Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019190 | XP_013448517.1 | 98.496 | 532 | 8 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1091 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019190 | sp|Q42290|MPPB_ARATH | 75.985 | 533 | 125 | 2 | 1 | 532 | 1 | 531 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019190 | A0A072TYG3 | 98.496 | 532 | 8 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1091 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0656320 | Msa1019190 | 0.814524 | 1.474736e-51 | -8.615850e-47 |
| Msa0169070 | Msa1019190 | 0.800424 | 1.450747e-48 | -8.615850e-47 |
| Msa0189080 | Msa1019190 | 0.809924 | 1.487641e-50 | -8.615850e-47 |
| Msa1019190 | Msa1046140 | 0.830718 | 2.508502e-55 | -8.615850e-47 |
| Msa1019190 | Msa1091030 | 0.836681 | 8.113925e-57 | -8.615850e-47 |
| Msa1019190 | Msa1104120 | 0.975723 | 1.770674e-140 | -8.615850e-47 |
| Msa1019190 | Msa1133950 | 0.835281 | 1.838825e-56 | -8.615850e-47 |
| Msa1019190 | Msa1134020 | 0.870139 | 1.828983e-66 | -8.615850e-47 |
| Msa1019190 | Msa1147690 | 0.910325 | 2.124493e-82 | -8.615850e-47 |
| Msa1019190 | Msa1334040 | 0.802319 | 5.934663e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019190 | MtrunA17_Chr7g0234701 | 98.496 | 532 | 8 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1091 |
| Msa1019190 | MtrunA17_Chr8g0340831 | 31.944 | 432 | 275 | 11 | 97 | 520 | 77 | 497 | 1.66e-59 | 205 |
| Msa1019190 | MtrunA17_Chr8g0389651 | 31.556 | 450 | 279 | 16 | 82 | 520 | 69 | 500 | 1.07e-55 | 194 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019190 | AT3G02090.1 | 75.985 | 533 | 125 | 2 | 1 | 532 | 1 | 531 | 0.0 | 856 |
| Msa1019190 | AT3G02090.2 | 75.644 | 505 | 120 | 2 | 1 | 504 | 1 | 503 | 0.0 | 803 |
| Msa1019190 | AT3G16480.1 | 30.377 | 451 | 290 | 11 | 84 | 526 | 63 | 497 | 1.21e-51 | 184 |
| Msa1019190 | AT1G51980.1 | 30.536 | 429 | 281 | 12 | 99 | 521 | 79 | 496 | 6.44e-51 | 182 |
| Msa1019190 | AT1G51980.2 | 32.021 | 381 | 243 | 11 | 99 | 473 | 79 | 449 | 2.79e-46 | 168 |
Find 187 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTAATTCATACAAGAATT+TGG | 0.107184 | 7_1:+40392090 | None:intergenic |
| TCCCCTTGGCAGAACCATTT+TGG | 0.120950 | 7_1:-40395882 | Msa1019190:CDS |
| TGTGCTCAATTTAAACTTAA+TGG | 0.136934 | 7_1:-40392275 | Msa1019190:three_prime_UTR |
| GGAAGAGGAGATTGAGAATA+TGG | 0.156727 | 7_1:-40397228 | Msa1019190:CDS |
| TTTGGAGCATATGATATTTA+AGG | 0.160878 | 7_1:-40397279 | Msa1019190:CDS |
| GCCTGTTGCGTTGGATATTT+TGG | 0.171866 | 7_1:-40397135 | Msa1019190:CDS |
| GTGTGGCTAGGGTTTGGTTT+GGG | 0.212653 | 7_1:+40397749 | None:intergenic |
| AGAGTTGTGATGCGAGTTTC+AGG | 0.218151 | 7_1:+40397422 | None:intergenic |
| CGTGTGTGGTCACGGATTTC+GGG | 0.227157 | 7_1:+40397458 | None:intergenic |
| TCCTGATTCAATTGCTTTGA+TGG | 0.229373 | 7_1:-40395309 | Msa1019190:CDS |
| GACAACCAAGTTGGCTTATC+AGG | 0.231981 | 7_1:-40394094 | Msa1019190:CDS |
| GAGAAAGGGATGTTATTCTT+AGG | 0.233093 | 7_1:-40397067 | Msa1019190:CDS |
| TCGTGTGTGGTCACGGATTT+CGG | 0.234643 | 7_1:+40397457 | None:intergenic |
| CCTCATTGATTTAGTGCATT+TGG | 0.251085 | 7_1:-40391997 | Msa1019190:three_prime_UTR |
| ATTAATTCATACAAGAATTT+GGG | 0.258457 | 7_1:+40392091 | None:intergenic |
| CAGAAGCCAGGGTGGGGTTC+GGG | 0.279001 | 7_1:+40392038 | None:intergenic |
| CCGAACCCCACCCTGGCTTC+TGG | 0.289464 | 7_1:-40392037 | Msa1019190:three_prime_UTR |
| AAGACCCGTGTCCTTGTAAT+TGG | 0.292153 | 7_1:+40395072 | None:intergenic |
| TCGCTTCTGCTTCACATTGA+TGG | 0.297186 | 7_1:-40392879 | Msa1019190:CDS |
| GAGGAGGAATGCGAGGGATT+TGG | 0.298473 | 7_1:-40397249 | Msa1019190:CDS |
| GTTCGGAGGTGGTGGGGAAG+GGG | 0.298980 | 7_1:+40397577 | None:intergenic |
| TGCAAGCAATGCTGGGTTCT+TGG | 0.313082 | 7_1:-40395283 | Msa1019190:CDS |
| CCAGAAGCCAGGGTGGGGTT+CGG | 0.319072 | 7_1:+40392037 | None:intergenic |
| AGGCCATCCAGAGGCATATA+TGG | 0.333653 | 7_1:+40392221 | None:intergenic |
| CAAAGATCACTTCCTCTGTT+TGG | 0.333829 | 7_1:+40395936 | None:intergenic |
| TGGTCACGGATTTCGGGTTT+AGG | 0.334517 | 7_1:+40397464 | None:intergenic |
| GGACTGCTACCGTTGGGGTT+TGG | 0.368224 | 7_1:-40397355 | Msa1019190:CDS |
| TTTAAACTTAATGGAATGTC+TGG | 0.369437 | 7_1:-40392266 | Msa1019190:three_prime_UTR |
| GGATGTTATTCTTAGGGAAA+TGG | 0.373559 | 7_1:-40397060 | Msa1019190:CDS |
| GATCCACGTTTCCTCAAATT+CGG | 0.382243 | 7_1:-40397491 | Msa1019190:CDS |
| TTGGAGCATATGATATTTAA+GGG | 0.382979 | 7_1:-40397278 | Msa1019190:CDS |
| GCTCAAGGACTGCTACCGTT+GGG | 0.383692 | 7_1:-40397361 | Msa1019190:CDS |
| TTACCTTGTCATAAATAAAT+CGG | 0.386383 | 7_1:+40392481 | None:intergenic |
| AGGGCTGCCCGTGTGTGGCT+AGG | 0.390791 | 7_1:+40397737 | None:intergenic |
| TTCGGAGGTGGTGGGGAAGG+GGG | 0.391411 | 7_1:+40397578 | None:intergenic |
| TGCAACACGTTTAATTGTAC+TGG | 0.394685 | 7_1:+40392506 | None:intergenic |
| ACGTTCGGAGGTGGTGGGGA+AGG | 0.396814 | 7_1:+40397575 | None:intergenic |
| CTAGCAAACAATTCAGCAAA+TGG | 0.400249 | 7_1:+40392546 | None:intergenic |
| CGTCTGAACCAGTTGTAATC+AGG | 0.402332 | 7_1:+40392336 | None:intergenic |
| GATGGTCATGCAAGCAATGC+TGG | 0.404594 | 7_1:-40395291 | Msa1019190:CDS |
| GTGGCGACACGGAGTCCGTT+AGG | 0.407403 | 7_1:+40397398 | None:intergenic |
| ATTCAAAGTTTGATGAGAAT+CGG | 0.408002 | 7_1:-40397097 | Msa1019190:CDS |
| TGTGTGGCTAGGGTTTGGTT+TGG | 0.409673 | 7_1:+40397748 | None:intergenic |
| GCCCGTGTGTGGCTAGGGTT+TGG | 0.412591 | 7_1:+40397743 | None:intergenic |
| CGTTCGGAGGTGGTGGGGAA+GGG | 0.413130 | 7_1:+40397576 | None:intergenic |
| ACCATCAAAGCAATTGAATC+AGG | 0.413135 | 7_1:+40395308 | None:intergenic |
| TTGTTTCAGCTACTCACATA+TGG | 0.414073 | 7_1:-40392579 | Msa1019190:intron |
| AATTTGAGGAAACGTGGATC+TGG | 0.422726 | 7_1:+40397494 | None:intergenic |
| AGCGTTTACCTGATTACAAC+TGG | 0.423477 | 7_1:-40392344 | Msa1019190:CDS |
| AGCAACTCAGTTGGTTGAAA+AGG | 0.424795 | 7_1:-40395522 | Msa1019190:CDS |
| ATCATGACGTTCGGAGGTGG+TGG | 0.429511 | 7_1:+40397569 | None:intergenic |
| TAATCAGGTAAACGCTGAAT+AGG | 0.429534 | 7_1:+40392351 | None:intergenic |
| TTCAAGGTGATAGCTGCATC+TGG | 0.431989 | 7_1:-40395617 | Msa1019190:intron |
| CTCAAAAGAGACCAGAAGCC+AGG | 0.433705 | 7_1:+40392026 | None:intergenic |
| GTTCTGAGCAGGTCCCAAAA+TGG | 0.434416 | 7_1:+40395868 | None:intergenic |
| GCCAAAATATCCAACGCAAC+AGG | 0.437846 | 7_1:+40397134 | None:intergenic |
| GTGCTCTCAGCCGGACTGCT+TGG | 0.443674 | 7_1:-40394145 | Msa1019190:intron |
| AGCTGAAGATATTGGTCGTC+AGG | 0.444449 | 7_1:-40392844 | Msa1019190:intron |
| AGAAAGGGATGTTATTCTTA+GGG | 0.445881 | 7_1:-40397066 | Msa1019190:CDS |
| TGCCTCTGGATGGCCTGTTT+AGG | 0.447715 | 7_1:-40392214 | Msa1019190:three_prime_UTR |
| CGACCAATATCTTCAGCTAC+AGG | 0.448715 | 7_1:+40392849 | None:intergenic |
| TGGGTGTCCGCCGGGATGAA+CGG | 0.451419 | 7_1:+40397675 | None:intergenic |
| TGCATTGCCCTAAAATTGCT+TGG | 0.456703 | 7_1:-40392066 | Msa1019190:three_prime_UTR |
