATGTCATAAACTCCACAAC+AGG 0.479865 7_4:-386646 None:intergenic
GAAAGTGTGAAAAGGCAGAT+TGG 0.484065 7_4:+390502 Msa1134020:three_prime_UTR
AAGGGACTATTGGAGAAGTA+TGG 0.485928 7_4:+384956 Msa1134020:CDS
ATATGCAGGCTGGGTTTACT+GGG 0.487916 7_4:+386590 Msa1134020:intron
CAGATTTGCTGCATAAGGCA+TGG 0.501282 7_4:-389667 None:intergenic
GAGATGTCTGAATGCGGAAA+AGG 0.501518 7_4:-382890 None:intergenic
GACATTTAACTTCTCCATGC+AGG 0.502562 7_4:+386663 Msa1134020:CDS
CAGTGTTATGCATCTTGGTA+TGG 0.510583 7_4:+388587 Msa1134020:intron
ACACCAGCAGCAGCACCATT+GGG 0.513248 7_4:-388399 None:intergenic
GCCCCGGCAATTCTCTCCAC+CGG 0.513647 7_4:-389636 None:intergenic
CCACCATCAATGCTTCTGTC+AGG 0.514146 7_4:+389508 Msa1134020:CDS
ATGCCACAGATCTGTGCCTA+TGG 0.514735 7_4:+389833 Msa1134020:CDS
CTTAACAGATTGAGAGAGAA+GGG 0.517313 7_4:+389006 Msa1134020:intron
TGATCTTAGAAAGTGTGAAA+AGG 0.521086 7_4:+390494 Msa1134020:three_prime_UTR
ATTTAGGCAGTTGCAGCCAT+AGG 0.522619 7_4:-389849 None:intergenic
TTATAATTCCCAGCATATCT+GGG 0.527240 7_4:+390084 Msa1134020:three_prime_UTR
AACACCAGCAGCAGCACCAT+TGG 0.529263 7_4:-388400 None:intergenic
TCCTTCAATTTAGATTTCCA+AGG 0.535088 7_4:+384937 Msa1134020:intron
GGAGTGTCGAGAACCCTCTC+AGG 0.535813 7_4:-384980 None:intergenic
CAAGATATATTTAACTGTGT+GGG 0.539303 7_4:+390299 Msa1134020:three_prime_UTR
AGATTTGCTGCATAAGGCAT+GGG 0.544500 7_4:-389666 None:intergenic
ATACTTCTCCAATAGTCCCT+TGG 0.545557 7_4:-384954 None:intergenic
TCCAGTTTCTGCCTTCCCAT+CGG 0.546005 7_4:+388875 Msa1134020:CDS
GGGTTTCCTCAGCATGGTGT+TGG 0.548315 7_4:+389561 Msa1134020:CDS
TTATAGGTTGGAGAATATCA+AGG 0.548317 7_4:+384811 Msa1134020:intron
AGAATATCAAGGTGCATACA+AGG 0.548665 7_4:+384822 Msa1134020:CDS
GGAAAGATTGGCTGTCCCAC+AGG 0.549518 7_4:+389689 Msa1134020:CDS
GATCCTAAAGTCTTCTTGAT+GGG 0.550617 7_4:+383065 Msa1134020:CDS
CAACAAACAAACCTGTTTAG+CGG 0.555702 7_4:-382920 None:intergenic
AGACTGGTGACAGTTGAAGA+AGG 0.558832 7_4:+389540 Msa1134020:CDS
ACAAGATATATTTAACTGTG+TGG 0.565114 7_4:+390298 Msa1134020:three_prime_UTR
GCTTAACAGATTGAGAGAGA+AGG 0.566225 7_4:+389005 Msa1134020:intron
AAAAGGATGCACTAAAGTAT+GGG 0.566640 7_4:-390428 None:intergenic
CCTTCAATTTAGATTTCCAA+GGG 0.567285 7_4:+384938 Msa1134020:intron
AATCAAATTACATGTCTGCT+GGG 0.569255 7_4:+388346 Msa1134020:CDS
GAGGTTGTGGTGGAAATTTG+AGG 0.570350 7_4:-389947 None:intergenic
AGTCTTCTTGATGGGTGAAG+AGG 0.572562 7_4:+383073 Msa1134020:CDS
CTATGGTCTAAAGCCTGTTG+TGG 0.572678 7_4:+386633 Msa1134020:CDS
GGAACGAAAAGTTTCAGAGT+TGG 0.575482 7_4:-382474 None:intergenic
AGTATGGGTATCTCAGAAGC+AGG 0.580296 7_4:-390413 None:intergenic
CTCAGAAGCAGGCTTATACC+GGG 0.584510 7_4:-390402 None:intergenic
AACATCCTCCCAGATATGCT+GGG 0.589448 7_4:-390092 None:intergenic
CAAGAACTTCGGCAGAAACA+GGG 0.590845 7_4:-388850 None:intergenic
GTAGAGGAATTCGAATACTT+AGG 0.593492 7_4:-382399 None:intergenic
GAAACTGGAATCAAGAACTT+CGG 0.593707 7_4:-388861 None:intergenic
GCGTTTGGGACTTTGAATTG+TGG 0.594726 7_4:+390372 Msa1134020:three_prime_UTR
GTTAGGTGTTATAAGAAACA+AGG 0.596856 7_4:+382762 Msa1134020:CDS
CCTGACAGAAGCATTGATGG+TGG 0.602274 7_4:-389508 None:intergenic
GTGCCAAAACTTTCAACCCA+GGG 0.603446 7_4:-388616 None:intergenic
CAAGGAAAACTACAGGATCA+GGG 0.604349 7_4:-388688 None:intergenic
GACTGGTGACAGTTGAAGAA+GGG 0.606152 7_4:+389541 Msa1134020:CDS
GAGATAAACACTAACCTGCA+TGG 0.607390 7_4:-386677 None:intergenic
TGTCAGGAAAACCAACAGAC+TGG 0.614276 7_4:+389524 Msa1134020:CDS
CAGCCATAGGCACAGATCTG+TGG 0.618473 7_4:-389836 None:intergenic
TAGCATACCGGAAACTGCAA+AGG 0.619213 7_4:+390241 Msa1134020:three_prime_UTR
AGGCATGGGAACATCAGCCC+CGG 0.619316 7_4:-389652 None:intergenic
GGAGAAGTATGGTCCTGAGA+GGG 0.619724 7_4:+384967 Msa1134020:CDS
ATTGTATTTAGAGGACCCAA+TGG 0.620504 7_4:+388384 Msa1134020:CDS
GAAGAAGGGTTTCCTCAGCA+TGG 0.620750 7_4:+389555 Msa1134020:CDS
ACTCAAAACAGCAAGCAAGT+TGG 0.621959 7_4:-390264 None:intergenic
GGTGCCAAAACTTTCAACCC+AGG 0.622618 7_4:-388617 None:intergenic
CATCAAGAAGACTTTAGGAT+CGG 0.623232 7_4:-383063 None:intergenic
CCTTCCCATCGGAAAAGCAA+AGG 0.627357 7_4:+388886 Msa1134020:CDS
GCTGAGACACTAGCAAAGGA+AGG 0.630656 7_4:+389341 Msa1134020:CDS
GGCTGCTGAGACACTAGCAA+AGG 0.630698 7_4:+389337 Msa1134020:intron
TTGATGGTGGCTCGATCAAG+CGG 0.636023 7_4:-389495 None:intergenic
TGGTGGCTCGATCAAGCGGT+CGG 0.637314 7_4:-389491 None:intergenic
CAAGAAGACTTTAGGATCGG+CGG 0.641433 7_4:-383060 None:intergenic
TGGCTATCTTGATGCACCGG+TGG 0.641507 7_4:+389620 Msa1134020:CDS
ACCGGTGGAGAGAATTGCCG+GGG 0.643645 7_4:+389635 Msa1134020:CDS
TATTCATCTGAAGATGCTCG+TGG 0.654209 7_4:+388641 Msa1134020:CDS
GATGATAACAATGACACGAG+AGG 0.656495 7_4:+390131 Msa1134020:three_prime_UTR
AAAGGAAGGAATCAGTGCTG+AGG 0.656553 7_4:+389355 Msa1134020:CDS
TGGAGAAGTATGGTCCTGAG+AGG 0.669482 7_4:+384966 Msa1134020:CDS
TGTCTGAATGCGGAAAAGGA+AGG 0.671745 7_4:-382886 None:intergenic
TCAGCGCCAACACCATGCTG+AGG 0.686283 7_4:-389567 None:intergenic
AGAAGAGAGATGTCTGAATG+CGG 0.692625 7_4:-382896 None:intergenic
TAATTCCCAGCATATCTGGG+AGG 0.718916 7_4:+390087 Msa1134020:three_prime_UTR
AATCTGTGCATCTGTCATCG+AGG 0.746298 7_4:+389590 Msa1134020:CDS
TCTCGACACTCCCATCACTG+AGG 0.757157 7_4:+384991 Msa1134020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAATATTTA+TGG - chr7_4:382814-382833 None:intergenic 0.0%
!! AAAAAAATAGCAAAAATATT+CGG + chr7_4:382317-382336 Msa1134020:five_prime_UTR 10.0%
!!! AATATTTAGAATTTTTGTTA+TGG + chr7_4:383755-383774 Msa1134020:intron 10.0%
!!! AAAAGATTTTATGAATTTTA+AGG + chr7_4:385640-385659 Msa1134020:intron 10.0%
!!! TTTAAAGAATTTAAAATTCT+TGG + chr7_4:386251-386270 Msa1134020:intron 10.0%
!!! TTTTCTTATAAAAAATGTGT+AGG - chr7_4:382296-382315 None:intergenic 15.0%
!!! TTTTTTTCAATTAAGATTAG+AGG + chr7_4:383395-383414 Msa1134020:intron 15.0%
!!! TTTTTTCAATTAAGATTAGA+GGG + chr7_4:383396-383415 Msa1134020:intron 15.0%
!!! GTTATTACAATATTTTAGTT+AGG - chr7_4:384053-384072 None:intergenic 15.0%
!! TATGTTCATTTCAATATAAT+TGG + chr7_4:384321-384340 Msa1134020:intron 15.0%
!!! TCATTTTCTAATGTTTATTT+TGG + chr7_4:384778-384797 Msa1134020:intron 15.0%
!! TATAAAAATGTAAACATGAA+AGG - chr7_4:385102-385121 None:intergenic 15.0%
