Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1142810 | XP_003621817.2 | 95.362 | 539 | 25 | 0 | 26 | 564 | 2 | 540 | 0.0 | 1037 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1142810 | G7KVR8 | 95.362 | 539 | 25 | 0 | 26 | 564 | 2 | 540 | 0.0 | 1037 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0765910 | Msa1142810 | 0.823353 | 1.449745e-53 | -8.615850e-47 |
| Msa0806790 | Msa1142810 | 0.838612 | 2.593287e-57 | -8.615850e-47 |
| Msa1011370 | Msa1142810 | 0.896791 | 2.626621e-76 | -8.615850e-47 |
| Msa1053040 | Msa1142810 | 0.941507 | 3.687200e-101 | -8.615850e-47 |
| Msa0966400 | Msa1142810 | 0.826836 | 2.180425e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1142810 | MtrunA17_Chr7g0222931 | 95.362 | 539 | 25 | 0 | 26 | 564 | 2 | 540 | 0.0 | 1037 |
| Msa1142810 | MtrunA17_Chr1g0182221 | 37.251 | 553 | 306 | 10 | 26 | 559 | 2 | 532 | 8.98e-108 | 333 |
| Msa1142810 | MtrunA17_Chr4g0030901 | 36.949 | 544 | 240 | 12 | 26 | 561 | 2 | 450 | 1.74e-103 | 319 |
| Msa1142810 | MtrunA17_Chr1g0182481 | 48.485 | 132 | 68 | 0 | 414 | 545 | 240 | 371 | 1.21e-34 | 139 |
| Msa1142810 | MtrunA17_Chr2g0320451 | 40.708 | 113 | 62 | 1 | 424 | 531 | 222 | 334 | 1.13e-18 | 90.1 |
| Msa1142810 | MtrunA17_Chr2g0320431 | 38.053 | 113 | 65 | 1 | 424 | 531 | 19 | 131 | 9.84e-18 | 83.6 |
| Msa1142810 | MtrunA17_Chr7g0265211 | 31.081 | 148 | 97 | 4 | 410 | 552 | 228 | 375 | 6.54e-16 | 81.3 |
| Msa1142810 | MtrunA17_Chr1g0179841 | 31.496 | 127 | 82 | 2 | 431 | 552 | 98 | 224 | 8.05e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1142810 | AT5G13660.1 | 37.455 | 550 | 283 | 14 | 44 | 562 | 13 | 532 | 6.73e-99 | 310 |
| Msa1142810 | AT5G13660.2 | 37.387 | 551 | 283 | 15 | 44 | 562 | 13 | 533 | 4.90e-97 | 306 |
| Msa1142810 | AT5G59830.3 | 54.450 | 191 | 73 | 3 | 371 | 561 | 246 | 422 | 2.49e-65 | 219 |
| Msa1142810 | AT5G59830.3 | 31.875 | 160 | 107 | 2 | 26 | 184 | 2 | 160 | 4.43e-15 | 78.2 |
| Msa1142810 | AT5G59830.1 | 54.450 | 191 | 73 | 3 | 371 | 561 | 246 | 422 | 2.49e-65 | 219 |
| Msa1142810 | AT5G59830.1 | 31.875 | 160 | 107 | 2 | 26 | 184 | 2 | 160 | 4.43e-15 | 78.2 |
| Msa1142810 | AT5G59830.2 | 54.450 | 191 | 73 | 3 | 371 | 561 | 246 | 422 | 2.49e-65 | 219 |
| Msa1142810 | AT5G59830.2 | 31.875 | 160 | 107 | 2 | 26 | 184 | 2 | 160 | 4.43e-15 | 78.2 |
| Msa1142810 | AT5G13660.6 | 31.197 | 468 | 261 | 14 | 44 | 480 | 13 | 450 | 3.20e-48 | 174 |
| Msa1142810 | AT5G13660.7 | 31.197 | 468 | 261 | 14 | 44 | 480 | 13 | 450 | 3.20e-48 | 174 |
| Msa1142810 | AT5G13660.4 | 31.130 | 469 | 261 | 15 | 44 | 480 | 13 | 451 | 1.36e-46 | 170 |
| Msa1142810 | AT3G53680.1 | 50.769 | 130 | 64 | 0 | 418 | 547 | 172 | 301 | 1.39e-36 | 145 |
| Msa1142810 | AT3G53680.2 | 50.769 | 130 | 64 | 0 | 418 | 547 | 172 | 301 | 1.50e-36 | 145 |
| Msa1142810 | AT5G13660.5 | 29.438 | 445 | 253 | 14 | 44 | 457 | 13 | 427 | 2.72e-36 | 140 |
| Msa1142810 | AT5G13660.3 | 29.438 | 445 | 253 | 14 | 44 | 457 | 13 | 427 | 2.72e-36 | 140 |
| Msa1142810 | AT2G37520.1 | 45.513 | 156 | 75 | 2 | 400 | 547 | 138 | 291 | 3.18e-36 | 144 |
| Msa1142810 | AT2G27980.1 | 30.702 | 114 | 74 | 1 | 428 | 536 | 377 | 490 | 5.42e-13 | 72.8 |
| Msa1142810 | AT2G36720.1 | 31.897 | 116 | 77 | 1 | 426 | 539 | 258 | 373 | 5.63e-11 | 66.2 |
| Msa1142810 | AT2G36720.2 | 31.897 | 116 | 77 | 1 | 426 | 539 | 258 | 373 | 5.63e-11 | 66.2 |
Find 136 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCAACATCTCTAAATTT+TGG | 0.158676 | 7_4:+17580294 | Msa1142810:CDS |
| CACAGCAGTTCCATTTCTTT+TGG | 0.171039 | 7_4:+17580837 | Msa1142810:CDS |
| AACATGGGAAGGAATGATTT+TGG | 0.179977 | 7_4:+17580213 | Msa1142810:CDS |
| TTCTTTCTCTTGTAATTTGC+TGG | 0.222369 | 7_4:+17581998 | Msa1142810:three_prime_UTR |
| TAATAGTTCTGATCCGTTAA+TGG | 0.239862 | 7_4:+17580905 | Msa1142810:CDS |
| GTGCTATTTACAGGTGGATT+AGG | 0.277455 | 7_4:-17580984 | None:intergenic |
| GAAGGCTTCTTCGCCGTCTT+TGG | 0.290403 | 7_4:-17581053 | None:intergenic |
| AACCACTGATGACTTCTCTT+TGG | 0.320372 | 7_4:-17579970 | None:intergenic |
| AATCTTCAAGGAGTCATAAA+AGG | 0.320515 | 7_4:+17581263 | Msa1142810:CDS |
| CTTGAGCTTCAGCGCATCTA+TGG | 0.322542 | 7_4:+17581776 | Msa1142810:CDS |
| CAACACCTTGAGCTGAGTTC+TGG | 0.325535 | 7_4:-17580932 | None:intergenic |
| ATGGGTCACATCTTGAATAA+AGG | 0.333264 | 7_4:+17580477 | Msa1142810:CDS |
| TGCTATTTACAGGTGGATTA+GGG | 0.335921 | 7_4:-17580983 | None:intergenic |
| TTGATTCACTCAGATCCTTC+TGG | 0.339933 | 7_4:-17580959 | None:intergenic |
| ACCAAAGGAACTTTCGTACT+TGG | 0.339999 | 7_4:+17581616 | Msa1142810:CDS |
| AATAGTTCTGATCCGTTAAT+GGG | 0.344955 | 7_4:+17580906 | Msa1142810:CDS |
| CATTTCAGAATAAAGGCTTC+TGG | 0.345828 | 7_4:+17579881 | Msa1142810:CDS |
| CAAGGAGTCATAAAAGGAAC+TGG | 0.362115 | 7_4:+17581269 | Msa1142810:CDS |
