Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1159270 | XP_003624741.1 | 96.369 | 358 | 11 | 1 | 1 | 358 | 1 | 356 | 0.0 | 702 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1159270 | sp|Q5NBM8|CSA_ORYSJ | 82.906 | 117 | 20 | 0 | 87 | 203 | 45 | 161 | 1.27e-72 | 232 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1159270 | A2Q4D1 | 96.369 | 358 | 11 | 1 | 1 | 358 | 1 | 356 | 0.0 | 702 |
Gene ID | Type | Classification |
---|---|---|
Msa1159270 | TF | MYB |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0795750 | Msa1159270 | 0.818236 | 2.177724e-52 | -8.615850e-47 |
Msa1032470 | Msa1159270 | 0.859928 | 2.944464e-63 | -8.615850e-47 |
Msa1072250 | Msa1159270 | 0.822368 | 2.459190e-53 | -8.615850e-47 |
Msa0241750 | Msa1159270 | 0.807617 | 4.631691e-50 | -8.615850e-47 |
Msa1159270 | Msa1197720 | 0.808107 | 3.642642e-50 | -8.615850e-47 |
Msa1159270 | Msa1251410 | 0.814405 | 1.566720e-51 | -8.615850e-47 |
Msa1159270 | Msa1351990 | 0.851609 | 7.939851e-61 | -8.615850e-47 |
Msa1159270 | Msa1396200 | -0.800774 | 1.231063e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1159270 | MtrunA17_Chr7g0254261 | 96.369 | 358 | 11 | 1 | 1 | 358 | 1 | 356 | 0.0 | 702 |
Msa1159270 | MtrunA17_Chr6g0460671 | 50.467 | 321 | 132 | 7 | 34 | 354 | 52 | 345 | 5.09e-81 | 251 |
Msa1159270 | MtrunA17_Chr4g0042501 | 75.714 | 140 | 34 | 0 | 64 | 203 | 78 | 217 | 2.31e-75 | 239 |
Msa1159270 | MtrunA17_Chr5g0417621 | 42.368 | 321 | 131 | 10 | 84 | 356 | 127 | 441 | 1.04e-71 | 229 |
Msa1159270 | MtrunA17_Chr3g0125801 | 43.463 | 283 | 149 | 4 | 86 | 358 | 11 | 292 | 3.29e-63 | 203 |
Msa1159270 | MtrunA17_Chr6g0480581 | 74.107 | 112 | 29 | 0 | 88 | 199 | 1 | 112 | 2.98e-61 | 196 |
Msa1159270 | MtrunA17_Chr6g0460661 | 56.098 | 123 | 54 | 0 | 90 | 212 | 15 | 137 | 3.25e-46 | 155 |
Msa1159270 | MtrunA17_Chr4g0008551 | 59.406 | 101 | 41 | 0 | 91 | 191 | 38 | 138 | 5.62e-40 | 144 |
Msa1159270 | MtrunA17_Chr5g0401731 | 44.138 | 145 | 72 | 2 | 91 | 235 | 15 | 150 | 1.55e-37 | 137 |
Msa1159270 | MtrunA17_Chr4g0053431 | 55.446 | 101 | 45 | 0 | 91 | 191 | 5 | 105 | 7.37e-37 | 134 |
Msa1159270 | MtrunA17_Chr3g0133601 | 55.446 | 101 | 45 | 0 | 91 | 191 | 37 | 137 | 9.24e-36 | 130 |
Msa1159270 | MtrunA17_Chr6g0454921 | 50.495 | 101 | 50 | 0 | 91 | 191 | 15 | 115 | 2.82e-34 | 125 |
Msa1159270 | MtrunA17_Chr1g0157731 | 45.185 | 135 | 69 | 2 | 61 | 191 | 58 | 191 | 5.60e-33 | 130 |
Msa1159270 | MtrunA17_Chr3g0139671 | 43.704 | 135 | 71 | 2 | 61 | 191 | 52 | 185 | 1.01e-32 | 129 |
Msa1159270 | MtrunA17_Chr7g0238631 | 54.455 | 101 | 46 | 0 | 91 | 191 | 113 | 213 | 1.53e-32 | 127 |
Msa1159270 | MtrunA17_Chr5g0437321 | 52.632 | 95 | 45 | 0 | 91 | 185 | 19 | 113 | 1.67e-31 | 120 |
Msa1159270 | MtrunA17_Chr5g0429661 | 40.625 | 160 | 90 | 2 | 86 | 245 | 117 | 271 | 8.25e-30 | 117 |
Msa1159270 | MtrunA17_Chr3g0117511 | 39.873 | 158 | 92 | 2 | 91 | 248 | 183 | 337 | 1.67e-28 | 115 |
Msa1159270 | MtrunA17_Chr7g0228401 | 31.154 | 260 | 147 | 6 | 50 | 283 | 236 | 489 | 5.68e-28 | 114 |
Msa1159270 | MtrunA17_Chr5g0397841 | 53.261 | 92 | 43 | 0 | 94 | 185 | 113 | 204 | 9.53e-27 | 110 |
Msa1159270 | MtrunA17_Chr3g0103281 | 46.078 | 102 | 54 | 1 | 91 | 191 | 14 | 115 | 1.04e-26 | 108 |
Msa1159270 | MtrunA17_Chr4g0058991 | 31.746 | 189 | 118 | 2 | 28 | 216 | 157 | 334 | 1.11e-26 | 110 |
Msa1159270 | MtrunA17_Chr7g0228531 | 31.628 | 215 | 135 | 3 | 91 | 299 | 220 | 428 | 4.69e-26 | 108 |
Msa1159270 | MtrunA17_Chr4g0022901 | 48.039 | 102 | 52 | 1 | 91 | 191 | 15 | 116 | 5.67e-26 | 105 |
Msa1159270 | MtrunA17_Chr3g0099131 | 44.545 | 110 | 60 | 1 | 91 | 199 | 43 | 152 | 1.29e-25 | 107 |
Msa1159270 | MtrunA17_Chr4g0022911 | 48.039 | 102 | 52 | 1 | 91 | 191 | 15 | 116 | 2.01e-25 | 103 |
Msa1159270 | MtrunA17_Chr4g0022931 | 40.278 | 144 | 83 | 3 | 91 | 231 | 15 | 158 | 2.23e-25 | 103 |
Msa1159270 | MtrunA17_Chr2g0323351 | 47.059 | 102 | 51 | 2 | 91 | 190 | 14 | 114 | 4.94e-25 | 102 |
Msa1159270 | MtrunA17_Chr5g0417821 | 45.098 | 102 | 55 | 1 | 91 | 191 | 9 | 110 | 1.09e-24 | 102 |
Msa1159270 | MtrunA17_Chr4g0055981 | 34.194 | 155 | 95 | 3 | 90 | 241 | 56 | 206 | 1.36e-24 | 100 |
Msa1159270 | MtrunA17_Chr1g0203411 | 42.857 | 105 | 59 | 1 | 91 | 194 | 14 | 118 | 1.81e-24 | 101 |
Msa1159270 | MtrunA17_Chr8g0360111 | 48.000 | 100 | 51 | 1 | 91 | 189 | 27 | 126 | 2.22e-24 | 100 |
Msa1159270 | MtrunA17_Chr1g0203441 | 45.631 | 103 | 53 | 2 | 91 | 191 | 15 | 116 | 2.58e-24 | 100 |
Msa1159270 | MtrunA17_Chr3g0115821 | 43.966 | 116 | 57 | 3 | 83 | 191 | 1 | 115 | 3.04e-24 | 101 |
Msa1159270 | MtrunA17_Chr2g0311221 | 48.454 | 97 | 49 | 1 | 91 | 186 | 16 | 112 | 3.05e-24 | 101 |
Msa1159270 | MtrunA17_Chr5g0434911 | 44.118 | 102 | 56 | 1 | 91 | 191 | 23 | 124 | 3.96e-24 | 100 |
Msa1159270 | MtrunA17_Chr8g0354661 | 40.602 | 133 | 76 | 2 | 68 | 199 | 18 | 148 | 4.45e-24 | 103 |
Msa1159270 | MtrunA17_Chr4g0048511 | 47.059 | 102 | 53 | 1 | 91 | 191 | 15 | 116 | 7.41e-24 | 100 |
Msa1159270 | MtrunA17_Chr7g0220341 | 40.496 | 121 | 69 | 1 | 74 | 191 | 10 | 130 | 1.06e-23 | 99.0 |
Msa1159270 | MtrunA17_Chr5g0434841 | 27.500 | 280 | 165 | 6 | 91 | 350 | 22 | 283 | 1.20e-23 | 99.8 |