!!! AATTTGTTCATTTTATTAGA+TGG - chr7_4:385210-385229 None:intergenic 15.0%
!!! TTTACATCATAAGATTTTAA+AGG + chr7_4:385594-385613 Msa1134020:intron 15.0%
!!! TAAGATTTTAAAGGATTTTA+TGG + chr7_4:385603-385622 Msa1134020:intron 15.0%
!!! TTTAATAAATTAGATTTTGC+TGG - chr7_4:386001-386020 None:intergenic 15.0%
!!! TGTTTTAAATTTTGATATTC+AGG + chr7_4:387956-387975 Msa1134020:intron 15.0%
!!! TTATATATTTGAAGTAAAGT+CGG + chr7_4:389248-389267 Msa1134020:intron 15.0%
!!! AACTTTTTTTTACTTTGTTT+AGG + chr7_4:389316-389335 Msa1134020:intron 15.0%
!!! ATTATTTTTGGTAACATAAA+GGG - chr7_4:389925-389944 None:intergenic 15.0%
!!! AATTATTTTTGGTAACATAA+AGG - chr7_4:389926-389945 None:intergenic 15.0%
!! AAATGTGTAGGATAATAATT+TGG - chr7_4:382284-382303 None:intergenic 20.0%
!!! TGTTGAGATTTTTATTTCTT+AGG + chr7_4:382675-382694 Msa1134020:intron 20.0%
!!! TTTTTCAATTAAGATTAGAG+GGG + chr7_4:383397-383416 Msa1134020:intron 20.0%
!! TAAGCTATAAGCTAAAAAAT+GGG + chr7_4:383567-383586 Msa1134020:intron 20.0%
!! AACAAAAAATCTGAAAATGT+TGG - chr7_4:383976-383995 None:intergenic 20.0%
!! TATTATATATGTCGGAATAT+AGG - chr7_4:384284-384303 None:intergenic 20.0%
!!! TTTTGGTTGTATTTGATTAT+AGG + chr7_4:384795-384814 Msa1134020:intron 20.0%
!! AAATGAACAAATTCAAACTT+TGG + chr7_4:385217-385236 Msa1134020:intron 20.0%
!!! GTATTGGATTAAGATTTTAA+AGG + chr7_4:385465-385484 Msa1134020:intron 20.0%
!!! TCAGATTTAAAAGATTTTGT+AGG + chr7_4:385510-385529 Msa1134020:intron 20.0%
!!! ATTTTCAATTTGGATTTCAA+TGG + chr7_4:385570-385589 Msa1134020:intron 20.0%
!!! TTTTTATGATAGATAAAGAG+AGG + chr7_4:385735-385754 Msa1134020:intron 20.0%
!!! TTTTATGATAGATAAAGAGA+GGG + chr7_4:385736-385755 Msa1134020:intron 20.0%
!! TTAATTATGAAAAAGTCTTG+TGG - chr7_4:386180-386199 None:intergenic 20.0%
!! ATTCCTGGTAAAAAAAAAAA+AGG + chr7_4:386511-386530 Msa1134020:intron 20.0%
!!! AATCCTTTTTTTTTTTTACC+AGG - chr7_4:386517-386536 None:intergenic 20.0%
!! ATAATGTTCATTAAATATGC+AGG + chr7_4:386576-386595 Msa1134020:intron 20.0%
!!! TGTGTTAATTTTACATCTTT+TGG + chr7_4:386736-386755 Msa1134020:intron 20.0%
!! TGTATAATCATCATAAATTC+AGG + chr7_4:387168-387187 Msa1134020:intron 20.0%
!!! CTAATTTGACACTTTTATTT+AGG - chr7_4:387256-387275 None:intergenic 20.0%
!!! AATAAAAGTGTCAAATTAGA+AGG + chr7_4:387257-387276 Msa1134020:intron 20.0%
!! GCAACAATAAAATTAAACAA+TGG + chr7_4:387439-387458 Msa1134020:intron 20.0%
!! TAAAACAAATAGAATTGACA+AGG - chr7_4:387943-387962 None:intergenic 20.0%
!!! ATTGATAAAAATCGCTTTTA+GGG - chr7_4:388078-388097 None:intergenic 20.0%
!! TAAAATTAATTGTGTGAAGT+CGG + chr7_4:388169-388188 Msa1134020:intron 20.0%
!! AGATGACATAATGATAAAAT+GGG - chr7_4:388280-388299 None:intergenic 20.0%
!! AAGATGACATAATGATAAAA+TGG - chr7_4:388281-388300 None:intergenic 20.0%
!!! AAAAGAGGACTATAATTTTT+TGG + chr7_4:389214-389233 Msa1134020:intron 20.0%
!! CTTAAATTAATAACCTTTGT+GGG - chr7_4:389465-389484 None:intergenic 20.0%
!! TTTCTTAAATATCACTTCTA+AGG + chr7_4:389717-389736 Msa1134020:intron 20.0%
!!! AAATTTGAGGGAATTATTTT+TGG - chr7_4:389937-389956 None:intergenic 20.0%
! CAGAAAAGAATAATGAATTC+TGG + chr7_4:382362-382381 Msa1134020:five_prime_UTR 25.0%
! TGAAAAAAAAAACGAGAGAT+CGG - chr7_4:382566-382585 None:intergenic 25.0%
!! ATCATTTTCAGAATCTTCTT+CGG + chr7_4:382863-382882 Msa1134020:intron 25.0%
!! ATTTTACCAAACACTACAAA+GGG - chr7_4:383311-383330 None:intergenic 25.0%
!! AATTTTACCAAACACTACAA+AGG - chr7_4:383312-383331 None:intergenic 25.0%
! GTAGTGTTTGGTAAAATTAA+CGG + chr7_4:383314-383333 Msa1134020:intron 25.0%
!!! CATTTTTTAGCTTATAGCTT+AGG - chr7_4:383568-383587 None:intergenic 25.0%
! CTAAGCTATAAGCTAAAAAA+TGG + chr7_4:383566-383585 Msa1134020:intron 25.0%
!! TGTTATGGTAATTTTGCAAA+TGG + chr7_4:383770-383789 Msa1134020:intron 25.0%
! TAATGTAACACAAAAGTCAA+AGG - chr7_4:383912-383931 None:intergenic 25.0%
!!! CAGTTAGTTTTACGAAAATA+GGG - chr7_4:384012-384031 None:intergenic 25.0%
!!! TCAGTTAGTTTTACGAAAAT+AGG - chr7_4:384013-384032 None:intergenic 25.0%
!! AGATTTTTCCTAATAGTAGT+AGG + chr7_4:384073-384092 Msa1134020:intron 25.0%
! TTCCGACATATATAATATGA+CGG + chr7_4:384287-384306 Msa1134020:intron 25.0%
!!! ATATGACCATTGACTTAATT+TGG + chr7_4:384550-384569 Msa1134020:intron 25.0%
! AATTCATGCATGTCTTTATA+CGG - chr7_4:384753-384772 None:intergenic 25.0%
! AAAATGTAAACATGAAAGGA+AGG - chr7_4:385098-385117 None:intergenic 25.0%
! CGAAAAATGTAACAAAAAGT+GGG - chr7_4:385407-385426 None:intergenic 25.0%
!!! CCACTTTTTGTTACATTTTT+CGG + chr7_4:385405-385424 Msa1134020:intron 25.0%
!! GTTAGTTTATTTCCATCTTA+GGG + chr7_4:385439-385458 Msa1134020:intron 25.0%
! TTAGTTTATTTCCATCTTAG+GGG + chr7_4:385440-385459 Msa1134020:intron 25.0%
!!! CATGATTTTAAAAGACTATC+AGG + chr7_4:385547-385566 Msa1134020:intron 25.0%
! TTTATGATAGATAAAGAGAG+GGG + chr7_4:385737-385756 Msa1134020:intron 25.0%
! ATGAAGACATAAGATTTCTT+GGG - chr7_4:385932-385951 None:intergenic 25.0%
! ATCACTTAAAAAAAGTCTCA+TGG - chr7_4:386055-386074 None:intergenic 25.0%
! GCAATTTAAAAAAAGTCTTG+TGG - chr7_4:386138-386157 None:intergenic 25.0%
! AGAAATTCACTAATAATTCC+TGG + chr7_4:386496-386515 Msa1134020:intron 25.0%
!!! AAAGTTTTTTCGTGAAAAGT+TGG + chr7_4:386823-386842 Msa1134020:intron 25.0%
! TAAGCAAACTAATCATCATT+TGG - chr7_4:386929-386948 None:intergenic 25.0%
!!! AAATGATGATTAGTTTGCTT+AGG + chr7_4:386928-386947 Msa1134020:intron 25.0%
! TTCTCGATATAAAATATTCG+AGG - chr7_4:387013-387032 None:intergenic 25.0%
!! AATCTGTAGTTTGTATCTTT+AGG - chr7_4:387680-387699 None:intergenic 25.0%
! ATCATCACCAATTAATTATG+TGG + chr7_4:387778-387797 Msa1134020:intron 25.0%
! CTAAACACCACATAATTAAT+TGG - chr7_4:387788-387807 None:intergenic 25.0%
! ATAAATCATCACCAATTATG+TGG + chr7_4:387833-387852 Msa1134020:intron 25.0%
! TAGGGTGTGATTATTAATAT+GGG - chr7_4:388060-388079 None:intergenic 25.0%
! TTAGGGTGTGATTATTAATA+TGG - chr7_4:388061-388080 None:intergenic 25.0%
!!! CATTGATAAAAATCGCTTTT+AGG - chr7_4:388079-388098 None:intergenic 25.0%
! AAAATTAATTGTGTGAAGTC+GGG + chr7_4:388170-388189 Msa1134020:intron 25.0%
! AAAATGGGATGAAATAGATA+GGG - chr7_4:388265-388284 None:intergenic 25.0%
! TAAAATGGGATGAAATAGAT+AGG - chr7_4:388266-388285 None:intergenic 25.0%