| GGGCTGCCCGTGTGTGGCTA+GGG | 0.459684 | 7_1:+40397738 | None:intergenic |
| CTCCGTCTCAAATCTCGAAC+CGG | 0.463201 | 7_1:+40397325 | None:intergenic |
| GGTTCAGACGCAGAACCTAC+TGG | 0.465267 | 7_1:-40392323 | Msa1019190:CDS |
| TATTCCTCTTGCACAATTTG+CGG | 0.470822 | 7_1:-40395360 | Msa1019190:CDS |
| TAGCAAACAATTCAGCAAAT+GGG | 0.475811 | 7_1:+40392547 | None:intergenic |
| TTCTGCCAAGGGGAGTGTAC+TGG | 0.482436 | 7_1:+40395891 | None:intergenic |
| GAAGAGGAGATTGAGAATAT+GGG | 0.483391 | 7_1:-40397227 | Msa1019190:CDS |
| GCTGTTGTCAGTGATGTAAA+TGG | 0.483428 | 7_1:-40392129 | Msa1019190:three_prime_UTR |
| TGTTACGCGTGCTCGCAATC+AGG | 0.484599 | 7_1:-40394058 | Msa1019190:intron |
| ATGTACTCCATATATGCCTC+TGG | 0.485742 | 7_1:-40392228 | Msa1019190:three_prime_UTR |
| AGCCCTGTAGCTGAAGATAT+TGG | 0.489455 | 7_1:-40392852 | Msa1019190:CDS |
| GAATGCGAGGGATTTGGAAG+AGG | 0.493011 | 7_1:-40397243 | Msa1019190:CDS |
| AAAACGATGAAATAGAGAAA+GGG | 0.495584 | 7_1:+40397797 | None:intergenic |
| GTTTCTCCCGAACCCCACCC+TGG | 0.495802 | 7_1:-40392044 | Msa1019190:three_prime_UTR |
| GGCTTTCAACACCAATTACA+AGG | 0.496777 | 7_1:-40395083 | Msa1019190:CDS |
| GTTTAGGTGAACCGAATTTG+AGG | 0.498343 | 7_1:+40397480 | None:intergenic |
| ACAGACTACTTATTATGCTA+AGG | 0.499150 | 7_1:-40397174 | Msa1019190:CDS |
| GGATCGGATTGATGTGAGGA+TGG | 0.500510 | 7_1:+40397655 | None:intergenic |
| GGATGTTGCTATTGCTGCCA+TGG | 0.504114 | 7_1:-40392376 | Msa1019190:CDS |
| ATTGTCTTAATGTTCTGAGC+AGG | 0.507414 | 7_1:+40395857 | None:intergenic |
| TGTGGCTAGGGTTTGGTTTG+GGG | 0.512754 | 7_1:+40397750 | None:intergenic |
| GACAGATCATCCAAGCAGTC+CGG | 0.513338 | 7_1:+40394135 | None:intergenic |
| AGAATCGGATTAGTCGAGAA+AGG | 0.515768 | 7_1:-40397082 | Msa1019190:CDS |
| GTAATCCTGTAGATGAGCTT+TGG | 0.516737 | 7_1:+40395832 | None:intergenic |
| GTTGGGGTTTGGATCGATGC+CGG | 0.517454 | 7_1:-40397344 | Msa1019190:CDS |
| AACCAAACCCTAGCCACACA+CGG | 0.518504 | 7_1:-40397745 | Msa1019190:five_prime_UTR |
| AGAGGATTCGTGTGTGGTCA+CGG | 0.519419 | 7_1:+40397450 | None:intergenic |
| TAGATCATGACGTTCGGAGG+TGG | 0.522877 | 7_1:+40397566 | None:intergenic |
| GTTTATCTACATACCATCCT+AGG | 0.523412 | 7_1:+40395788 | None:intergenic |
| ATGAACGGCGGACTAGGGTG+AGG | 0.524492 | 7_1:+40397690 | None:intergenic |
| TTCAACCAACTGAGTTGCTG+TGG | 0.525634 | 7_1:+40395526 | None:intergenic |
| TGGCGACACGGAGTCCGTTA+GGG | 0.529967 | 7_1:+40397399 | None:intergenic |
| ATGTGAGGATGGGTGTCCGC+CGG | 0.532360 | 7_1:+40397666 | None:intergenic |
| AGAGACCAGAAGCCAGGGTG+GGG | 0.532899 | 7_1:+40392032 | None:intergenic |
| TATTTAAGGGGACGGAGAGG+AGG | 0.534779 | 7_1:-40397265 | Msa1019190:CDS |
| CGATCGTAGATCATGACGTT+CGG | 0.535430 | 7_1:+40397560 | None:intergenic |
| GGTGGGATTTGTTGACAACT+TGG | 0.537207 | 7_1:+40395547 | None:intergenic |
| TATTCTTAGGGAAATGGAAG+AGG | 0.540857 | 7_1:-40397054 | Msa1019190:intron |
| AATCACCAAAGCTCATCTAC+AGG | 0.542257 | 7_1:-40395837 | Msa1019190:CDS |
| TCCCAAAATGGTTCTGCCAA+GGG | 0.542944 | 7_1:+40395880 | None:intergenic |
| TTTGAGACGGAGGAGAGTAA+TGG | 0.543184 | 7_1:-40397314 | Msa1019190:CDS |
| CTCAAGGACTGCTACCGTTG+GGG | 0.547160 | 7_1:-40397360 | Msa1019190:CDS |
| AATGTATGAGACAACCAAGT+TGG | 0.550313 | 7_1:-40394103 | Msa1019190:CDS |
| TGGTGTTTATGCTGTCGCTA+AGG | 0.550888 | 7_1:-40395047 | Msa1019190:intron |
| TGAAACCTGATAAGCCAACT+TGG | 0.560316 | 7_1:+40394089 | None:intergenic |
| GCTACCGCAAATTGTGCAAG+AGG | 0.561891 | 7_1:+40395356 | None:intergenic |
| TGGAATAAGACAGCAGGAGG+GGG | 0.561986 | 7_1:-40395263 | Msa1019190:CDS |
| GTTGATCGTCATGGTGGAGA+GGG | 0.562655 | 7_1:+40397718 | None:intergenic |
| GGCAGCGGAGGTGGAGAGAG+TGG | 0.562794 | 7_1:+40397631 | None:intergenic |
| TGAAGTTGCAGAAAGCATGA+TGG | 0.563113 | 7_1:-40395104 | Msa1019190:CDS |
| AGACACATTACACTGCTCCT+AGG | 0.563685 | 7_1:-40395805 | Msa1019190:CDS |
| GGACGGAGAGGAGGAATGCG+AGG | 0.564393 | 7_1:-40397256 | Msa1019190:CDS |
| GACAAAGTCTATAGCACACT+CGG | 0.565204 | 7_1:-40397842 | Msa1019190:five_prime_UTR |
| GAATCGGATTAGTCGAGAAA+GGG | 0.565651 | 7_1:-40397081 | Msa1019190:CDS |
| GTCCCAAAATGGTTCTGCCA+AGG | 0.566241 | 7_1:+40395879 | None:intergenic |
| CGGTAGCAGTCCTTGAGCTA+AGG | 0.566416 | 7_1:+40397366 | None:intergenic |
| GGCTAGACTCCGTGGCGACA+CGG | 0.568095 | 7_1:+40397387 | None:intergenic |
| TATTATGCTAAGGTTTCGCA+AGG | 0.570942 | 7_1:-40397164 | Msa1019190:CDS |
| CAACACCAATTACAAGGACA+CGG | 0.571137 | 7_1:-40395077 | Msa1019190:CDS |
| TGTTGATCGTCATGGTGGAG+AGG | 0.571806 | 7_1:+40397717 | None:intergenic |
| AGGGGATGTGCCTGTTGCGT+TGG | 0.572773 | 7_1:-40397144 | Msa1019190:CDS |
| CATGACGTTCGGAGGTGGTG+GGG | 0.573072 | 7_1:+40397571 | None:intergenic |
| ACTGGAAAGCGGTTGCGTGT+AGG | 0.574119 | 7_1:+40395909 | None:intergenic |
| ATGGTCATGCAAGCAATGCT+GGG | 0.578859 | 7_1:-40395290 | Msa1019190:CDS |
| TGTGAGGATGGGTGTCCGCC+GGG | 0.579096 | 7_1:+40397667 | None:intergenic |
| TTATGCTAAGGTTTCGCAAG+GGG | 0.582967 | 7_1:-40397162 | Msa1019190:CDS |
| GCATATGATATTTAAGGGGA+CGG | 0.584800 | 7_1:-40397273 | Msa1019190:CDS |
| GTTGGCTTATCAGGTTTCAG+AGG | 0.585578 | 7_1:-40394085 | Msa1019190:CDS |
| TTAATTCATACAAGAATTTG+GGG | 0.585655 | 7_1:+40392092 | None:intergenic |
| GCTTTCCAGTACACTCCCCT+TGG | 0.586622 | 7_1:-40395896 | Msa1019190:CDS |
| TCATGACGTTCGGAGGTGGT+GGG | 0.587041 | 7_1:+40397570 | None:intergenic |
| GGTTCTTGGAATAAGACAGC+AGG | 0.587947 | 7_1:-40395269 | Msa1019190:CDS |
| TGGAGAGGGCTGCCCGTGTG+TGG | 0.596123 | 7_1:+40397732 | None:intergenic |
| TCAAAAGAGACCAGAAGCCA+GGG | 0.597227 | 7_1:+40392027 | None:intergenic |
| GGAAAGCGGTTGCGTGTAGG+TGG | 0.597858 | 7_1:+40395912 | None:intergenic |
| GAGGAGATTGAGAATATGGG+TGG | 0.598135 | 7_1:-40397224 | Msa1019190:CDS |
| TCGTAGATCATGACGTTCGG+AGG | 0.598880 | 7_1:+40397563 | None:intergenic |
| GATCGGATTGATGTGAGGAT+GGG | 0.599279 | 7_1:+40397656 | None:intergenic |
| TAACGGACTCCGTGTCGCCA+CGG | 0.602370 | 7_1:-40397396 | Msa1019190:CDS |
| GATGTTGCTATTGCTGCCAT+GGG | 0.603073 | 7_1:-40392375 | Msa1019190:CDS |
| AACCAACTGAGTTGCTGTGG+TGG | 0.603366 | 7_1:+40395529 | None:intergenic |
| GAGGAGTTTGTTGATCGTCA+TGG | 0.603721 | 7_1:+40397709 | None:intergenic |
| TCTGAGCTAGCACAGCGAGT+TGG | 0.603978 | 7_1:-40395133 | Msa1019190:CDS |
| AGGTGGAGAGAGTGGCGGAT+CGG | 0.604875 | 7_1:+40397639 | None:intergenic |
| CCCAAAATGGTTCTGCCAAG+GGG | 0.606028 | 7_1:+40395881 | None:intergenic |
| AAGAGACCAGAAGCCAGGGT+GGG | 0.607011 | 7_1:+40392031 | None:intergenic |
| ACCAACTGAGTTGCTGTGGT+GGG | 0.607905 | 7_1:+40395530 | None:intergenic |
| GAACTAATAGCGGTTCCAGT+AGG | 0.607907 | 7_1:+40392308 | None:intergenic |
| ACATTACACTGCTCCTAGGA+TGG | 0.609322 | 7_1:-40395801 | Msa1019190:intron |
| TGCCGGTTCGAGATTTGAGA+CGG | 0.609632 | 7_1:-40397327 | Msa1019190:CDS |
| TGGAGCATATGATATTTAAG+GGG | 0.611078 | 7_1:-40397277 | Msa1019190:CDS |
| ACCAAACCCTAGCCACACAC+GGG | 0.612225 | 7_1:-40397744 | Msa1019190:five_prime_UTR |