Msa1159270 | MtrunA17_Chr3g0080861 | 42.727 | 110 | 62 | 1 | 91 | 199 | 39 | 148 | 1.50e-23 | 101 |
Msa1159270 | MtrunA17_Chr1g0193801 | 41.071 | 112 | 65 | 1 | 85 | 195 | 8 | 119 | 1.90e-23 | 100 |
Msa1159270 | MtrunA17_Chr2g0322521 | 45.238 | 126 | 62 | 3 | 76 | 199 | 20 | 140 | 2.05e-23 | 100 |
Msa1159270 | MtrunA17_Chr7g0274581 | 45.098 | 102 | 55 | 1 | 91 | 191 | 14 | 115 | 2.32e-23 | 96.3 |
Msa1159270 | MtrunA17_Chr6g0470971 | 41.748 | 103 | 57 | 2 | 91 | 191 | 16 | 117 | 2.56e-23 | 98.2 |
Msa1159270 | MtrunA17_Chr7g0270891 | 40.179 | 112 | 66 | 1 | 85 | 195 | 8 | 119 | 2.84e-23 | 99.4 |
Msa1159270 | MtrunA17_Chr5g0434831 | 43.137 | 102 | 57 | 1 | 91 | 191 | 9 | 110 | 3.07e-23 | 95.5 |
Msa1159270 | MtrunA17_Chr7g0228991 | 43.137 | 102 | 57 | 1 | 91 | 191 | 31 | 132 | 3.59e-23 | 97.4 |
Msa1159270 | MtrunA17_Chr7g0228481 | 29.864 | 221 | 131 | 4 | 91 | 299 | 220 | 428 | 4.33e-23 | 99.8 |
Msa1159270 | MtrunA17_Chr2g0281071 | 45.098 | 102 | 55 | 1 | 91 | 191 | 15 | 116 | 6.05e-23 | 98.2 |
Msa1159270 | MtrunA17_Chr1g0192411 | 36.765 | 136 | 85 | 1 | 91 | 225 | 14 | 149 | 6.62e-23 | 99.0 |
Msa1159270 | MtrunA17_Chr1g0167691 | 43.137 | 102 | 57 | 1 | 91 | 191 | 14 | 115 | 7.17e-23 | 96.3 |
Msa1159270 | MtrunA17_Chr2g0309911 | 43.137 | 102 | 57 | 1 | 91 | 191 | 13 | 114 | 7.77e-23 | 97.4 |
Msa1159270 | MtrunA17_Chr2g0323411 | 46.078 | 102 | 54 | 1 | 91 | 191 | 14 | 115 | 7.87e-23 | 97.4 |
Msa1159270 | MtrunA17_Chr5g0434931 | 42.157 | 102 | 58 | 1 | 91 | 191 | 37 | 138 | 8.03e-23 | 96.7 |
Msa1159270 | MtrunA17_Chr1g0193371 | 40.179 | 112 | 64 | 2 | 85 | 194 | 8 | 118 | 1.66e-22 | 97.4 |
Msa1159270 | MtrunA17_Chr6g0452271 | 43.137 | 102 | 57 | 1 | 91 | 191 | 14 | 115 | 1.67e-22 | 96.7 |
Msa1159270 | MtrunA17_Chr1g0154031 | 43.636 | 110 | 61 | 1 | 91 | 199 | 78 | 187 | 2.00e-22 | 97.4 |
Msa1159270 | MtrunA17_Chr4g0022891 | 37.903 | 124 | 69 | 3 | 91 | 212 | 14 | 131 | 2.21e-22 | 94.4 |
Msa1159270 | MtrunA17_Chr4g0058631 | 40.566 | 106 | 62 | 1 | 91 | 195 | 14 | 119 | 2.56e-22 | 96.7 |
Msa1159270 | MtrunA17_Chr5g0397231 | 43.519 | 108 | 55 | 2 | 83 | 184 | 1 | 108 | 3.32e-22 | 95.9 |
Msa1159270 | MtrunA17_Chr8g0342541 | 41.379 | 116 | 60 | 3 | 83 | 191 | 1 | 115 | 3.99e-22 | 95.9 |
Msa1159270 | MtrunA17_Chr4g0037141 | 31.351 | 185 | 115 | 4 | 83 | 259 | 1 | 181 | 5.36e-22 | 94.4 |
Msa1159270 | MtrunA17_Chr5g0400821 | 41.964 | 112 | 58 | 3 | 91 | 195 | 14 | 125 | 6.87e-22 | 94.7 |
Msa1159270 | MtrunA17_Chr2g0330041 | 44.037 | 109 | 53 | 3 | 83 | 184 | 1 | 108 | 7.24e-22 | 95.9 |
Msa1159270 | MtrunA17_Chr5g0435101 | 41.748 | 103 | 59 | 1 | 90 | 191 | 12 | 114 | 9.82e-22 | 92.0 |
Msa1159270 | MtrunA17_Chr3g0117091 | 38.760 | 129 | 74 | 3 | 91 | 215 | 14 | 141 | 1.02e-21 | 94.7 |
Msa1159270 | MtrunA17_Chr5g0395281 | 43.689 | 103 | 55 | 2 | 91 | 191 | 14 | 115 | 1.06e-21 | 94.0 |
Msa1159270 | MtrunA17_Chr5g0410961 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 1.32e-21 | 94.4 |
Msa1159270 | MtrunA17_Chr4g0032401 | 42.157 | 102 | 58 | 1 | 91 | 191 | 19 | 120 | 1.53e-21 | 94.0 |
Msa1159270 | MtrunA17_Chr2g0327821 | 34.615 | 156 | 90 | 4 | 91 | 244 | 8 | 153 | 1.62e-21 | 92.0 |
Msa1159270 | MtrunA17_Chr8g0387421 | 41.509 | 106 | 61 | 1 | 91 | 195 | 14 | 119 | 1.65e-21 | 93.6 |
Msa1159270 | MtrunA17_Chr1g0177901 | 50.602 | 83 | 41 | 0 | 102 | 184 | 5 | 87 | 1.71e-21 | 91.3 |
Msa1159270 | MtrunA17_Chr1g0209661 | 40.000 | 105 | 62 | 1 | 91 | 194 | 29 | 133 | 1.80e-21 | 93.6 |
Msa1159270 | MtrunA17_Chr2g0328771 | 43.689 | 103 | 55 | 2 | 91 | 191 | 22 | 123 | 1.80e-21 | 93.6 |
Msa1159270 | MtrunA17_Chr4g0070611 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 1.85e-21 | 93.2 |
Msa1159270 | MtrunA17_Chr4g0030881 | 40.678 | 118 | 59 | 3 | 87 | 195 | 5 | 120 | 1.89e-21 | 92.4 |
Msa1159270 | MtrunA17_Chr8g0342521 | 40.517 | 116 | 61 | 3 | 83 | 191 | 1 | 115 | 1.95e-21 | 94.0 |
Msa1159270 | MtrunA17_Chr1g0211161 | 41.121 | 107 | 60 | 2 | 91 | 195 | 15 | 120 | 2.00e-21 | 91.7 |
Msa1159270 | MtrunA17_Chr1g0180391 | 37.162 | 148 | 80 | 4 | 91 | 230 | 21 | 163 | 2.23e-21 | 91.7 |
Msa1159270 | MtrunA17_Chr3g0135311 | 38.525 | 122 | 69 | 3 | 91 | 206 | 14 | 135 | 2.41e-21 | 93.6 |
Msa1159270 | MtrunA17_Chr7g0261281 | 42.157 | 102 | 58 | 1 | 91 | 191 | 14 | 115 | 2.48e-21 | 92.4 |
Msa1159270 | MtrunA17_Chr4g0070641 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 2.67e-21 | 89.7 |
Msa1159270 | MtrunA17_Chr8g0342481 | 41.880 | 117 | 59 | 4 | 83 | 191 | 1 | 116 | 4.25e-21 | 93.6 |
Msa1159270 | MtrunA17_Chr7g0217221 | 40.196 | 102 | 60 | 1 | 91 | 191 | 14 | 115 | 4.52e-21 | 91.7 |
Msa1159270 | MtrunA17_Chr7g0271241 | 42.718 | 103 | 56 | 2 | 85 | 185 | 8 | 109 | 5.04e-21 | 93.2 |
Msa1159270 | MtrunA17_Chr4g0028311 | 44.231 | 104 | 54 | 3 | 91 | 191 | 14 | 116 | 5.50e-21 | 92.4 |
Msa1159270 | MtrunA17_Chr7g0228231 | 28.492 | 179 | 121 | 2 | 91 | 268 | 16 | 188 | 5.75e-21 | 89.7 |
Msa1159270 | MtrunA17_Chr7g0228891 | 42.718 | 103 | 56 | 2 | 91 | 191 | 14 | 115 | 6.01e-21 | 91.3 |
Msa1159270 | MtrunA17_Chr1g0151941 | 42.718 | 103 | 57 | 2 | 91 | 191 | 14 | 116 | 6.54e-21 | 90.9 |