! AATGTACCTATTGTATTTAG+AGG + chr7_4:388375-388394 Msa1134020:CDS 25.0%
! TTTACTTAAAGCTGCTATAA+GGG + chr7_4:388664-388683 Msa1134020:CDS 25.0%
! TAAAAAATACAAGAAAGGAC+TGG - chr7_4:388939-388958 None:intergenic 25.0%
! GACACTAAAAAATACAAGAA+AGG - chr7_4:388944-388963 None:intergenic 25.0%
! TAGAATACAAAACGATCTTA+GGG - chr7_4:389092-389111 None:intergenic 25.0%
! AAACAATAACAGAAGAAAAG+AGG + chr7_4:389199-389218 Msa1134020:intron 25.0%
!!! ATGTTTTTTTTTACCCACAA+AGG + chr7_4:389449-389468 Msa1134020:intron 25.0%
! CCTTAAATTAATAACCTTTG+TGG - chr7_4:389466-389485 None:intergenic 25.0%
! CCACAAAGGTTATTAATTTA+AGG + chr7_4:389463-389482 Msa1134020:intron 25.0%
! ATTTAAGAAACATTACCTGT+GGG - chr7_4:389707-389726 None:intergenic 25.0%
! TATTTAAGAAACATTACCTG+TGG - chr7_4:389708-389727 None:intergenic 25.0%
! AGAACTAGATCGATTAATTT+AGG - chr7_4:389868-389887 None:intergenic 25.0%
!!! TTCTGAAATTTTTCATGTCT+TGG + chr7_4:389884-389903 Msa1134020:three_prime_UTR 25.0%
! ACAAGATATATTTAACTGTG+TGG + chr7_4:390298-390317 Msa1134020:three_prime_UTR 25.0%
! CAAGATATATTTAACTGTGT+GGG + chr7_4:390299-390318 Msa1134020:three_prime_UTR 25.0%
! GAAGACTGAAAATTAAATTC+TGG + chr7_4:390334-390353 Msa1134020:three_prime_UTR 25.0%
! AACGTAATTGTGTCTAAAAA+AGG - chr7_4:390448-390467 None:intergenic 25.0%
!!! TTTTTTAGACACAATTACGT+TGG + chr7_4:390447-390466 Msa1134020:three_prime_UTR 25.0%
AAGAGAAAATGAATCGAGAA+AGG - chr7_4:382517-382536 None:intergenic 30.0%
GATCGGAAAATGAAAAAACA+CGG - chr7_4:382549-382568 None:intergenic 30.0%
CACAAAAACACAGTGAAATT+AGG - chr7_4:382591-382610 None:intergenic 30.0%
TGTAGCAAAAAAAACCTAAG+TGG - chr7_4:382638-382657 None:intergenic 30.0%
! AATCTATTTTGCAGCAATCA+AGG + chr7_4:382726-382745 Msa1134020:intron 30.0%
AAGGAATCAATCAAGATGTT+AGG + chr7_4:382745-382764 Msa1134020:exon 30.0%
! GTTAGGTGTTATAAGAAACA+AGG + chr7_4:382762-382781 Msa1134020:CDS 30.0%
TCTGAAGATTACTTGTACTA+CGG - chr7_4:383128-383147 None:intergenic 30.0%
AAGTAATCTTCAGATTTCGT+AGG + chr7_4:383134-383153 Msa1134020:intron 30.0%
AGTAATCTTCAGATTTCGTA+GGG + chr7_4:383135-383154 Msa1134020:intron 30.0%
!! AGTTAAGCTTTTTCCGTAAA+GGG + chr7_4:383234-383253 Msa1134020:intron 30.0%
TAAGTTATATCAGCCCTTTA+CGG - chr7_4:383250-383269 None:intergenic 30.0%
!! TTTCAAGTTTCATCCTTGAT+TGG + chr7_4:383629-383648 Msa1134020:intron 30.0%
TAATACTCCCATAGATTGTA+TGG + chr7_4:383680-383699 Msa1134020:intron 30.0%
CACTAAACCATACAATCTAT+GGG - chr7_4:383690-383709 None:intergenic 30.0%
TCACTAAACCATACAATCTA+TGG - chr7_4:383691-383710 None:intergenic 30.0%
GTCTGATATTTGATGAGATA+TGG - chr7_4:383874-383893 None:intergenic 30.0%
ACTATCTACCTACTACTATT+AGG - chr7_4:384084-384103 None:intergenic 30.0%
! GGTTAATAAAGTATCCTCAA+AGG - chr7_4:384204-384223 None:intergenic 30.0%
TCCGACATATATAATATGAC+GGG + chr7_4:384288-384307 Msa1134020:intron 30.0%
AAAGGACCAAATTAAGTCAA+TGG - chr7_4:384559-384578 None:intergenic 30.0%
AGATGAATTAAGCAAACGAA+AGG - chr7_4:384577-384596 None:intergenic 30.0%
!!! ATCTTTCAGTTTTAGAGTTG+AGG + chr7_4:384593-384612 Msa1134020:intron 30.0%
ATAAGCAAAGACATTGTAAG+GGG - chr7_4:384684-384703 None:intergenic 30.0%
CATAAGCAAAGACATTGTAA+GGG - chr7_4:384685-384704 None:intergenic 30.0%
TCATAAGCAAAGACATTGTA+AGG - chr7_4:384686-384705 None:intergenic 30.0%
! GTATACACTAAACCATTTTC+AGG - chr7_4:384731-384750 None:intergenic 30.0%
GGTTGTATTTGATTATAGGT+TGG + chr7_4:384799-384818 Msa1134020:intron 30.0%
! TTATAGGTTGGAGAATATCA+AGG + chr7_4:384811-384830 Msa1134020:intron 30.0%
AAGGAAATAACTTGAACAAG+TGG - chr7_4:384862-384881 None:intergenic 30.0%
TCCTTCAATTTAGATTTCCA+AGG + chr7_4:384937-384956 Msa1134020:intron 30.0%
CCTTCAATTTAGATTTCCAA+GGG + chr7_4:384938-384957 Msa1134020:intron 30.0%
AGAAAAATAACCTCAGTGAT+GGG - chr7_4:385004-385023 None:intergenic 30.0%
AAGAAAAATAACCTCAGTGA+TGG - chr7_4:385005-385024 None:intergenic 30.0%
!! ACTTTGGTAATGTAATGTGA+TGG + chr7_4:385233-385252 Msa1134020:intron 30.0%
CCGAAAAATGTAACAAAAAG+TGG - chr7_4:385408-385427 None:intergenic 30.0%
!! GGTTAGTTTATTTCCATCTT+AGG + chr7_4:385438-385457 Msa1134020:intron 30.0%
TAGTTTATTTCCATCTTAGG+GGG + chr7_4:385441-385460 Msa1134020:intron 30.0%
! GACTATCAGGATTTTCAATT+TGG + chr7_4:385560-385579 Msa1134020:intron 30.0%
CATGAAGACATAAGATTTCT+TGG - chr7_4:385933-385952 None:intergenic 30.0%
! TAGATTTTGCTGGATTTTGT+GGG - chr7_4:385991-386010 None:intergenic 30.0%
! TTAGATTTTGCTGGATTTTG+TGG - chr7_4:385992-386011 None:intergenic 30.0%
TGTGTTTGGATGATGTAATT+TGG + chr7_4:386224-386243 Msa1134020:intron 30.0%
TTATATTGCAGCTGTTTACA+TGG + chr7_4:386536-386555 Msa1134020:intron 30.0%
TTGCACACTGAATTTAAGAA+AGG - chr7_4:386711-386730 None:intergenic 30.0%
TATTCTTATCACACAGAAGA+CGG - chr7_4:386884-386903 None:intergenic 30.0%
CTAATCATCATTTGGAAACT+CGG - chr7_4:386921-386940 None:intergenic 30.0%
AAATTAGAAGGATAGTGATG+TGG + chr7_4:387269-387288 Msa1134020:intron 30.0%
! TTAAAGCATTTCTGTATGCA+TGG + chr7_4:387611-387630 Msa1134020:intron 30.0%
! TGTAGTTTGTATCTTTAGGA+GGG - chr7_4:387676-387695 None:intergenic 30.0%
AGATACAAACTACAGATTTG+TGG + chr7_4:387682-387701 Msa1134020:intron 30.0%
!!! TGGTTAGTTTTATAGTCACA+TGG + chr7_4:387860-387879 Msa1134020:intron 30.0%
!!! GTTTGTTGGTATTTTTTTGC+CGG + chr7_4:387908-387927 Msa1134020:intron 30.0%
ATTGACAAGGAATGATATTC+CGG - chr7_4:387930-387949 None:intergenic 30.0%
TTATTAATATGGGTATGCAC+AGG - chr7_4:388050-388069 None:intergenic 30.0%
AAATCAAATTACATGTCTGC+TGG + chr7_4:388345-388364 Msa1134020:CDS 30.0%
AATCAAATTACATGTCTGCT+GGG + chr7_4:388346-388365 Msa1134020:CDS 30.0%
GTTTCATAGAAGAAAATGTC+AGG - chr7_4:388454-388473 None:intergenic 30.0%
CATAACGAAAGAAAAACAGT+GGG - chr7_4:388502-388521 None:intergenic 30.0%
TCATAACGAAAGAAAAACAG+TGG - chr7_4:388503-388522 None:intergenic 30.0%
GTTTACTTAAAGCTGCTATA+AGG + chr7_4:388663-388682 Msa1134020:CDS 30.0%
!! TCATTTTCAAGGAAAACTAC+AGG - chr7_4:388698-388717 None:intergenic 30.0%
! CTTACAGTAACTCATTTTCA+AGG - chr7_4:388709-388728 None:intergenic 30.0%
TATTACAGCCTTCTCAAAAA+TGG + chr7_4:389040-389059 Msa1134020:CDS 30.0%
CTAGAATACAAAACGATCTT+AGG - chr7_4:389093-389112 None:intergenic 30.0%