| AGGAGATTGAGAATATGGGT+GGG | 0.612564 | 7_1:-40397223 | Msa1019190:CDS |
| CGCATCACAACTCTCCCTAA+CGG | 0.612727 | 7_1:-40397413 | Msa1019190:CDS |
| ATTATGCTAAGGTTTCGCAA+GGG | 0.613708 | 7_1:-40397163 | Msa1019190:CDS |
| AAACCGATTTATTTATGACA+AGG | 0.619571 | 7_1:-40392484 | Msa1019190:intron |
| TCCCACCACAGCAACTCAGT+TGG | 0.620192 | 7_1:-40395531 | Msa1019190:CDS |
| TCTTGGAATAAGACAGCAGG+AGG | 0.621637 | 7_1:-40395266 | Msa1019190:CDS |
| AACACCAATTACAAGGACAC+GGG | 0.626009 | 7_1:-40395076 | Msa1019190:CDS |
| GACGGAGAGGAGGAATGCGA+GGG | 0.628316 | 7_1:-40397255 | Msa1019190:CDS |
| TTGGAATAAGACAGCAGGAG+GGG | 0.635884 | 7_1:-40395264 | Msa1019190:CDS |
| GACCAATATCTTCAGCTACA+GGG | 0.642469 | 7_1:+40392850 | None:intergenic |
| AAACTAAGATGAACTAATAG+CGG | 0.642849 | 7_1:+40392298 | None:intergenic |
| GTGTCCGCCGGGATGAACGG+CGG | 0.642933 | 7_1:+40397678 | None:intergenic |
| CCAAATGCACTAAATCAATG+AGG | 0.645263 | 7_1:+40391997 | None:intergenic |
| CTTGGAATAAGACAGCAGGA+GGG | 0.645316 | 7_1:-40395265 | Msa1019190:CDS |
| TAAACGCTGAATAGGTCCCA+TGG | 0.648283 | 7_1:+40392359 | None:intergenic |
| AAAGAGACCAGAAGCCAGGG+TGG | 0.649646 | 7_1:+40392030 | None:intergenic |
| TGATATTTAAGGGGACGGAG+AGG | 0.657266 | 7_1:-40397268 | Msa1019190:CDS |
| AAGGGGAGTGTACTGGAAAG+CGG | 0.657512 | 7_1:+40395898 | None:intergenic |
| ACTCCATATATGCCTCTGGA+TGG | 0.664489 | 7_1:-40392224 | Msa1019190:three_prime_UTR |
| GAGCGGAGAGGATTCGTGTG+TGG | 0.666040 | 7_1:+40397444 | None:intergenic |
| TGCGAGTTTCAGGAGCGGAG+AGG | 0.669751 | 7_1:+40397432 | None:intergenic |
| GGCCTAAACAGGCCATCCAG+AGG | 0.673346 | 7_1:+40392212 | None:intergenic |
| TGTGATGCGAGTTTCAGGAG+CGG | 0.673954 | 7_1:+40397427 | None:intergenic |
| CGGTTCGAGATTTGAGACGG+AGG | 0.674101 | 7_1:-40397324 | Msa1019190:CDS |
| TGAGCTAAGGCTAGACTCCG+TGG | 0.675517 | 7_1:+40397379 | None:intergenic |
| GAACCGAATTTGAGGAAACG+TGG | 0.678087 | 7_1:+40397488 | None:intergenic |
| GTAGGTTGAGGGCCAAACAG+AGG | 0.679038 | 7_1:-40395948 | Msa1019190:intron |
| AGCGGAGGTGGAGAGAGTGG+CGG | 0.691471 | 7_1:+40397634 | None:intergenic |
| GAGTTTGTTGATCGTCATGG+TGG | 0.694220 | 7_1:+40397712 | None:intergenic |
| GGCATCGATCCAAACCCCAA+CGG | 0.698937 | 7_1:+40397346 | None:intergenic |
| TGGCGGATCGGATTGATGTG+AGG | 0.715947 | 7_1:+40397651 | None:intergenic |
| TAGTCCGCCGTTCATCCCGG+CGG | 0.725807 | 7_1:-40397682 | Msa1019190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAATTAAGACAAAAT+AGG | + | chr7_1:40393804-40393823 | None:intergenic | 10.0% |
| !! | TTAAATATTATAACCTATAA+TGG | - | chr7_1:40395081-40395100 | Msa1019190:CDS | 10.0% |
| !!! | TAATTTTTATCATTCAAAAT+TGG | + | chr7_1:40396143-40396162 | None:intergenic | 10.0% |
| !! | TGCAAATTAAATTAATTTAT+GGG | - | chr7_1:40396251-40396270 | Msa1019190:intron | 10.0% |
| !! | AATAAGTATGAAATATTAAA+TGG | + | chr7_1:40397219-40397238 | None:intergenic | 10.0% |
| !!! | ATTTTTCATTTATTTGTTAT+AGG | - | chr7_1:40397640-40397659 | Msa1019190:CDS | 10.0% |
| !!! | GAGTAAAAAATTAGATTTTA+AGG | - | chr7_1:40393281-40393300 | Msa1019190:intron | 15.0% |
| !!! | ATTTTTTTTTTGTTGTTGTA+AGG | - | chr7_1:40393344-40393363 | Msa1019190:intron | 15.0% |
| !! | ATTATTACAACAACAAATAT+CGG | + | chr7_1:40393564-40393583 | None:intergenic | 15.0% |
| !! | GTTGTTGTAATAATAATAAT+TGG | - | chr7_1:40393570-40393589 | Msa1019190:intron | 15.0% |
| !!! | GTCTTAATTTTTTATTTGTT+TGG | - | chr7_1:40393809-40393828 | Msa1019190:intron | 15.0% |
| !! | TAATATATAAATATGGAAGT+TGG | - | chr7_1:40394155-40394174 | Msa1019190:intron | 15.0% |
| !!! | TTTGAAACTATAATAGTTAA+TGG | - | chr7_1:40395368-40395387 | Msa1019190:CDS | 15.0% |
| !! | GTGCAAATTAAATTAATTTA+TGG | - | chr7_1:40396250-40396269 | Msa1019190:intron | 15.0% |
| !! | GCAAATTAAATTAATTTATG+GGG | - | chr7_1:40396252-40396271 | Msa1019190:intron | 15.0% |
| !! | CAAATTAAATTAATTTATGG+GGG | - | chr7_1:40396253-40396272 | Msa1019190:intron | 15.0% |
| !! | AACAAATAAATGAAAAATGA+TGG | + | chr7_1:40397638-40397657 | None:intergenic | 15.0% |
| !! | ATTAATTCATACAAGAATTT+GGG | + | chr7_1:40397738-40397757 | None:intergenic | 15.0% |
| !! | TATTAATTCATACAAGAATT+TGG | + | chr7_1:40397739-40397758 | None:intergenic | 15.0% |
| !! | TATGAAAAAACAACTTATGA+AGG | - | chr7_1:40393122-40393141 | Msa1019190:intron | 20.0% |
| !!! | ATTTTGAAGCCTTTTTTATT+TGG | - | chr7_1:40393469-40393488 | Msa1019190:intron | 20.0% |
| !!! | GATTTCTAAATCCTTTTTAA+AGG | + | chr7_1:40393751-40393770 | None:intergenic | 20.0% |
| !! | GATTTAGAAATCAGAAAAAA+AGG | - | chr7_1:40393759-40393778 | Msa1019190:intron | 20.0% |
| !!! | TAAATGATATTGCTTTTTGT+AGG | - | chr7_1:40393860-40393879 | Msa1019190:intron | 20.0% |
| !! | ATAAATCAACTATATCAACA+GGG | + | chr7_1:40394394-40394413 | None:intergenic | 20.0% |
| !! | AATAAATCAACTATATCAAC+AGG | + | chr7_1:40394395-40394414 | None:intergenic | 20.0% |
| !! | AGGAGAAAAGAAATTATATT+TGG | + | chr7_1:40395308-40395327 | None:intergenic | 20.0% |
| !!! | TTTTTATCATTCAAAATTGG+TGG | + | chr7_1:40396140-40396159 | None:intergenic | 20.0% |
| !!! | GATAAGCATTTTAACTAAAT+TGG | + | chr7_1:40396610-40396629 | None:intergenic | 20.0% |
| !! | TTACCTTGTCATAAATAAAT+CGG | + | chr7_1:40397348-40397367 | None:intergenic | 20.0% |
| !! | TGCATAAATATTACAAAAAC+AGG | + | chr7_1:40397666-40397685 | None:intergenic | 20.0% |
| !! | TTAATTCATACAAGAATTTG+GGG | + | chr7_1:40397737-40397756 | None:intergenic | 20.0% |
| ! | AAAACGATGAAATAGAGAAA+GGG | + | chr7_1:40392032-40392051 | None:intergenic | 25.0% |
| ! | AAAAACGATGAAATAGAGAA+AGG | + | chr7_1:40392033-40392052 | None:intergenic | 25.0% |
| !! | TTTGGAGCATATGATATTTA+AGG | - | chr7_1:40392547-40392566 | Msa1019190:CDS | 25.0% |
| ! | TTGGAGCATATGATATTTAA+GGG | - | chr7_1:40392548-40392567 | Msa1019190:CDS | 25.0% |
| ! | ATTCAAAGTTTGATGAGAAT+CGG | - | chr7_1:40392729-40392748 | Msa1019190:intron | 25.0% |
| !!! | TTGACATAAGTTTTAGCTTA+TGG | - | chr7_1:40392920-40392939 | Msa1019190:intron | 25.0% |
| !!! | TGACATAAGTTTTAGCTTAT+GGG | - | chr7_1:40392921-40392940 | Msa1019190:intron | 25.0% |
| !!! | ACTTATTGCGATTTTTTTGT+GGG | - | chr7_1:40393046-40393065 | Msa1019190:intron | 25.0% |
| ! | CTAATTTATTTGCCCAAAAT+AGG | + | chr7_1:40393093-40393112 | None:intergenic | 25.0% |
| !!! | TGGCTTATTTTTTTAGCTTA+TGG | + | chr7_1:40393201-40393220 | None:intergenic | 25.0% |
| ! | AAAAAGGCTTCAAAATAGAA+TGG | + | chr7_1:40393465-40393484 | None:intergenic | 25.0% |
| ! | TCTACACATCCAAATAAAAA+AGG | + | chr7_1:40393481-40393500 | None:intergenic | 25.0% |
| !! | GAATGAGCTATATTTTACAT+TGG | + | chr7_1:40393683-40393702 | None:intergenic | 25.0% |
| ! | AAGTATAGTCCAATAGATAA+AGG | - | chr7_1:40393705-40393724 | Msa1019190:intron | 25.0% |
| !!! | AATTTTACTTTGTTGATTGG+GGG | + | chr7_1:40394624-40394643 | None:intergenic | 25.0% |
| !!! | GAATTTTACTTTGTTGATTG+GGG | + | chr7_1:40394625-40394644 | None:intergenic | 25.0% |