Msa1159270 | MtrunA17_Chr3g0088461 | 43.636 | 110 | 60 | 2 | 83 | 191 | 17 | 125 | 6.84e-21 | 92.4 |
Msa1159270 | MtrunA17_Chr8g0385321 | 38.261 | 115 | 65 | 2 | 83 | 191 | 1 | 115 | 8.20e-21 | 91.7 |
Msa1159270 | MtrunA17_Chr5g0441131 | 40.566 | 106 | 60 | 3 | 91 | 194 | 11 | 115 | 8.25e-21 | 88.6 |
Msa1159270 | MtrunA17_Chr4g0039971 | 41.748 | 103 | 57 | 2 | 91 | 191 | 15 | 116 | 8.45e-21 | 92.0 |
Msa1159270 | MtrunA17_Chr1g0152011 | 35.971 | 139 | 80 | 3 | 91 | 220 | 14 | 152 | 1.14e-20 | 91.7 |
Msa1159270 | MtrunA17_Chr7g0240821 | 43.000 | 100 | 54 | 2 | 94 | 191 | 6 | 104 | 1.44e-20 | 89.4 |
Msa1159270 | MtrunA17_Chr8g0346561 | 36.220 | 127 | 73 | 3 | 76 | 198 | 3 | 125 | 1.44e-20 | 90.9 |
Msa1159270 | MtrunA17_Chr4g0054391 | 45.361 | 97 | 51 | 2 | 91 | 185 | 14 | 110 | 1.52e-20 | 90.5 |
Msa1159270 | MtrunA17_Chr7g0275911 | 36.134 | 119 | 70 | 2 | 83 | 195 | 1 | 119 | 1.58e-20 | 89.7 |
Msa1159270 | MtrunA17_Chr1g0167661 | 41.176 | 102 | 59 | 1 | 91 | 191 | 14 | 115 | 1.70e-20 | 89.7 |
Msa1159270 | MtrunA17_Chr4g0022881 | 41.237 | 97 | 54 | 2 | 91 | 185 | 14 | 109 | 1.94e-20 | 89.0 |
Msa1159270 | MtrunA17_Chr4g0042671 | 41.026 | 117 | 64 | 2 | 76 | 191 | 3 | 115 | 1.97e-20 | 91.7 |
Msa1159270 | MtrunA17_Chr8g0343831 | 37.500 | 112 | 69 | 1 | 87 | 197 | 6 | 117 | 1.99e-20 | 89.4 |
Msa1159270 | MtrunA17_Chr1g0186061 | 41.905 | 105 | 58 | 2 | 91 | 193 | 22 | 125 | 2.00e-20 | 89.4 |
Msa1159270 | MtrunA17_Chr3g0131121 | 32.370 | 173 | 91 | 6 | 83 | 248 | 1 | 154 | 2.62e-20 | 89.7 |
Msa1159270 | MtrunA17_Chr8g0334881 | 47.917 | 96 | 48 | 2 | 91 | 184 | 12 | 107 | 3.00e-20 | 90.1 |
Msa1159270 | MtrunA17_Chr6g0453211 | 41.237 | 97 | 56 | 1 | 91 | 186 | 14 | 110 | 3.27e-20 | 90.1 |
Msa1159270 | MtrunA17_Chr6g0453471 | 41.026 | 117 | 64 | 2 | 76 | 191 | 3 | 115 | 3.56e-20 | 90.5 |
Msa1159270 | MtrunA17_Chr7g0264641 | 39.655 | 116 | 63 | 3 | 83 | 191 | 1 | 116 | 3.79e-20 | 89.0 |
Msa1159270 | MtrunA17_Chr2g0327351 | 44.898 | 98 | 52 | 2 | 91 | 186 | 14 | 111 | 3.80e-20 | 89.7 |
Msa1159270 | MtrunA17_Chr7g0233061 | 41.379 | 116 | 57 | 3 | 71 | 186 | 169 | 273 | 3.92e-20 | 90.5 |
Msa1159270 | MtrunA17_Chr1g0194301 | 39.640 | 111 | 63 | 3 | 91 | 198 | 35 | 144 | 4.48e-20 | 89.0 |
Msa1159270 | MtrunA17_Chr4g0044421 | 40.541 | 111 | 59 | 3 | 76 | 184 | 3 | 108 | 5.02e-20 | 86.7 |
Msa1159270 | MtrunA17_Chr7g0254411 | 40.541 | 111 | 61 | 2 | 82 | 191 | 9 | 115 | 6.46e-20 | 89.4 |
Msa1159270 | MtrunA17_Chr1g0187761 | 29.200 | 250 | 120 | 8 | 91 | 333 | 14 | 213 | 6.75e-20 | 88.2 |
Msa1159270 | MtrunA17_Chr5g0440781 | 42.857 | 98 | 54 | 2 | 91 | 186 | 14 | 111 | 7.36e-20 | 86.3 |
Msa1159270 | MtrunA17_Chr5g0440761 | 41.905 | 105 | 56 | 3 | 91 | 193 | 14 | 115 | 9.24e-20 | 87.8 |
Msa1159270 | MtrunA17_Chr4g0060721 | 39.216 | 102 | 61 | 1 | 91 | 191 | 15 | 116 | 1.25e-19 | 88.6 |
Msa1159270 | MtrunA17_Chr5g0441141 | 42.857 | 98 | 54 | 2 | 91 | 186 | 14 | 111 | 1.33e-19 | 87.4 |
Msa1159270 | MtrunA17_Chr7g0217741 | 40.678 | 118 | 63 | 3 | 76 | 191 | 3 | 115 | 1.51e-19 | 87.8 |
Msa1159270 | MtrunA17_Chr3g0121241 | 38.235 | 102 | 62 | 1 | 91 | 191 | 44 | 145 | 1.82e-19 | 87.8 |
Msa1159270 | MtrunA17_Chr3g0092401 | 39.216 | 102 | 61 | 1 | 91 | 191 | 15 | 116 | 1.96e-19 | 87.8 |
Msa1159270 | MtrunA17_Chr1g0194951 | 37.288 | 118 | 67 | 3 | 76 | 191 | 3 | 115 | 2.55e-19 | 88.2 |
Msa1159270 | MtrunA17_Chr4g0013361 | 44.643 | 112 | 57 | 3 | 84 | 193 | 8 | 116 | 2.96e-19 | 87.0 |
Msa1159270 | MtrunA17_Chr7g0238651 | 39.286 | 112 | 65 | 1 | 86 | 194 | 2 | 113 | 3.08e-19 | 87.8 |
Msa1159270 | MtrunA17_Chr4g0072751 | 43.878 | 98 | 53 | 2 | 91 | 186 | 14 | 111 | 5.74e-19 | 87.0 |
Msa1159270 | MtrunA17_Chr1g0168661 | 43.000 | 100 | 54 | 2 | 87 | 184 | 19 | 117 | 6.00e-19 | 85.5 |
Msa1159270 | MtrunA17_Chr4g0068061 | 35.043 | 117 | 71 | 2 | 76 | 191 | 3 | 115 | 4.08e-18 | 84.3 |
Msa1159270 | MtrunA17_Chr5g0434901 | 53.226 | 62 | 29 | 0 | 124 | 185 | 9 | 70 | 4.35e-18 | 79.3 |
Msa1159270 | MtrunA17_Chr8g0349261 | 42.308 | 104 | 56 | 3 | 91 | 191 | 15 | 117 | 4.54e-18 | 83.6 |
Msa1159270 | MtrunA17_Chr4g0068921 | 42.268 | 97 | 55 | 1 | 91 | 186 | 26 | 122 | 5.54e-18 | 81.3 |
Msa1159270 | MtrunA17_Chr1g0194291 | 37.273 | 110 | 67 | 2 | 91 | 198 | 23 | 132 | 6.23e-18 | 82.8 |
Msa1159270 | MtrunA17_Chr3g0110351 | 41.071 | 112 | 59 | 3 | 82 | 191 | 9 | 115 | 7.08e-18 | 83.2 |
Msa1159270 | MtrunA17_Chr7g0247131 | 51.471 | 68 | 33 | 0 | 124 | 191 | 14 | 81 | 7.81e-18 | 82.4 |
Msa1159270 | MtrunA17_Chr5g0416341 | 31.944 | 144 | 76 | 2 | 94 | 228 | 29 | 159 | 8.49e-18 | 84.3 |
Msa1159270 | MtrunA17_Chr5g0434571 | 41.071 | 112 | 59 | 3 | 82 | 191 | 45 | 151 | 8.65e-18 | 83.6 |
Msa1159270 | MtrunA17_Chr2g0293911 | 39.091 | 110 | 65 | 2 | 91 | 198 | 26 | 135 | 1.15e-17 | 82.8 |
Msa1159270 | MtrunA17_Chr4g0057031 | 39.806 | 103 | 59 | 2 | 91 | 191 | 14 | 115 | 1.19e-17 | 82.0 |
Msa1159270 | MtrunA17_Chr6g0450101 | 41.053 | 95 | 55 | 1 | 91 | 184 | 16 | 110 | 1.71e-17 | 80.1 |
Msa1159270 | MtrunA17_Chr8g0362231 | 36.735 | 98 | 62 | 0 | 94 | 191 | 25 | 122 | 2.96e-17 | 82.8 |