! CTAAGATCGTTTTGTATTCT+AGG + chr7_4:389091-389110 Msa1134020:intron 30.0%
TTATTGCAAATGTGTTTGCT+TGG - chr7_4:389298-389317 None:intergenic 30.0%
!!! GTAAAACCACTTTTTGTATG+AGG - chr7_4:389969-389988 None:intergenic 30.0%
!!! TTTTACTCATTGATTCTGTC+AGG + chr7_4:389983-390002 Msa1134020:three_prime_UTR 30.0%
TTTATAATTCCCAGCATATC+TGG + chr7_4:390083-390102 Msa1134020:three_prime_UTR 30.0%
TTATAATTCCCAGCATATCT+GGG + chr7_4:390084-390103 Msa1134020:three_prime_UTR 30.0%
!! TCATTTTCTTTCTAGCATAC+CGG + chr7_4:390229-390248 Msa1134020:three_prime_UTR 30.0%
!! TAATTTGTTTGCATTGCGTT+TGG + chr7_4:390357-390376 Msa1134020:three_prime_UTR 30.0%
! AATTTGTTTGCATTGCGTTT+GGG + chr7_4:390358-390377 Msa1134020:three_prime_UTR 30.0%
AAAAGGATGCACTAAAGTAT+GGG - chr7_4:390431-390450 None:intergenic 30.0%
AAAAAGGATGCACTAAAGTA+TGG - chr7_4:390432-390451 None:intergenic 30.0%
! TGATCTTAGAAAGTGTGAAA+AGG + chr7_4:390494-390513 Msa1134020:three_prime_UTR 30.0%
GTAGAGGAATTCGAATACTT+AGG - chr7_4:382402-382421 None:intergenic 35.0%
TAAGTGGCAAAAATCGTAAC+CGG - chr7_4:382622-382641 None:intergenic 35.0%
CAACAAACAAACCTGTTTAG+CGG - chr7_4:382923-382942 None:intergenic 35.0%
!! CATCAAGAAGACTTTAGGAT+CGG - chr7_4:383066-383085 None:intergenic 35.0%
GATCCTAAAGTCTTCTTGAT+GGG + chr7_4:383065-383084 Msa1134020:CDS 35.0%
GCTGATAAGTTAGCATATAG+AGG + chr7_4:383177-383196 Msa1134020:intron 35.0%
!! GAGTTAAGCTTTTTCCGTAA+AGG + chr7_4:383233-383252 Msa1134020:intron 35.0%
TTTCAGTCGAATGTGCTTAT+AGG + chr7_4:383541-383560 Msa1134020:intron 35.0%
CACTAAAATTGCAATCTGAC+AGG - chr7_4:383735-383754 None:intergenic 35.0%
TTGAAGCGTAAATCTTGTCA+TGG - chr7_4:383940-383959 None:intergenic 35.0%
! GTTTTACGAAAATAGGGACT+AGG - chr7_4:384006-384025 None:intergenic 35.0%
AAGGTCAACTAAGTACTTCA+GGG - chr7_4:384175-384194 None:intergenic 35.0%
TAAGGTCAACTAAGTACTTC+AGG - chr7_4:384176-384195 None:intergenic 35.0%
TTGACCTTAAGATTCCTTTG+AGG + chr7_4:384187-384206 Msa1134020:intron 35.0%
GTATCCTCAAAGGAATCTTA+AGG - chr7_4:384194-384213 None:intergenic 35.0%
! CATTCTCTTTTCTACGCTTT+TGG - chr7_4:384225-384244 None:intergenic 35.0%
! CAAAAGCGTAGAAAAGAGAA+TGG + chr7_4:384223-384242 Msa1134020:intron 35.0%
GCCCGTCATATTATATATGT+CGG - chr7_4:384292-384311 None:intergenic 35.0%
!! TATAATATGACGGGCAAAAC+TGG + chr7_4:384297-384316 Msa1134020:intron 35.0%
GTTTATGCATGTATGTGTGT+GGG - chr7_4:384447-384466 None:intergenic 35.0%
AGTTTATGCATGTATGTGTG+TGG - chr7_4:384448-384467 None:intergenic 35.0%
CAATGGTCATATTAACGACT+AGG - chr7_4:384542-384561 None:intergenic 35.0%
!!! TTTCAGTTTTAGAGTTGAGG+TGG + chr7_4:384596-384615 Msa1134020:intron 35.0%
AGGATATTTCCACCTGAAAA+TGG + chr7_4:384716-384735 Msa1134020:intron 35.0%
!! TACACTAAACCATTTTCAGG+TGG - chr7_4:384728-384747 None:intergenic 35.0%
AGAATATCAAGGTGCATACA+AGG + chr7_4:384822-384841 Msa1134020:CDS 35.0%
! TGTTCAAGTTATTTCCTTGC+TGG + chr7_4:384864-384883 Msa1134020:intron 35.0%
CCCTTGGAAATCTAAATTGA+AGG - chr7_4:384941-384960 None:intergenic 35.0%
TTAGATTTCCAAGGGACTAT+TGG + chr7_4:384946-384965 Msa1134020:intron 35.0%
TTAATCCTGTCATTGCTTTG+AGG + chr7_4:385126-385145 Msa1134020:intron 35.0%
ATAAACCTCAAAGCAATGAC+AGG - chr7_4:385134-385153 None:intergenic 35.0%
TTATTAGATGGATGCACAGA+TGG - chr7_4:385198-385217 None:intergenic 35.0%
! TGGTAATGTAATGTGATGGA+TGG + chr7_4:385237-385256 Msa1134020:intron 35.0%
TGTTACTAGAGTTAAGAAGC+AGG - chr7_4:385361-385380 None:intergenic 35.0%
GGAAATAAACTAACCACTCA+TGG - chr7_4:385433-385452 None:intergenic 35.0%
AAAATCCCTTAGAGTGTGTT+TGG + chr7_4:386210-386229 Msa1134020:intron 35.0%
ATCATCCAAACACACTCTAA+GGG - chr7_4:386218-386237 None:intergenic 35.0%
GAGGGAATTCAAATACTTTG+AGG - chr7_4:386284-386303 None:intergenic 35.0%
GAGGAAATGTAATGTTACGA+GGG - chr7_4:386302-386321 None:intergenic 35.0%
TGAGGAAATGTAATGTTACG+AGG - chr7_4:386303-386322 None:intergenic 35.0%
TGAATTCCATTGTTTGGATG+GGG - chr7_4:386342-386361 None:intergenic 35.0%
GTGAATTCCATTGTTTGGAT+GGG - chr7_4:386343-386362 None:intergenic 35.0%
TTGAGGTGAATTCCATTGTT+TGG - chr7_4:386348-386367 None:intergenic 35.0%
GAGGGAATTCAAATACTTTG+AGG - chr7_4:386284-386303 None:intergenic 35.0%
GAGGGAATGTAATGTTATGA+GGG - chr7_4:386383-386402 None:intergenic 35.0%
TGAGGGAATGTAATGTTATG+AGG - chr7_4:386384-386403 None:intergenic 35.0%
! TTCTAAGAGTGTGTTTGGAT+GGG - chr7_4:386416-386435 None:intergenic 35.0%
! ATTCTAAGAGTGTGTTTGGA+TGG - chr7_4:386417-386436 None:intergenic 35.0%
! TAGGATTCTAAGAGTGTGTT+TGG - chr7_4:386421-386440 None:intergenic 35.0%
! TCACTGGTTGTAACTTCTAA+GGG - chr7_4:386457-386476 None:intergenic 35.0%
TGTTCATTAAATATGCAGGC+TGG + chr7_4:386580-386599 Msa1134020:intron 35.0%
GTTCATTAAATATGCAGGCT+GGG + chr7_4:386581-386600 Msa1134020:intron 35.0%
AATGTCATAAACTCCACAAC+AGG - chr7_4:386649-386668 None:intergenic 35.0%
ACCAAACACAGAGAAATCAT+GGG - chr7_4:386765-386784 None:intergenic 35.0%
AACCAAACACAGAGAAATCA+TGG - chr7_4:386766-386785 None:intergenic 35.0%
!!! TCTGTGTTTGGTTTTCTGTT+TGG + chr7_4:386773-386792 Msa1134020:intron 35.0%
GCTTCCTTCAGATTATTAGA+TGG + chr7_4:386845-386864 Msa1134020:intron 35.0%
GATGCCATCTAATAATCTGA+AGG - chr7_4:386852-386871 None:intergenic 35.0%
AGAATGATGTCTTTCACTCT+GGG - chr7_4:387114-387133 None:intergenic 35.0%
AAGAATGATGTCTTTCACTC+TGG - chr7_4:387115-387134 None:intergenic 35.0%
AAGGATTTGAAGATTCTGAG+GGG - chr7_4:387354-387373 None:intergenic 35.0%
CAAGGATTTGAAGATTCTGA+GGG - chr7_4:387355-387374 None:intergenic 35.0%
TCAAGGATTTGAAGATTCTG+AGG - chr7_4:387356-387375 None:intergenic 35.0%
!!! CTGTTTTGACTCAGTTATCA+AGG - chr7_4:387373-387392 None:intergenic 35.0%
ATTTCTGTATGCATGGTGAA+AGG + chr7_4:387618-387637 Msa1134020:intron 35.0%
AATCAATCACGGGATTACAT+GGG - chr7_4:387652-387671 None:intergenic 35.0%
! CTGTAGTTTGTATCTTTAGG+AGG - chr7_4:387677-387696 None:intergenic 35.0%
TCTTCCAATATAGAGCTCAA+CGG - chr7_4:387719-387738 None:intergenic 35.0%
ATCACCAATTATGTGGTGTT+TGG + chr7_4:387840-387859 Msa1134020:intron 35.0%
CTAACCAAACACCACATAAT+TGG - chr7_4:387847-387866 None:intergenic 35.0%
!!! GTCAGTCAAGTTTTGTTTGT+TGG + chr7_4:387894-387913 Msa1134020:intron 35.0%