| GTCAAAAGTTTGTTGTCAAC+TGG | 0.363595 | 7_4:+17581098 | Msa1142810:CDS |
| TTGTAGATATGTAACTTCTT+TGG | 0.365565 | 7_4:+17581855 | Msa1142810:three_prime_UTR |
| AACAATGAATGTTTCTCAAT+GGG | 0.370603 | 7_4:+17580068 | Msa1142810:CDS |
| AAATTCTCCGGCGTTAGTTC+CGG | 0.370990 | 7_4:+17578400 | Msa1142810:CDS |
| TCAAAGAATATGTGACTGTT+AGG | 0.374223 | 7_4:-17581495 | None:intergenic |
| TCTCAATGGGAAACCAGTTC+GGG | 0.378276 | 7_4:+17580081 | Msa1142810:CDS |
| TGGGTCACATCTTGAATAAA+GGG | 0.383464 | 7_4:+17580478 | Msa1142810:CDS |
| GAAGGGAAGCTGTTAGTAGA+AGG | 0.385334 | 7_4:-17581071 | None:intergenic |
| TTCTCAATGGGAAACCAGTT+CGG | 0.391371 | 7_4:+17580080 | Msa1142810:CDS |
| CAACAATGAATGTTTCTCAA+TGG | 0.391558 | 7_4:+17580067 | Msa1142810:CDS |
| CACTTCCATTGTTATACGTT+GGG | 0.393576 | 7_4:-17580440 | None:intergenic |
| AGGAGAAACTTTCACAACTA+TGG | 0.396844 | 7_4:+17580710 | Msa1142810:CDS |
| CAATGGGTCGGTCCTTTGAC+AGG | 0.400048 | 7_4:+17580559 | Msa1142810:CDS |
| ATGAAAACCTCCAAAAGAAA+TGG | 0.400464 | 7_4:-17580847 | None:intergenic |
| GTTTGAATCCACCTTATCAT+AGG | 0.401573 | 7_4:-17580739 | None:intergenic |
| TCCAAGTACGAAAGTTCCTT+TGG | 0.410052 | 7_4:-17581617 | None:intergenic |
| CAGCTATGCAACCAACTTCT+CGG | 0.415402 | 7_4:-17579909 | None:intergenic |
| TTCTTGTTGCTGAACATTTG+AGG | 0.417010 | 7_4:-17580009 | None:intergenic |
| GAGTTCTGGTTGCCCATTAA+CGG | 0.417278 | 7_4:-17580918 | None:intergenic |
| AGTCACATATTCTTTGAGAA+TGG | 0.417958 | 7_4:+17581501 | Msa1142810:CDS |
| TCAGACAATTGGCCAGTGAC+TGG | 0.422372 | 7_4:-17580111 | None:intergenic |
| ATAACAATGGGTCAGTCATA+TGG | 0.422911 | 7_4:+17580597 | Msa1142810:CDS |
| CAGTGGAGTCATTCAGTTGA+GGG | 0.429009 | 7_4:-17580875 | None:intergenic |
| GGTCCAACCTATGGTAAATC+AGG | 0.436238 | 7_4:+17580690 | Msa1142810:CDS |
| AGCTATGCAACCAACTTCTC+GGG | 0.441566 | 7_4:-17579908 | None:intergenic |
| AAAGTTCCTTTGGTTGATAG+TGG | 0.444705 | 7_4:-17581607 | None:intergenic |
| TTGTTGATGGGTCACAATCA+TGG | 0.445474 | 7_4:+17580513 | Msa1142810:CDS |
| CTCATGCCCCATGGAATATG+AGG | 0.451401 | 7_4:-17580652 | None:intergenic |
| TGATATCTGCAAGGGGCAAA+AGG | 0.456965 | 7_4:+17581307 | Msa1142810:CDS |
| ATATTTCCACTTCCAATTGA+CGG | 0.459621 | 7_4:-17580189 | None:intergenic |
| GATGCTATTCAAACTGTGAC+AGG | 0.460759 | 7_4:+17581582 | Msa1142810:CDS |
| GCATGAGAGCATTACATCAA+TGG | 0.473987 | 7_4:+17580668 | Msa1142810:CDS |
| AACGGCGGAGCGCCACCGTC+GGG | 0.473994 | 7_4:+17578377 | Msa1142810:CDS |
| CGGTCCTTTGACAGGGGCGA+TGG | 0.475949 | 7_4:+17580567 | Msa1142810:CDS |
| TCTCCTGATTTACCATAGGT+TGG | 0.477084 | 7_4:-17580693 | None:intergenic |
| TATGGCTCCTTCCTATGATA+AGG | 0.482881 | 7_4:+17580728 | Msa1142810:CDS |
| TCGGGATTTCACCCAGTCAC+TGG | 0.483723 | 7_4:+17580099 | Msa1142810:CDS |
| TAAAATATTGTACATGGTCA+AGG | 0.484112 | 7_4:+17581141 | Msa1142810:CDS |
| ATGAATTTGAGCGTCACGCT+GGG | 0.489424 | 7_4:+17581457 | Msa1142810:CDS |
| CCAAAATTTAGAGATGTTGA+AGG | 0.491770 | 7_4:-17580294 | None:intergenic |
| AACAAGAAACAAGCAGTTGA+AGG | 0.495670 | 7_4:+17580024 | Msa1142810:CDS |
| AACATTCCGTCAATTGGAAG+TGG | 0.497012 | 7_4:+17580183 | Msa1142810:CDS |
| GATGGAAATTTCATAACAAT+GGG | 0.497410 | 7_4:+17580585 | Msa1142810:CDS |
| GAACATAACCGAACTTATCA+TGG | 0.498568 | 7_4:-17581815 | None:intergenic |
| AATATATTGTTATCAGCTGC+TGG | 0.498749 | 7_4:-17580369 | None:intergenic |
| AGCTGCTACCATGATAAGTT+CGG | 0.507571 | 7_4:+17581807 | Msa1142810:exon |
| TATGGTAATGATTCGTCTAT+CGG | 0.508871 | 7_4:+17580243 | Msa1142810:CDS |
| TCACTTCCATTGTTATACGT+TGG | 0.511609 | 7_4:-17580441 | None:intergenic |
| GACTGGGTGAAATCCCGAAC+TGG | 0.512048 | 7_4:-17580094 | None:intergenic |
| TTCTGGAGTCCCCGAGAAGT+TGG | 0.514546 | 7_4:+17579898 | Msa1142810:CDS |
| GCCACCGTCGGGAAATTCTC+CGG | 0.514705 | 7_4:+17578388 | Msa1142810:CDS |
| CATGAGAGCATTACATCAAT+GGG | 0.516985 | 7_4:+17580669 | Msa1142810:CDS |
| ACATCAATGGGTCCAACCTA+TGG | 0.518084 | 7_4:+17580681 | Msa1142810:CDS |
| TCTAGGAACCTCATATTCCA+TGG | 0.519808 | 7_4:+17580644 | Msa1142810:CDS |
| CGATGGAAATTTCATAACAA+TGG | 0.521756 | 7_4:+17580584 | Msa1142810:CDS |
| TTCTTCAGTGTCACTATCAA+CGG | 0.529026 | 7_4:+17578359 | Msa1142810:CDS |
| CTCTTGAACAACAGCATAGA+CGG | 0.530061 | 7_4:-17581529 | None:intergenic |
| AAGTGACAACACCATTGCTA+TGG | 0.530676 | 7_4:+17580458 | Msa1142810:CDS |
| GAGTTGCCGCTGTCAAAAGA+TGG | 0.533466 | 7_4:-17580777 | None:intergenic |
| AGTTTCTCCTGATTTACCAT+AGG | 0.534049 | 7_4:-17580697 | None:intergenic |
| CTAGGAACCTCATATTCCAT+GGG | 0.535133 | 7_4:+17580645 | Msa1142810:CDS |
| TATGAATTTGAGCGTCACGC+TGG | 0.536356 | 7_4:+17581456 | Msa1142810:CDS |
| CAGTTGAAGGTGTTAGTGAC+AGG | 0.538066 | 7_4:+17580037 | Msa1142810:CDS |