| !!! | GGAATTTTACTTTGTTGATT+GGG | + | chr7_1:40394626-40394645 | None:intergenic | 25.0% |
| ! | ATCCATAAGAAAACCAAATT+AGG | + | chr7_1:40394810-40394829 | None:intergenic | 25.0% |
| ! | TGTTAAACAAAGTAGTACAT+TGG | - | chr7_1:40394834-40394853 | Msa1019190:intron | 25.0% |
| ! | ATCTATGAAAAACTACAAGA+GGG | + | chr7_1:40394937-40394956 | None:intergenic | 25.0% |
| ! | TATCTATGAAAAACTACAAG+AGG | + | chr7_1:40394938-40394957 | None:intergenic | 25.0% |
| !!! | GTTGTATTTAACTTGTCAAT+CGG | - | chr7_1:40394991-40395010 | Msa1019190:intron | 25.0% |
| ! | TATCTTCAATAGACCATTAT+AGG | + | chr7_1:40395097-40395116 | None:intergenic | 25.0% |
| ! | AGGTTATTTAACAAATTCAG+TGG | + | chr7_1:40395123-40395142 | None:intergenic | 25.0% |
| !!! | TTTTAGTTAGATTCAGTGAT+TGG | - | chr7_1:40395180-40395199 | Msa1019190:intron | 25.0% |
| ! | AAAAATAAAGTAGAAGTCCT+TGG | + | chr7_1:40395336-40395355 | None:intergenic | 25.0% |
| ! | TTGCTAATTGAATATGACAA+TGG | - | chr7_1:40395823-40395842 | Msa1019190:CDS | 25.0% |
| ! | TTGAATATGACAATGGAATT+TGG | - | chr7_1:40395830-40395849 | Msa1019190:CDS | 25.0% |
| !! | GCTTTATATTAAGAAGCTTT+TGG | - | chr7_1:40395858-40395877 | Msa1019190:CDS | 25.0% |
| !!! | CTACAGAGTTAATTTTGTTT+TGG | - | chr7_1:40395905-40395924 | Msa1019190:CDS | 25.0% |
| !!! | ATTGAGGAAGTATTGAATTT+AGG | + | chr7_1:40396008-40396027 | None:intergenic | 25.0% |
| ! | AGTAACTAAGAATTAGATTG+AGG | + | chr7_1:40396024-40396043 | None:intergenic | 25.0% |
| !!! | GTTACTAGTTTCTTTAAGAT+AGG | - | chr7_1:40396038-40396057 | Msa1019190:intron | 25.0% |
| !! | ATTTATGATGCCATATTTTG+TGG | - | chr7_1:40396205-40396224 | Msa1019190:intron | 25.0% |
| ! | TAAAGAAAGACCACAAAATA+TGG | + | chr7_1:40396218-40396237 | None:intergenic | 25.0% |
| ! | ACTATGACATGAAAAATGTA+AGG | + | chr7_1:40396521-40396540 | None:intergenic | 25.0% |
| ! | CATTCAAACTAAATTTCTGA+TGG | - | chr7_1:40396688-40396707 | Msa1019190:intron | 25.0% |
| ! | TCATTCTCTACTATTATACA+AGG | - | chr7_1:40397058-40397077 | Msa1019190:CDS | 25.0% |
| ! | TACTATTATACAAGGACTTT+AGG | - | chr7_1:40397066-40397085 | Msa1019190:CDS | 25.0% |
| ! | TGAAATATTAAATGGTAGCA+CGG | + | chr7_1:40397211-40397230 | None:intergenic | 25.0% |
| !! | AAACCGATTTATTTATGACA+AGG | - | chr7_1:40397342-40397361 | Msa1019190:CDS | 25.0% |
| ! | AAACTAAGATGAACTAATAG+CGG | + | chr7_1:40397531-40397550 | None:intergenic | 25.0% |
| ! | TGTGCTCAATTTAAACTTAA+TGG | - | chr7_1:40397551-40397570 | Msa1019190:CDS | 25.0% |
| ! | TTTAAACTTAATGGAATGTC+TGG | - | chr7_1:40397560-40397579 | Msa1019190:CDS | 25.0% |
| !!! | TAATGGAACTGCTCATTTTT+TGG | - | chr7_1:40392529-40392548 | Msa1019190:CDS | 30.0% |
| TGGAGCATATGATATTTAAG+GGG | - | chr7_1:40392549-40392568 | Msa1019190:CDS | 30.0% | |
| ACAGACTACTTATTATGCTA+AGG | - | chr7_1:40392652-40392671 | Msa1019190:intron | 30.0% | |
| AGAAAGGGATGTTATTCTTA+GGG | - | chr7_1:40392760-40392779 | Msa1019190:intron | 30.0% | |
| !! | TTTAACATGTTTGTTGTGAG+TGG | - | chr7_1:40392869-40392888 | Msa1019190:CDS | 30.0% |
| !!! | GACTTATTGCGATTTTTTTG+TGG | - | chr7_1:40393045-40393064 | Msa1019190:intron | 30.0% |
| !!! | CGATTTTTTTGTGGGATTTT+GGG | - | chr7_1:40393054-40393073 | Msa1019190:intron | 30.0% |
| ATGTGTAGAAGTTGTAGTAT+TGG | - | chr7_1:40393492-40393511 | Msa1019190:intron | 30.0% | |
| TTACAACAACAAATATCGGT+GGG | + | chr7_1:40393560-40393579 | None:intergenic | 30.0% | |
| ATTACAACAACAAATATCGG+TGG | + | chr7_1:40393561-40393580 | None:intergenic | 30.0% | |
| !! | TCAACTTTTAGAGACAATGT+CGG | - | chr7_1:40393596-40393615 | Msa1019190:intron | 30.0% |
| AGAATCTCTTGTTGAATAGA+TGG | - | chr7_1:40393622-40393641 | Msa1019190:intron | 30.0% | |
| TCTACTCTACCTTTATCTAT+TGG | + | chr7_1:40393717-40393736 | None:intergenic | 30.0% | |
| !! | CCTTTTTAAAGGTTTTTCTC+TGG | + | chr7_1:40393740-40393759 | None:intergenic | 30.0% |
| ! | CCAGAGAAAAACCTTTAAAA+AGG | - | chr7_1:40393737-40393756 | Msa1019190:intron | 30.0% |
| !!! | ATATTGCTTTTTGTAGGTTG+AGG | - | chr7_1:40393866-40393885 | Msa1019190:intron | 30.0% |
| !!! | TATTGCTTTTTGTAGGTTGA+GGG | - | chr7_1:40393867-40393886 | Msa1019190:intron | 30.0% |
| TCAACTGAGCTCAAAATTAT+TGG | + | chr7_1:40394371-40394390 | None:intergenic | 30.0% | |
| ! | GGGAATTTTACTTTGTTGAT+TGG | + | chr7_1:40394627-40394646 | None:intergenic | 30.0% |
| TAAGCAAAGCATGTATCATT+GGG | + | chr7_1:40394649-40394668 | None:intergenic | 30.0% | |
| !!! | GACCTAATTTGGTTTTCTTA+TGG | - | chr7_1:40394805-40394824 | Msa1019190:intron | 30.0% |
| AAGAGGGATATATGTTCATT+TGG | + | chr7_1:40394921-40394940 | None:intergenic | 30.0% | |
| TCTAAAAGTTGGATCATTGA+AGG | + | chr7_1:40395143-40395162 | None:intergenic | 30.0% | |
| ! | ACACATACACTTCTAAAAGT+TGG | + | chr7_1:40395154-40395173 | None:intergenic | 30.0% |
| ! | TTCTTTTCTCCTTTTATCCA+AGG | - | chr7_1:40395316-40395335 | Msa1019190:CDS | 30.0% |
| CTTATGTCTTTCTATGCAAT+AGG | - | chr7_1:40395453-40395472 | Msa1019190:intron | 30.0% | |
| ATGTCTTTCTATGCAATATG+TGG | - | chr7_1:40395521-40395540 | Msa1019190:CDS | 30.0% | |
| TCATATTCAATTAGCAAGAC+AGG | + | chr7_1:40395820-40395839 | None:intergenic | 30.0% | |
| TTAACTCTGTAGTTGTATCT+TGG | + | chr7_1:40395897-40395916 | None:intergenic | 30.0% | |
| GAATATATGCAACTAAGTCT+TGG | - | chr7_1:40396320-40396339 | Msa1019190:intron | 30.0% | |
| GATAATAAAATTAACCAGCC+AGG | + | chr7_1:40396365-40396384 | None:intergenic | 30.0% | |
| ! | TGTTTTCATGCTCTTGATTT+TGG | - | chr7_1:40396566-40396585 | Msa1019190:intron | 30.0% |
| TTGAACGTGCTAATTCAATA+TGG | + | chr7_1:40396650-40396669 | None:intergenic | 30.0% | |
| ! | TTCTGCACATAATCTTTTGA+AGG | + | chr7_1:40396724-40396743 | None:intergenic | 30.0% |
| AGATTATGTGCAGAATATGA+AGG | - | chr7_1:40396729-40396748 | Msa1019190:intron | 30.0% | |
| AAAAACAGCATAGATGTTTG+AGG | + | chr7_1:40396798-40396817 | None:intergenic | 30.0% | |
| TAGCAAACAATTCAGCAAAT+GGG | + | chr7_1:40397282-40397301 | None:intergenic | 30.0% | |
| CCATTAGCACTTAAAAAGAT+TGG | + | chr7_1:40397409-40397428 | None:intergenic | 30.0% | |
| !!! | CCAATCTTTTTAAGTGCTAA+TGG | - | chr7_1:40397406-40397425 | Msa1019190:CDS | 30.0% |
| !!! | GAGTTTTTGTTTGACGGATT+CGG | + | chr7_1:40392297-40392316 | None:intergenic | 35.0% |
| GCATATGATATTTAAGGGGA+CGG | - | chr7_1:40392553-40392572 | Msa1019190:CDS | 35.0% | |
| GAAGAGGAGATTGAGAATAT+GGG | - | chr7_1:40392599-40392618 | Msa1019190:intron | 35.0% | |
| TATTATGCTAAGGTTTCGCA+AGG | - | chr7_1:40392662-40392681 | Msa1019190:intron | 35.0% | |
| ATTATGCTAAGGTTTCGCAA+GGG | - | chr7_1:40392663-40392682 | Msa1019190:intron | 35.0% | |
| GAGAAAGGGATGTTATTCTT+AGG | - | chr7_1:40392759-40392778 | Msa1019190:intron | 35.0% | |
| GGATGTTATTCTTAGGGAAA+TGG | - | chr7_1:40392766-40392785 | Msa1019190:intron | 35.0% | |
| TATTCTTAGGGAAATGGAAG+AGG | - | chr7_1:40392772-40392791 | Msa1019190:intron | 35.0% | |