CAGGAAGAATTGCAAACATA+AGG - chr7_4:388031-388050 None:intergenic 35.0%
TAGTAAGCCAAGAAGATGAA+GGG - chr7_4:388236-388255 None:intergenic 35.0%
TTGGGTCCTCTAAATACAAT+AGG - chr7_4:388384-388403 None:intergenic 35.0%
ATTGTATTTAGAGGACCCAA+TGG + chr7_4:388384-388403 Msa1134020:CDS 35.0%
CTGAAGTATATGTGCTCAAT+GGG - chr7_4:388526-388545 None:intergenic 35.0%
ACTGAAGTATATGTGCTCAA+TGG - chr7_4:388527-388546 None:intergenic 35.0%
TGCATAAAAGCAAAGTTGTG+GGG - chr7_4:388569-388588 None:intergenic 35.0%
CTGCATAAAAGCAAAGTTGT+GGG - chr7_4:388570-388589 None:intergenic 35.0%
ACTGCATAAAAGCAAAGTTG+TGG - chr7_4:388571-388590 None:intergenic 35.0%
TTATGCAGTGTTATGCATCT+TGG + chr7_4:388582-388601 Msa1134020:intron 35.0%
TGACTTATGTGCTGTAGATA+TGG + chr7_4:388818-388837 Msa1134020:intron 35.0%
GAAACTGGAATCAAGAACTT+CGG - chr7_4:388864-388883 None:intergenic 35.0%
CTTAACAGATTGAGAGAGAA+GGG + chr7_4:389006-389025 Msa1134020:intron 35.0%
!! AAAGCCAACCATTTTTGAGA+AGG - chr7_4:389051-389070 None:intergenic 35.0%
TTACCTAGTAGTATGTGAGA+TGG + chr7_4:389144-389163 Msa1134020:intron 35.0%
TATCCATCTCACATACTACT+AGG - chr7_4:389150-389169 None:intergenic 35.0%
GTAGTATGTGAGATGGATAT+AGG + chr7_4:389151-389170 Msa1134020:intron 35.0%
! CCAAAGAGAAAGTGCATAAA+GGG - chr7_4:389413-389432 None:intergenic 35.0%
! ACCAAAGAGAAAGTGCATAA+AGG - chr7_4:389414-389433 None:intergenic 35.0%
CATTATATCTCTTTGCTTGC+TGG + chr7_4:389761-389780 Msa1134020:intron 35.0%
! TCATGTCTTGGTTAGTTCTT+TGG + chr7_4:389896-389915 Msa1134020:three_prime_UTR 35.0%
!! AAGTTTTGTATGGAACCTAG+TGG + chr7_4:390154-390173 Msa1134020:three_prime_UTR 35.0%
AAAAACAGAAGTTGACCACT+AGG - chr7_4:390172-390191 None:intergenic 35.0%
TAAGATCAAATCGACGTGAT+AGG - chr7_4:390482-390501 None:intergenic 35.0%
!! TCAGAGTTGGTGAGTATCAA+TGG - chr7_4:382464-382483 None:intergenic 40.0%
GGAACGAAAAGTTTCAGAGT+TGG - chr7_4:382477-382496 None:intergenic 40.0%
!! TCTGAAACTTTTCGTTCCAC+AGG + chr7_4:382479-382498 Msa1134020:five_prime_UTR 40.0%
ATGAATCGAGAAAGGAAGAG+TGG - chr7_4:382509-382528 None:intergenic 40.0%
!! GGTTACGATTTTTGCCACTT+AGG + chr7_4:382621-382640 Msa1134020:intron 40.0%
AGAAGAGAGATGTCTGAATG+CGG - chr7_4:382899-382918 None:intergenic 40.0%
CGATCCTAAAGTCTTCTTGA+TGG + chr7_4:383064-383083 Msa1134020:CDS 40.0%
TCACCCATCAAGAAGACTTT+AGG - chr7_4:383071-383090 None:intergenic 40.0%
TGAAGAGGTAAAGCGAGATA+TGG + chr7_4:383088-383107 Msa1134020:intron 40.0%
AAGCTACGAATATCCGCTAT+AGG - chr7_4:383212-383231 None:intergenic 40.0%
AACACTACAAAGGGTCTGTT+TGG - chr7_4:383302-383321 None:intergenic 40.0%
AACAGACCCTTTGTAGTGTT+TGG + chr7_4:383302-383321 Msa1134020:intron 40.0%
!! AAGTCCAAGTCGGTTTTGTA+GGG - chr7_4:383804-383823 None:intergenic 40.0%
!! AAAACCGACTTGGACTTGTA+AGG + chr7_4:383807-383826 Msa1134020:intron 40.0%
GGTCAGAAAATCTGTTTGAG+TGG - chr7_4:383853-383872 None:intergenic 40.0%
TATCAGACTTCTCAACAACC+AGG + chr7_4:383886-383905 Msa1134020:intron 40.0%
TAACACAAAAGTCAAAGGCC+TGG - chr7_4:383907-383926 None:intergenic 40.0%
AGTAGGTAGATAGTACGAAG+CGG + chr7_4:384090-384109 Msa1134020:intron 40.0%
CGTAGAAAAGAGAATGGAAG+AGG + chr7_4:384229-384248 Msa1134020:intron 40.0%
! AAGAATACCTCTAAGAGACC+TGG + chr7_4:384257-384276 Msa1134020:intron 40.0%
ATATGTCGGAATATAGGACC+AGG - chr7_4:384278-384297 None:intergenic 40.0%
! TGATTTGTACATTCCGAAGC+CGG + chr7_4:384487-384506 Msa1134020:intron 40.0%
CATATTAACGACTAGGCAAG+TGG - chr7_4:384535-384554 None:intergenic 40.0%
GTTCATTCATGCAATGCAAG+TGG - chr7_4:384642-384661 None:intergenic 40.0%
TTGTAAGGGGAAGATTGTGT+GGG - chr7_4:384671-384690 None:intergenic 40.0%
ATTGTAAGGGGAAGATTGTG+TGG - chr7_4:384672-384691 None:intergenic 40.0%
TTGCTTATGACATCTGCTTC+AGG + chr7_4:384696-384715 Msa1134020:intron 40.0%
TATCAAGGTGCATACAAGGT+TGG + chr7_4:384826-384845 Msa1134020:intron 40.0%
AAATAAAGCAACAGCCAGCA+AGG - chr7_4:384881-384900 None:intergenic 40.0%
ATACTTCTCCAATAGTCCCT+TGG - chr7_4:384957-384976 None:intergenic 40.0%
AAGGGACTATTGGAGAAGTA+TGG + chr7_4:384956-384975 Msa1134020:CDS 40.0%
GTTTAAACCTCGCAAATCAG+TGG - chr7_4:385062-385081 None:intergenic 40.0%
GGTTTATATACCAGTGCTTG+TGG + chr7_4:385147-385166 Msa1134020:intron 40.0%
ATATACCAGTGCTTGTGGAT+TGG + chr7_4:385152-385171 Msa1134020:intron 40.0%
!! ATGTAATGTGATGGATGGCA+TGG + chr7_4:385242-385261 Msa1134020:intron 40.0%
!! TGTAATGTGATGGATGGCAT+GGG + chr7_4:385243-385262 Msa1134020:intron 40.0%
!! ACATTTTTCGGTACCATGAG+TGG + chr7_4:385417-385436 Msa1134020:intron 40.0%
CATCATCCAAACACACTCTA+AGG - chr7_4:386219-386238 None:intergenic 40.0%
GGGAATGCAATGTAATGTTG+AGG - chr7_4:386321-386340 None:intergenic 40.0%
GAATTCCATTGTTTGGATGG+GGG - chr7_4:386341-386360 None:intergenic 40.0%
GGTGAATTCCATTGTTTGGA+TGG - chr7_4:386344-386363 None:intergenic 40.0%
! TCTAAGAGTGTGTTTGGATG+GGG - chr7_4:386415-386434 None:intergenic 40.0%
TAAGGGGGATGTATTGGATT+AGG - chr7_4:386440-386459 None:intergenic 40.0%
! AACTTCTAAGGGGGATGTAT+TGG - chr7_4:386446-386465 None:intergenic 40.0%
! ACTGGTTGTAACTTCTAAGG+GGG - chr7_4:386455-386474 None:intergenic 40.0%
! CACTGGTTGTAACTTCTAAG+GGG - chr7_4:386456-386475 None:intergenic 40.0%
! CTCACTGGTTGTAACTTCTA+AGG - chr7_4:386458-386477 None:intergenic 40.0%
TAGAAGTTACAACCAGTGAG+TGG + chr7_4:386458-386477 Msa1134020:intron 40.0%
TTCATACAAAGTCCACTCAC+TGG - chr7_4:386473-386492 None:intergenic 40.0%
! GACATTTAACTTCTCCATGC+AGG + chr7_4:386663-386682 Msa1134020:CDS 40.0%
GAGATAAACACTAACCTGCA+TGG - chr7_4:386680-386699 None:intergenic 40.0%
CCAAACACAGAGAAATCATG+GGG - chr7_4:386764-386783 None:intergenic 40.0%
! ATAGTGATGTGGCTTGTGAA+CGG + chr7_4:387280-387299 Msa1134020:intron 40.0%
AAAGCTCAAACCATAATCCG+TGG + chr7_4:387470-387489 Msa1134020:intron 40.0%
AAGCTCAAACCATAATCCGT+GGG + chr7_4:387471-387490 Msa1134020:intron 40.0%
CAATCAATCACGGGATTACA+TGG - chr7_4:387653-387672 None:intergenic 40.0%
TTTAGGAGGGCAATCAATCA+CGG - chr7_4:387663-387682 None:intergenic 40.0%
ACAAACTACAGATTTGTGGC+TGG + chr7_4:387686-387705 Msa1134020:intron 40.0%
AAACCCGTTGAGCTCTATAT+TGG + chr7_4:387712-387731 Msa1134020:intron 40.0%
CTTCCAATATAGAGCTCAAC+GGG - chr7_4:387718-387737 None:intergenic 40.0%