| CAGACAATTGGCCAGTGACT+GGG | 0.538084 | 7_4:-17580110 | None:intergenic |
| GAGAAGTCATCAGTGGTTTG+TGG | 0.544150 | 7_4:+17579975 | Msa1142810:CDS |
| ATTTCCATCGCCCCTGTCAA+AGG | 0.551415 | 7_4:-17580571 | None:intergenic |
| GATGACAATTTGATATCTCT+AGG | 0.565214 | 7_4:+17580627 | Msa1142810:CDS |
| GAATCCACCTTATCATAGGA+AGG | 0.567729 | 7_4:-17580735 | None:intergenic |
| AGTGACAACACCATTGCTAT+GGG | 0.569952 | 7_4:+17580459 | Msa1142810:CDS |
| CTGTCAATGTCTCATTCCAC+AGG | 0.570056 | 7_4:+17580267 | Msa1142810:CDS |
| TGCATAGCTGAAGAAAATGT+TGG | 0.572386 | 7_4:+17579922 | Msa1142810:CDS |
| CACATCTTGAATAAAGGGGA+AGG | 0.572715 | 7_4:+17580483 | Msa1142810:CDS |
| TATCAGCTGCTGGCGTGCCA+TGG | 0.576021 | 7_4:-17580359 | None:intergenic |
| CCAGTGGAGTCATTCAGTTG+AGG | 0.578078 | 7_4:-17580876 | None:intergenic |
| CCTCAACTGAATGACTCCAC+TGG | 0.578212 | 7_4:+17580876 | Msa1142810:CDS |
| AAAATATTGTACATGGTCAA+GGG | 0.581599 | 7_4:+17581142 | Msa1142810:CDS |
| CAACGGCGGAGCGCCACCGT+CGG | 0.581851 | 7_4:+17578376 | Msa1142810:CDS |
| AATGGGTCGGTCCTTTGACA+GGG | 0.582450 | 7_4:+17580560 | Msa1142810:CDS |
| GGAAGTGGAAATATAAACAT+GGG | 0.583747 | 7_4:+17580198 | Msa1142810:CDS |
| GGCTCCTTCCTATGATAAGG+TGG | 0.586030 | 7_4:+17580731 | Msa1142810:CDS |
| TTCCGGTAAAATATTGTACA+TGG | 0.591553 | 7_4:+17581135 | Msa1142810:CDS |
| AAGGAAGGTGGTGGTTTGTG+AGG | 0.593482 | 7_4:-17582043 | None:intergenic |
| AATGGGTCAGTCATATGGAA+AGG | 0.594796 | 7_4:+17580602 | Msa1142810:CDS |
| AACTGCTGTGACAATTACTC+AGG | 0.595100 | 7_4:-17580824 | None:intergenic |
| GTGGAAATATAAACATGGGA+AGG | 0.596002 | 7_4:+17580202 | Msa1142810:CDS |
| TTTGGAGTGCTATTTACAGG+TGG | 0.603301 | 7_4:-17580990 | None:intergenic |
| CAAAATTTAGAGATGTTGAA+GGG | 0.603626 | 7_4:-17580293 | None:intergenic |
| TGGAAGTGGAAATATAAACA+TGG | 0.609494 | 7_4:+17580197 | Msa1142810:CDS |
| GAAGCTCAAGAGTAGCAGCT+TGG | 0.610166 | 7_4:-17581763 | None:intergenic |
| GGCAACCAGAACTCAGCTCA+AGG | 0.613118 | 7_4:+17580927 | Msa1142810:CDS |
| GGGTCACATCTTGAATAAAG+GGG | 0.616907 | 7_4:+17580479 | Msa1142810:CDS |
| TGTTCATGTGATATCTGCAA+GGG | 0.617361 | 7_4:+17581299 | Msa1142810:CDS |
| AGATGTTGAAGGGCCTCCTG+TGG | 0.619182 | 7_4:-17580283 | None:intergenic |
| AGAACTATTAATCATTCCAG+TGG | 0.619671 | 7_4:-17580892 | None:intergenic |
| CAAGTCAGAGATTCTGACCA+TGG | 0.628932 | 7_4:+17580342 | Msa1142810:CDS |
| GTGTTCATGTGATATCTGCA+AGG | 0.629189 | 7_4:+17581298 | Msa1142810:CDS |
| TCAGACCCAACGTATAACAA+TGG | 0.630204 | 7_4:+17580435 | Msa1142810:CDS |
| TAACTTCTTTGGTGTATGAG+TGG | 0.634062 | 7_4:+17581866 | Msa1142810:three_prime_UTR |
| ACATCTTGAATAAAGGGGAA+GGG | 0.634399 | 7_4:+17580484 | Msa1142810:CDS |
| GCTTCAGCGCATCTATGGAA+AGG | 0.634908 | 7_4:+17581781 | Msa1142810:CDS |
| GCCGGAGAATTTCCCGACGG+TGG | 0.636874 | 7_4:-17578389 | None:intergenic |
| CAAGATGTGACCCATAGCAA+TGG | 0.638046 | 7_4:-17580469 | None:intergenic |
| TCAAGGTGTTGACAGCCAGA+AGG | 0.640542 | 7_4:+17580944 | Msa1142810:CDS |
| TGTAATGCTCTCATGCCCCA+TGG | 0.641796 | 7_4:-17580661 | None:intergenic |
| GATGGGTCACAATCATGGCA+AGG | 0.642988 | 7_4:+17580518 | Msa1142810:CDS |
| ATGGGTCGGTCCTTTGACAG+GGG | 0.647731 | 7_4:+17580561 | Msa1142810:CDS |
| TTCAGTGTCACTATCAACGG+CGG | 0.654201 | 7_4:+17578362 | Msa1142810:CDS |
| AAGGAGTCATAAAAGGAACT+GGG | 0.654430 | 7_4:+17581270 | Msa1142810:CDS |
| TGCAGATATCACATGAACAC+AGG | 0.662846 | 7_4:-17581295 | None:intergenic |
| GCTATGCAACCAACTTCTCG+GGG | 0.670612 | 7_4:-17579907 | None:intergenic |
| TGAATTTGAGCGTCACGCTG+GGG | 0.673881 | 7_4:+17581458 | Msa1142810:CDS |
| TCAATGTCTCATTCCACAGG+AGG | 0.675589 | 7_4:+17580270 | Msa1142810:CDS |
| CAGGAGCCACTATCAACCAA+AGG | 0.676859 | 7_4:+17581601 | Msa1142810:CDS |
| AACCAAAGAGAAGTCATCAG+TGG | 0.682911 | 7_4:+17579968 | Msa1142810:CDS |
| ATATTGTACATGGTCAAGGG+AGG | 0.698377 | 7_4:+17581145 | Msa1142810:CDS |
| TAGGAACCTCATATTCCATG+GGG | 0.726058 | 7_4:+17580646 | Msa1142810:CDS |
| AACGCCGGAGAATTTCCCGA+CGG | 0.732784 | 7_4:-17578392 | None:intergenic |
| GTTCATGTGATATCTGCAAG+GGG | 0.764444 | 7_4:+17581300 | Msa1142810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTAAAAAAAATCATTTTA+AGG | - | chr7_4:17579075-17579094 | None:intergenic | 10.0% |
| !!! | TTTTTTACTTATAATAGTAT+AGG | + | chr7_4:17579085-17579104 | Msa1142810:intron | 10.0% |
| !!! | TGTTTTTAATTTACAAAATT+TGG | + | chr7_4:17579535-17579554 | Msa1142810:intron | 10.0% |
| !! | ATTTATTTAATTGAACAAGT+TGG | - | chr7_4:17578436-17578455 | None:intergenic | 15.0% |
| !!! | AAAAGTATTAACAAATAGAA+GGG | - | chr7_4:17578516-17578535 | None:intergenic | 15.0% |
| !!! | AAAAAGTATTAACAAATAGA+AGG | - | chr7_4:17578517-17578536 | None:intergenic | 15.0% |
| !! | TTCTATGTAGTTATTTAAAT+CGG | + | chr7_4:17579496-17579515 | Msa1142810:intron | 15.0% |