Msa1159270 | MtrunA17_Chr7g0229101 | 50.794 | 63 | 31 | 0 | 124 | 186 | 8 | 70 | 3.63e-16 | 76.6 |
Msa1159270 | MtrunA17_Chr7g0229131 | 33.065 | 124 | 77 | 2 | 120 | 237 | 2 | 125 | 5.67e-16 | 75.1 |
Msa1159270 | MtrunA17_Chr3g0099141 | 43.902 | 82 | 45 | 1 | 91 | 171 | 42 | 123 | 7.71e-16 | 73.9 |
Msa1159270 | MtrunA17_Chr6g0487491 | 38.393 | 112 | 59 | 3 | 91 | 192 | 14 | 125 | 1.06e-15 | 76.3 |
Msa1159270 | MtrunA17_Chr5g0425591 | 45.122 | 82 | 41 | 3 | 91 | 169 | 11 | 91 | 6.25e-15 | 69.7 |
Msa1159270 | MtrunA17_Chr3g0093811 | 46.377 | 69 | 35 | 2 | 124 | 191 | 18 | 85 | 2.45e-14 | 72.4 |
Msa1159270 | MtrunA17_Chr7g0269831 | 38.739 | 111 | 63 | 2 | 82 | 191 | 9 | 115 | 5.21e-14 | 72.4 |
Msa1159270 | MtrunA17_Chr6g0483051 | 37.363 | 91 | 56 | 1 | 94 | 184 | 72 | 161 | 7.97e-14 | 72.8 |
Msa1159270 | MtrunA17_Chr2g0323321 | 41.250 | 80 | 44 | 2 | 91 | 168 | 13 | 91 | 1.46e-13 | 66.6 |
Msa1159270 | MtrunA17_Chr4g0042611 | 41.333 | 75 | 43 | 1 | 91 | 164 | 14 | 88 | 2.85e-13 | 65.1 |
Msa1159270 | MtrunA17_Chr5g0395221 | 42.667 | 75 | 42 | 1 | 91 | 164 | 14 | 88 | 3.87e-13 | 64.7 |
Msa1159270 | MtrunA17_Chr8g0342511 | 44.000 | 75 | 39 | 2 | 91 | 163 | 14 | 87 | 7.15e-13 | 64.3 |
Msa1159270 | MtrunA17_Chr8g0342531 | 41.558 | 77 | 42 | 2 | 91 | 165 | 14 | 89 | 2.23e-12 | 64.7 |
Msa1159270 | MtrunA17_Chr7g0233151 | 38.806 | 67 | 41 | 0 | 141 | 207 | 1 | 67 | 6.54e-12 | 63.5 |
Msa1159270 | MtrunA17_Chr7g0274481 | 40.000 | 85 | 50 | 1 | 92 | 176 | 8 | 91 | 6.68e-12 | 67.0 |
Msa1159270 | MtrunA17_Chr8g0342461 | 42.308 | 78 | 41 | 3 | 91 | 165 | 14 | 90 | 1.15e-11 | 62.0 |
Msa1159270 | MtrunA17_Chr6g0453751 | 41.573 | 89 | 42 | 4 | 91 | 169 | 22 | 110 | 1.83e-11 | 61.2 |
Msa1159270 | MtrunA17_Chr5g0421201 | 50.000 | 50 | 25 | 0 | 143 | 192 | 12 | 61 | 3.56e-11 | 61.6 |
Msa1159270 | MtrunA17_Chr8g0342471 | 41.026 | 78 | 42 | 3 | 91 | 165 | 14 | 90 | 3.88e-11 | 60.5 |
Msa1159270 | MtrunA17_Chr3g0104501 | 54.902 | 51 | 23 | 0 | 91 | 141 | 133 | 183 | 4.99e-11 | 61.6 |
Msa1159270 | MtrunA17_Chr3g0104491 | 48.077 | 52 | 27 | 0 | 141 | 192 | 17 | 68 | 6.88e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1159270 | AT5G17800.1 | 44.043 | 277 | 106 | 5 | 86 | 355 | 88 | 322 | 1.02e-71 | 226 |
Msa1159270 | AT1G69560.1 | 46.468 | 269 | 98 | 8 | 90 | 356 | 106 | 330 | 5.02e-70 | 222 |
Msa1159270 | AT1G69560.2 | 46.468 | 269 | 98 | 8 | 90 | 356 | 122 | 346 | 5.66e-70 | 223 |
Msa1159270 | AT1G26780.2 | 56.757 | 185 | 69 | 3 | 88 | 261 | 95 | 279 | 1.23e-66 | 214 |
Msa1159270 | AT1G26780.1 | 72.441 | 127 | 35 | 0 | 88 | 214 | 95 | 221 | 1.86e-66 | 211 |
Msa1159270 | AT1G17950.1 | 39.777 | 269 | 131 | 5 | 88 | 354 | 2 | 241 | 1.50e-61 | 198 |
Msa1159270 | AT3G29020.1 | 70.940 | 117 | 34 | 0 | 86 | 202 | 60 | 176 | 3.83e-60 | 194 |
Msa1159270 | AT3G29020.2 | 70.940 | 117 | 34 | 0 | 86 | 202 | 62 | 178 | 1.41e-59 | 194 |
Msa1159270 | AT4G33450.1 | 77.358 | 106 | 24 | 0 | 89 | 194 | 17 | 122 | 7.39e-59 | 191 |
Msa1159270 | AT1G73410.1 | 79.439 | 107 | 22 | 0 | 88 | 194 | 3 | 109 | 2.27e-57 | 187 |
Msa1159270 | AT1G73410.2 | 79.439 | 107 | 22 | 0 | 88 | 194 | 3 | 109 | 4.56e-57 | 184 |
Msa1159270 | AT5G39700.1 | 64.423 | 104 | 37 | 0 | 92 | 195 | 57 | 160 | 3.37e-43 | 148 |
Msa1159270 | AT5G67300.1 | 45.395 | 152 | 73 | 2 | 91 | 232 | 6 | 157 | 1.07e-37 | 137 |
Msa1159270 | AT4G37260.1 | 42.500 | 160 | 77 | 3 | 91 | 248 | 13 | 159 | 1.60e-37 | 137 |
Msa1159270 | AT3G55730.1 | 55.769 | 104 | 46 | 0 | 91 | 194 | 56 | 159 | 5.63e-37 | 137 |
Msa1159270 | AT2G39880.1 | 53.913 | 115 | 51 | 1 | 84 | 198 | 45 | 157 | 6.13e-37 | 137 |
Msa1159270 | AT2G23290.1 | 53.465 | 101 | 47 | 0 | 91 | 191 | 13 | 113 | 8.65e-35 | 130 |
Msa1159270 | AT3G50060.1 | 53.465 | 101 | 47 | 0 | 91 | 191 | 6 | 106 | 1.06e-34 | 129 |
Msa1159270 | AT3G09230.1 | 54.455 | 101 | 46 | 0 | 91 | 191 | 55 | 155 | 1.88e-34 | 130 |
Msa1159270 | AT3G09370.2 | 52.475 | 101 | 48 | 0 | 91 | 191 | 135 | 235 | 1.22e-31 | 125 |
Msa1159270 | AT3G09370.1 | 52.475 | 101 | 48 | 0 | 91 | 191 | 130 | 230 | 1.26e-31 | 125 |
Msa1159270 | AT3G09370.3 | 52.475 | 101 | 48 | 0 | 91 | 191 | 143 | 243 | 1.94e-31 | 124 |
Msa1159270 | AT5G02320.1 | 51.485 | 101 | 49 | 0 | 91 | 191 | 127 | 227 | 7.76e-31 | 123 |
Msa1159270 | AT5G02320.2 | 51.485 | 101 | 49 | 0 | 91 | 191 | 127 | 227 | 7.76e-31 | 123 |
Msa1159270 | AT4G32730.1 | 42.222 | 135 | 73 | 2 | 61 | 191 | 54 | 187 | 8.32e-31 | 124 |
Msa1159270 | AT4G32730.5 | 41.912 | 136 | 74 | 2 | 60 | 191 | 53 | 187 | 8.44e-31 | 124 |
Msa1159270 | AT4G32730.4 | 41.912 | 136 | 74 | 2 | 60 | 191 | 53 | 187 | 8.44e-31 | 124 |
Msa1159270 | AT4G32730.3 | 41.912 | 136 | 74 | 2 | 60 | 191 | 53 | 187 | 8.44e-31 | 124 |
Msa1159270 | AT4G32730.2 | 41.912 | 136 | 74 | 2 | 60 | 191 | 53 | 187 | 8.44e-31 | 124 |
Msa1159270 | AT5G02320.3 | 51.485 | 101 | 49 | 0 | 91 | 191 | 67 | 167 | 9.96e-31 | 122 |
Msa1159270 | AT5G11510.3 | 40.441 | 136 | 76 | 2 | 60 | 191 | 47 | 181 | 2.85e-30 | 122 |
Msa1159270 | AT5G11510.1 | 40.441 | 136 | 76 | 2 | 60 | 191 | 47 | 181 | 2.85e-30 | 122 |
Msa1159270 | AT5G11510.4 | 40.441 | 136 | 76 | 2 | 60 | 191 | 47 | 181 | 2.85e-30 | 122 |