GAGCTCTATATTGGAAGATC+TGG + chr7_4:387721-387740 Msa1134020:intron 40.0%
!! CAAAACTTGACTGACTCGTA+TGG - chr7_4:387889-387908 None:intergenic 40.0%
CTAGTAAGCCAAGAAGATGA+AGG - chr7_4:388237-388256 None:intergenic 40.0%
CTTCATCTTCTTGGCTTACT+AGG + chr7_4:388235-388254 Msa1134020:intron 40.0%
GTCATCTTGATTTCTGTTGC+AGG + chr7_4:388293-388312 Msa1134020:intron 40.0%
CAGTGTTATGCATCTTGGTA+TGG + chr7_4:388587-388606 Msa1134020:intron 40.0%
CGAGCATCTTCAGATGAATA+TGG - chr7_4:388641-388660 None:intergenic 40.0%
TATTCATCTGAAGATGCTCG+TGG + chr7_4:388641-388660 Msa1134020:CDS 40.0%
CAAGGAAAACTACAGGATCA+GGG - chr7_4:388691-388710 None:intergenic 40.0%
TCAAGGAAAACTACAGGATC+AGG - chr7_4:388692-388711 None:intergenic 40.0%
!! AGTACCTTTGCTTTTCCGAT+GGG - chr7_4:388893-388912 None:intergenic 40.0%
!! AAGTACCTTTGCTTTTCCGA+TGG - chr7_4:388894-388913 None:intergenic 40.0%
GCTTAACAGATTGAGAGAGA+AGG + chr7_4:389005-389024 Msa1134020:intron 40.0%
ACAGCCTTCTCAAAAATGGT+TGG + chr7_4:389044-389063 Msa1134020:CDS 40.0%
!! AATGGTTGGCTTTGCTCTAA+AGG + chr7_4:389058-389077 Msa1134020:CDS 40.0%
TGCAAATGTGTTTGCTTGGT+AGG - chr7_4:389294-389313 None:intergenic 40.0%
CCCTTTATGCACTTTCTCTT+TGG + chr7_4:389410-389429 Msa1134020:intron 40.0%
!! TTTCCTGACAGAAGCATTGA+TGG - chr7_4:389514-389533 None:intergenic 40.0%
!! TTTTGGCTATCTTGATGCAC+CGG + chr7_4:389617-389636 Msa1134020:CDS 40.0%
!! AGATTTGCTGCATAAGGCAT+GGG - chr7_4:389669-389688 None:intergenic 40.0%
!! CTTTCCAGATTTGCTGCATA+AGG - chr7_4:389675-389694 None:intergenic 40.0%
TGCAGCAAATCTGGAAAGAT+TGG + chr7_4:389677-389696 Msa1134020:CDS 40.0%
! TCTTTGCTTGCTGGTATATG+TGG + chr7_4:389770-389789 Msa1134020:intron 40.0%
! AGGTTGTGGTGGAAATTTGA+GGG - chr7_4:389949-389968 None:intergenic 40.0%
! CTTTTTGTATGAGGTTGTGG+TGG - chr7_4:389960-389979 None:intergenic 40.0%
!!! CCACTTTTTGTATGAGGTTG+TGG - chr7_4:389963-389982 None:intergenic 40.0%
CCACAACCTCATACAAAAAG+TGG + chr7_4:389960-389979 Msa1134020:three_prime_UTR 40.0%
!! TCATTGATTCTGTCAGGCTT+TGG + chr7_4:389989-390008 Msa1134020:three_prime_UTR 40.0%
GATGATAACAATGACACGAG+AGG + chr7_4:390131-390150 Msa1134020:three_prime_UTR 40.0%
!! ACACGAGAGGAAGTTTTGTA+TGG + chr7_4:390144-390163 Msa1134020:three_prime_UTR 40.0%
ACTCAAAACAGCAAGCAAGT+TGG - chr7_4:390267-390286 None:intergenic 40.0%
TTGAATTGTGGCTGTTATCC+CGG + chr7_4:390384-390403 Msa1134020:three_prime_UTR 40.0%
! GAAAGTGTGAAAAGGCAGAT+TGG + chr7_4:390502-390521 Msa1134020:three_prime_UTR 40.0%
AAGGAAGAGTGGAATACCTG+TGG - chr7_4:382498-382517 None:intergenic 45.0%
!! GTGTTTTTGTGAGATCTCGC+CGG + chr7_4:382600-382619 Msa1134020:intron 45.0%
TGTCTGAATGCGGAAAAGGA+AGG - chr7_4:382889-382908 None:intergenic 45.0%
GAGATGTCTGAATGCGGAAA+AGG - chr7_4:382893-382912 None:intergenic 45.0%
TCTCTCTTCTTCCGCTAAAC+AGG + chr7_4:382909-382928 Msa1134020:CDS 45.0%
!! CAAGAAGACTTTAGGATCGG+CGG - chr7_4:383063-383082 None:intergenic 45.0%
! AGTCTTCTTGATGGGTGAAG+AGG + chr7_4:383073-383092 Msa1134020:CDS 45.0%
AGATTTCGTAGGGCTCTGTT+TGG + chr7_4:383145-383164 Msa1134020:intron 45.0%
GAGGATGAGCTATCCTATAG+CGG + chr7_4:383196-383215 Msa1134020:intron 45.0%
CCTCTTTCCTAGGTTCTGTT+TGG - chr7_4:383598-383617 None:intergenic 45.0%
CCAAACAGAACCTAGGAAAG+AGG + chr7_4:383595-383614 Msa1134020:intron 45.0%
ACTGATCTTGCCTCTTTCCT+AGG - chr7_4:383608-383627 None:intergenic 45.0%
CCACTCTAGACAACCAATCA+AGG - chr7_4:383645-383664 None:intergenic 45.0%
! CCTTGATTGGTTGTCTAGAG+TGG + chr7_4:383642-383661 Msa1134020:intron 45.0%
GAAACCCTACAAAACCGACT+TGG + chr7_4:383797-383816 Msa1134020:intron 45.0%
!! CAAGTCCAAGTCGGTTTTGT+AGG - chr7_4:383805-383824 None:intergenic 45.0%
GTCACCTTACAAGTCCAAGT+CGG - chr7_4:383814-383833 None:intergenic 45.0%
TATAGGACCAGGTCTCTTAG+AGG - chr7_4:384267-384286 None:intergenic 45.0%
GATTTGTACATTCCGAAGCC+GGG + chr7_4:384488-384507 Msa1134020:intron 45.0%
ATTTGTACATTCCGAAGCCG+GGG + chr7_4:384489-384508 Msa1134020:intron 45.0%
AACTTGAACAGAAGAAGCCC+CGG - chr7_4:384509-384528 None:intergenic 45.0%
ATTCATGCAATGCAAGTGGC+TGG - chr7_4:384638-384657 None:intergenic 45.0%
TTGTACCAATCCACAAGCAC+TGG - chr7_4:385160-385179 None:intergenic 45.0%
!! GTAATGTGATGGATGGCATG+GGG + chr7_4:385244-385263 Msa1134020:intron 45.0%
AGTTAGCAGAAGTTCGCATG+AGG - chr7_4:385289-385308 None:intergenic 45.0%
! TTCCATCTTAGGGGGTGTAT+TGG + chr7_4:385449-385468 Msa1134020:intron 45.0%
ATCCAATACACCCCCTAAGA+TGG - chr7_4:385454-385473 None:intergenic 45.0%
ATAAAGAGAGGGGAGAAGAG+AGG + chr7_4:385747-385766 Msa1134020:intron 45.0%
GAGAGAGAGAGAGAAAAGAG+AGG + chr7_4:385804-385823 Msa1134020:intron 45.0%
GAAAAGAGAGGAGAGAGAGA+AGG + chr7_4:385862-385881 Msa1134020:intron 45.0%
AGGAGAGAGAGAAGGATGAA+GGG + chr7_4:385870-385889 Msa1134020:intron 45.0%
!! TGGATGGGGGAATGTTTTGA+GGG - chr7_4:386401-386420 None:intergenic 45.0%
! TTGGATGGGGGAATGTTTTG+AGG - chr7_4:386402-386421 None:intergenic 45.0%
! CTAAGAGTGTGTTTGGATGG+GGG - chr7_4:386414-386433 None:intergenic 45.0%
AATATGCAGGCTGGGTTTAC+TGG + chr7_4:386589-386608 Msa1134020:intron 45.0%
ATATGCAGGCTGGGTTTACT+GGG + chr7_4:386590-386609 Msa1134020:intron 45.0%
! CTATGGTCTAAAGCCTGTTG+TGG + chr7_4:386633-386652 Msa1134020:CDS 45.0%
CCCCATGATTTCTCTGTGTT+TGG + chr7_4:386761-386780 Msa1134020:intron 45.0%
AAACCACACCATACAGTTGG+AGG + chr7_4:387304-387323 Msa1134020:intron 45.0%
AACCACACCATACAGTTGGA+GGG + chr7_4:387305-387324 Msa1134020:intron 45.0%
AGCTCAAACCATAATCCGTG+GGG + chr7_4:387472-387491 Msa1134020:intron 45.0%
TGGAGGTGAATTAGAAGGGT+AGG + chr7_4:387495-387514 Msa1134020:intron 45.0%
GTGAATTAGAAGGGTAGGCA+TGG + chr7_4:387500-387519 Msa1134020:intron 45.0%
AAACCCCAACAGAAACCTGA+CGG + chr7_4:387526-387545 Msa1134020:intron 45.0%
ATCACGGGATTACATGGGTT+GGG - chr7_4:387647-387666 None:intergenic 45.0%
AATCACGGGATTACATGGGT+TGG - chr7_4:387648-387667 None:intergenic 45.0%
TTAGGAGGGCAATCAATCAC+GGG - chr7_4:387662-387681 None:intergenic 45.0%
AACTACAGATTTGTGGCTGG+AGG + chr7_4:387689-387708 Msa1134020:intron 45.0%
AAGCACTCCCTTCATCTTCT+TGG + chr7_4:388226-388245 Msa1134020:intron 45.0%
!! ATGCCCTGGGTTGAAAGTTT+TGG + chr7_4:388613-388632 Msa1134020:CDS 45.0%