| !! | AGTAAGAAATTAAAAGAAAA+GGG | - | chr7_4:17579676-17579695 | None:intergenic | 15.0% |
| !! | AAGTAAGAAATTAAAAGAAA+AGG | - | chr7_4:17579677-17579696 | None:intergenic | 15.0% |
| !!! | GTTATTTTTTAACTAGTTTA+TGG | + | chr7_4:17579731-17579750 | Msa1142810:intron | 15.0% |
| !!! | AAAAGTTTTAAAATGTTAGT+AGG | - | chr7_4:17581223-17581242 | None:intergenic | 15.0% |
| !! | ATTAAAATTAGAAGTTGAAA+AGG | - | chr7_4:17581717-17581736 | None:intergenic | 15.0% |
| !! | TTTACTTATAATAGTATAGG+AGG | + | chr7_4:17579088-17579107 | Msa1142810:intron | 20.0% |
| !! | TTACTTATAATAGTATAGGA+GGG | + | chr7_4:17579089-17579108 | Msa1142810:intron | 20.0% |
| !!! | TCTTTTAATTTCTTACTTGA+TGG | + | chr7_4:17579679-17579698 | Msa1142810:intron | 20.0% |
| !!! | CTTTTAATTTCTTACTTGAT+GGG | + | chr7_4:17579680-17579699 | Msa1142810:intron | 20.0% |
| !!! | TTTTAATTTCTTACTTGATG+GGG | + | chr7_4:17579681-17579700 | Msa1142810:intron | 20.0% |
| !!! | TTTTAGTCATTTCAGAATAA+AGG | + | chr7_4:17579874-17579893 | Msa1142810:intron | 20.0% |
| !!! | GATAACAATATATTTTCGAT+AGG | + | chr7_4:17580378-17580397 | Msa1142810:CDS | 20.0% |
| !!! | AGATCAACATATTTTATCAA+TGG | + | chr7_4:17580542-17580561 | Msa1142810:CDS | 20.0% |
| !!! | GATCAACATATTTTATCAAT+GGG | + | chr7_4:17580543-17580562 | Msa1142810:CDS | 20.0% |
| !!! | TCATTTTTAGCATTAGATTT+TGG | - | chr7_4:17581011-17581030 | None:intergenic | 20.0% |
| !!! | CAACTTGAATGTTTTATTTA+TGG | + | chr7_4:17581942-17581961 | Msa1142810:three_prime_UTR | 20.0% |
| !! | TATTTAATTGAACAAGTTGG+AGG | - | chr7_4:17578433-17578452 | None:intergenic | 25.0% |
| !!! | TAATGCAGATTTTGATTTGA+TGG | + | chr7_4:17578581-17578600 | Msa1142810:intron | 25.0% |
| !!! | TGTTTGTCTTTGTTTTTTCA+TGG | + | chr7_4:17578727-17578746 | Msa1142810:intron | 25.0% |
| ! | CATAGTAAGTATACTTACTT+TGG | + | chr7_4:17578767-17578786 | Msa1142810:intron | 25.0% |
| !!! | TTTTTGAATAACGAAGTATC+TGG | + | chr7_4:17579011-17579030 | Msa1142810:intron | 25.0% |
| !!! | ATCTGGTCTATATTTTAAAC+CGG | + | chr7_4:17579028-17579047 | Msa1142810:intron | 25.0% |
| !!! | TATTTTAAACCGGATACATT+AGG | + | chr7_4:17579038-17579057 | Msa1142810:intron | 25.0% |
| ! | TCAAAGCATGCTTAAAAAAA+GGG | - | chr7_4:17579148-17579167 | None:intergenic | 25.0% |
| ! | TTCAAAGCATGCTTAAAAAA+AGG | - | chr7_4:17579149-17579168 | None:intergenic | 25.0% |
| !! | AGTTGATCTTAATGATTTGT+TGG | + | chr7_4:17579187-17579206 | Msa1142810:intron | 25.0% |
| ! | TTTATTTACTGAATTGTGAG+TGG | + | chr7_4:17579210-17579229 | Msa1142810:intron | 25.0% |
| ! | AGTTTATAAATGCATAACTC+TGG | + | chr7_4:17579312-17579331 | Msa1142810:intron | 25.0% |
| ! | ATGTAGTTATTTAAATCGGA+AGG | + | chr7_4:17579500-17579519 | Msa1142810:intron | 25.0% |
| ! | AGAAATTAAAAGAAAAGGGA+AGG | - | chr7_4:17579672-17579691 | None:intergenic | 25.0% |
| !! | TTTAATTTCTTACTTGATGG+GGG | + | chr7_4:17579682-17579701 | Msa1142810:intron | 25.0% |
| ! | CAATAATATGTCTTCATACA+CGG | + | chr7_4:17579762-17579781 | Msa1142810:intron | 25.0% |
| !! | TGTCTTCTTTAAAAATGCAT+TGG | + | chr7_4:17579792-17579811 | Msa1142810:intron | 25.0% |
| ! | AACAATGAATGTTTCTCAAT+GGG | + | chr7_4:17580068-17580087 | Msa1142810:CDS | 25.0% |
| ! | CAAAATTTAGAGATGTTGAA+GGG | - | chr7_4:17580296-17580315 | None:intergenic | 25.0% |
| !! | AACATATTTTATCAATGGGT+CGG | + | chr7_4:17580547-17580566 | Msa1142810:CDS | 25.0% |
| ! | GATGGAAATTTCATAACAAT+GGG | + | chr7_4:17580585-17580604 | Msa1142810:CDS | 25.0% |
| ! | TAAAAACAAAGAACCAAAGA+CGG | + | chr7_4:17581040-17581059 | Msa1142810:CDS | 25.0% |
| !! | ACAAACTTTTGACATTTGAA+GGG | - | chr7_4:17581091-17581110 | None:intergenic | 25.0% |
| !! | AACAAACTTTTGACATTTGA+AGG | - | chr7_4:17581092-17581111 | None:intergenic | 25.0% |
| ! | TAAAATATTGTACATGGTCA+AGG | + | chr7_4:17581141-17581160 | Msa1142810:CDS | 25.0% |
| ! | AAAATATTGTACATGGTCAA+GGG | + | chr7_4:17581142-17581161 | Msa1142810:CDS | 25.0% |
| !! | AAAACTTTTGATGTTCTCAT+TGG | + | chr7_4:17581234-17581253 | Msa1142810:intron | 25.0% |
| ! | TTGTAGATATGTAACTTCTT+TGG | + | chr7_4:17581855-17581874 | Msa1142810:three_prime_UTR | 25.0% |
| ! | GATTCCATTTTCTCATTTCT+AGG | + | chr7_4:17578477-17578496 | Msa1142810:intron | 30.0% |
| GAAACCTAGAAATGAGAAAA+TGG | - | chr7_4:17578484-17578503 | None:intergenic | 30.0% | |
| ! | ATGTTTCTACGTTTAGAGAA+AGG | + | chr7_4:17578684-17578703 | Msa1142810:intron | 30.0% |
| TATTAGCTGTGTCAATGTAT+CGG | + | chr7_4:17578900-17578919 | Msa1142810:intron | 30.0% | |
| CATAGGTGGTTATTATTGTA+AGG | + | chr7_4:17578964-17578983 | Msa1142810:intron | 30.0% | |
| GATTTATAAATAGCGCTCTA+TGG | + | chr7_4:17579241-17579260 | Msa1142810:intron | 30.0% | |
| TAAATTCATATCCGATCGAA+GGG | + | chr7_4:17579608-17579627 | Msa1142810:intron | 30.0% | |