Msa1159270 | AT5G11510.2 | 40.441 | 136 | 76 | 2 | 60 | 191 | 47 | 181 | 3.06e-30 | 122 |
Msa1159270 | AT5G11510.5 | 40.441 | 136 | 76 | 2 | 60 | 191 | 47 | 181 | 3.16e-30 | 122 |
Msa1159270 | AT5G40360.1 | 40.667 | 150 | 86 | 2 | 46 | 192 | 110 | 259 | 1.36e-29 | 117 |
Msa1159270 | AT5G58850.1 | 50.000 | 112 | 56 | 0 | 80 | 191 | 94 | 205 | 2.19e-29 | 117 |
Msa1159270 | AT5G11050.1 | 47.368 | 114 | 59 | 1 | 79 | 192 | 94 | 206 | 9.03e-29 | 115 |
Msa1159270 | AT3G27785.1 | 38.889 | 162 | 85 | 3 | 91 | 250 | 189 | 338 | 1.01e-27 | 113 |
Msa1159270 | AT2G25230.1 | 49.495 | 99 | 48 | 2 | 93 | 190 | 28 | 125 | 2.42e-27 | 108 |
Msa1159270 | AT4G18770.1 | 42.857 | 140 | 76 | 1 | 91 | 230 | 217 | 352 | 1.97e-26 | 109 |
Msa1159270 | AT3G11440.2 | 42.735 | 117 | 66 | 1 | 84 | 199 | 36 | 152 | 3.70e-26 | 109 |
Msa1159270 | AT3G11440.3 | 42.735 | 117 | 66 | 1 | 84 | 199 | 36 | 152 | 4.88e-26 | 109 |
Msa1159270 | AT3G11440.4 | 42.735 | 117 | 66 | 1 | 84 | 199 | 36 | 152 | 4.88e-26 | 109 |
Msa1159270 | AT3G11440.1 | 42.735 | 117 | 66 | 1 | 84 | 199 | 36 | 152 | 4.88e-26 | 109 |
Msa1159270 | AT3G23250.1 | 35.028 | 177 | 104 | 5 | 91 | 261 | 14 | 185 | 9.37e-26 | 105 |
Msa1159270 | AT2G26950.1 | 34.524 | 168 | 96 | 4 | 83 | 243 | 10 | 170 | 2.53e-25 | 105 |
Msa1159270 | AT5G40430.1 | 36.774 | 155 | 82 | 3 | 46 | 190 | 4 | 152 | 3.87e-25 | 102 |
Msa1159270 | AT4G28110.1 | 43.478 | 115 | 59 | 2 | 83 | 191 | 1 | 115 | 4.39e-25 | 103 |
Msa1159270 | AT2G32460.1 | 45.045 | 111 | 58 | 2 | 91 | 199 | 20 | 129 | 5.33e-25 | 105 |
Msa1159270 | AT2G32460.2 | 45.045 | 111 | 58 | 2 | 91 | 199 | 8 | 117 | 6.21e-25 | 105 |
Msa1159270 | AT1G79180.1 | 46.602 | 103 | 52 | 2 | 91 | 191 | 16 | 117 | 6.82e-25 | 102 |
Msa1159270 | AT5G40330.1 | 43.137 | 102 | 57 | 1 | 91 | 191 | 14 | 115 | 9.90e-25 | 100 |
Msa1159270 | AT3G12720.1 | 46.602 | 103 | 52 | 2 | 91 | 191 | 24 | 125 | 1.19e-24 | 102 |
Msa1159270 | AT3G48920.1 | 48.958 | 96 | 48 | 1 | 91 | 185 | 20 | 115 | 1.28e-24 | 101 |
Msa1159270 | AT4G25560.1 | 43.363 | 113 | 61 | 2 | 81 | 191 | 2 | 113 | 1.38e-24 | 102 |
Msa1159270 | AT3G27920.1 | 44.118 | 102 | 56 | 1 | 91 | 191 | 16 | 117 | 1.98e-24 | 100 |
Msa1159270 | AT5G14750.1 | 43.137 | 102 | 57 | 1 | 91 | 191 | 18 | 119 | 2.00e-24 | 99.4 |
Msa1159270 | AT5G06100.1 | 43.636 | 110 | 61 | 1 | 91 | 199 | 34 | 143 | 2.30e-24 | 103 |
Msa1159270 | AT5G06100.5 | 43.636 | 110 | 61 | 1 | 91 | 199 | 34 | 143 | 2.52e-24 | 104 |
Msa1159270 | AT5G06100.2 | 43.636 | 110 | 61 | 1 | 91 | 199 | 34 | 143 | 2.52e-24 | 104 |
Msa1159270 | AT5G06100.3 | 43.636 | 110 | 61 | 1 | 91 | 199 | 34 | 143 | 2.52e-24 | 104 |
Msa1159270 | AT5G06100.4 | 43.636 | 110 | 61 | 1 | 91 | 199 | 34 | 143 | 2.52e-24 | 104 |
Msa1159270 | AT4G26930.1 | 43.636 | 110 | 61 | 1 | 91 | 199 | 21 | 130 | 2.66e-24 | 103 |
Msa1159270 | AT1G18570.1 | 45.098 | 102 | 55 | 1 | 91 | 191 | 15 | 116 | 2.97e-24 | 102 |
Msa1159270 | AT5G56110.1 | 46.078 | 102 | 54 | 1 | 91 | 191 | 14 | 115 | 3.06e-24 | 101 |
Msa1159270 | AT4G05100.1 | 43.103 | 116 | 59 | 2 | 83 | 191 | 1 | 116 | 1.48e-23 | 99.8 |
Msa1159270 | AT1G63910.1 | 39.130 | 138 | 77 | 3 | 83 | 213 | 1 | 138 | 1.74e-23 | 100 |
Msa1159270 | AT5G65230.1 | 45.631 | 103 | 53 | 2 | 91 | 191 | 14 | 115 | 1.92e-23 | 99.4 |
Msa1159270 | AT5G10280.1 | 38.931 | 131 | 75 | 3 | 91 | 217 | 14 | 143 | 2.38e-23 | 99.4 |
Msa1159270 | AT2G31180.1 | 44.118 | 102 | 56 | 1 | 91 | 191 | 14 | 115 | 2.47e-23 | 97.8 |
Msa1159270 | AT1G56160.1 | 44.660 | 103 | 54 | 2 | 91 | 191 | 16 | 117 | 2.62e-23 | 98.6 |
Msa1159270 | AT3G28470.1 | 49.474 | 95 | 47 | 1 | 91 | 184 | 14 | 108 | 3.36e-23 | 98.6 |
Msa1159270 | AT3G13890.2 | 34.444 | 180 | 110 | 4 | 83 | 254 | 1 | 180 | 3.68e-23 | 99.4 |
Msa1159270 | AT5G54230.1 | 43.137 | 102 | 57 | 1 | 91 | 191 | 14 | 115 | 5.74e-23 | 98.2 |
Msa1159270 | AT3G30210.1 | 37.500 | 128 | 79 | 1 | 89 | 215 | 27 | 154 | 8.85e-23 | 96.7 |
Msa1159270 | AT2G26960.1 | 43.243 | 111 | 62 | 1 | 90 | 199 | 21 | 131 | 1.03e-22 | 99.0 |
Msa1159270 | AT5G62470.1 | 41.584 | 101 | 59 | 0 | 91 | 191 | 14 | 114 | 1.30e-22 | 97.8 |
Msa1159270 | AT3G12820.1 | 44.660 | 103 | 54 | 2 | 91 | 191 | 16 | 117 | 1.50e-22 | 95.1 |
Msa1159270 | AT5G52600.1 | 44.118 | 102 | 56 | 1 | 91 | 191 | 14 | 115 | 1.73e-22 | 94.4 |
Msa1159270 | AT4G00540.2 | 46.154 | 104 | 53 | 1 | 91 | 191 | 103 | 206 | 2.15e-22 | 97.8 |
Msa1159270 | AT1G74080.1 | 40.496 | 121 | 66 | 2 | 91 | 210 | 14 | 129 | 2.21e-22 | 96.7 |
Msa1159270 | AT5G61420.2 | 43.396 | 106 | 59 | 1 | 91 | 195 | 14 | 119 | 2.54e-22 | 97.1 |
Msa1159270 | AT1G16490.1 | 44.660 | 103 | 54 | 2 | 91 | 191 | 16 | 117 | 2.65e-22 | 95.5 |
Msa1159270 | AT3G13890.1 | 33.333 | 189 | 109 | 5 | 83 | 254 | 1 | 189 | 3.40e-22 | 96.7 |
Msa1159270 | AT1G09540.1 | 37.762 | 143 | 85 | 3 | 85 | 224 | 8 | 149 | 3.60e-22 | 96.7 |
Msa1159270 | AT4G17785.2 | 42.735 | 117 | 58 | 3 | 83 | 191 | 1 | 116 | 3.69e-22 | 96.3 |
Msa1159270 | AT4G17785.1 | 42.735 | 117 | 58 | 3 | 83 | 191 | 1 | 116 | 3.97e-22 | 96.3 |
Msa1159270 | AT5G60890.1 | 41.509 | 106 | 61 | 1 | 91 | 195 | 14 | 119 | 4.05e-22 | 95.5 |
