Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643020 | XP_003606383.1 | 98.246 | 285 | 5 | 0 | 1 | 285 | 1 | 285 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643020 | sp|Q9ATM4|PIP27_MAIZE | 86.063 | 287 | 38 | 2 | 1 | 285 | 1 | 287 | 0.0 | 505 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004580 | Msa0643020 | 0.806914 | 6.527476e-50 | -8.615850e-47 |
| Msa0006700 | Msa0643020 | -0.806439 | 8.221848e-50 | -8.615850e-47 |
| Msa0018470 | Msa0643020 | -0.810946 | 8.952041e-51 | -8.615850e-47 |
| Msa0021980 | Msa0643020 | -0.818997 | 1.463237e-52 | -8.615850e-47 |
| Msa0028280 | Msa0643020 | -0.820622 | 6.222077e-53 | -8.615850e-47 |
| Msa0030030 | Msa0643020 | -0.803999 | 2.665476e-49 | -8.615850e-47 |
| Msa0041780 | Msa0643020 | -0.808913 | 2.452067e-50 | -8.615850e-47 |
| Msa0049330 | Msa0643020 | -0.802342 | 5.872261e-49 | -8.615850e-47 |
| Msa0051100 | Msa0643020 | -0.846237 | 2.464055e-59 | -8.615850e-47 |
| Msa0053480 | Msa0643020 | -0.802401 | 5.708673e-49 | -8.615850e-47 |
| Msa0053960 | Msa0643020 | -0.800924 | 1.147015e-48 | -8.615850e-47 |
| Msa0055110 | Msa0643020 | 0.801971 | 7.001011e-49 | -8.615850e-47 |
| Msa0059880 | Msa0643020 | 0.810621 | 1.052230e-50 | -8.615850e-47 |
| Msa0061600 | Msa0643020 | 0.801469 | 8.872039e-49 | -8.615850e-47 |
| Msa0064550 | Msa0643020 | -0.826901 | 2.103538e-54 | -8.615850e-47 |
| Msa0070090 | Msa0643020 | -0.819898 | 9.120805e-53 | -8.615850e-47 |
| Msa0072830 | Msa0643020 | -0.809757 | 1.615956e-50 | -8.615850e-47 |
| Msa0072860 | Msa0643020 | -0.809842 | 1.549030e-50 | -8.615850e-47 |
| Msa0074780 | Msa0643020 | -0.804505 | 2.091562e-49 | -8.615850e-47 |
| Msa0096020 | Msa0643020 | -0.804233 | 2.383548e-49 | -8.615850e-47 |
| Msa0101170 | Msa0643020 | 0.806250 | 9.010823e-50 | -8.615850e-47 |
| Msa0104360 | Msa0643020 | -0.842599 | 2.343710e-58 | -8.615850e-47 |
| Msa0104390 | Msa0643020 | -0.859522 | 3.903043e-63 | -8.615850e-47 |
| Msa0109490 | Msa0643020 | -0.829965 | 3.832027e-55 | -8.615850e-47 |
| Msa0117300 | Msa0643020 | -0.805837 | 1.100884e-49 | -8.615850e-47 |
| Msa0604880 | Msa0643020 | -0.804057 | 2.592491e-49 | -8.615850e-47 |
| Msa0610360 | Msa0643020 | -0.827674 | 1.373471e-54 | -8.615850e-47 |
| Msa0621780 | Msa0643020 | -0.845494 | 3.921543e-59 | -8.615850e-47 |
| Msa0628100 | Msa0643020 | -0.821155 | 4.691771e-53 | -8.615850e-47 |
| Msa0629440 | Msa0643020 | 0.821485 | 3.938799e-53 | -8.615850e-47 |
| Msa0630850 | Msa0643020 | -0.828988 | 6.617107e-55 | -8.615850e-47 |
| Msa0639030 | Msa0643020 | -0.801557 | 8.510427e-49 | -8.615850e-47 |
| Msa0641030 | Msa0643020 | -0.807915 | 4.003170e-50 | -8.615850e-47 |
| Msa0643020 | Msa0646190 | -0.804451 | 2.146327e-49 | -8.615850e-47 |
| Msa0643020 | Msa0648200 | -0.828928 | 6.844568e-55 | -8.615850e-47 |
| Msa0643020 | Msa0648300 | -0.831225 | 1.883426e-55 | -8.615850e-47 |
| Msa0643020 | Msa0650890 | -0.831341 | 1.764043e-55 | -8.615850e-47 |
| Msa0643020 | Msa0657860 | -0.803148 | 4.002403e-49 | -8.615850e-47 |
| Msa0643020 | Msa0659300 | 0.851141 | 1.076632e-60 | -8.615850e-47 |
| Msa0643020 | Msa0665790 | -0.807607 | 4.652897e-50 | -8.615850e-47 |
| Msa0643020 | Msa0667070 | 0.803565 | 3.280892e-49 | -8.615850e-47 |
| Msa0643020 | Msa0682730 | 0.928744 | 1.872220e-92 | -8.615850e-47 |
| Msa0643020 | Msa0691140 | -0.840230 | 9.855888e-58 | -8.615850e-47 |
| Msa0643020 | Msa0697600 | -0.824003 | 1.021346e-53 | -8.615850e-47 |
| Msa0643020 | Msa0702200 | -0.801506 | 8.720343e-49 | -8.615850e-47 |
| Msa0643020 | Msa0705480 | 0.832714 | 8.075036e-56 | -8.615850e-47 |
| Msa0643020 | Msa0715510 | 0.813641 | 2.309886e-51 | -8.615850e-47 |
| Msa0643020 | Msa0722930 | -0.800502 | 1.398564e-48 | -8.615850e-47 |
| Msa0643020 | Msa0733400 | -0.803061 | 4.173203e-49 | -8.615850e-47 |
| Msa0643020 | Msa0734760 | -0.805448 | 1.328287e-49 | -8.615850e-47 |
| Msa0643020 | Msa0754350 | -0.817304 | 3.535088e-52 | -8.615850e-47 |
| Msa0643020 | Msa0773260 | -0.808104 | 3.648203e-50 | -8.615850e-47 |
| Msa0643020 | Msa0773290 | -0.806413 | 8.326434e-50 | -8.615850e-47 |
| Msa0643020 | Msa0775420 | -0.809246 | 2.080538e-50 | -8.615850e-47 |
| Msa0643020 | Msa0775580 | -0.800994 | 1.109953e-48 | -8.615850e-47 |
| Msa0643020 | Msa0776290 | -0.801299 | 9.612675e-49 | -8.615850e-47 |
| Msa0643020 | Msa0782030 | -0.814762 | 1.305839e-51 | -8.615850e-47 |
| Msa0643020 | Msa0791300 | 0.809565 | 1.776771e-50 | -8.615850e-47 |
| Msa0643020 | Msa0793060 | -0.800381 | 1.480297e-48 | -8.615850e-47 |
| Msa0643020 | Msa0795710 | -0.845848 | 3.143637e-59 | -8.615850e-47 |
| Msa0643020 | Msa0803530 | -0.810531 | 1.100725e-50 | -8.615850e-47 |
| Msa0643020 | Msa0811940 | -0.822384 | 2.438441e-53 | -8.615850e-47 |
| Msa0643020 | Msa0818580 | 0.804453 | 2.144717e-49 | -8.615850e-47 |
| Msa0643020 | Msa0819670 | -0.801882 | 7.300889e-49 | -8.615850e-47 |
| Msa0643020 | Msa0822370 | -0.833075 | 6.566210e-56 | -8.615850e-47 |
| Msa0643020 | Msa0828570 | -0.826602 | 2.479559e-54 | -8.615850e-47 |
| Msa0643020 | Msa0833450 | -0.837179 | 6.053455e-57 | -8.615850e-47 |
| Msa0643020 | Msa0835550 | -0.806536 | 7.843170e-50 | -8.615850e-47 |
| Msa0643020 | Msa0861560 | -0.835895 | 1.285362e-56 | -8.615850e-47 |
| Msa0643020 | Msa0861800 | -0.839256 | 1.766972e-57 | -8.615850e-47 |
| Msa0643020 | Msa0871310 | -0.810036 | 1.407317e-50 | -8.615850e-47 |
| Msa0643020 | Msa0887000 | -0.803812 | 2.915214e-49 | -8.615850e-47 |
| Msa0643020 | Msa0887070 | -0.818591 | 1.809559e-52 | -8.615850e-47 |
| Msa0643020 | Msa0899700 | -0.832227 | 1.065944e-55 | -8.615850e-47 |
| Msa0643020 | Msa0899730 | -0.817836 | 2.682052e-52 | -8.615850e-47 |
| Msa0643020 | Msa0910830 | 0.805493 | 1.300079e-49 | -8.615850e-47 |
| Msa0643020 | Msa0942300 | -0.824859 | 6.423341e-54 | -8.615850e-47 |
| Msa0643020 | Msa0950410 | -0.839690 | 1.362290e-57 | -8.615850e-47 |
| Msa0643020 | Msa0959610 | -0.803870 | 2.835798e-49 | -8.615850e-47 |
| Msa0643020 | Msa0964680 | -0.833404 | 5.437893e-56 | -8.615850e-47 |
| Msa0643020 | Msa0968780 | -0.802128 | 6.498210e-49 | -8.615850e-47 |
| Msa0643020 | Msa0973130 | -0.811065 | 8.436051e-51 | -8.615850e-47 |
| Msa0643020 | Msa0975560 | -0.862105 | 6.414946e-64 | -8.615850e-47 |
| Msa0643020 | Msa0984000 | -0.834500 | 2.891112e-56 | -8.615850e-47 |
| Msa0643020 | Msa0984820 | -0.805211 | 1.489297e-49 | -8.615850e-47 |
| Msa0643020 | Msa0995220 | -0.823325 | 1.471603e-53 | -8.615850e-47 |
| Msa0643020 | Msa0999590 | -0.885678 | 6.610897e-72 | -8.615850e-47 |
| Msa0643020 | Msa1012520 | 0.809822 | 1.564767e-50 | -8.615850e-47 |
| Msa0643020 | Msa1029120 | -0.802146 | 6.441658e-49 | -8.615850e-47 |
| Msa0643020 | Msa1032350 | -0.822038 | 2.933704e-53 | -8.615850e-47 |
| Msa0643020 | Msa1040730 | 0.848785 | 4.913385e-60 | -8.615850e-47 |
| Msa0643020 | Msa1052030 | -0.808547 | 2.935290e-50 | -8.615850e-47 |
| Msa0643020 | Msa1053690 | -0.819055 | 1.419667e-52 | -8.615850e-47 |
| Msa0643020 | Msa1053990 | 0.826641 | 2.426945e-54 | -8.615850e-47 |