| !! | CTTTGTGAATTGTGTTGATT+CGG | + | chr7_4:17579705-17579724 | Msa1142810:intron | 30.0% |
| AAGATAAGCATTCTAAGCTA+TGG | + | chr7_4:17579847-17579866 | Msa1142810:intron | 30.0% | |
| CAACAATGAATGTTTCTCAA+TGG | + | chr7_4:17580067-17580086 | Msa1142810:CDS | 30.0% | |
| GATAAAAACATTCCGTCAAT+TGG | + | chr7_4:17580177-17580196 | Msa1142810:CDS | 30.0% | |
| ATATTTCCACTTCCAATTGA+CGG | - | chr7_4:17580192-17580211 | None:intergenic | 30.0% | |
| TGGAAGTGGAAATATAAACA+TGG | + | chr7_4:17580197-17580216 | Msa1142810:CDS | 30.0% | |
| GGAAGTGGAAATATAAACAT+GGG | + | chr7_4:17580198-17580217 | Msa1142810:CDS | 30.0% | |
| !! | AATGATTTTGGGAATCAGTA+TGG | + | chr7_4:17580225-17580244 | Msa1142810:CDS | 30.0% |
| ! | TATGGTAATGATTCGTCTAT+CGG | + | chr7_4:17580243-17580262 | Msa1142810:CDS | 30.0% |
| CCAAAATTTAGAGATGTTGA+AGG | - | chr7_4:17580297-17580316 | None:intergenic | 30.0% | |
| ! | CCTTCAACATCTCTAAATTT+TGG | + | chr7_4:17580294-17580313 | Msa1142810:CDS | 30.0% |
| ! | TCAACATCTCTAAATTTTGG+TGG | + | chr7_4:17580297-17580316 | Msa1142810:CDS | 30.0% |
| !! | CTCTAAATTTTGGTGGTATA+AGG | + | chr7_4:17580304-17580323 | Msa1142810:CDS | 30.0% |
| AATATATTGTTATCAGCTGC+TGG | - | chr7_4:17580372-17580391 | None:intergenic | 30.0% | |
| CGATGGAAATTTCATAACAA+TGG | + | chr7_4:17580584-17580603 | Msa1142810:CDS | 30.0% | |
| GATGACAATTTGATATCTCT+AGG | + | chr7_4:17580627-17580646 | Msa1142810:CDS | 30.0% | |
| ATGAAAACCTCCAAAAGAAA+TGG | - | chr7_4:17580850-17580869 | None:intergenic | 30.0% | |
| AGAACTATTAATCATTCCAG+TGG | - | chr7_4:17580895-17580914 | None:intergenic | 30.0% | |
| !! | TAATAGTTCTGATCCGTTAA+TGG | + | chr7_4:17580905-17580924 | Msa1142810:CDS | 30.0% |
| !! | AATAGTTCTGATCCGTTAAT+GGG | + | chr7_4:17580906-17580925 | Msa1142810:CDS | 30.0% |
| !! | TTGTCAACTGGTATTTTTGA+TGG | + | chr7_4:17581110-17581129 | Msa1142810:CDS | 30.0% |
| TTCCGGTAAAATATTGTACA+TGG | + | chr7_4:17581135-17581154 | Msa1142810:CDS | 30.0% | |
| ! | GACCATGTACAATATTTTAC+CGG | - | chr7_4:17581140-17581159 | None:intergenic | 30.0% |
| AATCTTCAAGGAGTCATAAA+AGG | + | chr7_4:17581263-17581282 | Msa1142810:CDS | 30.0% | |
| ! | AATTTTTGCAGATCATTGCT+AGG | - | chr7_4:17581413-17581432 | None:intergenic | 30.0% |
| TCAAAGAATATGTGACTGTT+AGG | - | chr7_4:17581498-17581517 | None:intergenic | 30.0% | |
| ! | AGTCACATATTCTTTGAGAA+TGG | + | chr7_4:17581501-17581520 | Msa1142810:CDS | 30.0% |
| GACTTTAATATCTGATGCAA+GGG | - | chr7_4:17581678-17581697 | None:intergenic | 30.0% | |
| TGACTTTAATATCTGATGCA+AGG | - | chr7_4:17581679-17581698 | None:intergenic | 30.0% | |
| ! | TTCTTTCTCTTGTAATTTGC+TGG | + | chr7_4:17581998-17582017 | Msa1142810:three_prime_UTR | 30.0% |
| ! | TTCTTCAGTGTCACTATCAA+CGG | + | chr7_4:17578359-17578378 | Msa1142810:CDS | 35.0% |
| !! | GTGTAGTTGATCGATTTTGA+AGG | + | chr7_4:17578603-17578622 | Msa1142810:intron | 35.0% |
| TACATTCAAAGAGAGAGAGA+TGG | + | chr7_4:17578660-17578679 | Msa1142810:intron | 35.0% | |
| TACTTTGGTCCTATGAATCA+CGG | + | chr7_4:17578782-17578801 | Msa1142810:intron | 35.0% | |
| TATGAATCACGGATACTACT+CGG | + | chr7_4:17578793-17578812 | Msa1142810:intron | 35.0% | |
| ATTCAGTGAAGTATGTGTGT+CGG | - | chr7_4:17578863-17578882 | None:intergenic | 35.0% | |
| CATTGCATACCTAATGTATC+CGG | - | chr7_4:17579050-17579069 | None:intergenic | 35.0% | |
| !! | TTGTTTTGCGAGGTTAAACT+TGG | + | chr7_4:17579337-17579356 | Msa1142810:intron | 35.0% |
| ! | TGTTTTGCGAGGTTAAACTT+GGG | + | chr7_4:17579338-17579357 | Msa1142810:intron | 35.0% |
| AATGTGTGATGTTAACACAG+AGG | + | chr7_4:17579396-17579415 | Msa1142810:intron | 35.0% | |
| CTAAATTCATATCCGATCGA+AGG | + | chr7_4:17579607-17579626 | Msa1142810:intron | 35.0% | |
| TTAAAAGAAAAGGGAAGGCT+CGG | - | chr7_4:17579667-17579686 | None:intergenic | 35.0% | |
| CATTTCAGAATAAAGGCTTC+TGG | + | chr7_4:17579881-17579900 | Msa1142810:CDS | 35.0% | |
| TGCATAGCTGAAGAAAATGT+TGG | + | chr7_4:17579922-17579941 | Msa1142810:CDS | 35.0% | |
| TTCTTGTTGCTGAACATTTG+AGG | - | chr7_4:17580012-17580031 | None:intergenic | 35.0% | |
| AACAAGAAACAAGCAGTTGA+AGG | + | chr7_4:17580024-17580043 | Msa1142810:CDS | 35.0% | |
| CAAAAAGACGATCAGACAAT+TGG | - | chr7_4:17580125-17580144 | None:intergenic | 35.0% | |
| ! | CAATTGTCTGATCGTCTTTT+TGG | + | chr7_4:17580123-17580142 | Msa1142810:CDS | 35.0% |
| !!! | TTTTTGGATCTGGTCTTGTA+CGG | + | chr7_4:17580139-17580158 | Msa1142810:CDS | 35.0% |
| GTGGAAATATAAACATGGGA+AGG | + | chr7_4:17580202-17580221 | Msa1142810:CDS | 35.0% | |
| ! | AACATGGGAAGGAATGATTT+TGG | + | chr7_4:17580213-17580232 | Msa1142810:CDS | 35.0% |
| ! | ACATGGGAAGGAATGATTTT+GGG | + | chr7_4:17580214-17580233 | Msa1142810:CDS | 35.0% |
| CACTTCCATTGTTATACGTT+GGG | - | chr7_4:17580443-17580462 | None:intergenic | 35.0% | |