GTGCCAAAACTTTCAACCCA+GGG - chr7_4:388619-388638 None:intergenic 45.0%
CAAGAACTTCGGCAGAAACA+GGG - chr7_4:388853-388872 None:intergenic 45.0%
TCAAGAACTTCGGCAGAAAC+AGG - chr7_4:388854-388873 None:intergenic 45.0%
ATGTGTTTGCTTGGTAGGAC+AGG - chr7_4:389289-389308 None:intergenic 45.0%
AAAGGAAGGAATCAGTGCTG+AGG + chr7_4:389355-389374 Msa1134020:CDS 45.0%
TGTCAGGAAAACCAACAGAC+TGG + chr7_4:389524-389543 Msa1134020:CDS 45.0%
TTCAACTGTCACCAGTCTGT+TGG - chr7_4:389538-389557 None:intergenic 45.0%
AGACTGGTGACAGTTGAAGA+AGG + chr7_4:389540-389559 Msa1134020:CDS 45.0%
GACTGGTGACAGTTGAAGAA+GGG + chr7_4:389541-389560 Msa1134020:CDS 45.0%
AATCTGTGCATCTGTCATCG+AGG + chr7_4:389590-389609 Msa1134020:CDS 45.0%
! TCTGTCATCGAGGAGAGTTT+TGG + chr7_4:389600-389619 Msa1134020:CDS 45.0%
!! CAGATTTGCTGCATAAGGCA+TGG - chr7_4:389670-389689 None:intergenic 45.0%
CATGCCTTATGCAGCAAATC+TGG + chr7_4:389668-389687 Msa1134020:CDS 45.0%
ATTTAGGCAGTTGCAGCCAT+AGG - chr7_4:389852-389871 None:intergenic 45.0%
! GAGGTTGTGGTGGAAATTTG+AGG - chr7_4:389950-389969 None:intergenic 45.0%
TAATTCCCAGCATATCTGGG+AGG + chr7_4:390087-390106 Msa1134020:three_prime_UTR 45.0%
AACATCCTCCCAGATATGCT+GGG - chr7_4:390095-390114 None:intergenic 45.0%
TAGCATACCGGAAACTGCAA+AGG + chr7_4:390241-390260 Msa1134020:three_prime_UTR 45.0%
!! AAGTTGGCCTTTGCAGTTTC+CGG - chr7_4:390251-390270 None:intergenic 45.0%
! GCGTTTGGGACTTTGAATTG+TGG + chr7_4:390372-390391 Msa1134020:three_prime_UTR 45.0%
TCTCAGAAGCAGGCTTATAC+CGG - chr7_4:390406-390425 None:intergenic 45.0%
AGTATGGGTATCTCAGAAGC+AGG - chr7_4:390416-390435 None:intergenic 45.0%
GGTCTTGCCAAACAGAACCT+AGG + chr7_4:383588-383607 Msa1134020:intron 50.0%
AGTGTAACGCCTCAGCATTG+AGG - chr7_4:384117-384136 None:intergenic 50.0%
! TGGAGAAGTATGGTCCTGAG+AGG + chr7_4:384966-384985 Msa1134020:CDS 50.0%
! GGAGAAGTATGGTCCTGAGA+GGG + chr7_4:384967-384986 Msa1134020:CDS 50.0%
!! TTTGCAGCCACTGATTTGCG+AGG + chr7_4:385052-385071 Msa1134020:intron 50.0%
CATGAAAGGAAGGACAGCGA+GGG - chr7_4:385088-385107 None:intergenic 50.0%
ACATGAAAGGAAGGACAGCG+AGG - chr7_4:385089-385108 None:intergenic 50.0%
TAGATGGATGCACAGATGGC+AGG - chr7_4:385194-385213 None:intergenic 50.0%
! ATGGCATGGGGTGTCATGTT+GGG + chr7_4:385256-385275 Msa1134020:intron 50.0%
AGGAGAGAGACGAAGAGAGA+AGG + chr7_4:385824-385843 Msa1134020:intron 50.0%
GGAGAGAGACGAAGAGAGAA+GGG + chr7_4:385825-385844 Msa1134020:intron 50.0%
AGAGAGGAGGGAGAAAAGAG+AGG + chr7_4:385850-385869 Msa1134020:intron 50.0%
GAGGAGAGAGAGAAGGATGA+AGG + chr7_4:385869-385888 Msa1134020:intron 50.0%
GCATTCCCCCATCCAAACAA+TGG + chr7_4:386333-386352 Msa1134020:intron 50.0%
GGGTTTACTGGGATTGGAGT+TGG + chr7_4:386601-386620 Msa1134020:CDS 50.0%
!! GGAGTTGGTGCTGCTTACTA+TGG + chr7_4:386616-386635 Msa1134020:CDS 50.0%
GGAATCTGCAAGCAATGCTC+TGG + chr7_4:386794-386813 Msa1134020:intron 50.0%
GGCAAACCACACCATACAGT+TGG + chr7_4:387301-387320 Msa1134020:intron 50.0%
ACCACACCATACAGTTGGAG+GGG + chr7_4:387306-387325 Msa1134020:intron 50.0%
TCAAACCATAATCCGTGGGG+TGG + chr7_4:387475-387494 Msa1134020:intron 50.0%
TCTAATTCACCTCCACCCCA+CGG - chr7_4:387490-387509 None:intergenic 50.0%
TGGGGTGGAGGTGAATTAGA+AGG + chr7_4:387490-387509 Msa1134020:intron 50.0%
GGGGTGGAGGTGAATTAGAA+GGG + chr7_4:387491-387510 Msa1134020:intron 50.0%
AACCCCAACAGAAACCTGAC+GGG + chr7_4:387527-387546 Msa1134020:intron 50.0%
ACTGATATTGTGTCCCCGTC+AGG - chr7_4:387544-387563 None:intergenic 50.0%
GGTGCCAAAACTTTCAACCC+AGG - chr7_4:388620-388639 None:intergenic 50.0%
TCCAGTTTCTGCCTTCCCAT+CGG + chr7_4:388875-388894 Msa1134020:CDS 50.0%
!! CCTTTGCTTTTCCGATGGGA+AGG - chr7_4:388889-388908 None:intergenic 50.0%
CCTTCCCATCGGAAAAGCAA+AGG + chr7_4:388886-388905 Msa1134020:CDS 50.0%
TTGCTTGGTAGGACAGGAAG+AGG - chr7_4:389283-389302 None:intergenic 50.0%
GCTGAGACACTAGCAAAGGA+AGG + chr7_4:389341-389360 Msa1134020:CDS 50.0%
! GAAGGAATCAGTGCTGAGGT+AGG + chr7_4:389359-389378 Msa1134020:intron 50.0%
!! TTGATGGTGGCTCGATCAAG+CGG - chr7_4:389498-389517 None:intergenic 50.0%
!! CCTGACAGAAGCATTGATGG+TGG - chr7_4:389511-389530 None:intergenic 50.0%
CCACCATCAATGCTTCTGTC+AGG + chr7_4:389508-389527 Msa1134020:CDS 50.0%
GAAGAAGGGTTTCCTCAGCA+TGG + chr7_4:389555-389574 Msa1134020:CDS 50.0%
ATGCCACAGATCTGTGCCTA+TGG + chr7_4:389833-389852 Msa1134020:CDS 50.0%
GAACATCCTCCCAGATATGC+TGG - chr7_4:390096-390115 None:intergenic 50.0%
CTCAGAAGCAGGCTTATACC+GGG - chr7_4:390405-390424 None:intergenic 50.0%
! GAGAGAGAGAGAGAGCGTAG+AGG - chr7_4:382418-382437 None:intergenic 55.0%
AACAGAAGAAGCCCCGGCTT+CGG - chr7_4:384503-384522 None:intergenic 55.0%
! TGCAATGCAAGTGGCTGGCT+AGG - chr7_4:384633-384652 None:intergenic 55.0%
TCTCGACACTCCCATCACTG+AGG + chr7_4:384991-385010 Msa1134020:CDS 55.0%
AAAGGAAGGACAGCGAGGGA+TGG - chr7_4:385084-385103 None:intergenic 55.0%
! GATGGCATGGGGTGTCATGT+TGG + chr7_4:385255-385274 Msa1134020:intron 55.0%
AAGAGAGGGGAGAAGAGAGG+AGG + chr7_4:385750-385769 Msa1134020:intron 55.0%
AGAGAGGGGAGAAGAGAGGA+GGG + chr7_4:385751-385770 Msa1134020:intron 55.0%
CGAAGAGAGAAGGGAGAGAG+AGG + chr7_4:385834-385853 Msa1134020:intron 55.0%
AGAGAGAAGGGAGAGAGAGG+AGG + chr7_4:385837-385856 Msa1134020:intron 55.0%
GAGAGAAGGGAGAGAGAGGA+GGG + chr7_4:385838-385857 Msa1134020:intron 55.0%
CAGGCTGGGTTTACTGGGAT+TGG + chr7_4:386595-386614 Msa1134020:intron 55.0%
CCACACCATACAGTTGGAGG+GGG + chr7_4:387307-387326 Msa1134020:intron 55.0%
AACCATAATCCGTGGGGTGG+AGG + chr7_4:387478-387497 Msa1134020:intron 55.0%
ACCCCAACAGAAACCTGACG+GGG + chr7_4:387528-387547 Msa1134020:intron 55.0%
TCCCCGTCAGGTTTCTGTTG+GGG - chr7_4:387532-387551 None:intergenic 55.0%
GTCCCCGTCAGGTTTCTGTT+GGG - chr7_4:387533-387552 None:intergenic 55.0%
TGTCCCCGTCAGGTTTCTGT+TGG - chr7_4:387534-387553 None:intergenic 55.0%
ACACCAGCAGCAGCACCATT+GGG - chr7_4:388402-388421 None:intergenic 55.0%
AACACCAGCAGCAGCACCAT+TGG - chr7_4:388403-388422 None:intergenic 55.0%
!! AATGGTGCTGCTGCTGGTGT+TGG + chr7_4:388402-388421 Msa1134020:CDS 55.0%
TCTTGGTATGGCTCATGCCC+TGG + chr7_4:388599-388618 Msa1134020:CDS 55.0%
CTTGGTATGGCTCATGCCCT+GGG + chr7_4:388600-388619 Msa1134020:CDS 55.0%