| Msa0643020 | Msa1071310 | -0.802803 | 4.717069e-49 | -8.615850e-47 |
| Msa0643020 | Msa1072350 | -0.800236 | 1.584613e-48 | -8.615850e-47 |
| Msa0643020 | Msa1076830 | 0.803181 | 3.940867e-49 | -8.615850e-47 |
| Msa0643020 | Msa1080790 | -0.836852 | 7.337449e-57 | -8.615850e-47 |
| Msa0643020 | Msa1096510 | -0.803926 | 2.761100e-49 | -8.615850e-47 |
| Msa0643020 | Msa1108540 | 0.829539 | 4.865256e-55 | -8.615850e-47 |
| Msa0643020 | Msa1118930 | -0.841072 | 5.932050e-58 | -8.615850e-47 |
| Msa0643020 | Msa1141250 | 0.830885 | 2.282207e-55 | -8.615850e-47 |
| Msa0643020 | Msa1150190 | -0.801704 | 7.941900e-49 | -8.615850e-47 |
| Msa0643020 | Msa1150860 | 0.803897 | 2.800128e-49 | -8.615850e-47 |
| Msa0643020 | Msa1152290 | 0.823925 | 1.065023e-53 | -8.615850e-47 |
| Msa0643020 | Msa1177620 | -0.830637 | 2.625526e-55 | -8.615850e-47 |
| Msa0643020 | Msa1182800 | -0.800102 | 1.686738e-48 | -8.615850e-47 |
| Msa0643020 | Msa1182830 | -0.835308 | 1.809370e-56 | -8.615850e-47 |
| Msa0643020 | Msa1186580 | -0.807201 | 5.674658e-50 | -8.615850e-47 |
| Msa0643020 | Msa1188820 | -0.835627 | 1.502887e-56 | -8.615850e-47 |
| Msa0643020 | Msa1191390 | -0.801453 | 8.942432e-49 | -8.615850e-47 |
| Msa0643020 | Msa1194170 | 0.821173 | 4.646582e-53 | -8.615850e-47 |
| Msa0643020 | Msa1200960 | -0.812895 | 3.368335e-51 | -8.615850e-47 |
| Msa0643020 | Msa1204600 | 0.821207 | 4.563469e-53 | -8.615850e-47 |
| Msa0643020 | Msa1204770 | 0.807948 | 3.938791e-50 | -8.615850e-47 |
| Msa0643020 | Msa1209790 | -0.827634 | 1.403818e-54 | -8.615850e-47 |
| Msa0643020 | Msa1209800 | -0.812568 | 3.970239e-51 | -8.615850e-47 |
| Msa0643020 | Msa1211260 | -0.815821 | 7.595834e-52 | -8.615850e-47 |
| Msa0643020 | Msa1211300 | -0.828968 | 6.691280e-55 | -8.615850e-47 |
| Msa0643020 | Msa1211390 | -0.863523 | 2.342231e-64 | -8.615850e-47 |
| Msa0643020 | Msa1219780 | 0.807986 | 3.866550e-50 | -8.615850e-47 |
| Msa0643020 | Msa1229770 | -0.813676 | 2.268376e-51 | -8.615850e-47 |
| Msa0643020 | Msa1237260 | -0.870793 | 1.115673e-66 | -8.615850e-47 |
| Msa0643020 | Msa1240060 | 0.850031 | 2.207647e-60 | -8.615850e-47 |
| Msa0643020 | Msa1240820 | -0.808584 | 2.882128e-50 | -8.615850e-47 |
| Msa0643020 | Msa1241820 | -0.825449 | 4.658584e-54 | -8.615850e-47 |
| Msa0643020 | Msa1245120 | 0.821372 | 4.180616e-53 | -8.615850e-47 |
| Msa0643020 | Msa1278420 | -0.835483 | 1.634690e-56 | -8.615850e-47 |
| Msa0643020 | Msa1281370 | 0.845790 | 3.260711e-59 | -8.615850e-47 |
| Msa0643020 | Msa1282210 | -0.835078 | 2.068614e-56 | -8.615850e-47 |
| Msa0643020 | Msa1299370 | -0.805998 | 1.018316e-49 | -8.615850e-47 |
| Msa0643020 | Msa1302010 | 0.817987 | 2.478973e-52 | -8.615850e-47 |
| Msa0643020 | Msa1306200 | -0.834249 | 3.343642e-56 | -8.615850e-47 |
| Msa0643020 | Msa1306700 | -0.801443 | 8.983441e-49 | -8.615850e-47 |
| Msa0643020 | Msa1317710 | -0.868159 | 8.029936e-66 | -8.615850e-47 |
| Msa0643020 | Msa1320530 | 0.866299 | 3.156973e-65 | -8.615850e-47 |
| Msa0643020 | Msa1323160 | 0.812696 | 3.723918e-51 | -8.615850e-47 |
| Msa0643020 | Msa1329350 | 0.801523 | 8.648172e-49 | -8.615850e-47 |
| Msa0643020 | Msa1335970 | 0.818791 | 1.630422e-52 | -8.615850e-47 |
| Msa0643020 | Msa1342400 | -0.821285 | 4.380562e-53 | -8.615850e-47 |
| Msa0643020 | Msa1349810 | -0.808754 | 2.651535e-50 | -8.615850e-47 |
| Msa0643020 | Msa1353280 | -0.809237 | 2.089635e-50 | -8.615850e-47 |
| Msa0643020 | Msa1360380 | -0.826506 | 2.612854e-54 | -8.615850e-47 |
| Msa0643020 | Msa1363690 | 0.800452 | 1.432014e-48 | -8.615850e-47 |
| Msa0643020 | Msa1370630 | -0.867028 | 1.850675e-65 | -8.615850e-47 |
| Msa0643020 | Msa1370930 | 0.871568 | 6.188719e-67 | -8.615850e-47 |
| Msa0643020 | Msa1376070 | 0.812713 | 3.691510e-51 | -8.615850e-47 |
| Msa0643020 | Msa1380490 | 0.823234 | 1.546054e-53 | -8.615850e-47 |
| Msa0643020 | Msa1393440 | 0.814898 | 1.218217e-51 | -8.615850e-47 |
| Msa0643020 | Msa1394900 | -0.808099 | 3.657590e-50 | -8.615850e-47 |
| Msa0643020 | Msa1396550 | 0.812881 | 3.391149e-51 | -8.615850e-47 |
| Msa0643020 | Msa1403950 | -0.829598 | 4.706964e-55 | -8.615850e-47 |
| Msa0643020 | Msa1407210 | 0.803358 | 3.620790e-49 | -8.615850e-47 |
| Msa0643020 | Msa1407670 | 0.806723 | 7.161123e-50 | -8.615850e-47 |
| Msa0643020 | Msa1413900 | -0.831117 | 2.002063e-55 | -8.615850e-47 |
| Msa0643020 | Msa1415270 | -0.806352 | 8.576378e-50 | -8.615850e-47 |
| Msa0643020 | Msa1420020 | 0.821085 | 4.870537e-53 | -8.615850e-47 |
| Msa0643020 | Msa1421120 | 0.824285 | 8.769601e-54 | -8.615850e-47 |
| Msa0643020 | Msa1421870 | -0.818089 | 2.351793e-52 | -8.615850e-47 |
| Msa0643020 | Msa1424510 | -0.810021 | 1.418074e-50 | -8.615850e-47 |
| Msa0643020 | Msa1426420 | 0.807908 | 4.017425e-50 | -8.615850e-47 |
| Msa0643020 | Msa1427180 | -0.824176 | 9.301174e-54 | -8.615850e-47 |
| Msa0643020 | Msa1428440 | -0.809884 | 1.517234e-50 | -8.615850e-47 |
| Msa0643020 | Msa1432800 | -0.808108 | 3.641244e-50 | -8.615850e-47 |
| Msa0643020 | Msa1445250 | -0.810169 | 1.317533e-50 | -8.615850e-47 |
| Msa0643020 | Msa1449770 | 0.806738 | 7.108752e-50 | -8.615850e-47 |
| Msa0643020 | Msa1459540 | -0.802620 | 5.145014e-49 | -8.615850e-47 |
| Msa0643020 | Msa1459630 | -0.801498 | 8.750833e-49 | -8.615850e-47 |
| Msa0643020 | Msa1460310 | 0.839732 | 1.329148e-57 | -8.615850e-47 |
| Msa0643020 | Msa1460970 | 0.832749 | 7.913887e-56 | -8.615850e-47 |
| Msa0131090 | Msa0643020 | -0.801010 | 1.101333e-48 | -8.615850e-47 |
| Msa0153440 | Msa0643020 | -0.809428 | 1.901704e-50 | -8.615850e-47 |
| Msa0154240 | Msa0643020 | -0.843005 | 1.827442e-58 | -8.615850e-47 |
| Msa0154270 | Msa0643020 | -0.811157 | 8.054408e-51 | -8.615850e-47 |
| Msa0160650 | Msa0643020 | -0.811889 | 5.584386e-51 | -8.615850e-47 |
| Msa0183700 | Msa0643020 | 0.844467 | 7.424772e-59 | -8.615850e-47 |
| Msa0187980 | Msa0643020 | -0.804211 | 2.408513e-49 | -8.615850e-47 |
| Msa0188500 | Msa0643020 | -0.841057 | 5.986520e-58 | -8.615850e-47 |
| Msa0197730 | Msa0643020 | -0.805577 | 1.247945e-49 | -8.615850e-47 |
| Msa0198310 | Msa0643020 | -0.808022 | 3.797650e-50 | -8.615850e-47 |
| Msa0198440 | Msa0643020 | -0.848209 | 7.091108e-60 | -8.615850e-47 |
| Msa0200840 | Msa0643020 | -0.860090 | 2.631610e-63 | -8.615850e-47 |
| Msa0200870 | Msa0643020 | -0.864470 | 1.188233e-64 | -8.615850e-47 |
| Msa0203180 | Msa0643020 | -0.824554 | 7.581441e-54 | -8.615850e-47 |
| Msa0216220 | Msa0643020 | -0.815044 | 1.131023e-51 | -8.615850e-47 |
| Msa0219210 | Msa0643020 | 0.826770 | 2.260226e-54 | -8.615850e-47 |
| Msa0223190 | Msa0643020 | -0.823215 | 1.561572e-53 | -8.615850e-47 |
| Msa0224370 | Msa0643020 | -0.808340 | 3.250390e-50 | -8.615850e-47 |
| Msa0224400 | Msa0643020 | -0.813221 | 2.856104e-51 | -8.615850e-47 |
| Msa0225880 | Msa0643020 | -0.867203 | 1.627210e-65 | -8.615850e-47 |
| Msa0230980 | Msa0643020 | -0.826714 | 2.331453e-54 | -8.615850e-47 |
| Msa0232860 | Msa0643020 | -0.802276 | 6.057480e-49 | -8.615850e-47 |