| TCACTTCCATTGTTATACGT+TGG | - | chr7_4:17580444-17580463 | None:intergenic | 35.0% | |
| ATGGGTCACATCTTGAATAA+AGG | + | chr7_4:17580477-17580496 | Msa1142810:CDS | 35.0% | |
| TGGGTCACATCTTGAATAAA+GGG | + | chr7_4:17580478-17580497 | Msa1142810:CDS | 35.0% | |
| ACATCTTGAATAAAGGGGAA+GGG | + | chr7_4:17580484-17580503 | Msa1142810:CDS | 35.0% | |
| !!! | GAAGGGAGTTTTTTGTTGAT+GGG | + | chr7_4:17580501-17580520 | Msa1142810:CDS | 35.0% |
| ATAACAATGGGTCAGTCATA+TGG | + | chr7_4:17580597-17580616 | Msa1142810:CDS | 35.0% | |
| !! | CATGAGAGCATTACATCAAT+GGG | + | chr7_4:17580669-17580688 | Msa1142810:CDS | 35.0% |
| AGTTTCTCCTGATTTACCAT+AGG | - | chr7_4:17580700-17580719 | None:intergenic | 35.0% | |
| AGGAGAAACTTTCACAACTA+TGG | + | chr7_4:17580710-17580729 | Msa1142810:CDS | 35.0% | |
| GTTTGAATCCACCTTATCAT+AGG | - | chr7_4:17580742-17580761 | None:intergenic | 35.0% | |
| ! | ACAATTCCATCTTTTGACAG+CGG | + | chr7_4:17580771-17580790 | Msa1142810:CDS | 35.0% |
| !! | TGCTATTTACAGGTGGATTA+GGG | - | chr7_4:17580986-17581005 | None:intergenic | 35.0% |
| !!! | GATTTTGGAGTGCTATTTAC+AGG | - | chr7_4:17580996-17581015 | None:intergenic | 35.0% |
| !! | GTCAAAAGTTTGTTGTCAAC+TGG | + | chr7_4:17581098-17581117 | Msa1142810:CDS | 35.0% |
| !! | TGGTATTTTTGATGGCATTC+CGG | + | chr7_4:17581118-17581137 | Msa1142810:CDS | 35.0% |
| CATTGGCAGAAAAATCTTCA+AGG | + | chr7_4:17581251-17581270 | Msa1142810:intron | 35.0% | |
| AAGGAGTCATAAAAGGAACT+GGG | + | chr7_4:17581270-17581289 | Msa1142810:CDS | 35.0% | |
| TGTTCATGTGATATCTGCAA+GGG | + | chr7_4:17581299-17581318 | Msa1142810:CDS | 35.0% | |
| CTGCAAAAATTCTGTCATGA+AGG | + | chr7_4:17581422-17581441 | Msa1142810:intron | 35.0% | |
| !!! | ACTGTTAGGATGTTTTGACT+TGG | - | chr7_4:17581484-17581503 | None:intergenic | 35.0% |
| !! | AAAGTTCCTTTGGTTGATAG+TGG | - | chr7_4:17581610-17581629 | None:intergenic | 35.0% |
| CTTTCGTACTTGGAAATGTA+AGG | + | chr7_4:17581626-17581645 | Msa1142810:intron | 35.0% | |
| GAACATAACCGAACTTATCA+TGG | - | chr7_4:17581818-17581837 | None:intergenic | 35.0% | |
| ! | TAACTTCTTTGGTGTATGAG+TGG | + | chr7_4:17581866-17581885 | Msa1142810:three_prime_UTR | 35.0% |
| GAGTAGTATCCGTGATTCAT+AGG | - | chr7_4:17578794-17578813 | None:intergenic | 40.0% | |
| ATGAATCACGGATACTACTC+GGG | + | chr7_4:17578794-17578813 | Msa1142810:intron | 40.0% | |
| !! | AACTCTGGTATTGTTTTGCG+AGG | + | chr7_4:17579327-17579346 | Msa1142810:intron | 40.0% |
| ACTTGTGTGCATGCTTGAAA+TGG | + | chr7_4:17579432-17579451 | Msa1142810:intron | 40.0% | |
| ! | TGCATGCTTGAAATGGATTC+TGG | + | chr7_4:17579439-17579458 | Msa1142810:intron | 40.0% |
| AACCAAAGAGAAGTCATCAG+TGG | + | chr7_4:17579968-17579987 | Msa1142810:CDS | 40.0% | |
| AACCACTGATGACTTCTCTT+TGG | - | chr7_4:17579973-17579992 | None:intergenic | 40.0% | |
| TTCTCAATGGGAAACCAGTT+CGG | + | chr7_4:17580080-17580099 | Msa1142810:CDS | 40.0% | |
| ! | TCTGATCGTCTTTTTGGATC+TGG | + | chr7_4:17580129-17580148 | Msa1142810:CDS | 40.0% |
| AACATTCCGTCAATTGGAAG+TGG | + | chr7_4:17580183-17580202 | Msa1142810:CDS | 40.0% | |
| TCAGACCCAACGTATAACAA+TGG | + | chr7_4:17580435-17580454 | Msa1142810:CDS | 40.0% | |
| AAGTGACAACACCATTGCTA+TGG | + | chr7_4:17580458-17580477 | Msa1142810:CDS | 40.0% | |
| AGTGACAACACCATTGCTAT+GGG | + | chr7_4:17580459-17580478 | Msa1142810:CDS | 40.0% | |
| GGGTCACATCTTGAATAAAG+GGG | + | chr7_4:17580479-17580498 | Msa1142810:CDS | 40.0% | |
| CACATCTTGAATAAAGGGGA+AGG | + | chr7_4:17580483-17580502 | Msa1142810:CDS | 40.0% | |
| !!! | GGAAGGGAGTTTTTTGTTGA+TGG | + | chr7_4:17580500-17580519 | Msa1142810:CDS | 40.0% |
| ! | TTGTTGATGGGTCACAATCA+TGG | + | chr7_4:17580513-17580532 | Msa1142810:CDS | 40.0% |
| AATGGGTCAGTCATATGGAA+AGG | + | chr7_4:17580602-17580621 | Msa1142810:CDS | 40.0% | |
| TCTAGGAACCTCATATTCCA+TGG | + | chr7_4:17580644-17580663 | Msa1142810:CDS | 40.0% | |
| CTAGGAACCTCATATTCCAT+GGG | + | chr7_4:17580645-17580664 | Msa1142810:CDS | 40.0% | |
| TAGGAACCTCATATTCCATG+GGG | + | chr7_4:17580646-17580665 | Msa1142810:CDS | 40.0% | |
| !! | GCATGAGAGCATTACATCAA+TGG | + | chr7_4:17580668-17580687 | Msa1142810:CDS | 40.0% |
| TCTCCTGATTTACCATAGGT+TGG | - | chr7_4:17580696-17580715 | None:intergenic | 40.0% | |
| TATGGCTCCTTCCTATGATA+AGG | + | chr7_4:17580728-17580747 | Msa1142810:CDS | 40.0% | |
| GAATCCACCTTATCATAGGA+AGG | - | chr7_4:17580738-17580757 | None:intergenic | 40.0% | |
| !!! | TTACTCAGGTTTTGACTCAC+AGG | - | chr7_4:17580813-17580832 | None:intergenic | 40.0% |
| AACTGCTGTGACAATTACTC+AGG | - | chr7_4:17580827-17580846 | None:intergenic | 40.0% | |
| ! | CACAGCAGTTCCATTTCTTT+TGG | + | chr7_4:17580837-17580856 | Msa1142810:CDS | 40.0% |
| ! | AGCAGTTCCATTTCTTTTGG+AGG | + | chr7_4:17580840-17580859 | Msa1142810:CDS | 40.0% |