TCCGATGGGAAGGCAGAAAC+TGG - chr7_4:388879-388898 None:intergenic 55.0%
GGCTGCTGAGACACTAGCAA+AGG + chr7_4:389337-389356 Msa1134020:intron 55.0%
GGGTTTCCTCAGCATGGTGT+TGG + chr7_4:389561-389580 Msa1134020:CDS 55.0%
TGGCTATCTTGATGCACCGG+TGG + chr7_4:389620-389639 Msa1134020:CDS 55.0%
! GGAAAGATTGGCTGTCCCAC+AGG + chr7_4:389689-389708 Msa1134020:CDS 55.0%
CAGCCATAGGCACAGATCTG+TGG - chr7_4:389839-389858 None:intergenic 55.0%
CGAAGCGGTCCTCAATGCTG+AGG + chr7_4:384105-384124 Msa1134020:intron 60.0%
!! GGAGTGTCGAGAACCCTCTC+AGG - chr7_4:384983-385002 None:intergenic 60.0%
AGAGGAGGGAGAGGAGAGAG+AGG + chr7_4:385765-385784 Msa1134020:intron 60.0%
GAGGAGGGAGAGGAGAGAGA+GGG + chr7_4:385766-385785 Msa1134020:intron 60.0%
GAGAGAGAGGGAGAGGAGAG+AGG + chr7_4:385778-385797 Msa1134020:intron 60.0%
CCCCCTCCAACTGTATGGTG+TGG - chr7_4:387310-387329 None:intergenic 60.0%
CTGTGCCCCCTCCAACTGTA+TGG - chr7_4:387315-387334 None:intergenic 60.0%
! CATACAGTTGGAGGGGGCAC+AGG + chr7_4:387313-387332 Msa1134020:intron 60.0%
! CACCTCCACCCCACGGATTA+TGG - chr7_4:387483-387502 None:intergenic 60.0%
TGGTGGCTCGATCAAGCGGT+CGG - chr7_4:389494-389513 None:intergenic 60.0%
TCAGCGCCAACACCATGCTG+AGG - chr7_4:389570-389589 None:intergenic 60.0%
! GCACCGGTGGAGAGAATTGC+CGG + chr7_4:389633-389652 Msa1134020:CDS 60.0%
CACCGGTGGAGAGAATTGCC+GGG + chr7_4:389634-389653 Msa1134020:CDS 60.0%
ACCGGTGGAGAGAATTGCCG+GGG + chr7_4:389635-389654 Msa1134020:CDS 60.0%
AGGCATGGGAACATCAGCCC+CGG - chr7_4:389655-389674 None:intergenic 60.0%
GGGGAGAAGAGAGGAGGGAG+AGG + chr7_4:385756-385775 Msa1134020:intron 65.0%
GGGAGAGGAGAGAGAGGGAG+AGG + chr7_4:385771-385790 Msa1134020:intron 65.0%
!! GGACCCAATGGTGCTGCTGC+TGG + chr7_4:388396-388415 Msa1134020:CDS 65.0%
GCCCCGGCAATTCTCTCCAC+CGG - chr7_4:389639-389658 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 382248 390531 382248 ID=Msa1134020;Name=Msa1134020
chr7_4 mRNA 382248 390531 382248 ID=Msa1134020-mRNA-1;Parent=Msa1134020;Name=Msa1134020-mRNA-1;_AED=0.08;_eAED=0.08;_QI=273|1|1|1|1|1|14|662|361
chr7_4 exon 382248 382500 382248 ID=Msa1134020-mRNA-1:exon:127;Parent=Msa1134020-mRNA-1
chr7_4 exon 382740 382783 382740 ID=Msa1134020-mRNA-1:exon:128;Parent=Msa1134020-mRNA-1
chr7_4 exon 382874 382930 382874 ID=Msa1134020-mRNA-1:exon:129;Parent=Msa1134020-mRNA-1
chr7_4 exon 383014 383094 383014 ID=Msa1134020-mRNA-1:exon:130;Parent=Msa1134020-mRNA-1
chr7_4 exon 384817 384843 384817 ID=Msa1134020-mRNA-1:exon:131;Parent=Msa1134020-mRNA-1
chr7_4 exon 384950 385012 384950 ID=Msa1134020-mRNA-1:exon:132;Parent=Msa1134020-mRNA-1
chr7_4 exon 386598 386684 386598 ID=Msa1134020-mRNA-1:exon:133;Parent=Msa1134020-mRNA-1
chr7_4 exon 388315 388440 388315 ID=Msa1134020-mRNA-1:exon:134;Parent=Msa1134020-mRNA-1
chr7_4 exon 388590 388723 388590 ID=Msa1134020-mRNA-1:exon:135;Parent=Msa1134020-mRNA-1
chr7_4 exon 388835 388907 388835 ID=Msa1134020-mRNA-1:exon:136;Parent=Msa1134020-mRNA-1
chr7_4 exon 389014 389079 389014 ID=Msa1134020-mRNA-1:exon:137;Parent=Msa1134020-mRNA-1
chr7_4 exon 389338 389376 389338 ID=Msa1134020-mRNA-1:exon:138;Parent=Msa1134020-mRNA-1
chr7_4 exon 389471 389710 389471 ID=Msa1134020-mRNA-1:exon:139;Parent=Msa1134020-mRNA-1
chr7_4 exon 389801 390531 389801 ID=Msa1134020-mRNA-1:exon:140;Parent=Msa1134020-mRNA-1
chr7_4 five_prime_UTR 382248 382500 382248 ID=Msa1134020-mRNA-1:five_prime_utr;Parent=Msa1134020-mRNA-1
chr7_4 five_prime_UTR 382740 382759 382740 ID=Msa1134020-mRNA-1:five_prime_utr;Parent=Msa1134020-mRNA-1
chr7_4 CDS 382760 382783 382760 ID=Msa1134020-mRNA-1:cds;Parent=Msa1134020-mRNA-1
chr7_4 CDS 382874 382930 382874 ID=Msa1134020-mRNA-1:cds;Parent=Msa1134020-mRNA-1
chr7_4 CDS 383014 383094 383014 ID=Msa1134020-mRNA-1:cds;Parent=Msa1134020-mRNA-1
chr7_4 CDS 384817 384843 384817 ID=Msa1134020-mRNA-1:cds;Parent=Msa1134020-mRNA-1
chr7_4 CDS 384950 385012 384950 ID=Msa1134020-mRNA-1:cds;Parent=Msa1134020-mRNA-1
chr7_4 CDS 386598 386684 386598 ID=Msa1134020-mRNA-1:cds;Parent=Msa1134020-mRNA-1
chr7_4 CDS 388315 388440 388315 ID=Msa1134020-mRNA-1:cds;Parent=Msa1134020-mRNA-1
chr7_4 CDS 388590 388723 388590 ID=Msa1134020-mRNA-1:cds;Parent=Msa1134020-mRNA-1
chr7_4 CDS 388835 388907 388835 ID=Msa1134020-mRNA-1:cds;Parent=Msa1134020-mRNA-1
chr7_4 CDS 389014 389079 389014 ID=Msa1134020-mRNA-1:cds;Parent=Msa1134020-mRNA-1
chr7_4 CDS 389338 389376 389338 ID=Msa1134020-mRNA-1:cds;Parent=Msa1134020-mRNA-1
chr7_4 CDS 389471 389710 389471 ID=Msa1134020-mRNA-1:cds;Parent=Msa1134020-mRNA-1
chr7_4 CDS 389801 389869 389801 ID=Msa1134020-mRNA-1:cds;Parent=Msa1134020-mRNA-1
chr7_4 three_prime_UTR 389870 390531 389870 ID=Msa1134020-mRNA-1:three_prime_utr;Parent=Msa1134020-mRNA-1
Gene Sequence

>Msa1134020

ATGTTAGGTGTTATAAGAAACAAGAATCTTCTTCGGCCTTCCTTTTCCGCATTCAGACATCTCTCTTCTTCCGCTAAACAGATGACAGTGAGAGATGCTCTTAATTCAGCTCTTGATGAAGAAATGTCCGCCGATCCTAAAGTCTTCTTGATGGGTGAAGAGGTTGGAGAATATCAAGGTGCATACAAGATTTCCAAGGGACTATTGGAGAAGTATGGTCCTGAGAGGGTTCTCGACACTCCCATCACTGAGGCTGGGTTTACTGGGATTGGAGTTGGTGCTGCTTACTATGGTCTAAAGCCTGTTGTGGAGTTTATGACATTTAACTTCTCCATGCAGGCAATAGATCACATCATTAATTCTGCTGCAAAATCAAATTACATGTCTGCTGGGCAAATAAATGTACCTATTGTATTTAGAGGACCCAATGGTGCTGCTGCTGGTGTTGGTGCTCAGCACTCTCATTGTTATGCATCTTGGTATGGCTCATGCCCTGGGTTGAAAGTTTTGGCACCATATTCATCTGAAGATGCTCGTGGTTTACTTAAAGCTGCTATAAGGGACCCTGATCCTGTAGTTTTCCTTGAAAATGAGTTACTATATGGTGAGTCATTCCCTGTTTCTGCCGAAGTTCTTGATTCCAGTTTCTGCCTTCCCATCGGAAAAGCAAAGATTGAGAGAGAAGGGAAAGATGTGACTATTACAGCCTTCTCAAAAATGGTTGGCTTTGCTCTAAAGGCTGCTGAGACACTAGCAAAGGAAGGAATCAGTGCTGAGGTTATTAATTTAAGGTCAATCCGACCGCTTGATCGAGCCACCATCAATGCTTCTGTCAGGAAAACCAACAGACTGGTGACAGTTGAAGAAGGGTTTCCTCAGCATGGTGTTGGCGCTGAAATCTGTGCATCTGTCATCGAGGAGAGTTTTGGCTATCTTGATGCACCGGTGGAGAGAATTGCCGGGGCTGATGTTCCCATGCCTTATGCAGCAAATCTGGAAAGATTGGCTGTCCCACAGATTGAAGATATTGTTCGTGCTGCAAAGAGAGCATGCCACAGATCTGTGCCTATGGCTGCAACTGCCTAA

Protein sequence

>Msa1134020

MLGVIRNKNLLRPSFSAFRHLSSSAKQMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSHCYASWYGSCPGLKVLAPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKMVGFALKAAETLAKEGISAEVINLRSIRPLDRATINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERLAVPQIEDIVRAAKRACHRSVPMAATA*