| Msa0377280 | Msa0643020 | -0.847468 | 1.134359e-59 | -8.615850e-47 |
| Msa0378670 | Msa0643020 | -0.816403 | 5.631617e-52 | -8.615850e-47 |
| Msa0378700 | Msa0643020 | -0.814788 | 1.288861e-51 | -8.615850e-47 |
| Msa0379500 | Msa0643020 | -0.804698 | 1.907000e-49 | -8.615850e-47 |
| Msa0379540 | Msa0643020 | -0.800763 | 1.237412e-48 | -8.615850e-47 |
| Msa0389050 | Msa0643020 | -0.834955 | 2.221321e-56 | -8.615850e-47 |
| Msa0389060 | Msa0643020 | -0.808629 | 2.819037e-50 | -8.615850e-47 |
| Msa0404690 | Msa0643020 | -0.855107 | 7.875020e-62 | -8.615850e-47 |
| Msa0408160 | Msa0643020 | -0.802613 | 5.161849e-49 | -8.615850e-47 |
| Msa0411000 | Msa0643020 | -0.839646 | 1.398761e-57 | -8.615850e-47 |
| Msa0418430 | Msa0643020 | -0.805430 | 1.340263e-49 | -8.615850e-47 |
| Msa0419620 | Msa0643020 | 0.842589 | 2.357545e-58 | -8.615850e-47 |
| Msa0421390 | Msa0643020 | -0.814229 | 1.713327e-51 | -8.615850e-47 |
| Msa0428330 | Msa0643020 | -0.801260 | 9.791269e-49 | -8.615850e-47 |
| Msa0431520 | Msa0643020 | -0.812646 | 3.817145e-51 | -8.615850e-47 |
| Msa0431830 | Msa0643020 | -0.806619 | 7.535170e-50 | -8.615850e-47 |
| Msa0448400 | Msa0643020 | -0.804327 | 2.278336e-49 | -8.615850e-47 |
| Msa0453970 | Msa0643020 | 0.814988 | 1.163810e-51 | -8.615850e-47 |
| Msa0454940 | Msa0643020 | -0.841443 | 4.736825e-58 | -8.615850e-47 |
| Msa0455230 | Msa0643020 | -0.828313 | 9.634896e-55 | -8.615850e-47 |
| Msa0456480 | Msa0643020 | -0.809017 | 2.329647e-50 | -8.615850e-47 |
| Msa0462590 | Msa0643020 | -0.813410 | 2.595845e-51 | -8.615850e-47 |
| Msa0462980 | Msa0643020 | 0.815631 | 8.375422e-52 | -8.615850e-47 |
| Msa0475400 | Msa0643020 | -0.812411 | 4.296527e-51 | -8.615850e-47 |
| Msa0240660 | Msa0643020 | -0.805284 | 1.437804e-49 | -8.615850e-47 |
| Msa0243470 | Msa0643020 | -0.857385 | 1.691742e-62 | -8.615850e-47 |
| Msa0246300 | Msa0643020 | -0.816596 | 5.096424e-52 | -8.615850e-47 |
| Msa0253160 | Msa0643020 | -0.808780 | 2.617073e-50 | -8.615850e-47 |
| Msa0256410 | Msa0643020 | -0.808595 | 2.866714e-50 | -8.615850e-47 |
| Msa0260470 | Msa0643020 | -0.873364 | 1.556948e-67 | -8.615850e-47 |
| Msa0264240 | Msa0643020 | -0.800429 | 1.447443e-48 | -8.615850e-47 |
| Msa0264420 | Msa0643020 | -0.828871 | 7.063674e-55 | -8.615850e-47 |
| Msa0264940 | Msa0643020 | 0.837807 | 4.179555e-57 | -8.615850e-47 |
| Msa0265210 | Msa0643020 | -0.825091 | 5.661147e-54 | -8.615850e-47 |
| Msa0265980 | Msa0643020 | 0.804826 | 1.792984e-49 | -8.615850e-47 |
| Msa0270460 | Msa0643020 | -0.826990 | 2.003215e-54 | -8.615850e-47 |
| Msa0278670 | Msa0643020 | -0.853694 | 2.017404e-61 | -8.615850e-47 |
| Msa0281940 | Msa0643020 | -0.853211 | 2.775543e-61 | -8.615850e-47 |
| Msa0284870 | Msa0643020 | -0.811360 | 7.280654e-51 | -8.615850e-47 |
| Msa0291940 | Msa0643020 | -0.803380 | 3.584000e-49 | -8.615850e-47 |
| Msa0298270 | Msa0643020 | 0.830191 | 3.374639e-55 | -8.615850e-47 |
| Msa0302310 | Msa0643020 | -0.805585 | 1.243285e-49 | -8.615850e-47 |
| Msa0302990 | Msa0643020 | 0.840626 | 7.764876e-58 | -8.615850e-47 |
| Msa0303200 | Msa0643020 | -0.808646 | 2.795601e-50 | -8.615850e-47 |
| Msa0303500 | Msa0643020 | -0.801079 | 1.066446e-48 | -8.615850e-47 |
| Msa0304110 | Msa0643020 | -0.864772 | 9.558468e-65 | -8.615850e-47 |
| Msa0318070 | Msa0643020 | -0.855749 | 5.118160e-62 | -8.615850e-47 |
| Msa0318260 | Msa0643020 | -0.809653 | 1.701318e-50 | -8.615850e-47 |
| Msa0318480 | Msa0643020 | -0.809792 | 1.588077e-50 | -8.615850e-47 |
| Msa0319690 | Msa0643020 | 0.820132 | 8.061586e-53 | -8.615850e-47 |
| Msa0323630 | Msa0643020 | -0.814779 | 1.294874e-51 | -8.615850e-47 |
| Msa0339560 | Msa0643020 | -0.810628 | 1.048772e-50 | -8.615850e-47 |
| Msa0339670 | Msa0643020 | -0.821077 | 4.891913e-53 | -8.615850e-47 |
| Msa0340550 | Msa0643020 | -0.810782 | 9.712262e-51 | -8.615850e-47 |
| Msa0341190 | Msa0643020 | -0.860848 | 1.551745e-63 | -8.615850e-47 |
| Msa0343370 | Msa0643020 | -0.805861 | 1.088062e-49 | -8.615850e-47 |
| Msa0352640 | Msa0643020 | -0.825820 | 3.806038e-54 | -8.615850e-47 |
| Msa0362430 | Msa0643020 | -0.841845 | 3.711387e-58 | -8.615850e-47 |
| Msa0363460 | Msa0643020 | -0.822455 | 2.347025e-53 | -8.615850e-47 |
| Msa0491760 | Msa0643020 | 0.824531 | 7.676587e-54 | -8.615850e-47 |
| Msa0496460 | Msa0643020 | -0.822760 | 1.993212e-53 | -8.615850e-47 |
| Msa0502910 | Msa0643020 | -0.829798 | 4.207930e-55 | -8.615850e-47 |
| Msa0508580 | Msa0643020 | 0.802648 | 5.077444e-49 | -8.615850e-47 |
| Msa0511720 | Msa0643020 | 0.810233 | 1.276499e-50 | -8.615850e-47 |
| Msa0521940 | Msa0643020 | 0.826535 | 2.572134e-54 | -8.615850e-47 |
| Msa0530950 | Msa0643020 | -0.818278 | 2.131154e-52 | -8.615850e-47 |
| Msa0545230 | Msa0643020 | -0.820194 | 7.802913e-53 | -8.615850e-47 |
| Msa0546370 | Msa0643020 | -0.807306 | 5.392107e-50 | -8.615850e-47 |
| Msa0547200 | Msa0643020 | 0.957346 | 3.388140e-115 | -8.615850e-47 |
| Msa0554440 | Msa0643020 | -0.803419 | 3.518034e-49 | -8.615850e-47 |
| Msa0555960 | Msa0643020 | -0.817977 | 2.492750e-52 | -8.615850e-47 |
| Msa0558710 | Msa0643020 | -0.815303 | 9.904502e-52 | -8.615850e-47 |
| Msa0560370 | Msa0643020 | -0.802157 | 6.409317e-49 | -8.615850e-47 |
| Msa0563140 | Msa0643020 | -0.805617 | 1.224216e-49 | -8.615850e-47 |
| Msa0566010 | Msa0643020 | -0.801360 | 9.340146e-49 | -8.615850e-47 |
| Msa0576600 | Msa0643020 | -0.800815 | 1.207198e-48 | -8.615850e-47 |
| Msa0580540 | Msa0643020 | -0.842092 | 3.193579e-58 | -8.615850e-47 |
| Msa0589610 | Msa0643020 | -0.808950 | 2.407735e-50 | -8.615850e-47 |
| Msa0600820 | Msa0643020 | -0.849007 | 4.261045e-60 | -8.615850e-47 |
| Msa0601920 | Msa0643020 | 0.967276 | 4.699941e-127 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643020 | MtrunA17_Chr4g0029071 | 98.246 | 285 | 5 | 0 | 1 | 285 | 1 | 285 | 0.0 | 571 |
| Msa0643020 | MtrunA17_Chr2g0326621 | 85.017 | 287 | 41 | 2 | 1 | 285 | 1 | 287 | 1.04e-180 | 499 |
| Msa0643020 | MtrunA17_Chr1g0199731 | 83.099 | 284 | 48 | 0 | 1 | 284 | 1 | 284 | 1.14e-177 | 491 |
| Msa0643020 | MtrunA17_Chr7g0264111 | 80.702 | 285 | 55 | 0 | 1 | 285 | 1 | 285 | 1.68e-173 | 480 |
| Msa0643020 | MtrunA17_Chr3g0145671 | 77.695 | 269 | 54 | 1 | 16 | 284 | 14 | 276 | 1.19e-155 | 435 |
| Msa0643020 | MtrunA17_Chr8g0386961 | 67.293 | 266 | 80 | 2 | 12 | 276 | 25 | 284 | 5.56e-132 | 375 |
| Msa0643020 | MtrunA17_Chr5g0436701 | 68.015 | 272 | 80 | 3 | 7 | 277 | 23 | 288 | 3.91e-131 | 373 |
| Msa0643020 | MtrunA17_Chr5g0397391 | 68.165 | 267 | 78 | 2 | 12 | 277 | 25 | 285 | 5.78e-131 | 373 |
| Msa0643020 | MtrunA17_Chr4g0006001 | 66.171 | 269 | 85 | 1 | 9 | 277 | 26 | 288 | 9.60e-131 | 372 |
| Msa0643020 | MtrunA17_Chr3g0113211 | 65.217 | 276 | 89 | 2 | 3 | 277 | 19 | 288 | 2.14e-130 | 371 |
| Msa0643020 | MtrunA17_Chr2g0331261 | 38.494 | 239 | 125 | 6 | 39 | 273 | 20 | 240 | 2.74e-39 | 137 |
| Msa0643020 | MtrunA17_Chr8g0340161 | 39.224 | 232 | 119 | 6 | 39 | 266 | 19 | 232 | 2.84e-36 | 130 |