| !!! | GCGATTTTTTTGTGGGATTT+TGG | - | chr7_1:40393053-40393072 | Msa1019190:intron | 35.0% |
| !!! | TGTTTGGATTGGCCTATTTT+GGG | - | chr7_1:40393078-40393097 | Msa1019190:intron | 35.0% |
| ACTCATTGAACACACAAAAC+AGG | + | chr7_1:40393265-40393284 | None:intergenic | 35.0% | |
| !! | GTACAGATTTTAAGAACTGC+CGG | - | chr7_1:40393387-40393406 | Msa1019190:intron | 35.0% |
| !! | TACAGATTTTAAGAACTGCC+GGG | - | chr7_1:40393388-40393407 | Msa1019190:intron | 35.0% |
| !! | AAGTTGTAGTATTGGCAGTT+AGG | - | chr7_1:40393500-40393519 | Msa1019190:intron | 35.0% |
| !! | AGTTGTAGTATTGGCAGTTA+GGG | - | chr7_1:40393501-40393520 | Msa1019190:intron | 35.0% |
| !! | CAACTTTTAGAGACAATGTC+GGG | - | chr7_1:40393597-40393616 | Msa1019190:intron | 35.0% |
| !! | AACTTTTAGAGACAATGTCG+GGG | - | chr7_1:40393598-40393617 | Msa1019190:intron | 35.0% |
| GTTGAATAGATGGTAGAATG+TGG | - | chr7_1:40393632-40393651 | Msa1019190:intron | 35.0% | |
| ! | GTTCTCATTCTTTTGCTGAA+AGG | - | chr7_1:40393831-40393850 | Msa1019190:intron | 35.0% |
| ! | ATTGTCTTAATGTTCTGAGC+AGG | + | chr7_1:40393972-40393991 | None:intergenic | 35.0% |
| GTTTATCTACATACCATCCT+AGG | + | chr7_1:40394041-40394060 | None:intergenic | 35.0% | |
| ! | AAGGAACCTGCAATTTTTAC+TGG | - | chr7_1:40394323-40394342 | Msa1019190:intron | 35.0% |
| TCAGAACCAGTAAAAATTGC+AGG | + | chr7_1:40394332-40394351 | None:intergenic | 35.0% | |
| !!! | TGCAATTTTTACTGGTTCTG+AGG | - | chr7_1:40394331-40394350 | Msa1019190:intron | 35.0% |
| ! | ACTCGTTTTGTAAACAGGTT+CGG | - | chr7_1:40394429-40394448 | Msa1019190:intron | 35.0% |
| TATTCCTCTTGCACAATTTG+CGG | - | chr7_1:40394466-40394485 | Msa1019190:intron | 35.0% | |
| TCCTGATTCAATTGCTTTGA+TGG | - | chr7_1:40394517-40394536 | Msa1019190:intron | 35.0% | |
| ACCATCAAAGCAATTGAATC+AGG | + | chr7_1:40394521-40394540 | None:intergenic | 35.0% | |
| AAGCAAAGCATGTATCATTG+GGG | + | chr7_1:40394648-40394667 | None:intergenic | 35.0% | |
| GTAAGCAAAGCATGTATCAT+TGG | + | chr7_1:40394650-40394669 | None:intergenic | 35.0% | |
| AGTAGAAGTCCTTGGATAAA+AGG | + | chr7_1:40395328-40395347 | None:intergenic | 35.0% | |
| GTGTCTTTCTTCACAATATG+CGG | - | chr7_1:40395390-40395409 | Msa1019190:intron | 35.0% | |
| ATGTCTTTCTATGCAATAGG+TGG | - | chr7_1:40395456-40395475 | Msa1019190:intron | 35.0% | |
| TCTTTCTATGCAATATGTGG+TGG | - | chr7_1:40395524-40395543 | Msa1019190:CDS | 35.0% | |
| AATGTATGAGACAACCAAGT+TGG | - | chr7_1:40395723-40395742 | Msa1019190:intron | 35.0% | |
| GTTTAGCATATTGCATCATC+TGG | - | chr7_1:40395937-40395956 | Msa1019190:CDS | 35.0% | |
| CATGGGTGAAATTTGAATCA+CGG | + | chr7_1:40396077-40396096 | None:intergenic | 35.0% | |
| ATGTCATATGCGTTCATCAT+GGG | + | chr7_1:40396094-40396113 | None:intergenic | 35.0% | |
| AATGTCATATGCGTTCATCA+TGG | + | chr7_1:40396095-40396114 | None:intergenic | 35.0% | |
| !! | CAACTGACATTTGTTGTCAT+TGG | - | chr7_1:40396177-40396196 | Msa1019190:intron | 35.0% |
| CAATAAGCTATGAATCAGGA+AGG | + | chr7_1:40396432-40396451 | None:intergenic | 35.0% | |
| ACAGCAATAAGCTATGAATC+AGG | + | chr7_1:40396436-40396455 | None:intergenic | 35.0% | |
| ! | ATGAATCCAGAGGTGTAAAA+TGG | - | chr7_1:40396460-40396479 | Msa1019190:intron | 35.0% |
| ! | TGAATCCAGAGGTGTAAAAT+GGG | - | chr7_1:40396461-40396480 | Msa1019190:intron | 35.0% |
| GTGCTAATTCAATATGGCAT+GGG | + | chr7_1:40396644-40396663 | None:intergenic | 35.0% | |
| GAACAATCCAATGAACTACT+AGG | + | chr7_1:40396759-40396778 | None:intergenic | 35.0% | |
| ! | TAGATGTTTGAGGAGTATGA+AGG | + | chr7_1:40396788-40396807 | None:intergenic | 35.0% |
| TTGTTTCAGCTACTCACATA+TGG | - | chr7_1:40397247-40397266 | Msa1019190:CDS | 35.0% | |
| CTAGCAAACAATTCAGCAAA+TGG | + | chr7_1:40397283-40397302 | None:intergenic | 35.0% | |
| TGCAACACGTTTAATTGTAC+TGG | + | chr7_1:40397323-40397342 | None:intergenic | 35.0% | |
| TAATCAGGTAAACGCTGAAT+AGG | + | chr7_1:40397478-40397497 | None:intergenic | 35.0% | |
| TGAAAAATGATGGCCTAAAC+AGG | + | chr7_1:40397628-40397647 | None:intergenic | 35.0% | |
| ! | GGAGAAACCAAGCAATTTTA+GGG | + | chr7_1:40397770-40397789 | None:intergenic | 35.0% |
| CCAAATGCACTAAATCAATG+AGG | + | chr7_1:40397832-40397851 | None:intergenic | 35.0% | |
| !! | CCTCATTGATTTAGTGCATT+TGG | - | chr7_1:40397829-40397848 | Msa1019190:five_prime_UTR | 35.0% |
| !! | GCGTTGGAGTTTTTGTTTGA+CGG | + | chr7_1:40392303-40392322 | None:intergenic | 40.0% |
| ! | GATCTGGATTTTCTAAGCGT+TGG | + | chr7_1:40392319-40392338 | None:intergenic | 40.0% |
| AATTTGAGGAAACGTGGATC+TGG | + | chr7_1:40392335-40392354 | None:intergenic | 40.0% | |
| GATCCACGTTTCCTCAAATT+CGG | - | chr7_1:40392335-40392354 | Msa1019190:CDS | 40.0% | |
| GTTTAGGTGAACCGAATTTG+AGG | + | chr7_1:40392349-40392368 | None:intergenic | 40.0% | |
| GGAAGAGGAGATTGAGAATA+TGG | - | chr7_1:40392598-40392617 | Msa1019190:intron | 40.0% | |
| AGGAGATTGAGAATATGGGT+GGG | - | chr7_1:40392603-40392622 | Msa1019190:intron | 40.0% | |
| TTATGCTAAGGTTTCGCAAG+GGG | - | chr7_1:40392664-40392683 | Msa1019190:intron | 40.0% | |
| !! | AGAATCGGATTAGTCGAGAA+AGG | - | chr7_1:40392744-40392763 | Msa1019190:intron | 40.0% |
| !! | GAATCGGATTAGTCGAGAAA+GGG | - | chr7_1:40392745-40392764 | Msa1019190:intron | 40.0% |
| !! | CATGTTTGTTGTGAGTGGTT+TGG | - | chr7_1:40392874-40392893 | Msa1019190:CDS | 40.0% |
| ! | TTGTTGTGAGTGGTTTGGAT+TGG | - | chr7_1:40392879-40392898 | Msa1019190:CDS | 40.0% |
| !!! | CTGTTTGGATTGGCCTATTT+TGG | - | chr7_1:40393077-40393096 | Msa1019190:intron | 40.0% |
| !! | AGCAAAGGGTTAGTTTGGAT+TGG | + | chr7_1:40393221-40393240 | None:intergenic | 40.0% |
| !! | TTCTCAGCAAAGGGTTAGTT+TGG | + | chr7_1:40393226-40393245 | None:intergenic | 40.0% |
| TGTCAGCTATTCTCAGCAAA+GGG | + | chr7_1:40393235-40393254 | None:intergenic | 40.0% | |
| !! | GTTGTAGTATTGGCAGTTAG+GGG | - | chr7_1:40393502-40393521 | Msa1019190:intron | 40.0% |
| AGATGGTAGAATGTGGAAAC+AGG | - | chr7_1:40393639-40393658 | Msa1019190:intron | 40.0% | |
| CAAAGATCACTTCCTCTGTT+TGG | + | chr7_1:40393893-40393912 | None:intergenic | 40.0% | |
| AATCACCAAAGCTCATCTAC+AGG | - | chr7_1:40393989-40394008 | Msa1019190:intron | 40.0% | |
| GTAATCCTGTAGATGAGCTT+TGG | + | chr7_1:40393997-40394016 | None:intergenic | 40.0% | |
| CTGATCATGTATAGTGTCCA+TGG | - | chr7_1:40394081-40394100 | Msa1019190:CDS | 40.0% | |
| ! | CTGATGTCTGTTTTCTGTGT+GGG | - | chr7_1:40394179-40394198 | Msa1019190:intron | 40.0% |
| AGCAACTCAGTTGGTTGAAA+AGG | - | chr7_1:40394304-40394323 | Msa1019190:intron | 40.0% | |
| CTGTTTACAAAACGAGTGGA+TGG | + | chr7_1:40394426-40394445 | None:intergenic | 40.0% | |
| ! | CATCCACTCGTTTTGTAAAC+AGG | - | chr7_1:40394424-40394443 | Msa1019190:intron | 40.0% |
| GAACCTGTTTACAAAACGAG+TGG | + | chr7_1:40394430-40394449 | None:intergenic | 40.0% | |
| ! | CAATTTGCGGTAGCTTTTGA+AGG | - | chr7_1:40394479-40394498 | Msa1019190:intron | 40.0% |
| !!! | TAGCTTTTGAAGGAGCATCT+TGG | - | chr7_1:40394489-40394508 | Msa1019190:intron | 40.0% |