Msa1159270 | AT4G00540.1 | 46.154 | 104 | 53 | 1 | 91 | 191 | 101 | 204 | 4.15e-22 | 97.4 |
Msa1159270 | AT5G52260.1 | 48.544 | 103 | 50 | 2 | 91 | 191 | 14 | 115 | 4.29e-22 | 94.7 |
Msa1159270 | AT5G57620.1 | 44.660 | 103 | 55 | 2 | 91 | 191 | 14 | 116 | 6.47e-22 | 95.5 |
Msa1159270 | AT4G01680.3 | 39.091 | 110 | 66 | 1 | 85 | 193 | 8 | 117 | 6.61e-22 | 93.6 |
Msa1159270 | AT3G47600.1 | 42.157 | 102 | 58 | 1 | 91 | 191 | 14 | 115 | 8.19e-22 | 95.1 |
Msa1159270 | AT1G74430.1 | 42.157 | 102 | 58 | 1 | 91 | 191 | 14 | 115 | 8.41e-22 | 94.0 |
Msa1159270 | AT5G55020.1 | 41.818 | 110 | 63 | 1 | 91 | 199 | 28 | 137 | 8.56e-22 | 97.1 |
Msa1159270 | AT5G07700.1 | 45.098 | 102 | 55 | 1 | 91 | 191 | 14 | 115 | 9.27e-22 | 95.1 |
Msa1159270 | AT5G07700.2 | 45.098 | 102 | 55 | 1 | 91 | 191 | 14 | 115 | 9.27e-22 | 95.1 |
Msa1159270 | AT1G06180.1 | 35.938 | 192 | 108 | 7 | 82 | 266 | 9 | 192 | 1.07e-21 | 93.2 |
Msa1159270 | AT5G23000.1 | 44.231 | 104 | 54 | 2 | 91 | 191 | 14 | 116 | 1.21e-21 | 94.7 |
Msa1159270 | AT1G34670.1 | 40.870 | 115 | 62 | 2 | 83 | 191 | 1 | 115 | 1.24e-21 | 95.1 |
Msa1159270 | AT3G02940.2 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 1.59e-21 | 94.0 |
Msa1159270 | AT3G53200.1 | 42.056 | 107 | 59 | 2 | 91 | 195 | 11 | 116 | 1.60e-21 | 92.4 |
Msa1159270 | AT4G01680.1 | 39.091 | 110 | 66 | 1 | 85 | 193 | 8 | 117 | 1.68e-21 | 94.4 |
Msa1159270 | AT5G16770.4 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 1.82e-21 | 94.0 |
Msa1159270 | AT5G16770.3 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 1.82e-21 | 94.0 |
Msa1159270 | AT1G35515.1 | 36.522 | 115 | 67 | 2 | 83 | 191 | 1 | 115 | 1.97e-21 | 91.7 |
Msa1159270 | AT1G22640.1 | 39.655 | 116 | 62 | 3 | 83 | 191 | 1 | 115 | 2.15e-21 | 92.4 |
Msa1159270 | AT4G21440.1 | 43.137 | 102 | 57 | 1 | 91 | 191 | 14 | 115 | 2.22e-21 | 94.4 |
Msa1159270 | AT4G38620.1 | 38.261 | 115 | 65 | 2 | 83 | 191 | 1 | 115 | 2.30e-21 | 92.8 |
Msa1159270 | AT3G02940.1 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 2.55e-21 | 93.6 |
Msa1159270 | AT3G02940.3 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 2.55e-21 | 93.6 |
Msa1159270 | AT5G16770.1 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 2.85e-21 | 93.6 |
Msa1159270 | AT5G16770.2 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 2.85e-21 | 93.6 |
Msa1159270 | AT5G12870.1 | 41.509 | 106 | 61 | 1 | 87 | 191 | 16 | 121 | 3.24e-21 | 92.4 |
Msa1159270 | AT3G49690.1 | 44.660 | 103 | 55 | 2 | 91 | 191 | 14 | 116 | 4.31e-21 | 92.8 |
Msa1159270 | AT5G62470.2 | 41.176 | 102 | 59 | 1 | 91 | 191 | 14 | 115 | 4.32e-21 | 93.6 |
Msa1159270 | AT5G35550.1 | 40.777 | 103 | 60 | 1 | 90 | 191 | 15 | 117 | 4.49e-21 | 91.7 |
Msa1159270 | AT4G09460.1 | 31.609 | 174 | 103 | 3 | 83 | 240 | 1 | 174 | 4.55e-21 | 91.3 |
Msa1159270 | AT1G79180.2 | 37.037 | 135 | 51 | 2 | 91 | 191 | 16 | 150 | 4.56e-21 | 92.8 |
Msa1159270 | AT1G57560.2 | 32.759 | 174 | 112 | 3 | 85 | 254 | 8 | 180 | 5.20e-21 | 92.0 |
Msa1159270 | AT5G07690.1 | 43.564 | 101 | 56 | 1 | 91 | 190 | 14 | 114 | 5.93e-21 | 92.8 |
Msa1159270 | AT1G66370.1 | 37.963 | 108 | 66 | 1 | 91 | 197 | 10 | 117 | 8.07e-21 | 90.9 |
Msa1159270 | AT5G26660.1 | 33.974 | 156 | 96 | 3 | 91 | 240 | 14 | 168 | 8.79e-21 | 92.4 |
Msa1159270 | AT1G18710.1 | 40.196 | 102 | 60 | 1 | 91 | 191 | 14 | 115 | 9.86e-21 | 90.9 |
Msa1159270 | AT3G01140.2 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 1.02e-20 | 92.4 |
Msa1159270 | AT1G57560.1 | 39.450 | 109 | 63 | 2 | 85 | 191 | 8 | 115 | 1.08e-20 | 91.7 |
Msa1159270 | AT5G15310.1 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 1.13e-20 | 91.7 |
Msa1159270 | AT3G08500.1 | 43.137 | 102 | 57 | 1 | 91 | 191 | 32 | 133 | 1.29e-20 | 92.0 |
Msa1159270 | AT5G15310.2 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 1.32e-20 | 91.3 |
Msa1159270 | AT5G65790.1 | 34.752 | 141 | 86 | 3 | 91 | 225 | 14 | 154 | 1.49e-20 | 92.0 |
Msa1159270 | AT3G46130.1 | 41.121 | 107 | 60 | 2 | 91 | 195 | 11 | 116 | 1.69e-20 | 90.1 |
Msa1159270 | AT3G01140.1 | 41.176 | 102 | 59 | 1 | 91 | 191 | 57 | 158 | 1.78e-20 | 92.0 |
Msa1159270 | AT5G59780.3 | 40.187 | 107 | 61 | 2 | 91 | 195 | 10 | 115 | 1.81e-20 | 89.4 |
Msa1159270 | AT5G15310.4 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 1.85e-20 | 89.7 |
Msa1159270 | AT5G14750.3 | 48.529 | 68 | 35 | 0 | 124 | 191 | 18 | 85 | 2.12e-20 | 87.4 |
Msa1159270 | AT4G01680.2 | 37.705 | 122 | 63 | 2 | 85 | 193 | 8 | 129 | 2.91e-20 | 90.9 |
Msa1159270 | AT3G60460.1 | 45.714 | 105 | 55 | 2 | 91 | 193 | 13 | 117 | 3.16e-20 | 90.1 |
Msa1159270 | AT5G14340.1 | 40.000 | 105 | 60 | 2 | 91 | 193 | 26 | 129 | 4.21e-20 | 89.4 |
Msa1159270 | AT2G47190.1 | 40.000 | 110 | 64 | 2 | 91 | 198 | 22 | 131 | 4.73e-20 | 89.0 |
Msa1159270 | AT1G66380.1 | 37.600 | 125 | 77 | 1 | 84 | 207 | 3 | 127 | 6.07e-20 | 85.5 |
Msa1159270 | AT1G25340.2 | 38.462 | 104 | 60 | 1 | 91 | 194 | 20 | 119 | 6.76e-20 | 89.0 |
Msa1159270 | AT3G61250.1 | 41.964 | 112 | 58 | 3 | 82 | 191 | 9 | 115 | 8.07e-20 | 89.0 |
Msa1159270 | AT1G25340.3 | 38.462 | 104 | 60 | 1 | 91 | 194 | 20 | 119 | 8.71e-20 | 89.0 |
Msa1159270 | AT3G28910.1 | 40.196 | 102 | 60 | 1 | 91 | 191 | 14 | 115 | 9.70e-20 | 89.0 |