| Msa0643020 | MtrunA17_Chr5g0399341 | 37.712 | 236 | 130 | 5 | 39 | 273 | 19 | 238 | 8.06e-35 | 126 |
| Msa0643020 | MtrunA17_Chr1g0188771 | 36.052 | 233 | 133 | 6 | 39 | 270 | 21 | 238 | 3.01e-32 | 119 |
| Msa0643020 | MtrunA17_Chr7g0264961 | 33.600 | 250 | 149 | 6 | 30 | 278 | 12 | 245 | 9.53e-32 | 118 |
| Msa0643020 | MtrunA17_Chr1g0212671 | 35.366 | 246 | 135 | 7 | 30 | 270 | 12 | 238 | 2.13e-31 | 117 |
| Msa0643020 | MtrunA17_Chr4g0030861 | 33.610 | 241 | 135 | 7 | 44 | 278 | 26 | 247 | 1.96e-30 | 114 |
| Msa0643020 | MtrunA17_Chr6g0478191 | 36.179 | 246 | 135 | 6 | 29 | 270 | 11 | 238 | 3.47e-30 | 114 |
| Msa0643020 | MtrunA17_Chr1g0146171 | 33.462 | 260 | 134 | 11 | 30 | 278 | 10 | 241 | 2.70e-29 | 111 |
| Msa0643020 | MtrunA17_Chr1g0146161 | 34.263 | 251 | 130 | 11 | 30 | 271 | 10 | 234 | 3.33e-28 | 108 |
| Msa0643020 | MtrunA17_Chr7g0222791 | 34.728 | 239 | 132 | 7 | 39 | 272 | 21 | 240 | 3.69e-27 | 106 |
| Msa0643020 | MtrunA17_Chr4g0020781 | 37.778 | 180 | 95 | 5 | 94 | 270 | 30 | 195 | 1.83e-20 | 87.4 |
| Msa0643020 | MtrunA17_Chr5g0435051 | 30.208 | 192 | 114 | 5 | 82 | 269 | 73 | 248 | 2.08e-19 | 85.5 |
| Msa0643020 | MtrunA17_Chr8g0379901 | 30.222 | 225 | 132 | 7 | 37 | 259 | 37 | 238 | 4.51e-19 | 84.7 |
| Msa0643020 | MtrunA17_Chr4g0038591 | 26.641 | 259 | 156 | 8 | 22 | 259 | 27 | 272 | 6.99e-18 | 82.4 |
| Msa0643020 | MtrunA17_Chr5g0426131 | 29.381 | 194 | 124 | 4 | 78 | 269 | 65 | 247 | 1.08e-17 | 80.9 |
| Msa0643020 | MtrunA17_Chr2g0284631 | 29.487 | 234 | 138 | 7 | 39 | 269 | 91 | 300 | 4.57e-17 | 80.1 |
| Msa0643020 | MtrunA17_Chr3g0079421 | 28.646 | 192 | 117 | 5 | 82 | 269 | 59 | 234 | 2.75e-16 | 77.0 |
| Msa0643020 | MtrunA17_Chr8g0379911 | 28.452 | 239 | 143 | 7 | 36 | 271 | 35 | 248 | 5.98e-16 | 75.9 |
| Msa0643020 | MtrunA17_Chr2g0333771 | 28.899 | 218 | 131 | 7 | 43 | 259 | 84 | 278 | 1.31e-15 | 75.5 |
| Msa0643020 | MtrunA17_Chr4g0038611 | 27.962 | 211 | 127 | 7 | 63 | 261 | 14 | 211 | 1.52e-15 | 74.7 |
| Msa0643020 | MtrunA17_Chr7g0217331 | 27.753 | 227 | 134 | 6 | 37 | 259 | 35 | 235 | 2.03e-15 | 74.7 |
| Msa0643020 | MtrunA17_Chr4g0001221 | 27.206 | 272 | 153 | 9 | 21 | 282 | 68 | 304 | 2.09e-15 | 75.1 |
| Msa0643020 | MtrunA17_Chr2g0284611 | 28.444 | 225 | 136 | 6 | 37 | 259 | 36 | 237 | 6.47e-15 | 73.2 |
| Msa0643020 | MtrunA17_Chr2g0284591 | 29.412 | 238 | 140 | 8 | 37 | 271 | 34 | 246 | 1.03e-14 | 72.4 |
| Msa0643020 | MtrunA17_Chr4g0044201 | 29.670 | 182 | 95 | 5 | 82 | 259 | 71 | 223 | 2.30e-14 | 71.2 |
| Msa0643020 | MtrunA17_Chr2g0284601 | 30.928 | 194 | 113 | 7 | 82 | 271 | 24 | 200 | 1.52e-13 | 68.6 |
| Msa0643020 | MtrunA17_Chr1g0201331 | 26.506 | 249 | 160 | 7 | 36 | 283 | 71 | 297 | 2.26e-13 | 68.9 |
| Msa0643020 | MtrunA17_Chr2g0284581 | 29.534 | 193 | 117 | 6 | 82 | 271 | 72 | 248 | 3.64e-13 | 68.2 |
| Msa0643020 | MtrunA17_Chr1g0184541 | 25.833 | 240 | 147 | 7 | 36 | 271 | 59 | 271 | 3.60e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643020 | AT2G37170.2 | 79.649 | 285 | 56 | 1 | 1 | 285 | 44 | 326 | 1.36e-168 | 470 |
| Msa0643020 | AT5G60660.1 | 79.152 | 283 | 59 | 0 | 1 | 283 | 1 | 283 | 1.49e-168 | 468 |
| Msa0643020 | AT2G37170.1 | 79.649 | 285 | 56 | 1 | 1 | 285 | 1 | 283 | 5.68e-168 | 467 |
| Msa0643020 | AT2G37180.1 | 78.596 | 285 | 59 | 1 | 1 | 285 | 1 | 283 | 3.94e-165 | 459 |
| Msa0643020 | AT3G53420.1 | 77.895 | 285 | 63 | 0 | 1 | 285 | 1 | 285 | 1.19e-163 | 456 |
| Msa0643020 | AT3G53420.2 | 77.895 | 285 | 63 | 0 | 1 | 285 | 1 | 285 | 1.19e-163 | 456 |
| Msa0643020 | AT4G35100.1 | 77.224 | 281 | 57 | 2 | 6 | 285 | 4 | 278 | 4.69e-159 | 444 |
| Msa0643020 | AT4G35100.2 | 77.224 | 281 | 57 | 2 | 6 | 285 | 4 | 278 | 4.69e-159 | 444 |
| Msa0643020 | AT2G39010.1 | 74.296 | 284 | 72 | 1 | 1 | 284 | 1 | 283 | 1.01e-158 | 443 |
| Msa0643020 | AT3G54820.1 | 74.648 | 284 | 71 | 1 | 1 | 284 | 1 | 283 | 4.32e-158 | 442 |
| Msa0643020 | AT2G16850.1 | 76.344 | 279 | 59 | 2 | 6 | 284 | 4 | 275 | 5.22e-155 | 434 |
| Msa0643020 | AT4G00430.1 | 67.897 | 271 | 81 | 1 | 7 | 277 | 21 | 285 | 9.60e-133 | 377 |
| Msa0643020 | AT2G45960.1 | 68.182 | 264 | 78 | 1 | 14 | 277 | 27 | 284 | 3.23e-130 | 371 |
| Msa0643020 | AT4G23400.1 | 67.669 | 266 | 80 | 1 | 12 | 277 | 26 | 285 | 3.85e-124 | 356 |
| Msa0643020 | AT1G01620.1 | 69.084 | 262 | 75 | 1 | 16 | 277 | 29 | 284 | 5.58e-124 | 355 |
| Msa0643020 | AT3G61430.2 | 67.424 | 264 | 80 | 1 | 14 | 277 | 27 | 284 | 2.01e-122 | 351 |
| Msa0643020 | AT3G61430.1 | 67.424 | 264 | 80 | 1 | 14 | 277 | 27 | 284 | 2.01e-122 | 351 |
| Msa0643020 | AT2G45960.2 | 70.213 | 235 | 64 | 1 | 14 | 248 | 27 | 255 | 3.02e-117 | 338 |
| Msa0643020 | AT2G45960.3 | 70.213 | 235 | 64 | 1 | 14 | 248 | 27 | 255 | 3.88e-116 | 336 |
| Msa0643020 | AT1G01620.2 | 73.892 | 203 | 53 | 0 | 75 | 277 | 10 | 212 | 2.31e-107 | 310 |
| Msa0643020 | AT2G39010.2 | 72.772 | 202 | 54 | 1 | 1 | 202 | 1 | 201 | 4.97e-106 | 307 |
| Msa0643020 | AT4G00430.2 | 67.692 | 195 | 57 | 1 | 12 | 206 | 26 | 214 | 7.05e-90 | 266 |
| Msa0643020 | AT3G16240.1 | 39.669 | 242 | 120 | 7 | 39 | 274 | 19 | 240 | 5.42e-37 | 132 |
| Msa0643020 | AT5G47450.1 | 37.959 | 245 | 124 | 7 | 36 | 273 | 16 | 239 | 4.68e-36 | 129 |
| Msa0643020 | AT3G26520.1 | 35.510 | 245 | 136 | 8 | 30 | 270 | 13 | 239 | 4.94e-33 | 122 |
| Msa0643020 | AT1G73190.1 | 36.290 | 248 | 135 | 7 | 30 | 270 | 15 | 246 | 1.09e-32 | 121 |
| Msa0643020 | AT4G17340.1 | 36.842 | 247 | 118 | 7 | 39 | 273 | 19 | 239 | 2.88e-32 | 119 |
| Msa0643020 | AT4G01470.1 | 34.677 | 248 | 138 | 6 | 31 | 273 | 13 | 241 | 8.76e-32 | 118 |
| Msa0643020 | AT1G17810.1 | 35.484 | 248 | 137 | 7 | 30 | 270 | 15 | 246 | 5.15e-31 | 117 |
| Msa0643020 | AT2G36830.1 | 34.156 | 243 | 136 | 7 | 30 | 267 | 12 | 235 | 1.24e-30 | 115 |
| Msa0643020 | AT2G25810.1 | 35.081 | 248 | 129 | 11 | 30 | 270 | 10 | 232 | 3.27e-26 | 103 |
| Msa0643020 | AT3G47440.1 | 31.780 | 236 | 138 | 7 | 39 | 270 | 23 | 239 | 4.34e-24 | 98.6 |
| Msa0643020 | AT4G19030.1 | 28.030 | 264 | 159 | 8 | 3 | 259 | 22 | 261 | 3.53e-17 | 80.1 |
| Msa0643020 | AT1G31885.1 | 28.794 | 257 | 148 | 8 | 24 | 273 | 34 | 262 | 4.11e-17 | 80.5 |
| Msa0643020 | AT5G37820.1 | 28.571 | 189 | 121 | 4 | 82 | 269 | 77 | 252 | 7.07e-15 | 73.6 |
| Msa0643020 | AT5G37810.1 | 27.128 | 188 | 125 | 3 | 82 | 269 | 77 | 252 | 8.51e-15 | 73.2 |
| Msa0643020 | AT5G37820.2 | 28.571 | 189 | 121 | 4 | 82 | 269 | 113 | 288 | 1.06e-14 | 73.6 |
| Msa0643020 | AT1G31885.2 | 29.557 | 203 | 123 | 6 | 78 | 273 | 19 | 208 | 4.83e-14 | 70.9 |
| Msa0643020 | AT2G34390.1 | 26.616 | 263 | 155 | 10 | 15 | 269 | 31 | 263 | 5.35e-14 | 71.2 |
| Msa0643020 | AT4G10380.1 | 26.877 | 253 | 155 | 9 | 36 | 282 | 75 | 303 | 7.43e-14 | 70.9 |
| Msa0643020 | AT2G34390.2 | 28.141 | 199 | 123 | 5 | 78 | 269 | 36 | 221 | 1.85e-13 | 68.9 |
| Msa0643020 | AT3G06100.1 | 28.205 | 234 | 141 | 8 | 39 | 269 | 46 | 255 | 4.58e-12 | 65.5 |
| Msa0643020 | AT4G18910.1 | 25.483 | 259 | 171 | 6 | 5 | 259 | 18 | 258 | 6.55e-12 | 65.1 |