| ! | TTTACTTTGTTGATTGGGGG+AGG | + | chr7_1:40394621-40394640 | None:intergenic | 40.0% |
| AGCAAAGCATGTATCATTGG+GGG | + | chr7_1:40394647-40394666 | None:intergenic | 40.0% | |
| ! | TGAAGTTGCAGAAAGCATGA+TGG | - | chr7_1:40394722-40394741 | Msa1019190:intron | 40.0% |
| GGCTTTCAACACCAATTACA+AGG | - | chr7_1:40394743-40394762 | Msa1019190:intron | 40.0% | |
| CAACACCAATTACAAGGACA+CGG | - | chr7_1:40394749-40394768 | Msa1019190:intron | 40.0% | |
| AACACCAATTACAAGGACAC+GGG | - | chr7_1:40394750-40394769 | Msa1019190:intron | 40.0% | |
| CGCTAAGGTAAGACCTAATT+TGG | - | chr7_1:40394794-40394813 | Msa1019190:intron | 40.0% | |
| ACATTCCATGTCTTCCTCTT+GGG | + | chr7_1:40394889-40394908 | None:intergenic | 40.0% | |
| TCTTTCTTCACAATATGCGG+TGG | - | chr7_1:40395393-40395412 | Msa1019190:intron | 40.0% | |
| TCTTTCTATGCAATAGGTGG+TGG | - | chr7_1:40395459-40395478 | Msa1019190:intron | 40.0% | |
| !! | TAATTTGTTGTGCTCTCAGC+CGG | - | chr7_1:40395672-40395691 | Msa1019190:intron | 40.0% |
| TGAAACCTGATAAGCCAACT+TGG | + | chr7_1:40395740-40395759 | None:intergenic | 40.0% | |
| GTTCGTCAAAATACAGTTGC+AGG | + | chr7_1:40395975-40395994 | None:intergenic | 40.0% | |
| TGCTGTGTTAATGAATCCAG+AGG | - | chr7_1:40396450-40396469 | Msa1019190:intron | 40.0% | |
| ! | ACATTCCCATTTTACACCTC+TGG | + | chr7_1:40396469-40396488 | None:intergenic | 40.0% |
| CGTGCTAATTCAATATGGCA+TGG | + | chr7_1:40396645-40396664 | None:intergenic | 40.0% | |
| AGGTATGCCTAGTAGTTCAT+TGG | - | chr7_1:40396749-40396768 | Msa1019190:intron | 40.0% | |
| TACGTGAGATGTAAGGTCTA+TGG | + | chr7_1:40397010-40397029 | None:intergenic | 40.0% | |
| AATGCACTACGTGAGATGTA+AGG | + | chr7_1:40397017-40397036 | None:intergenic | 40.0% | |
| TCATTTCATGTCTGTCTTGC+AGG | - | chr7_1:40397429-40397448 | Msa1019190:CDS | 40.0% | |
| AGCGTTTACCTGATTACAAC+TGG | - | chr7_1:40397482-40397501 | Msa1019190:CDS | 40.0% | |
| ATGTACTCCATATATGCCTC+TGG | - | chr7_1:40397598-40397617 | Msa1019190:CDS | 40.0% | |
| GCTGTTGTCAGTGATGTAAA+TGG | - | chr7_1:40397697-40397716 | Msa1019190:CDS | 40.0% | |
| TGCATTGCCCTAAAATTGCT+TGG | - | chr7_1:40397760-40397779 | Msa1019190:five_prime_UTR | 40.0% | |
| ! | GGGAGAAACCAAGCAATTTT+AGG | + | chr7_1:40397771-40397790 | None:intergenic | 40.0% |
| !! | GAGTTTGTTGATCGTCATGG+TGG | + | chr7_1:40392117-40392136 | None:intergenic | 45.0% |
| !! | GAGGAGTTTGTTGATCGTCA+TGG | + | chr7_1:40392120-40392139 | None:intergenic | 45.0% |
| GATCGGATTGATGTGAGGAT+GGG | + | chr7_1:40392173-40392192 | None:intergenic | 45.0% | |
| CGATCGTAGATCATGACGTT+CGG | + | chr7_1:40392269-40392288 | None:intergenic | 45.0% | |
| GAACCGAATTTGAGGAAACG+TGG | + | chr7_1:40392341-40392360 | None:intergenic | 45.0% | |
| AGAGTTGTGATGCGAGTTTC+AGG | + | chr7_1:40392407-40392426 | None:intergenic | 45.0% | |
| ! | TTTGAGACGGAGGAGAGTAA+TGG | - | chr7_1:40392512-40392531 | Msa1019190:CDS | 45.0% |
| TGATATTTAAGGGGACGGAG+AGG | - | chr7_1:40392558-40392577 | Msa1019190:CDS | 45.0% | |
| GAGGAGATTGAGAATATGGG+TGG | - | chr7_1:40392602-40392621 | Msa1019190:intron | 45.0% | |
| ! | GCCTGTTGCGTTGGATATTT+TGG | - | chr7_1:40392691-40392710 | Msa1019190:intron | 45.0% |
| GCCAAAATATCCAACGCAAC+AGG | + | chr7_1:40392695-40392714 | None:intergenic | 45.0% | |
| ! | TTGTGGGATTTTGGGCTGTT+TGG | - | chr7_1:40393062-40393081 | Msa1019190:intron | 45.0% |
| ! | GGATTTTGGGCTGTTTGGAT+TGG | - | chr7_1:40393067-40393086 | Msa1019190:intron | 45.0% |
| CTGTCAGCTATTCTCAGCAA+AGG | + | chr7_1:40393236-40393255 | None:intergenic | 45.0% | |
| CTTTGCTGAGAATAGCTGAC+AGG | - | chr7_1:40393234-40393253 | Msa1019190:intron | 45.0% | |
| ! | TCCCAAAATGGTTCTGCCAA+GGG | + | chr7_1:40393949-40393968 | None:intergenic | 45.0% |
| AGACACATTACACTGCTCCT+AGG | - | chr7_1:40394021-40394040 | Msa1019190:intron | 45.0% | |
| ACATTACACTGCTCCTAGGA+TGG | - | chr7_1:40394025-40394044 | Msa1019190:intron | 45.0% | |
| AAGAACGAGCTTCAGAACCA+TGG | + | chr7_1:40394101-40394120 | None:intergenic | 45.0% | |
| CCACACAGAAAACAGACATC+AGG | + | chr7_1:40394181-40394200 | None:intergenic | 45.0% | |
| ! | CCTGATGTCTGTTTTCTGTG+TGG | - | chr7_1:40394178-40394197 | Msa1019190:intron | 45.0% |
| TTCAAGGTGATAGCTGCATC+TGG | - | chr7_1:40394209-40394228 | Msa1019190:intron | 45.0% | |
| !! | GGTGGGATTTGTTGACAACT+TGG | + | chr7_1:40394282-40394301 | None:intergenic | 45.0% |
| TTCAACCAACTGAGTTGCTG+TGG | + | chr7_1:40394303-40394322 | None:intergenic | 45.0% | |
| ATGGTCATGCAAGCAATGCT+GGG | - | chr7_1:40394536-40394555 | Msa1019190:intron | 45.0% | |
| GGTTCTTGGAATAAGACAGC+AGG | - | chr7_1:40394557-40394576 | Msa1019190:intron | 45.0% | |
| TCTTGGAATAAGACAGCAGG+AGG | - | chr7_1:40394560-40394579 | Msa1019190:intron | 45.0% | |
| CTTGGAATAAGACAGCAGGA+GGG | - | chr7_1:40394561-40394580 | Msa1019190:intron | 45.0% | |
| TTGGAATAAGACAGCAGGAG+GGG | - | chr7_1:40394562-40394581 | Msa1019190:intron | 45.0% | |
| AAGACCCGTGTCCTTGTAAT+TGG | + | chr7_1:40394757-40394776 | None:intergenic | 45.0% | |
| ! | TACAAGGACACGGGTCTTTT+TGG | - | chr7_1:40394759-40394778 | Msa1019190:intron | 45.0% |
| TGGTGTTTATGCTGTCGCTA+AGG | - | chr7_1:40394779-40394798 | Msa1019190:intron | 45.0% | |
| GACATTCCATGTCTTCCTCT+TGG | + | chr7_1:40394890-40394909 | None:intergenic | 45.0% | |
| ! | GACAACCAAGTTGGCTTATC+AGG | - | chr7_1:40395732-40395751 | Msa1019190:intron | 45.0% |
| ! | GTTGGCTTATCAGGTTTCAG+AGG | - | chr7_1:40395741-40395760 | Msa1019190:intron | 45.0% |
| TAGTGATCACGTTTGTGACC+TGG | - | chr7_1:40396344-40396363 | Msa1019190:intron | 45.0% | |
| TCGCTTCTGCTTCACATTGA+TGG | - | chr7_1:40396947-40396966 | Msa1019190:intron | 45.0% | |
| ! | GATGTTGCTATTGCTGCCAT+GGG | - | chr7_1:40397451-40397470 | Msa1019190:CDS | 45.0% |
| TAAACGCTGAATAGGTCCCA+TGG | + | chr7_1:40397470-40397489 | None:intergenic | 45.0% | |
| CGTCTGAACCAGTTGTAATC+AGG | + | chr7_1:40397493-40397512 | None:intergenic | 45.0% | |
| GAACTAATAGCGGTTCCAGT+AGG | + | chr7_1:40397521-40397540 | None:intergenic | 45.0% | |
| ACTCCATATATGCCTCTGGA+TGG | - | chr7_1:40397602-40397621 | Msa1019190:CDS | 45.0% | |
| TCAAAAGAGACCAGAAGCCA+GGG | + | chr7_1:40397802-40397821 | None:intergenic | 45.0% | |
| !!! | TTTCTTTTAATATATAAATA+TGG | - | chr7_1:40394148-40394167 | Msa1019190:intron | 5.0% |
| !! | TGTGGCTAGGGTTTGGTTTG+GGG | + | chr7_1:40392079-40392098 | None:intergenic | 50.0% |
| ! | GTGTGGCTAGGGTTTGGTTT+GGG | + | chr7_1:40392080-40392099 | None:intergenic | 50.0% |
| ! | TGTGTGGCTAGGGTTTGGTT+TGG | + | chr7_1:40392081-40392100 | None:intergenic | 50.0% |
| AACCAAACCCTAGCCACACA+CGG | - | chr7_1:40392081-40392100 | Msa1019190:three_prime_UTR | 50.0% | |
| ! | GTTGATCGTCATGGTGGAGA+GGG | + | chr7_1:40392111-40392130 | None:intergenic | 50.0% |
| ! | TGTTGATCGTCATGGTGGAG+AGG | + | chr7_1:40392112-40392131 | None:intergenic | 50.0% |