Msa1159270 | AT1G25340.1 | 38.095 | 105 | 64 | 1 | 91 | 194 | 20 | 124 | 9.72e-20 | 88.6 |
Msa1159270 | AT2G02820.1 | 34.711 | 121 | 79 | 0 | 94 | 214 | 33 | 153 | 1.16e-19 | 90.1 |
Msa1159270 | AT2G02820.2 | 34.711 | 121 | 79 | 0 | 94 | 214 | 33 | 153 | 1.25e-19 | 90.5 |
Msa1159270 | AT4G34990.1 | 37.391 | 115 | 66 | 2 | 83 | 191 | 1 | 115 | 1.25e-19 | 87.8 |
Msa1159270 | AT2G16720.1 | 37.069 | 116 | 65 | 3 | 83 | 191 | 1 | 115 | 1.31e-19 | 87.8 |
Msa1159270 | AT2G02820.3 | 34.711 | 121 | 79 | 0 | 94 | 214 | 33 | 153 | 1.37e-19 | 89.0 |
Msa1159270 | AT1G68320.1 | 39.623 | 106 | 61 | 2 | 91 | 194 | 21 | 125 | 2.04e-19 | 87.4 |
Msa1159270 | AT1G74650.1 | 38.235 | 102 | 62 | 1 | 91 | 191 | 14 | 115 | 2.95e-19 | 87.8 |
Msa1159270 | AT1G56650.1 | 35.484 | 124 | 79 | 1 | 84 | 206 | 3 | 126 | 3.10e-19 | 86.3 |
Msa1159270 | AT2G36890.1 | 43.269 | 104 | 55 | 3 | 91 | 191 | 14 | 116 | 4.16e-19 | 87.0 |
Msa1159270 | AT2G36890.2 | 43.269 | 104 | 55 | 3 | 91 | 191 | 55 | 157 | 4.54e-19 | 87.4 |
Msa1159270 | AT1G08810.1 | 34.014 | 147 | 94 | 2 | 91 | 234 | 14 | 160 | 4.70e-19 | 86.7 |
Msa1159270 | AT5G49620.1 | 36.232 | 138 | 82 | 3 | 63 | 198 | 4 | 137 | 5.49e-19 | 86.7 |
Msa1159270 | AT5G16600.1 | 40.870 | 115 | 61 | 3 | 82 | 194 | 9 | 118 | 5.84e-19 | 87.0 |
Msa1159270 | AT3G12820.2 | 51.471 | 68 | 33 | 0 | 124 | 191 | 2 | 69 | 1.07e-18 | 83.6 |
Msa1159270 | AT3G01530.1 | 30.337 | 178 | 110 | 3 | 91 | 266 | 27 | 192 | 1.11e-18 | 84.0 |
Msa1159270 | AT3G53200.2 | 48.611 | 72 | 37 | 0 | 124 | 195 | 12 | 83 | 1.27e-18 | 83.6 |
Msa1159270 | AT4G13480.1 | 40.187 | 107 | 61 | 2 | 87 | 191 | 4 | 109 | 1.37e-18 | 84.7 |
Msa1159270 | AT3G24310.1 | 44.792 | 96 | 50 | 2 | 91 | 184 | 20 | 114 | 1.38e-18 | 85.1 |
Msa1159270 | AT3G13540.1 | 30.864 | 162 | 102 | 3 | 91 | 242 | 25 | 186 | 1.68e-18 | 84.3 |
Msa1159270 | AT5G40350.1 | 29.688 | 192 | 113 | 6 | 91 | 266 | 19 | 204 | 2.39e-18 | 83.2 |
Msa1159270 | AT4G12350.1 | 32.544 | 169 | 100 | 4 | 88 | 243 | 11 | 178 | 2.46e-18 | 84.7 |
Msa1159270 | AT1G48000.1 | 43.158 | 95 | 53 | 1 | 91 | 184 | 34 | 128 | 2.50e-18 | 83.6 |
Msa1159270 | AT1G66230.1 | 32.121 | 165 | 103 | 4 | 82 | 242 | 9 | 168 | 2.79e-18 | 84.3 |
Msa1159270 | AT5G35550.2 | 46.154 | 78 | 40 | 1 | 116 | 191 | 43 | 120 | 3.00e-18 | 84.0 |
Msa1159270 | AT3G27810.1 | 41.053 | 95 | 55 | 1 | 91 | 184 | 22 | 116 | 6.32e-18 | 82.0 |
Msa1159270 | AT4G37780.1 | 38.835 | 103 | 61 | 2 | 91 | 191 | 14 | 116 | 8.09e-18 | 83.2 |
Msa1159270 | AT1G14350.2 | 34.951 | 103 | 67 | 0 | 94 | 196 | 28 | 130 | 8.97e-18 | 84.7 |
Msa1159270 | AT1G14350.1 | 34.951 | 103 | 67 | 0 | 94 | 196 | 28 | 130 | 8.97e-18 | 84.7 |
Msa1159270 | AT4G22680.1 | 40.777 | 103 | 58 | 2 | 91 | 191 | 14 | 115 | 1.16e-17 | 82.4 |
Msa1159270 | AT3G06490.1 | 39.091 | 110 | 65 | 2 | 91 | 198 | 21 | 130 | 2.63e-17 | 82.0 |
Msa1159270 | AT2G47460.1 | 38.235 | 102 | 62 | 1 | 91 | 191 | 14 | 115 | 3.85e-17 | 82.0 |
Msa1159270 | AT5G49330.1 | 37.255 | 102 | 63 | 1 | 91 | 191 | 14 | 115 | 4.35e-17 | 81.6 |
Msa1159270 | AT5G59780.2 | 45.833 | 72 | 39 | 0 | 124 | 195 | 23 | 94 | 4.89e-17 | 79.3 |
Msa1159270 | AT3G46130.3 | 43.750 | 80 | 43 | 1 | 118 | 195 | 5 | 84 | 8.20e-17 | 79.0 |
Msa1159270 | AT1G66390.1 | 40.000 | 110 | 65 | 1 | 84 | 192 | 3 | 112 | 8.74e-17 | 79.3 |
Msa1159270 | AT3G46130.4 | 45.833 | 72 | 39 | 0 | 124 | 195 | 23 | 94 | 1.06e-16 | 79.0 |
Msa1159270 | AT3G62610.1 | 35.043 | 117 | 71 | 2 | 76 | 191 | 3 | 115 | 1.72e-16 | 80.1 |
Msa1159270 | AT5G26660.2 | 34.711 | 121 | 75 | 1 | 124 | 240 | 17 | 137 | 1.73e-16 | 79.7 |
Msa1159270 | AT3G18100.1 | 38.298 | 94 | 58 | 0 | 91 | 184 | 546 | 639 | 3.87e-16 | 80.5 |
Msa1159270 | AT3G18100.3 | 38.298 | 94 | 58 | 0 | 91 | 184 | 498 | 591 | 4.41e-16 | 80.1 |
Msa1159270 | AT3G18100.4 | 38.298 | 94 | 58 | 0 | 91 | 184 | 385 | 478 | 5.73e-16 | 79.7 |
Msa1159270 | AT3G18100.2 | 38.298 | 94 | 58 | 0 | 91 | 184 | 333 | 426 | 7.26e-16 | 79.3 |
Msa1159270 | AT2G37630.1 | 32.857 | 140 | 84 | 2 | 91 | 220 | 4 | 143 | 7.44e-16 | 78.6 |
Msa1159270 | AT5G49620.2 | 32.895 | 152 | 82 | 4 | 63 | 198 | 4 | 151 | 1.23e-15 | 77.4 |
Msa1159270 | AT5G40350.2 | 29.747 | 158 | 90 | 5 | 124 | 266 | 8 | 159 | 1.42e-15 | 74.3 |
Msa1159270 | AT1G66380.3 | 42.857 | 84 | 48 | 0 | 124 | 207 | 11 | 94 | 2.90e-15 | 71.6 |
Msa1159270 | AT3G27810.2 | 47.541 | 61 | 32 | 0 | 124 | 184 | 7 | 67 | 3.40e-15 | 73.2 |
Msa1159270 | AT5G62320.1 | 38.182 | 110 | 58 | 3 | 91 | 191 | 15 | 123 | 4.41e-15 | 74.3 |
Msa1159270 | AT3G47600.2 | 45.588 | 68 | 37 | 0 | 124 | 191 | 42 | 109 | 8.52e-15 | 74.7 |
Msa1159270 | AT3G23250.2 | 32.331 | 133 | 80 | 4 | 134 | 261 | 1 | 128 | 9.78e-14 | 70.5 |
Msa1159270 | AT1G71030.2 | 41.538 | 65 | 38 | 0 | 127 | 191 | 5 | 69 | 1.38e-13 | 68.9 |
Msa1159270 | AT1G71030.1 | 41.538 | 65 | 38 | 0 | 127 | 191 | 19 | 83 | 1.57e-13 | 68.9 |
Msa1159270 | AT5G14750.4 | 41.379 | 58 | 34 | 0 | 134 | 191 | 1 | 58 | 6.83e-13 | 65.9 |
Msa1159270 | AT5G14750.2 | 41.379 | 58 | 34 | 0 | 134 | 191 | 1 | 58 | 6.83e-13 | 65.9 |
Msa1159270 | AT1G22640.3 | 43.103 | 58 | 33 | 0 | 134 | 191 | 1 | 58 | 9.87e-12 | 63.9 |