| Msa0643020 | AT3G06100.2 | 29.185 | 233 | 134 | 10 | 42 | 269 | 1 | 207 | 7.78e-11 | 61.2 |
Find 121 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGATTATGATTAAATTTC+TGG | 0.072594 | 4_3:+45418090 | Msa0643020:three_prime_UTR |
| TTGGGTATTGCTTGGGCTTT+TGG | 0.189425 | 4_3:+45415787 | Msa0643020:CDS |
| CTGTGATGGTGTTGGAATTT+TGG | 0.191069 | 4_3:+45415768 | Msa0643020:CDS |
| TCTACAATGACGGCAAAATT+TGG | 0.226952 | 4_3:+45416694 | Msa0643020:CDS |
| GAGTCCCTAGCGTTTCTCTT+AGG | 0.240191 | 4_3:-45416449 | None:intergenic |
| GAAGGATCCAAGAGCTTTAA+TGG | 0.276736 | 4_3:-45417606 | None:intergenic |
| ACTCTTCAACATTATTCTTT+TGG | 0.296879 | 4_3:-45417701 | None:intergenic |
| GCTGCAACTGCAGTGGGGTT+TGG | 0.298902 | 4_3:+45417770 | Msa0643020:three_prime_UTR |
| GTGATGAACAGTGGATATTC+TGG | 0.300046 | 4_3:+45417519 | Msa0643020:intron |
| ATCAACCCTGCCGTGACATT+CGG | 0.320599 | 4_3:+45416194 | Msa0643020:CDS |
| ATTTCATGGTCCCTTGTTAT+TGG | 0.323317 | 4_3:-45417804 | None:intergenic |
| ATTAACCCGGCAAGAAGTTT+CGG | 0.346372 | 4_3:+45416660 | Msa0643020:CDS |
| TTCTGGGTTGGTCCAATGAT+TGG | 0.360668 | 4_3:+45417536 | Msa0643020:CDS |
| AAAGCATACTTTGACAGATA+TGG | 0.361824 | 4_3:+45416320 | Msa0643020:CDS |
| TTAATACCGGTGCCGGTAAT+GGG | 0.367427 | 4_3:-45416642 | None:intergenic |
| GTAGTGGATTGAATTGAGTA+TGG | 0.369597 | 4_3:-45415482 | None:intergenic |
| CATGGTTATCTACAATTTCA+TGG | 0.370052 | 4_3:-45417818 | None:intergenic |
| TAAAAGAGAACTAAGCAATA+TGG | 0.374922 | 4_3:+45415528 | Msa0643020:exon |
| TTAAAGCTCTTGGATCCTTC+AGG | 0.374939 | 4_3:+45417609 | Msa0643020:CDS |
| CAGTCAGTACCACCAGCTTT+AGG | 0.379125 | 4_3:-45415748 | None:intergenic |
| ACGGAAGGTGTCCTTGATTA+GGG | 0.379672 | 4_3:+45416229 | Msa0643020:CDS |
| GACGGAAGGTGTCCTTGATT+AGG | 0.381530 | 4_3:+45416228 | Msa0643020:CDS |
| TACAACAAAGGCACAGCTTT+GGG | 0.390836 | 4_3:+45416371 | Msa0643020:CDS |
| ACAAGGATGGAAGATAAATA+TGG | 0.392238 | 4_3:-45417985 | None:intergenic |
| TACTGTACCGCCGGTATCTC+TGG | 0.392587 | 4_3:+45415832 | Msa0643020:CDS |
| GCTGATCCGAAACTTCTTGC+CGG | 0.395043 | 4_3:-45416666 | None:intergenic |
| GCCACAGCAGCTCCAATCAT+TGG | 0.399751 | 4_3:-45417548 | None:intergenic |
| AGTCCCTAGCGTTTCTCTTA+GGG | 0.401907 | 4_3:-45416448 | None:intergenic |
| CTACAATGACGGCAAAATTT+GGG | 0.403017 | 4_3:+45416695 | Msa0643020:CDS |
| CACTGCAGTTGCAGCTGAAA+AGG | 0.408278 | 4_3:-45417762 | None:intergenic |
| TGGTCAAAACAGTGACATAA+AGG | 0.409034 | 4_3:-45415699 | None:intergenic |
| GGTTCAGCCATTAAAGCTCT+TGG | 0.411321 | 4_3:+45417599 | Msa0643020:CDS |
| TCAACCCTGCCGTGACATTC+GGG | 0.414133 | 4_3:+45416195 | Msa0643020:CDS |
| GTTAATACCGGTGCCGGTAA+TGG | 0.415684 | 4_3:-45416643 | None:intergenic |
| ATGATTGGAGCTGCTGTGGC+TGG | 0.418679 | 4_3:+45417551 | Msa0643020:CDS |
| CGGCAAAATTTGGGATGATC+AGG | 0.427962 | 4_3:+45416704 | Msa0643020:CDS |
| TTGGAAACCTTTGGCAAGTC+CGG | 0.439461 | 4_3:-45416297 | None:intergenic |
| TCTATCAATGGTGCTGGAGG+TGG | 0.446868 | 4_3:-45415607 | None:intergenic |
| CTACAACAAAGGCACAGCTT+TGG | 0.447010 | 4_3:+45416370 | Msa0643020:CDS |
| TTGGCTACTATCCCCATTAC+CGG | 0.452301 | 4_3:+45416630 | Msa0643020:CDS |
| CAAATTAAGTGGTCCTATCC+TGG | 0.455671 | 4_3:+45417725 | Msa0643020:three_prime_UTR |
| ATAACCATGCTTGTGTTTCA+AGG | 0.457885 | 4_3:+45417832 | Msa0643020:three_prime_UTR |
| ACTTCTTGCCGGGTTAATAC+CGG | 0.464164 | 4_3:-45416655 | None:intergenic |
| ATTCATGATGGCTACAACAA+AGG | 0.473294 | 4_3:+45416359 | Msa0643020:CDS |
| TGATGAACAGTGGATATTCT+GGG | 0.485567 | 4_3:+45417520 | Msa0643020:intron |
| CTGAACCTCTTAGAATGTAT+TGG | 0.489928 | 4_3:-45417583 | None:intergenic |
| TACATGGCAGCACAGTGTGC+CGG | 0.490463 | 4_3:+45416260 | Msa0643020:CDS |
| CTGATCCGAAACTTCTTGCC+GGG | 0.491559 | 4_3:-45416665 | None:intergenic |
| CTGAAAAGGAAAAGACGAAA+AGG | 0.494274 | 4_3:-45417748 | None:intergenic |
| CTGGTGGCTATAACCAATAA+TGG | 0.500618 | 4_3:-45415719 | None:intergenic |
| GCAACTGCAGTGGGGTTTGG+AGG | 0.503181 | 4_3:+45417773 | Msa0643020:three_prime_UTR |
| AATTAACATCATAGCTTGGT+TGG | 0.506194 | 4_3:-45417675 | None:intergenic |
| GAGAAATTAACATCATAGCT+TGG | 0.506683 | 4_3:-45417679 | None:intergenic |
| GTTGAAGAGTGCAAATTAAG+TGG | 0.512272 | 4_3:+45417714 | Msa0643020:three_prime_UTR |
| TGCCGGGTTAATACCGGTGC+CGG | 0.514335 | 4_3:-45416649 | None:intergenic |
| GCCGGCGCAATCTGTGGTAC+CGG | 0.516181 | 4_3:+45416278 | Msa0643020:CDS |
| CGTGACATTCGGGCTATTCG+TGG | 0.516571 | 4_3:+45416205 | Msa0643020:CDS |
| ATCCTTGTTTACTGTACCGC+CGG | 0.520735 | 4_3:+45415823 | Msa0643020:CDS |
| AACTCCTCAACATCTATCAA+TGG | 0.521123 | 4_3:-45415619 | None:intergenic |
| TCAACATCTATCAATGGTGC+TGG | 0.524124 | 4_3:-45415613 | None:intergenic |
| AAGAGAAATTTGAAAATGAA+AGG | 0.525243 | 4_3:-45417950 | None:intergenic |
| GTAAAACACTGCCCTAATCA+AGG | 0.525985 | 4_3:-45416240 | None:intergenic |
| TACCACCAATACATTCTAAG+AGG | 0.529657 | 4_3:+45417578 | Msa0643020:CDS |
| AAAGACGAAAAGGCCAGGAT+AGG | 0.530432 | 4_3:-45417738 | None:intergenic |
| TCCAATGATTGGAGCTGCTG+TGG | 0.531304 | 4_3:+45417547 | Msa0643020:CDS |
| GTAGCCATCATGAATAAAGT+TGG | 0.531597 | 4_3:-45416351 | None:intergenic |
| TAACCATGCTTGTGTTTCAA+GGG | 0.531821 | 4_3:+45417833 | Msa0643020:three_prime_UTR |
| GCTTTGGGTGCTGAAATCAT+TGG | 0.533586 | 4_3:+45416386 | Msa0643020:CDS |
| GGTGCCAACTTTATTCATGA+TGG | 0.535166 | 4_3:+45416347 | Msa0643020:CDS |
| TTATAGCATACCAGAGATAC+CGG | 0.539251 | 4_3:-45415842 | None:intergenic |
| TAGGAATTGAATACATACAT+TGG | 0.552401 | 4_3:-45417898 | None:intergenic |
| CTATCAATGGTGCTGGAGGT+GGG | 0.552912 | 4_3:-45415606 | None:intergenic |
| AATAGCCCGAATGTCACGGC+AGG | 0.553742 | 4_3:-45416200 | None:intergenic |
| ATGAAAACAGCAAATCCAAT+GGG | 0.555341 | 4_3:-45416600 | None:intergenic |
| CACCAGTCTGATCCTAAAGC+TGG | 0.557436 | 4_3:+45415736 | Msa0643020:CDS |
| TAATTAAGCATTGCTCCTGA+AGG | 0.559103 | 4_3:-45417624 | None:intergenic |
| TTTCAAAAGTGGGAGAGTAG+TGG | 0.561328 | 4_3:-45415498 | None:intergenic |
| AACCTCTTAGAATGTATTGG+TGG | 0.561973 | 4_3:-45417580 | None:intergenic |
| CGGGCTATTCGTGGGACGGA+AGG | 0.562748 | 4_3:+45416214 | Msa0643020:CDS |
| TTTGCCGTCATTGTAGATCA+CGG | 0.565178 | 4_3:-45416688 | None:intergenic |
| ACTATCCCCATTACCGGCAC+CGG | 0.571652 | 4_3:+45416636 | Msa0643020:CDS |
| GGTACTGACTGTGATGGTGT+TGG | 0.572709 | 4_3:+45415760 | Msa0643020:CDS |
| ACAGCAAATCCAATGGGAAG+TGG | 0.574194 | 4_3:-45416594 | None:intergenic |
| AGCACCATTGATAGATGTTG+AGG | 0.575497 | 4_3:+45415615 | Msa0643020:CDS |
| AAGGAAAAGACGAAAAGGCC+AGG | 0.575632 | 4_3:-45417743 | None:intergenic |
| GATGTTGAGGTTCAAGAACA+AGG | 0.576725 | 4_3:+45415556 | Msa0643020:CDS |
| CAGTGTGCCGGCGCAATCTG+TGG | 0.577018 | 4_3:+45416272 | Msa0643020:CDS |
| CACGAATAGCCCGAATGTCA+CGG | 0.582521 | 4_3:-45416204 | None:intergenic |
| ATTATATGCTTACAGGAACA+TGG | 0.583004 | 4_3:-45416472 | None:intergenic |
| TACGAAATTCACAACAAGGA+TGG | 0.583292 | 4_3:-45417998 | None:intergenic |
| CAATATGGCTAAAGATGTTG+AGG | 0.583700 | 4_3:+45415543 | Msa0643020:exon |
| ACATCTATCAATGGTGCTGG+AGG | 0.589837 | 4_3:-45415610 | None:intergenic |