| GGATCGGATTGATGTGAGGA+TGG | + | chr7_1:40392174-40392193 | None:intergenic | 50.0% | |
| TAGATCATGACGTTCGGAGG+TGG | + | chr7_1:40392263-40392282 | None:intergenic | 50.0% | |
| TCGTAGATCATGACGTTCGG+AGG | + | chr7_1:40392266-40392285 | None:intergenic | 50.0% | |
| !! | TGGTCACGGATTTCGGGTTT+AGG | + | chr7_1:40392365-40392384 | None:intergenic | 50.0% |
| TCGTGTGTGGTCACGGATTT+CGG | + | chr7_1:40392372-40392391 | None:intergenic | 50.0% | |
| AGAGGATTCGTGTGTGGTCA+CGG | + | chr7_1:40392379-40392398 | None:intergenic | 50.0% | |
| TGTGATGCGAGTTTCAGGAG+CGG | + | chr7_1:40392402-40392421 | None:intergenic | 50.0% | |
| CGCATCACAACTCTCCCTAA+CGG | - | chr7_1:40392413-40392432 | Msa1019190:intron | 50.0% | |
| !! | TGCCGGTTCGAGATTTGAGA+CGG | - | chr7_1:40392499-40392518 | Msa1019190:CDS | 50.0% |
| CTCCGTCTCAAATCTCGAAC+CGG | + | chr7_1:40392504-40392523 | None:intergenic | 50.0% | |
| TATTTAAGGGGACGGAGAGG+AGG | - | chr7_1:40392561-40392580 | Msa1019190:CDS | 50.0% | |
| GAATGCGAGGGATTTGGAAG+AGG | - | chr7_1:40392583-40392602 | Msa1019190:intron | 50.0% | |
| TGAGAGCAACTCTACTGACC+CGG | + | chr7_1:40393409-40393428 | None:intergenic | 50.0% | |
| GTCAGTAGAGTTGCTCTCAC+AGG | - | chr7_1:40393410-40393429 | Msa1019190:intron | 50.0% | |
| GTAGAGTTGCTCTCACAGGT+CGG | - | chr7_1:40393414-40393433 | Msa1019190:intron | 50.0% | |
| TCGGTGGGTCAGTTGTTACT+GGG | + | chr7_1:40393545-40393564 | None:intergenic | 50.0% | |
| ATCGGTGGGTCAGTTGTTAC+TGG | + | chr7_1:40393546-40393565 | None:intergenic | 50.0% | |
| ! | AAGGGGAGTGTACTGGAAAG+CGG | + | chr7_1:40393931-40393950 | None:intergenic | 50.0% |
| ! | TCCCCTTGGCAGAACCATTT+TGG | - | chr7_1:40393944-40393963 | Msa1019190:intron | 50.0% |
| ! | CCCAAAATGGTTCTGCCAAG+GGG | + | chr7_1:40393948-40393967 | None:intergenic | 50.0% |
| ! | CCCCTTGGCAGAACCATTTT+GGG | - | chr7_1:40393945-40393964 | Msa1019190:intron | 50.0% |
| ! | GTCCCAAAATGGTTCTGCCA+AGG | + | chr7_1:40393950-40393969 | None:intergenic | 50.0% |
| ! | GTTCTGAGCAGGTCCCAAAA+TGG | + | chr7_1:40393961-40393980 | None:intergenic | 50.0% |
| !! | CTGTGTGGGTCTGCTTTTCA+AGG | - | chr7_1:40394193-40394212 | Msa1019190:intron | 50.0% |
| ACCAACTGAGTTGCTGTGGT+GGG | + | chr7_1:40394299-40394318 | None:intergenic | 50.0% | |
| AACCAACTGAGTTGCTGTGG+TGG | + | chr7_1:40394300-40394319 | None:intergenic | 50.0% | |
| GCTACCGCAAATTGTGCAAG+AGG | + | chr7_1:40394473-40394492 | None:intergenic | 50.0% | |
| GATGGTCATGCAAGCAATGC+TGG | - | chr7_1:40394535-40394554 | Msa1019190:intron | 50.0% | |
| TGCAAGCAATGCTGGGTTCT+TGG | - | chr7_1:40394543-40394562 | Msa1019190:intron | 50.0% | |
| TGGAATAAGACAGCAGGAGG+GGG | - | chr7_1:40394563-40394582 | Msa1019190:intron | 50.0% | |
| AGCAGGAGGGGGAAAACATA+TGG | - | chr7_1:40394574-40394593 | Msa1019190:intron | 50.0% | |
| GCAGGAGGGGGAAAACATAT+GGG | - | chr7_1:40394575-40394594 | Msa1019190:intron | 50.0% | |
| CAGGAGGGGGAAAACATATG+GGG | - | chr7_1:40394576-40394595 | Msa1019190:intron | 50.0% | |
| GCAAACCCAAGAGGAAGACA+TGG | - | chr7_1:40394881-40394900 | Msa1019190:intron | 50.0% | |
| GACAGATCATCCAAGCAGTC+CGG | + | chr7_1:40395694-40395713 | None:intergenic | 50.0% | |
| ! | GGATGTTGCTATTGCTGCCA+TGG | - | chr7_1:40397450-40397469 | Msa1019190:CDS | 50.0% |
| ! | AGGCCATCCAGAGGCATATA+TGG | + | chr7_1:40397608-40397627 | None:intergenic | 50.0% |
| CTCAAAAGAGACCAGAAGCC+AGG | + | chr7_1:40397803-40397822 | None:intergenic | 50.0% | |
| ! | CTGGCTTCTGGTCTCTTTTG+AGG | - | chr7_1:40397801-40397820 | Msa1019190:five_prime_UTR | 50.0% |
| ACCAAACCCTAGCCACACAC+GGG | - | chr7_1:40392082-40392101 | Msa1019190:three_prime_UTR | 55.0% | |
| ! | TGGCGGATCGGATTGATGTG+AGG | + | chr7_1:40392178-40392197 | None:intergenic | 55.0% |
| TCATGACGTTCGGAGGTGGT+GGG | + | chr7_1:40392259-40392278 | None:intergenic | 55.0% | |
| ATCATGACGTTCGGAGGTGG+TGG | + | chr7_1:40392260-40392279 | None:intergenic | 55.0% | |
| CGTGTGTGGTCACGGATTTC+GGG | + | chr7_1:40392371-40392390 | None:intergenic | 55.0% | |
| TGAGCTAAGGCTAGACTCCG+TGG | + | chr7_1:40392450-40392469 | None:intergenic | 55.0% | |
| !! | CGGAGTCTAGCCTTAGCTCA+AGG | - | chr7_1:40392450-40392469 | Msa1019190:intron | 55.0% |
| CGGTAGCAGTCCTTGAGCTA+AGG | + | chr7_1:40392463-40392482 | None:intergenic | 55.0% | |
| AGCTCAAGGACTGCTACCGT+TGG | - | chr7_1:40392464-40392483 | Msa1019190:intron | 55.0% | |
| GCTCAAGGACTGCTACCGTT+GGG | - | chr7_1:40392465-40392484 | Msa1019190:intron | 55.0% | |
| CTCAAGGACTGCTACCGTTG+GGG | - | chr7_1:40392466-40392485 | Msa1019190:intron | 55.0% | |
| !! | GGCATCGATCCAAACCCCAA+CGG | + | chr7_1:40392483-40392502 | None:intergenic | 55.0% |
| GTTGGGGTTTGGATCGATGC+CGG | - | chr7_1:40392482-40392501 | Msa1019190:intron | 55.0% | |
| ! | CGGTTCGAGATTTGAGACGG+AGG | - | chr7_1:40392502-40392521 | Msa1019190:CDS | 55.0% |
| GAGGAGGAATGCGAGGGATT+TGG | - | chr7_1:40392577-40392596 | Msa1019190:intron | 55.0% | |
| GGTGGGTCAGTTGTTACTGG+GGG | + | chr7_1:40393543-40393562 | None:intergenic | 55.0% | |
| CGGTGGGTCAGTTGTTACTG+GGG | + | chr7_1:40393544-40393563 | None:intergenic | 55.0% | |
| ! | GTAGGTTGAGGGCCAAACAG+AGG | - | chr7_1:40393878-40393897 | Msa1019190:intron | 55.0% |
| ACTGGAAAGCGGTTGCGTGT+AGG | + | chr7_1:40393920-40393939 | None:intergenic | 55.0% | |
| GCTTTCCAGTACACTCCCCT+TGG | - | chr7_1:40393930-40393949 | Msa1019190:intron | 55.0% | |
| ! | TTCTGCCAAGGGGAGTGTAC+TGG | + | chr7_1:40393938-40393957 | None:intergenic | 55.0% |
| TCCCACCACAGCAACTCAGT+TGG | - | chr7_1:40394295-40394314 | Msa1019190:intron | 55.0% | |
| TCTGAGCTAGCACAGCGAGT+TGG | - | chr7_1:40394693-40394712 | Msa1019190:intron | 55.0% | |
| AGCTCGCATGCAAACCCAAG+AGG | - | chr7_1:40394872-40394891 | Msa1019190:intron | 55.0% | |
| TGTTACGCGTGCTCGCAATC+AGG | - | chr7_1:40395768-40395787 | Msa1019190:intron | 55.0% | |
| GATCACGTTTGTGACCTGGC+TGG | - | chr7_1:40396348-40396367 | Msa1019190:intron | 55.0% | |
| GGTTCAGACGCAGAACCTAC+TGG | - | chr7_1:40397503-40397522 | Msa1019190:CDS | 55.0% | |
| TGCCTCTGGATGGCCTGTTT+AGG | - | chr7_1:40397612-40397631 | Msa1019190:CDS | 55.0% | |
| AAGAGACCAGAAGCCAGGGT+GGG | + | chr7_1:40397798-40397817 | None:intergenic | 55.0% | |
| AAAGAGACCAGAAGCCAGGG+TGG | + | chr7_1:40397799-40397818 | None:intergenic | 55.0% | |
| !! | ATGAACGGCGGACTAGGGTG+AGG | + | chr7_1:40392139-40392158 | None:intergenic | 60.0% |
| ATGTGAGGATGGGTGTCCGC+CGG | + | chr7_1:40392163-40392182 | None:intergenic | 60.0% | |
| !! | AGGTGGAGAGAGTGGCGGAT+CGG | + | chr7_1:40392190-40392209 | None:intergenic | 60.0% |
| CATGACGTTCGGAGGTGGTG+GGG | + | chr7_1:40392258-40392277 | None:intergenic | 60.0% | |
| GAGCGGAGAGGATTCGTGTG+TGG | + | chr7_1:40392385-40392404 | None:intergenic | 60.0% | |
| TGCGAGTTTCAGGAGCGGAG+AGG | + | chr7_1:40392397-40392416 | None:intergenic | 60.0% | |
| TGGCGACACGGAGTCCGTTA+GGG | + | chr7_1:40392430-40392449 | None:intergenic | 60.0% | |