| TTGATTCACTCAGATCCTTC+TGG | - | chr7_4:17580962-17580981 | None:intergenic | 40.0% | |
| !! | GTGCTATTTACAGGTGGATT+AGG | - | chr7_4:17580987-17581006 | None:intergenic | 40.0% |
| !! | TTTGGAGTGCTATTTACAGG+TGG | - | chr7_4:17580993-17581012 | None:intergenic | 40.0% |
| ATATTGTACATGGTCAAGGG+AGG | + | chr7_4:17581145-17581164 | Msa1142810:CDS | 40.0% | |
| CAAGGAGTCATAAAAGGAAC+TGG | + | chr7_4:17581269-17581288 | Msa1142810:CDS | 40.0% | |
| TGCAGATATCACATGAACAC+AGG | - | chr7_4:17581298-17581317 | None:intergenic | 40.0% | |
| GTGTTCATGTGATATCTGCA+AGG | + | chr7_4:17581298-17581317 | Msa1142810:CDS | 40.0% | |
| GTTCATGTGATATCTGCAAG+GGG | + | chr7_4:17581300-17581319 | Msa1142810:CDS | 40.0% | |
| TATGCATGAGCACTATTGCT+AGG | - | chr7_4:17581375-17581394 | None:intergenic | 40.0% | |
| CTCTTGAACAACAGCATAGA+CGG | - | chr7_4:17581532-17581551 | None:intergenic | 40.0% | |
| GATGCTATTCAAACTGTGAC+AGG | + | chr7_4:17581582-17581601 | Msa1142810:CDS | 40.0% | |
| ACCAAAGGAACTTTCGTACT+TGG | + | chr7_4:17581616-17581635 | Msa1142810:CDS | 40.0% | |
| TCCAAGTACGAAAGTTCCTT+TGG | - | chr7_4:17581620-17581639 | None:intergenic | 40.0% | |
| TTGGTATGATGCTGAAAAGG+AGG | - | chr7_4:17581747-17581766 | None:intergenic | 40.0% | |
| AGCTTGGTATGATGCTGAAA+AGG | - | chr7_4:17581750-17581769 | None:intergenic | 40.0% | |
| AGCTGCTACCATGATAAGTT+CGG | + | chr7_4:17581807-17581826 | Msa1142810:exon | 40.0% | |
| ! | TTCAGTGTCACTATCAACGG+CGG | + | chr7_4:17578362-17578381 | Msa1142810:CDS | 45.0% |
| AAATTCTCCGGCGTTAGTTC+CGG | + | chr7_4:17578400-17578419 | Msa1142810:CDS | 45.0% | |
| AAGGGCTCTCGTCTTAAGAA+AGG | + | chr7_4:17579626-17579645 | Msa1142810:intron | 45.0% | |
| AGCTATGCAACCAACTTCTC+GGG | - | chr7_4:17579911-17579930 | None:intergenic | 45.0% | |
| CAGCTATGCAACCAACTTCT+CGG | - | chr7_4:17579912-17579931 | None:intergenic | 45.0% | |
| GAGAAGTCATCAGTGGTTTG+TGG | + | chr7_4:17579975-17579994 | Msa1142810:CDS | 45.0% | |
| !! | CAGTTGAAGGTGTTAGTGAC+AGG | + | chr7_4:17580037-17580056 | Msa1142810:CDS | 45.0% |
| TCTCAATGGGAAACCAGTTC+GGG | + | chr7_4:17580081-17580100 | Msa1142810:CDS | 45.0% | |
| CTGTCAATGTCTCATTCCAC+AGG | + | chr7_4:17580267-17580286 | Msa1142810:CDS | 45.0% | |
| TCAATGTCTCATTCCACAGG+AGG | + | chr7_4:17580270-17580289 | Msa1142810:CDS | 45.0% | |
| CAAGTCAGAGATTCTGACCA+TGG | + | chr7_4:17580342-17580361 | Msa1142810:CDS | 45.0% | |
| CAAGATGTGACCCATAGCAA+TGG | - | chr7_4:17580472-17580491 | None:intergenic | 45.0% | |
| ACATCAATGGGTCCAACCTA+TGG | + | chr7_4:17580681-17580700 | Msa1142810:CDS | 45.0% | |
| GGTCCAACCTATGGTAAATC+AGG | + | chr7_4:17580690-17580709 | Msa1142810:CDS | 45.0% | |
| CAGTGGAGTCATTCAGTTGA+GGG | - | chr7_4:17580878-17580897 | None:intergenic | 45.0% | |
| ! | GAGTTCTGGTTGCCCATTAA+CGG | - | chr7_4:17580921-17580940 | None:intergenic | 45.0% |
| GAAGGGAAGCTGTTAGTAGA+AGG | - | chr7_4:17581074-17581093 | None:intergenic | 45.0% | |
| TGATATCTGCAAGGGGCAAA+AGG | + | chr7_4:17581307-17581326 | Msa1142810:CDS | 45.0% | |
| TATGAATTTGAGCGTCACGC+TGG | + | chr7_4:17581456-17581475 | Msa1142810:CDS | 45.0% | |
| ATGAATTTGAGCGTCACGCT+GGG | + | chr7_4:17581457-17581476 | Msa1142810:CDS | 45.0% | |
| AGAGCTGAAAAACAGTCCTC+AGG | + | chr7_4:17581548-17581567 | Msa1142810:CDS | 45.0% | |
| !! | GCATCAAAAAGCATCTCCTG+AGG | - | chr7_4:17581567-17581586 | None:intergenic | 45.0% |
| !! | TAAAAAAATTAAATAAAGAA+TGG | - | chr7_4:17579123-17579142 | None:intergenic | 5.0% |
| TCACGGATACTACTCGGGTT+AGG | + | chr7_4:17578799-17578818 | Msa1142810:intron | 50.0% | |
| ATGAAGCACAGCTACGGACA+CGG | - | chr7_4:17578947-17578966 | None:intergenic | 50.0% | |
| TGTCCGTAGCTGTGCTTCAT+AGG | + | chr7_4:17578947-17578966 | Msa1142810:intron | 50.0% | |
| CCACCTATGAAGCACAGCTA+CGG | - | chr7_4:17578953-17578972 | None:intergenic | 50.0% | |
| TAAGACGAGAGCCCTTCGAT+CGG | - | chr7_4:17579622-17579641 | None:intergenic | 50.0% | |
| GCTATGCAACCAACTTCTCG+GGG | - | chr7_4:17579910-17579929 | None:intergenic | 50.0% | |
| CAGACAATTGGCCAGTGACT+GGG | - | chr7_4:17580113-17580132 | None:intergenic | 50.0% | |
| TCAGACAATTGGCCAGTGAC+TGG | - | chr7_4:17580114-17580133 | None:intergenic | 50.0% | |
| GATGGGTCACAATCATGGCA+AGG | + | chr7_4:17580518-17580537 | Msa1142810:CDS | 50.0% | |
| AATGGGTCGGTCCTTTGACA+GGG | + | chr7_4:17580560-17580579 | Msa1142810:CDS | 50.0% | |
| ATTTCCATCGCCCCTGTCAA+AGG | - | chr7_4:17580574-17580593 | None:intergenic | 50.0% | |
| CTCATGCCCCATGGAATATG+AGG | - | chr7_4:17580655-17580674 | None:intergenic | 50.0% | |
| TGTAATGCTCTCATGCCCCA+TGG | - | chr7_4:17580664-17580683 | None:intergenic | 50.0% | |
| GGCTCCTTCCTATGATAAGG+TGG | + | chr7_4:17580731-17580750 | Msa1142810:CDS | 50.0% | |