| TACCGGCACCGGTATTAACC+CGG | 0.590468 | 4_3:+45416647 | Msa0643020:CDS |
| TAATACCGGTGCCGGTAATG+GGG | 0.593819 | 4_3:-45416641 | None:intergenic |
| TGTGGTACCGGACTTGCCAA+AGG | 0.598591 | 4_3:+45416290 | Msa0643020:CDS |
| CATGAAAACAGCAAATCCAA+TGG | 0.600094 | 4_3:-45416601 | None:intergenic |
| AGTATGGTTTGAGTAGAATG+AGG | 0.605313 | 4_3:-45415466 | None:intergenic |
| TACTTTGACAGATATGGAGG+TGG | 0.607215 | 4_3:+45416326 | Msa0643020:CDS |
| GTGACATTCGGGCTATTCGT+GGG | 0.608893 | 4_3:+45416206 | Msa0643020:CDS |
| CACCAGCTTTAGGATCAGAC+TGG | 0.622507 | 4_3:-45415738 | None:intergenic |
| CTGACCCTAAGAGAAACGCT+AGG | 0.623716 | 4_3:+45416444 | Msa0643020:CDS |
| TCCGGTACCACAGATTGCGC+CGG | 0.626783 | 4_3:-45416279 | None:intergenic |
| AGAAATTAAAGTGAACACAT+AGG | 0.628241 | 4_3:-45417917 | None:intergenic |
| GACAGTGTAGACAAGAACAA+AGG | 0.629321 | 4_3:-45416411 | None:intergenic |
| ATGGTTTGAGTAGAATGAGG+TGG | 0.633776 | 4_3:-45415463 | None:intergenic |
| GCATACTTTGACAGATATGG+AGG | 0.633916 | 4_3:+45416323 | Msa0643020:CDS |
| CATTCGGGCTATTCGTGGGA+CGG | 0.637960 | 4_3:+45416210 | Msa0643020:CDS |
| TTGATACGAAATTCACAACA+AGG | 0.639033 | 4_3:-45418002 | None:intergenic |
| TTATATGCTTACAGGAACAT+GGG | 0.643732 | 4_3:-45416471 | None:intergenic |
| TACCGGCGGTACAGTAAACA+AGG | 0.644037 | 4_3:-45415825 | None:intergenic |
| CAGTCTGATCCTAAAGCTGG+TGG | 0.645930 | 4_3:+45415739 | Msa0643020:CDS |
| TGACCCTAAGAGAAACGCTA+GGG | 0.652651 | 4_3:+45416445 | Msa0643020:CDS |
| GCTGGTGGTACTGACTGTGA+TGG | 0.654915 | 4_3:+45415754 | Msa0643020:CDS |
| TTTCAGCTGCAACTGCAGTG+GGG | 0.659904 | 4_3:+45417765 | Msa0643020:three_prime_UTR |
| GAACAGTGGATATTCTGGGT+TGG | 0.667916 | 4_3:+45417524 | Msa0643020:intron |
| ACACCCTTGAAACACAAGCA+TGG | 0.669719 | 4_3:-45417836 | None:intergenic |
| CAGCTTTAGGATCAGACTGG+TGG | 0.671442 | 4_3:-45415735 | None:intergenic |
| ATAGCCCGAATGTCACGGCA+GGG | 0.681726 | 4_3:-45416199 | None:intergenic |
| TCAGCCGTGATCTACAATGA+CGG | 0.682863 | 4_3:+45416684 | Msa0643020:CDS |
| ATGTTGAGGAGTTAACAAAG+TGG | 0.737517 | 4_3:+45415629 | Msa0643020:CDS |
| TAGCATACCAGAGATACCGG+CGG | 0.780077 | 4_3:-45415839 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAACATAATTAATTATA+TGG | - | chr4_3:45416737-45416756 | None:intergenic | 10.0% |
| !!! | CATATAATTAATTATGTTTT+TGG | + | chr4_3:45416735-45416754 | Msa0643020:intron | 10.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | + | chr4_3:45417115-45417134 | Msa0643020:intron | 10.0% |
| !!! | ATAAGTAAATTTTTTTTTGT+AGG | + | chr4_3:45417176-45417195 | Msa0643020:intron | 10.0% |
| !!! | TAAGTAAATTTTTTTTTGTA+GGG | + | chr4_3:45417177-45417196 | Msa0643020:intron | 10.0% |
| !! | CACTTTAATTAATAATTTAA+GGG | - | chr4_3:45417280-45417299 | None:intergenic | 10.0% |
| !! | TCACTTTAATTAATAATTTA+AGG | - | chr4_3:45417281-45417300 | None:intergenic | 10.0% |
| !! | TGATAAAATACAAACAAATA+TGG | - | chr4_3:45415946-45415965 | None:intergenic | 15.0% |
| !!! | TTTTATAGATAAATGTTAGT+TGG | + | chr4_3:45416118-45416137 | Msa0643020:intron | 15.0% |
| !! | ATGCTATTAAAATTAAGTAA+GGG | - | chr4_3:45417207-45417226 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr4_3:45417206-45417225 | None:intergenic | 15.0% |
| !! | AAGCATAAATTAAACAAATT+TGG | - | chr4_3:45416865-45416884 | None:intergenic | 15.0% |
| !!! | AATTTTTGCGATATTTTTTT+CGG | - | chr4_3:45416949-45416968 | None:intergenic | 15.0% |
| !! | AGATATAAGTAACAAAAATA+TGG | - | chr4_3:45416984-45417003 | None:intergenic | 15.0% |
| !!! | TAAACAAAATTTATTTTAGC+AGG | + | chr4_3:45417143-45417162 | Msa0643020:intron | 15.0% |
| !!! | AAACAAAATTTATTTTAGCA+GGG | + | chr4_3:45417144-45417163 | Msa0643020:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr4_3:45417206-45417225 | Msa0643020:intron | 15.0% |
| !!! | TTAAAGTCTTCTAAAATAAA+CGG | - | chr4_3:45417324-45417343 | None:intergenic | 15.0% |
| !!! | TATTTTAGAAGACTTTAATT+AGG | + | chr4_3:45417326-45417345 | Msa0643020:intron | 15.0% |
| !! | TAAAGTTTGTCTATAATATA+AGG | - | chr4_3:45417365-45417384 | None:intergenic | 15.0% |
| !!! | TTAACTTTGTTTTCAAAAGT+GGG | - | chr4_3:45415511-45415530 | None:intergenic | 20.0% |
| !!! | TTTAACTTTGTTTTCAAAAG+TGG | - | chr4_3:45415512-45415531 | None:intergenic | 20.0% |
| !! | GTTTATAATTATATGCTTAC+AGG | - | chr4_3:45416482-45416501 | None:intergenic | 20.0% |
| !! | AGTACTTATTATGAAGAAAA+AGG | - | chr4_3:45416524-45416543 | None:intergenic | 20.0% |
| !!! | GTTTTTCAACAATTTTTTAC+AGG | + | chr4_3:45416895-45416914 | Msa0643020:intron | 20.0% |
| !!! | TTAAGGGTTAATTATGTTTT+TGG | - | chr4_3:45417264-45417283 | None:intergenic | 20.0% |
| !! | AATGAAAAAAAGACACAAAA+GGG | - | chr4_3:45417871-45417890 | None:intergenic | 20.0% |
| !! | AAATGAAAAAAAGACACAAA+AGG | - | chr4_3:45417872-45417891 | None:intergenic | 20.0% |
| !! | AAGAGAAATTTGAAAATGAA+AGG | - | chr4_3:45417953-45417972 | None:intergenic | 20.0% |
| !! | TTAAAAAAAAACTCAAGTCA+AGG | - | chr4_3:45418070-45418089 | None:intergenic | 20.0% |
| ! | TAAAAGAGAACTAAGCAATA+TGG | + | chr4_3:45415528-45415547 | Msa0643020:exon | 25.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | - | chr4_3:45416854-45416873 | None:intergenic | 25.0% |
| ! | GTGTTAAGAACGTTATTAAA+AGG | + | chr4_3:45416919-45416938 | Msa0643020:intron | 25.0% |
| ! | AGAAGACTTTAATTAGGTTT+AGG | + | chr4_3:45417332-45417351 | Msa0643020:intron | 25.0% |
| !! | ACTCTTCAACATTATTCTTT+TGG | - | chr4_3:45417704-45417723 | None:intergenic | 25.0% |
| ! | AGGAAAAAAAACCAATAACA+AGG | + | chr4_3:45417793-45417812 | Msa0643020:three_prime_UTR | 25.0% |
| ! | GGAAAAAAAACCAATAACAA+GGG | + | chr4_3:45417794-45417813 | Msa0643020:three_prime_UTR | 25.0% |
| ! | TAGGAATTGAATACATACAT+TGG | - | chr4_3:45417901-45417920 | None:intergenic | 25.0% |
| ! | AGAAATTAAAGTGAACACAT+AGG | - | chr4_3:45417920-45417939 | None:intergenic | 25.0% |
| ! | ATCTGTCAAAGTATGCTTTT+TGG | - | chr4_3:45416319-45416338 | None:intergenic | 30.0% |
| AAAGCATACTTTGACAGATA+TGG | + | chr4_3:45416320-45416339 | Msa0643020:CDS | 30.0% | |
| TTATATGCTTACAGGAACAT+GGG | - | chr4_3:45416474-45416493 | None:intergenic | 30.0% | |
| ATTATATGCTTACAGGAACA+TGG | - | chr4_3:45416475-45416494 | None:intergenic | 30.0% | |
| AGCATAACTAACTATGTGTT+TGG | + | chr4_3:45416547-45416566 | Msa0643020:intron | 30.0% | |
| ! | TGTTTGGTGAAATGATGAAA+AGG | + | chr4_3:45416563-45416582 | Msa0643020:intron | 30.0% |
| ! | GTGAAATGATGAAAAGGTTT+TGG | + | chr4_3:45416569-45416588 | Msa0643020:intron | 30.0% |
| ATGAAAACAGCAAATCCAAT+GGG | - | chr4_3:45416603-45416622 | None:intergenic | 30.0% | |
| !!! | GAGTGCAGAAATTTTTTGTA+GGG | - | chr4_3:45416822-45416841 | None:intergenic | 30.0% |
| !!! | TGAGTGCAGAAATTTTTTGT+AGG | - | chr4_3:45416823-45416842 | None:intergenic | 30.0% |
| !!! | TTTTGCGATATTTTTTTCGG+AGG | - | chr4_3:45416946-45416965 | None:intergenic | 30.0% |
| ! | CAAGTTTAGAACACTATGAA+CGG | - | chr4_3:45417081-45417100 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | + | chr4_3:45417221-45417240 | Msa0643020:intron | 30.0% | |