| !! | TAACGGACTCCGTGTCGCCA+CGG | - | chr7_1:40392430-40392449 | Msa1019190:intron | 60.0% |
| GGACTGCTACCGTTGGGGTT+TGG | - | chr7_1:40392471-40392490 | Msa1019190:intron | 60.0% | |
| GACGGAGAGGAGGAATGCGA+GGG | - | chr7_1:40392571-40392590 | Msa1019190:CDS | 60.0% | |
| AGGGGATGTGCCTGTTGCGT+TGG | - | chr7_1:40392682-40392701 | Msa1019190:intron | 60.0% | |
| GGGTCAGTTGTTACTGGGGG+TGG | + | chr7_1:40393540-40393559 | None:intergenic | 60.0% | |
| GGAAAGCGGTTGCGTGTAGG+TGG | + | chr7_1:40393917-40393936 | None:intergenic | 60.0% | |
| ACGCGTGCTCGCAATCAGGT+AGG | - | chr7_1:40395772-40395791 | Msa1019190:intron | 60.0% | |
| GGCCTAAACAGGCCATCCAG+AGG | + | chr7_1:40397617-40397636 | None:intergenic | 60.0% | |
| AGAGACCAGAAGCCAGGGTG+GGG | + | chr7_1:40397797-40397816 | None:intergenic | 60.0% | |
| GCCCGTGTGTGGCTAGGGTT+TGG | + | chr7_1:40392086-40392105 | None:intergenic | 65.0% | |
| !! | CCGGGATGAACGGCGGACTA+GGG | + | chr7_1:40392144-40392163 | None:intergenic | 65.0% |
| CCCTAGTCCGCCGTTCATCC+CGG | - | chr7_1:40392141-40392160 | Msa1019190:three_prime_UTR | 65.0% | |
| TAGTCCGCCGTTCATCCCGG+CGG | - | chr7_1:40392144-40392163 | Msa1019190:three_prime_UTR | 65.0% | |
| TGGGTGTCCGCCGGGATGAA+CGG | + | chr7_1:40392154-40392173 | None:intergenic | 65.0% | |
| TGTGAGGATGGGTGTCCGCC+GGG | + | chr7_1:40392162-40392181 | None:intergenic | 65.0% | |
| AGCGGAGGTGGAGAGAGTGG+CGG | + | chr7_1:40392195-40392214 | None:intergenic | 65.0% | |
| TGAAGGGGGTGAGCGGGTGA+CGG | + | chr7_1:40392225-40392244 | None:intergenic | 65.0% | |
| TGGGGAAGGGGGTGGTGAAG+GGG | + | chr7_1:40392240-40392259 | None:intergenic | 65.0% | |
| GTGGGGAAGGGGGTGGTGAA+GGG | + | chr7_1:40392241-40392260 | None:intergenic | 65.0% | |
| !! | TTCGGAGGTGGTGGGGAAGG+GGG | + | chr7_1:40392251-40392270 | None:intergenic | 65.0% |
| !! | GTTCGGAGGTGGTGGGGAAG+GGG | + | chr7_1:40392252-40392271 | None:intergenic | 65.0% |
| !! | CGTTCGGAGGTGGTGGGGAA+GGG | + | chr7_1:40392253-40392272 | None:intergenic | 65.0% |
| !! | ACGTTCGGAGGTGGTGGGGA+AGG | + | chr7_1:40392254-40392273 | None:intergenic | 65.0% |
| GTGGCGACACGGAGTCCGTT+AGG | + | chr7_1:40392431-40392450 | None:intergenic | 65.0% | |
| GGCTAGACTCCGTGGCGACA+CGG | + | chr7_1:40392442-40392461 | None:intergenic | 65.0% | |
| GGACGGAGAGGAGGAATGCG+AGG | - | chr7_1:40392570-40392589 | Msa1019190:CDS | 65.0% | |
| GTGCTCTCAGCCGGACTGCT+TGG | - | chr7_1:40395681-40395700 | Msa1019190:intron | 65.0% | |
| GTTTCTCCCGAACCCCACCC+TGG | - | chr7_1:40397782-40397801 | Msa1019190:five_prime_UTR | 65.0% | |
| CAGAAGCCAGGGTGGGGTTC+GGG | + | chr7_1:40397791-40397810 | None:intergenic | 65.0% | |
| CCAGAAGCCAGGGTGGGGTT+CGG | + | chr7_1:40397792-40397811 | None:intergenic | 65.0% | |
| GGGCTGCCCGTGTGTGGCTA+GGG | + | chr7_1:40392091-40392110 | None:intergenic | 70.0% | |
| AGGGCTGCCCGTGTGTGGCT+AGG | + | chr7_1:40392092-40392111 | None:intergenic | 70.0% | |
| TGGAGAGGGCTGCCCGTGTG+TGG | + | chr7_1:40392097-40392116 | None:intergenic | 70.0% | |
| ! | GCCGGGATGAACGGCGGACT+AGG | + | chr7_1:40392145-40392164 | None:intergenic | 70.0% |
| GTGTCCGCCGGGATGAACGG+CGG | + | chr7_1:40392151-40392170 | None:intergenic | 70.0% | |
| GGCAGCGGAGGTGGAGAGAG+TGG | + | chr7_1:40392198-40392217 | None:intergenic | 70.0% | |
| AAGGGGGTGAGCGGGTGACG+GGG | + | chr7_1:40392223-40392242 | None:intergenic | 70.0% | |
| GAAGGGGGTGAGCGGGTGAC+GGG | + | chr7_1:40392224-40392243 | None:intergenic | 70.0% | |
| GGGTGGTGAAGGGGGTGAGC+GGG | + | chr7_1:40392231-40392250 | None:intergenic | 70.0% | |
| GGGGTGGTGAAGGGGGTGAG+CGG | + | chr7_1:40392232-40392251 | None:intergenic | 70.0% | |
| GGGGAAGGGGGTGGTGAAGG+GGG | + | chr7_1:40392239-40392258 | None:intergenic | 70.0% | |
| GGTGGGGAAGGGGGTGGTGA+AGG | + | chr7_1:40392242-40392261 | None:intergenic | 70.0% | |
| CCGAACCCCACCCTGGCTTC+TGG | - | chr7_1:40397789-40397808 | Msa1019190:five_prime_UTR | 70.0% | |
| ! | AGGGGGTGAGCGGGTGACGG+GGG | + | chr7_1:40392222-40392241 | None:intergenic | 75.0% |
| !! | GGAGGTGGTGGGGAAGGGGG+TGG | + | chr7_1:40392248-40392267 | None:intergenic | 75.0% |
| !!! | GGGTGAGCGGGTGACGGGGG+CGG | + | chr7_1:40392219-40392238 | None:intergenic | 80.0% |
| ! | GACGGGGGCGGCAGCGGAGG+TGG | + | chr7_1:40392207-40392226 | None:intergenic | 85.0% |
| !!! | GGTGACGGGGGCGGCAGCGG+AGG | + | chr7_1:40392210-40392229 | None:intergenic | 85.0% |
| !!! | GCGGGTGACGGGGGCGGCAG+CGG | + | chr7_1:40392213-40392232 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 40391987 | 40397861 | 40391987 | ID=Msa1019190;Name=Msa1019190 |
| chr7_1 | mRNA | 40391987 | 40397861 | 40391987 | ID=Msa1019190-mRNA-1;Parent=Msa1019190;Name=Msa1019190-mRNA-1;_AED=0.05;_eAED=0.05;_QI=132|1|1|1|1|1|9|324|532 |
| chr7_1 | exon | 40391987 | 40392397 | 40391987 | ID=Msa1019190-mRNA-1:exon:7862;Parent=Msa1019190-mRNA-1 |
| chr7_1 | exon | 40392485 | 40392592 | 40392485 | ID=Msa1019190-mRNA-1:exon:7861;Parent=Msa1019190-mRNA-1 |
| chr7_1 | exon | 40392845 | 40392910 | 40392845 | ID=Msa1019190-mRNA-1:exon:7860;Parent=Msa1019190-mRNA-1 |
| chr7_1 | exon | 40394059 | 40394157 | 40394059 | ID=Msa1019190-mRNA-1:exon:7859;Parent=Msa1019190-mRNA-1 |
| chr7_1 | exon | 40395048 | 40395156 | 40395048 | ID=Msa1019190-mRNA-1:exon:7858;Parent=Msa1019190-mRNA-1 |
| chr7_1 | exon | 40395251 | 40395402 | 40395251 | ID=Msa1019190-mRNA-1:exon:7857;Parent=Msa1019190-mRNA-1 |
| chr7_1 | exon | 40395496 | 40395633 | 40395496 | ID=Msa1019190-mRNA-1:exon:7856;Parent=Msa1019190-mRNA-1 |
| chr7_1 | exon | 40395802 | 40395966 | 40395802 | ID=Msa1019190-mRNA-1:exon:7855;Parent=Msa1019190-mRNA-1 |
| chr7_1 | exon | 40397055 | 40397861 | 40397055 | ID=Msa1019190-mRNA-1:exon:7854;Parent=Msa1019190-mRNA-1 |
| chr7_1 | five_prime_UTR | 40397730 | 40397861 | 40397730 | ID=Msa1019190-mRNA-1:five_prime_utr;Parent=Msa1019190-mRNA-1 |
| chr7_1 | CDS | 40397055 | 40397729 | 40397055 | ID=Msa1019190-mRNA-1:cds;Parent=Msa1019190-mRNA-1 |
| chr7_1 | CDS | 40395802 | 40395966 | 40395802 | ID=Msa1019190-mRNA-1:cds;Parent=Msa1019190-mRNA-1 |
| chr7_1 | CDS | 40395496 | 40395633 | 40395496 | ID=Msa1019190-mRNA-1:cds;Parent=Msa1019190-mRNA-1 |
| chr7_1 | CDS | 40395251 | 40395402 | 40395251 | ID=Msa1019190-mRNA-1:cds;Parent=Msa1019190-mRNA-1 |
| chr7_1 | CDS | 40395048 | 40395156 | 40395048 | ID=Msa1019190-mRNA-1:cds;Parent=Msa1019190-mRNA-1 |
| chr7_1 | CDS | 40394059 | 40394157 | 40394059 | ID=Msa1019190-mRNA-1:cds;Parent=Msa1019190-mRNA-1 |
| chr7_1 | CDS | 40392845 | 40392910 | 40392845 | ID=Msa1019190-mRNA-1:cds;Parent=Msa1019190-mRNA-1 |
| chr7_1 | CDS | 40392485 | 40392592 | 40392485 | ID=Msa1019190-mRNA-1:cds;Parent=Msa1019190-mRNA-1 |
| chr7_1 | CDS | 40392311 | 40392397 | 40392311 | ID=Msa1019190-mRNA-1:cds;Parent=Msa1019190-mRNA-1 |
| chr7_1 | three_prime_UTR | 40391987 | 40392310 | 40391987 | ID=Msa1019190-mRNA-1:three_prime_utr;Parent=Msa1019190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