| GAGTTGCCGCTGTCAAAAGA+TGG | - | chr7_4:17580780-17580799 | None:intergenic | 50.0% | |
| CCAGTGGAGTCATTCAGTTG+AGG | - | chr7_4:17580879-17580898 | None:intergenic | 50.0% | |
| CCTCAACTGAATGACTCCAC+TGG | + | chr7_4:17580876-17580895 | Msa1142810:CDS | 50.0% | |
| CAACACCTTGAGCTGAGTTC+TGG | - | chr7_4:17580935-17580954 | None:intergenic | 50.0% | |
| !! | TCAAGGTGTTGACAGCCAGA+AGG | + | chr7_4:17580944-17580963 | Msa1142810:CDS | 50.0% |
| TGAATTTGAGCGTCACGCTG+GGG | + | chr7_4:17581458-17581477 | Msa1142810:CDS | 50.0% | |
| CAGGAGCCACTATCAACCAA+AGG | + | chr7_4:17581601-17581620 | Msa1142810:CDS | 50.0% | |
| ! | TCTGATGCAAGGGTGTGCTT+GGG | - | chr7_4:17581668-17581687 | None:intergenic | 50.0% |
| ! | ATCTGATGCAAGGGTGTGCT+TGG | - | chr7_4:17581669-17581688 | None:intergenic | 50.0% |
| GAAGCTCAAGAGTAGCAGCT+TGG | - | chr7_4:17581766-17581785 | None:intergenic | 50.0% | |
| CTTGAGCTTCAGCGCATCTA+TGG | + | chr7_4:17581776-17581795 | Msa1142810:CDS | 50.0% | |
| GCTTCAGCGCATCTATGGAA+AGG | + | chr7_4:17581781-17581800 | Msa1142810:CDS | 50.0% | |
| AACGCCGGAGAATTTCCCGA+CGG | - | chr7_4:17578395-17578414 | None:intergenic | 55.0% | |
| TCCGGCGTTAGTTCCGGTTT+GGG | + | chr7_4:17578406-17578425 | Msa1142810:intron | 55.0% | |
| ! | ACAAGTTGGAGGCCCCAAAC+CGG | - | chr7_4:17578422-17578441 | None:intergenic | 55.0% |
| CACGGACATTGGACACGACA+CGG | - | chr7_4:17578929-17578948 | None:intergenic | 55.0% | |
| ACAGCTACGGACACGGACAT+TGG | - | chr7_4:17578940-17578959 | None:intergenic | 55.0% | |
| CCGTAGCTGTGCTTCATAGG+TGG | + | chr7_4:17578950-17578969 | Msa1142810:intron | 55.0% | |
| !! | TTCTGGAGTCCCCGAGAAGT+TGG | + | chr7_4:17579898-17579917 | Msa1142810:CDS | 55.0% |
| GACTGGGTGAAATCCCGAAC+TGG | - | chr7_4:17580097-17580116 | None:intergenic | 55.0% | |
| TCGGGATTTCACCCAGTCAC+TGG | + | chr7_4:17580099-17580118 | Msa1142810:CDS | 55.0% | |
| AGATGTTGAAGGGCCTCCTG+TGG | - | chr7_4:17580286-17580305 | None:intergenic | 55.0% | |
| CAATGGGTCGGTCCTTTGAC+AGG | + | chr7_4:17580559-17580578 | Msa1142810:CDS | 55.0% | |
| ATGGGTCGGTCCTTTGACAG+GGG | + | chr7_4:17580561-17580580 | Msa1142810:CDS | 55.0% | |
| GGCAACCAGAACTCAGCTCA+AGG | + | chr7_4:17580927-17580946 | Msa1142810:CDS | 55.0% | |
| GAAGGCTTCTTCGCCGTCTT+TGG | - | chr7_4:17581056-17581075 | None:intergenic | 55.0% | |
| GCCACCGTCGGGAAATTCTC+CGG | + | chr7_4:17578388-17578407 | Msa1142810:CDS | 60.0% | |
| CTCCGGCGTTAGTTCCGGTT+TGG | + | chr7_4:17578405-17578424 | Msa1142810:intron | 60.0% | |
| CCCCAAACCGGAACTAACGC+CGG | - | chr7_4:17578410-17578429 | None:intergenic | 60.0% | |
| ! | CCGGCGTTAGTTCCGGTTTG+GGG | + | chr7_4:17578407-17578426 | Msa1142810:intron | 60.0% |
| GGGAAGGCTCGGAAGACAGA+TGG | - | chr7_4:17579656-17579675 | None:intergenic | 60.0% | |
| TATCAGCTGCTGGCGTGCCA+TGG | - | chr7_4:17580362-17580381 | None:intergenic | 60.0% | |
| GCCGGAGAATTTCCCGACGG+TGG | - | chr7_4:17578392-17578411 | None:intergenic | 65.0% | |
| CGGTCCTTTGACAGGGGCGA+TGG | + | chr7_4:17580567-17580586 | Msa1142810:CDS | 65.0% | |
| ! | CAACGGCGGAGCGCCACCGT+CGG | + | chr7_4:17578376-17578395 | Msa1142810:CDS | 75.0% |
| ! | AACGGCGGAGCGCCACCGTC+GGG | + | chr7_4:17578377-17578396 | Msa1142810:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 17578347 | 17582053 | 17578347 | ID=Msa1142810;Name=Msa1142810 |
| chr7_4 | mRNA | 17578347 | 17582053 | 17578347 | ID=Msa1142810-mRNA-1;Parent=Msa1142810;Name=Msa1142810-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.75|1|1|0.75|0.8|5|233|564 |
| chr7_4 | exon | 17578347 | 17578421 | 17578347 | ID=Msa1142810-mRNA-1:exon:3907;Parent=Msa1142810-mRNA-1 |
| chr7_4 | exon | 17579880 | 17581166 | 17579880 | ID=Msa1142810-mRNA-1:exon:3908;Parent=Msa1142810-mRNA-1 |
| chr7_4 | exon | 17581260 | 17581328 | 17581260 | ID=Msa1142810-mRNA-1:exon:3909;Parent=Msa1142810-mRNA-1 |
| chr7_4 | exon | 17581444 | 17581642 | 17581444 | ID=Msa1142810-mRNA-1:exon:3910;Parent=Msa1142810-mRNA-1 |
| chr7_4 | exon | 17581756 | 17582053 | 17581756 | ID=Msa1142810-mRNA-1:exon:3911;Parent=Msa1142810-mRNA-1 |
| chr7_4 | CDS | 17578347 | 17578421 | 17578347 | ID=Msa1142810-mRNA-1:cds;Parent=Msa1142810-mRNA-1 |
| chr7_4 | CDS | 17579880 | 17581166 | 17579880 | ID=Msa1142810-mRNA-1:cds;Parent=Msa1142810-mRNA-1 |
| chr7_4 | CDS | 17581260 | 17581328 | 17581260 | ID=Msa1142810-mRNA-1:cds;Parent=Msa1142810-mRNA-1 |
| chr7_4 | CDS | 17581444 | 17581642 | 17581444 | ID=Msa1142810-mRNA-1:cds;Parent=Msa1142810-mRNA-1 |
| chr7_4 | CDS | 17581756 | 17581820 | 17581756 | ID=Msa1142810-mRNA-1:cds;Parent=Msa1142810-mRNA-1 |
| chr7_4 | three_prime_UTR | 17581821 | 17582053 | 17581821 | ID=Msa1142810-mRNA-1:three_prime_utr;Parent=Msa1142810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