| ! | TTACAAGGTTGCAATTTTGT+AGG | + | chr4_3:45417236-45417255 | Msa0643020:intron | 30.0% |
| ! | TACAAGGTTGCAATTTTGTA+GGG | + | chr4_3:45417237-45417256 | Msa0643020:intron | 30.0% |
| !!! | ATTGTTTTTGTGATGAACAG+TGG | + | chr4_3:45417510-45417529 | Msa0643020:intron | 30.0% |
| AATTAACATCATAGCTTGGT+TGG | - | chr4_3:45417678-45417697 | None:intergenic | 30.0% | |
| GAGAAATTAACATCATAGCT+TGG | - | chr4_3:45417682-45417701 | None:intergenic | 30.0% | |
| CATGGTTATCTACAATTTCA+TGG | - | chr4_3:45417821-45417840 | None:intergenic | 30.0% | |
| ACAAGGATGGAAGATAAATA+TGG | - | chr4_3:45417988-45418007 | None:intergenic | 30.0% | |
| TTGATACGAAATTCACAACA+AGG | - | chr4_3:45418005-45418024 | None:intergenic | 30.0% | |
| AGTATGGTTTGAGTAGAATG+AGG | - | chr4_3:45415469-45415488 | None:intergenic | 35.0% | |
| !! | GTAGTGGATTGAATTGAGTA+TGG | - | chr4_3:45415485-45415504 | None:intergenic | 35.0% |
| CAATATGGCTAAAGATGTTG+AGG | + | chr4_3:45415543-45415562 | Msa0643020:exon | 35.0% | |
| AACTCCTCAACATCTATCAA+TGG | - | chr4_3:45415622-45415641 | None:intergenic | 35.0% | |
| ATGTTGAGGAGTTAACAAAG+TGG | + | chr4_3:45415629-45415648 | Msa0643020:CDS | 35.0% | |
| TGGTCAAAACAGTGACATAA+AGG | - | chr4_3:45415702-45415721 | None:intergenic | 35.0% | |
| !!! | GTCACTGTTTTGACCATTAT+TGG | + | chr4_3:45415706-45415725 | Msa0643020:CDS | 35.0% |
| !! | TGTGATGGTGTTGGAATTTT+GGG | + | chr4_3:45415769-45415788 | Msa0643020:CDS | 35.0% |
| !! | TTGGAATTTTGGGTATTGCT+TGG | + | chr4_3:45415779-45415798 | Msa0643020:CDS | 35.0% |
| !! | TGGAATTTTGGGTATTGCTT+GGG | + | chr4_3:45415780-45415799 | Msa0643020:CDS | 35.0% |
| TTATAGCATACCAGAGATAC+CGG | - | chr4_3:45415845-45415864 | None:intergenic | 35.0% | |
| TACACATGCAAGGACTTTAT+AGG | + | chr4_3:45415881-45415900 | Msa0643020:intron | 35.0% | |
| ATGTGTGAAATTGTGATCAC+AGG | + | chr4_3:45416164-45416183 | Msa0643020:intron | 35.0% | |
| !! | GTATGCTTTTTGGAAACCTT+TGG | - | chr4_3:45416309-45416328 | None:intergenic | 35.0% |
| GTAGCCATCATGAATAAAGT+TGG | - | chr4_3:45416354-45416373 | None:intergenic | 35.0% | |
| ATTCATGATGGCTACAACAA+AGG | + | chr4_3:45416359-45416378 | Msa0643020:CDS | 35.0% | |
| CATGAAAACAGCAAATCCAA+TGG | - | chr4_3:45416604-45416623 | None:intergenic | 35.0% | |
| !!! | CATTGGATTTGCTGTTTTCA+TGG | + | chr4_3:45416602-45416621 | Msa0643020:CDS | 35.0% |
| TCTACAATGACGGCAAAATT+TGG | + | chr4_3:45416694-45416713 | Msa0643020:CDS | 35.0% | |
| CTACAATGACGGCAAAATTT+GGG | + | chr4_3:45416695-45416714 | Msa0643020:CDS | 35.0% | |
| !!! | TGTTTTTGGTCCCTACAAAA+TGG | + | chr4_3:45416749-45416768 | Msa0643020:intron | 35.0% |
| AAGTAAGGGCTAAACTTACA+AGG | - | chr4_3:45416778-45416797 | None:intergenic | 35.0% | |
| TGATGAACAGTGGATATTCT+GGG | + | chr4_3:45417520-45417539 | Msa0643020:intron | 35.0% | |
| TACCACCAATACATTCTAAG+AGG | + | chr4_3:45417578-45417597 | Msa0643020:CDS | 35.0% | |
| AACCTCTTAGAATGTATTGG+TGG | - | chr4_3:45417583-45417602 | None:intergenic | 35.0% | |
| CTGAACCTCTTAGAATGTAT+TGG | - | chr4_3:45417586-45417605 | None:intergenic | 35.0% | |
| ! | TAATTAAGCATTGCTCCTGA+AGG | - | chr4_3:45417627-45417646 | None:intergenic | 35.0% |
| ! | GTTGAAGAGTGCAAATTAAG+TGG | + | chr4_3:45417714-45417733 | Msa0643020:three_prime_UTR | 35.0% |
| CTGAAAAGGAAAAGACGAAA+AGG | - | chr4_3:45417751-45417770 | None:intergenic | 35.0% | |
| ! | ATTTCATGGTCCCTTGTTAT+TGG | - | chr4_3:45417807-45417826 | None:intergenic | 35.0% |
| ATAACCATGCTTGTGTTTCA+AGG | + | chr4_3:45417832-45417851 | Msa0643020:three_prime_UTR | 35.0% | |
| TAACCATGCTTGTGTTTCAA+GGG | + | chr4_3:45417833-45417852 | Msa0643020:three_prime_UTR | 35.0% | |
| TACGAAATTCACAACAAGGA+TGG | - | chr4_3:45418001-45418020 | None:intergenic | 35.0% | |
| ATGGTTTGAGTAGAATGAGG+TGG | - | chr4_3:45415466-45415485 | None:intergenic | 40.0% | |
| TTTCAAAAGTGGGAGAGTAG+TGG | - | chr4_3:45415501-45415520 | None:intergenic | 40.0% | |
| GATGTTGAGGTTCAAGAACA+AGG | + | chr4_3:45415556-45415575 | Msa0643020:CDS | 40.0% | |
| TCAACATCTATCAATGGTGC+TGG | - | chr4_3:45415616-45415635 | None:intergenic | 40.0% | |
| AGCACCATTGATAGATGTTG+AGG | + | chr4_3:45415615-45415634 | Msa0643020:CDS | 40.0% | |
| CTGGTGGCTATAACCAATAA+TGG | - | chr4_3:45415722-45415741 | None:intergenic | 40.0% | |
| !! | CTGTGATGGTGTTGGAATTT+TGG | + | chr4_3:45415768-45415787 | Msa0643020:CDS | 40.0% |
| TGTGAAATTGTGATCACAGG+AGG | + | chr4_3:45416167-45416186 | Msa0643020:intron | 40.0% | |
| GTAAAACACTGCCCTAATCA+AGG | - | chr4_3:45416243-45416262 | None:intergenic | 40.0% | |
| ! | GATTAGGGCAGTGTTTTACA+TGG | + | chr4_3:45416244-45416263 | Msa0643020:CDS | 40.0% |
| GCATACTTTGACAGATATGG+AGG | + | chr4_3:45416323-45416342 | Msa0643020:CDS | 40.0% | |
| TACTTTGACAGATATGGAGG+TGG | + | chr4_3:45416326-45416345 | Msa0643020:CDS | 40.0% | |
| GGTGCCAACTTTATTCATGA+TGG | + | chr4_3:45416347-45416366 | Msa0643020:CDS | 40.0% | |
| ! | TACAACAAAGGCACAGCTTT+GGG | + | chr4_3:45416371-45416390 | Msa0643020:CDS | 40.0% |
| GACAGTGTAGACAAGAACAA+AGG | - | chr4_3:45416414-45416433 | None:intergenic | 40.0% | |
| !!! | TGCTGTTTTCATGGTTCACT+TGG | + | chr4_3:45416611-45416630 | Msa0643020:CDS | 40.0% |
| ATTAACCCGGCAAGAAGTTT+CGG | + | chr4_3:45416660-45416679 | Msa0643020:CDS | 40.0% | |
| TTTGCCGTCATTGTAGATCA+CGG | - | chr4_3:45416691-45416710 | None:intergenic | 40.0% | |
| !! | TACAAGGTCGCCATTTTGTA+GGG | - | chr4_3:45416762-45416781 | None:intergenic | 40.0% |
| !! | TTACAAGGTCGCCATTTTGT+AGG | - | chr4_3:45416763-45416782 | None:intergenic | 40.0% |
| GTGATGAACAGTGGATATTC+TGG | + | chr4_3:45417519-45417538 | Msa0643020:intron | 40.0% | |
| ! | GAAGGATCCAAGAGCTTTAA+TGG | - | chr4_3:45417609-45417628 | None:intergenic | 40.0% |
| TTAAAGCTCTTGGATCCTTC+AGG | + | chr4_3:45417609-45417628 | Msa0643020:CDS | 40.0% | |
| CAAATTAAGTGGTCCTATCC+TGG | + | chr4_3:45417725-45417744 | Msa0643020:three_prime_UTR | 40.0% | |
| ! | ACATCTATCAATGGTGCTGG+AGG | - | chr4_3:45415613-45415632 | None:intergenic | 45.0% |
| !! | TTGGGTATTGCTTGGGCTTT+TGG | + | chr4_3:45415787-45415806 | Msa0643020:CDS | 45.0% |
| ! | ATCCTTGTTTACTGTACCGC+CGG | + | chr4_3:45415823-45415842 | Msa0643020:CDS | 45.0% |
| TGCATGTGTAAGAGAGTGAG+AGG | - | chr4_3:45415871-45415890 | None:intergenic | 45.0% | |
| CTCACTCTCTTACACATGCA+AGG | + | chr4_3:45415871-45415890 | Msa0643020:intron | 45.0% | |
| ATGGCATGCAACCCTAGTTA+GGG | - | chr4_3:45415927-45415946 | None:intergenic | 45.0% | |
| TATGGCATGCAACCCTAGTT+AGG | - | chr4_3:45415928-45415947 | None:intergenic | 45.0% | |
| !! | ACGGAAGGTGTCCTTGATTA+GGG | + | chr4_3:45416229-45416248 | Msa0643020:CDS | 45.0% |
| TTGGAAACCTTTGGCAAGTC+CGG | - | chr4_3:45416300-45416319 | None:intergenic | 45.0% | |
| ! | CTACAACAAAGGCACAGCTT+TGG | + | chr4_3:45416370-45416389 | Msa0643020:CDS | 45.0% |
| !! | GCTTTGGGTGCTGAAATCAT+TGG | + | chr4_3:45416386-45416405 | Msa0643020:CDS | 45.0% |
| TGACCCTAAGAGAAACGCTA+GGG | + | chr4_3:45416445-45416464 | Msa0643020:CDS | 45.0% | |
| AGTCCCTAGCGTTTCTCTTA+GGG | - | chr4_3:45416451-45416470 | None:intergenic | 45.0% | |
| ACAGCAAATCCAATGGGAAG+TGG | - | chr4_3:45416597-45416616 | None:intergenic | 45.0% | |
| TTGGCTACTATCCCCATTAC+CGG | + | chr4_3:45416630-45416649 | Msa0643020:CDS | 45.0% | |
| !! | TTAATACCGGTGCCGGTAAT+GGG | - | chr4_3:45416645-45416664 | None:intergenic | 45.0% |
| ACTTCTTGCCGGGTTAATAC+CGG | - | chr4_3:45416658-45416677 | None:intergenic | 45.0% | |
| TCAGCCGTGATCTACAATGA+CGG | + | chr4_3:45416684-45416703 | Msa0643020:CDS | 45.0% | |
| ! | CGGCAAAATTTGGGATGATC+AGG | + | chr4_3:45416704-45416723 | Msa0643020:CDS | 45.0% |
| GAACAGTGGATATTCTGGGT+TGG | + | chr4_3:45417524-45417543 | Msa0643020:intron | 45.0% | |
| !! | TTCTGGGTTGGTCCAATGAT+TGG | + | chr4_3:45417536-45417555 | Msa0643020:CDS | 45.0% |
| GGTTCAGCCATTAAAGCTCT+TGG | + | chr4_3:45417599-45417618 | Msa0643020:CDS | 45.0% | |
| AAAGACGAAAAGGCCAGGAT+AGG | - | chr4_3:45417741-45417760 | None:intergenic | 45.0% | |
| AAGGAAAAGACGAAAAGGCC+AGG | - | chr4_3:45417746-45417765 | None:intergenic | 45.0% | |
| ! | TTTTCAGCTGCAACTGCAGT+GGG | + | chr4_3:45417764-45417783 | Msa0643020:three_prime_UTR | 45.0% |
| ACACCCTTGAAACACAAGCA+TGG | - | chr4_3:45417839-45417858 | None:intergenic | 45.0% | |
| ! | CTATCAATGGTGCTGGAGGT+GGG | - | chr4_3:45415609-45415628 | None:intergenic | 50.0% |
| ! | TCTATCAATGGTGCTGGAGG+TGG | - | chr4_3:45415610-45415629 | None:intergenic | 50.0% |
| !! | CAGCTTTAGGATCAGACTGG+TGG | - | chr4_3:45415738-45415757 | None:intergenic | 50.0% |
| CACCAGTCTGATCCTAAAGC+TGG | + | chr4_3:45415736-45415755 | Msa0643020:CDS | 50.0% | |
| !! | CACCAGCTTTAGGATCAGAC+TGG | - | chr4_3:45415741-45415760 | None:intergenic | 50.0% |
| CAGTCTGATCCTAAAGCTGG+TGG | + | chr4_3:45415739-45415758 | Msa0643020:CDS | 50.0% | |
| CAGTCAGTACCACCAGCTTT+AGG | - | chr4_3:45415751-45415770 | None:intergenic | 50.0% | |
| !! | GGTACTGACTGTGATGGTGT+TGG | + | chr4_3:45415760-45415779 | Msa0643020:CDS | 50.0% |
| ! | GGTATTGCTTGGGCTTTTGG+TGG | + | chr4_3:45415790-45415809 | Msa0643020:CDS | 50.0% |
| TACCGGCGGTACAGTAAACA+AGG | - | chr4_3:45415828-45415847 | None:intergenic | 50.0% | |
| TAGCATACCAGAGATACCGG+CGG | - | chr4_3:45415842-45415861 | None:intergenic | 50.0% | |
| ATCAACCCTGCCGTGACATT+CGG | + | chr4_3:45416194-45416213 | Msa0643020:CDS | 50.0% | |
| CACGAATAGCCCGAATGTCA+CGG | - | chr4_3:45416207-45416226 | None:intergenic | 50.0% | |
| GTGACATTCGGGCTATTCGT+GGG | + | chr4_3:45416206-45416225 | Msa0643020:CDS | 50.0% | |
| !! | GACGGAAGGTGTCCTTGATT+AGG | + | chr4_3:45416228-45416247 | Msa0643020:CDS | 50.0% |
| CTGACCCTAAGAGAAACGCT+AGG | + | chr4_3:45416444-45416463 | Msa0643020:CDS | 50.0% | |
| GAGTCCCTAGCGTTTCTCTT+AGG | - | chr4_3:45416452-45416471 | None:intergenic | 50.0% | |
| !! | GTTTTGGCACCACTTCCCAT+TGG | + | chr4_3:45416585-45416604 | Msa0643020:CDS | 50.0% |
| !! | TAATACCGGTGCCGGTAATG+GGG | - | chr4_3:45416644-45416663 | None:intergenic | 50.0% |
| !! | GTTAATACCGGTGCCGGTAA+TGG | - | chr4_3:45416646-45416665 | None:intergenic | 50.0% |
| CTGATCCGAAACTTCTTGCC+GGG | - | chr4_3:45416668-45416687 | None:intergenic | 50.0% | |
| GCTGATCCGAAACTTCTTGC+CGG | - | chr4_3:45416669-45416688 | None:intergenic | 50.0% | |
| TCCAATGATTGGAGCTGCTG+TGG | + | chr4_3:45417547-45417566 | Msa0643020:CDS | 50.0% | |
| CACTGCAGTTGCAGCTGAAA+AGG | - | chr4_3:45417765-45417784 | None:intergenic | 50.0% | |
| ! | CTTTTCAGCTGCAACTGCAG+TGG | + | chr4_3:45417763-45417782 | Msa0643020:three_prime_UTR | 50.0% |
| TTTCAGCTGCAACTGCAGTG+GGG | + | chr4_3:45417765-45417784 | Msa0643020:three_prime_UTR | 50.0% | |
| !! | GCTGGTGGTACTGACTGTGA+TGG | + | chr4_3:45415754-45415773 | Msa0643020:CDS | 55.0% |
| TACTGTACCGCCGGTATCTC+TGG | + | chr4_3:45415832-45415851 | Msa0643020:CDS | 55.0% | |
| ACGACGCAGCAACCCTAACT+AGG | + | chr4_3:45415912-45415931 | Msa0643020:intron | 55.0% | |
| CGACGCAGCAACCCTAACTA+GGG | + | chr4_3:45415913-45415932 | Msa0643020:intron | 55.0% | |
| TCAACCCTGCCGTGACATTC+GGG | + | chr4_3:45416195-45416214 | Msa0643020:CDS | 55.0% | |
| ATAGCCCGAATGTCACGGCA+GGG | - | chr4_3:45416202-45416221 | None:intergenic | 55.0% | |
| AATAGCCCGAATGTCACGGC+AGG | - | chr4_3:45416203-45416222 | None:intergenic | 55.0% | |
| CGTGACATTCGGGCTATTCG+TGG | + | chr4_3:45416205-45416224 | Msa0643020:CDS | 55.0% | |
| CATTCGGGCTATTCGTGGGA+CGG | + | chr4_3:45416210-45416229 | Msa0643020:CDS | 55.0% | |
| TACATGGCAGCACAGTGTGC+CGG | + | chr4_3:45416260-45416279 | Msa0643020:CDS | 55.0% | |
| ! | TGTGGTACCGGACTTGCCAA+AGG | + | chr4_3:45416290-45416309 | Msa0643020:CDS | 55.0% |
| ACTATCCCCATTACCGGCAC+CGG | + | chr4_3:45416636-45416655 | Msa0643020:CDS | 55.0% | |
| !! | TACCGGCACCGGTATTAACC+CGG | + | chr4_3:45416647-45416666 | Msa0643020:CDS | 55.0% |
| GCCACAGCAGCTCCAATCAT+TGG | - | chr4_3:45417551-45417570 | None:intergenic | 55.0% | |
| ATGATTGGAGCTGCTGTGGC+TGG | + | chr4_3:45417551-45417570 | Msa0643020:CDS | 55.0% | |
| TCCGGTACCACAGATTGCGC+CGG | - | chr4_3:45416282-45416301 | None:intergenic | 60.0% | |
| TGCCGGGTTAATACCGGTGC+CGG | - | chr4_3:45416652-45416671 | None:intergenic | 60.0% | |
| GCTGCAACTGCAGTGGGGTT+TGG | + | chr4_3:45417770-45417789 | Msa0643020:three_prime_UTR | 60.0% | |
| GCAACTGCAGTGGGGTTTGG+AGG | + | chr4_3:45417773-45417792 | Msa0643020:three_prime_UTR | 60.0% | |
| CGGGCTATTCGTGGGACGGA+AGG | + | chr4_3:45416214-45416233 | Msa0643020:CDS | 65.0% | |
| ! | CAGTGTGCCGGCGCAATCTG+TGG | + | chr4_3:45416272-45416291 | Msa0643020:CDS | 65.0% |
| GCCGGCGCAATCTGTGGTAC+CGG | + | chr4_3:45416278-45416297 | Msa0643020:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 45415433 | 45418111 | 45415433 | ID=Msa0643020;Name=Msa0643020 |
| chr4_3 | mRNA | 45415433 | 45418111 | 45415433 | ID=Msa0643020-mRNA-1;Parent=Msa0643020;Name=Msa0643020-mRNA-1;_AED=0.03;_eAED=0.03;_QI=114|1|1|1|1|1|4|468|285 |
| chr4_3 | exon | 45415433 | 45415853 | 45415433 | ID=Msa0643020-mRNA-1:exon:10502;Parent=Msa0643020-mRNA-1 |
| chr4_3 | exon | 45416186 | 45416481 | 45416186 | ID=Msa0643020-mRNA-1:exon:10503;Parent=Msa0643020-mRNA-1 |
| chr4_3 | exon | 45416585 | 45416725 | 45416585 | ID=Msa0643020-mRNA-1:exon:10504;Parent=Msa0643020-mRNA-1 |
| chr4_3 | exon | 45417530 | 45418111 | 45417530 | ID=Msa0643020-mRNA-1:exon:10505;Parent=Msa0643020-mRNA-1 |
| chr4_3 | five_prime_UTR | 45415433 | 45415546 | 45415433 | ID=Msa0643020-mRNA-1:five_prime_utr;Parent=Msa0643020-mRNA-1 |
| chr4_3 | CDS | 45415547 | 45415853 | 45415547 | ID=Msa0643020-mRNA-1:cds;Parent=Msa0643020-mRNA-1 |
| chr4_3 | CDS | 45416186 | 45416481 | 45416186 | ID=Msa0643020-mRNA-1:cds;Parent=Msa0643020-mRNA-1 |
| chr4_3 | CDS | 45416585 | 45416725 | 45416585 | ID=Msa0643020-mRNA-1:cds;Parent=Msa0643020-mRNA-1 |
| chr4_3 | CDS | 45417530 | 45417643 | 45417530 | ID=Msa0643020-mRNA-1:cds;Parent=Msa0643020-mRNA-1 |
| chr4_3 | three_prime_UTR | 45417644 | 45418111 | 45417644 | ID=Msa0643020-mRNA-1:three_prime_utr;Parent=Msa0643020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