Msa1159270 | AT1G09770.1 | 40.000 | 85 | 50 | 1 | 92 | 176 | 8 | 91 | 1.44e-11 | 66.2 |
Find 90 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTACAGTTTGTTCTATAAA+AGG | 0.209769 | 7_4:-48846290 | Msa1159270:three_prime_UTR |
TTCACCAGAAATTGAGATAT+TGG | 0.242932 | 7_4:+48846495 | None:intergenic |
CTGAATATGGTCCTCAAAAT+TGG | 0.247103 | 7_4:-48847746 | Msa1159270:CDS |
AGGTCCAATATCTCAATTTC+TGG | 0.252170 | 7_4:-48846499 | Msa1159270:CDS |
TTATCTGCTCATAAAATCTA+TGG | 0.294082 | 7_4:-48847299 | Msa1159270:CDS |
ATTGTATAAACTCCTGGTTT+TGG | 0.307076 | 7_4:-48846130 | Msa1159270:three_prime_UTR |
AAGGAGCTTGTTGCTGAATA+TGG | 0.317262 | 7_4:-48847759 | Msa1159270:CDS |
TTGTTATGCTGTGGTACTTT+TGG | 0.354798 | 7_4:-48846071 | Msa1159270:three_prime_UTR |
TTAAGTTTAGCATCTTCTAT+TGG | 0.361231 | 7_4:+48847780 | None:intergenic |
CTCTTCTTCCTCCTCAGAAA+AGG | 0.362113 | 7_4:+48847328 | None:intergenic |
TCAAGGCTATGGATCACTAA+TGG | 0.371833 | 7_4:-48846988 | Msa1159270:CDS |
AGGAGCTATACAAAGCTAAA+TGG | 0.376612 | 7_4:-48846413 | Msa1159270:exon |
AAAGCACCCATCTTCTACTT+TGG | 0.377594 | 7_4:+48847914 | None:intergenic |
ACCATCTCAAGCACCATTGA+TGG | 0.379437 | 7_4:-48847083 | Msa1159270:CDS |
AATTGAGATATTGGACCTAT+TGG | 0.389765 | 7_4:+48846504 | None:intergenic |
AGGAGTGAGTGAGAGATTAG+TGG | 0.396526 | 7_4:+48847046 | None:intergenic |
TCCTTTGACAAACCCTGAAA+AGG | 0.411626 | 7_4:-48847970 | Msa1159270:CDS |
AGCTTTGTTCTAGAGGTCAT+TGG | 0.416349 | 7_4:-48847806 | Msa1159270:CDS |
GTTTGTCAAAGGAAGAGCTT+TGG | 0.416396 | 7_4:+48847980 | None:intergenic |
AATAGAAGATGCTAAACTTA+AGG | 0.419512 | 7_4:-48847778 | Msa1159270:CDS |
ATAAAATCTATGGTAACAAA+TGG | 0.422289 | 7_4:-48847289 | Msa1159270:CDS |
AGCTCTGTTTCTGTGAAAGT+TGG | 0.422370 | 7_4:-48847837 | Msa1159270:CDS |
AACAGTGTACTGTGTATAGA+AGG | 0.441649 | 7_4:-48847181 | Msa1159270:CDS |
TATTCCTTCAACTCATCTTG+TGG | 0.441836 | 7_4:-48848006 | Msa1159270:CDS |
CCATCCAAGTCATAAAACTT+TGG | 0.446284 | 7_4:+48846030 | None:intergenic |
CAAGGCTATGGATCACTAAT+GGG | 0.446395 | 7_4:-48846987 | Msa1159270:intron |
ACAAGATGAGTTGAAGGAAT+AGG | 0.447818 | 7_4:+48848008 | None:intergenic |
TTGATTGCAGAACATCTTGA+AGG | 0.454431 | 7_4:-48847720 | Msa1159270:CDS |
CAAAGCTAAATGGTTGATAC+AGG | 0.458360 | 7_4:-48846403 | Msa1159270:exon |
AGTTGAGACATTTCCATCAA+TGG | 0.463655 | 7_4:+48847070 | None:intergenic |
TTCTCATATAGCAGAATACT+AGG | 0.469714 | 7_4:-48846102 | Msa1159270:three_prime_UTR |
ATAATAATTGTATAAACTCC+TGG | 0.469951 | 7_4:-48846136 | Msa1159270:three_prime_UTR |
ATAATGCAGTGAAGAATCAT+TGG | 0.470220 | 7_4:-48847232 | Msa1159270:CDS |
GAGAAAGTGTGGTGGCAACT+AGG | 0.473551 | 7_4:-48846666 | Msa1159270:CDS |
AGAAAGTGTGGTGGCAACTA+GGG | 0.475189 | 7_4:-48846665 | Msa1159270:CDS |
GAACATCTTGAAGGAAGATC+AGG | 0.475989 | 7_4:-48847711 | Msa1159270:intron |
ATACAGGAAGATCATGGGTT+AGG | 0.478477 | 7_4:-48846387 | Msa1159270:three_prime_UTR |
GATGGGTGCTTTGAGGTTCA+AGG | 0.478786 | 7_4:-48847903 | Msa1159270:CDS |
TTTAGGTCCAAAGTAGAAGA+TGG | 0.479793 | 7_4:-48847921 | Msa1159270:CDS |
GAATCCACAAGATGAGTTGA+AGG | 0.483859 | 7_4:+48848002 | None:intergenic |
GTTGAAGGAATAGGAGCTAA+AGG | 0.488826 | 7_4:+48848017 | None:intergenic |
CATTACCAAGTTTCAAAGAC+AGG | 0.490809 | 7_4:+48847874 | None:intergenic |
CCTTTGACAAACCCTGAAAA+GGG | 0.491757 | 7_4:-48847969 | Msa1159270:CDS |
CTGAGTCAGTTACCACCAAT+AGG | 0.493276 | 7_4:-48846519 | Msa1159270:CDS |
ACTTTGGACCTAAACATTGA+GGG | 0.493361 | 7_4:+48847930 | None:intergenic |
TACTCCAAGCTTTGTTCTAG+AGG | 0.507196 | 7_4:-48847813 | Msa1159270:CDS |
TACTTTGGACCTAAACATTG+AGG | 0.508715 | 7_4:+48847929 | None:intergenic |
TAAAATCTATGGTAACAAAT+GGG | 0.508945 | 7_4:-48847288 | Msa1159270:CDS |
GTCGAGAGTCATCAAGGCTA+TGG | 0.512571 | 7_4:-48846999 | Msa1159270:CDS |
ACTCCAAGAAAATCAATGAA+TGG | 0.522689 | 7_4:+48846436 | None:intergenic |
TGAGATATTGGACCTATTGG+TGG | 0.526375 | 7_4:+48846507 | None:intergenic |
GCAAGGGAACCGTTTGTGTT+GGG | 0.529275 | 7_4:-48846345 | Msa1159270:three_prime_UTR |
AGTAGAAGATGGGTGCTTTG+AGG | 0.530721 | 7_4:-48847910 | Msa1159270:CDS |
GAATCATTGGCATGTGATCA+TGG | 0.539113 | 7_4:-48847219 | Msa1159270:CDS |
TGTTGTTGAAAGTCTTTCAA+AGG | 0.540837 | 7_4:-48847147 | Msa1159270:CDS |
TCTGGTGAAAATGAAAATGT+TGG | 0.542696 | 7_4:-48846481 | Msa1159270:CDS |
ACAACTAGTTTAGCTGAAGA+AGG | 0.544088 | 7_4:+48847026 | None:intergenic |
TACTGTGTATAGAAGGAGAA+AGG | 0.544161 | 7_4:-48847174 | Msa1159270:CDS |
TCTCATATAGCAGAATACTA+GGG | 0.547555 | 7_4:-48846101 | Msa1159270:three_prime_UTR |
TGCAAGGGAACCGTTTGTGT+TGG | 0.549674 | 7_4:-48846346 | Msa1159270:three_prime_UTR |
TGGTTGATACAGGAAGATCA+TGG | 0.550140 | 7_4:-48846393 | Msa1159270:three_prime_UTR |
TGATCATGGCTAGAAGACAT+AGG | 0.551949 | 7_4:-48847205 | Msa1159270:CDS |
ATGACCTCTAGAACAAAGCT+TGG | 0.553743 | 7_4:+48847809 | None:intergenic |
TCCATCAATGGTGCTTGAGA+TGG | 0.557727 | 7_4:+48847082 | None:intergenic |
TAGCCTTGATGACTCTCGAC+TGG | 0.560007 | 7_4:+48847002 | None:intergenic |
GATCATGGGTTAGGAAAGTG+AGG | 0.563056 | 7_4:-48846378 | Msa1159270:three_prime_UTR |
ACTGCATTATCTGTCCTCCC+TGG | 0.564600 | 7_4:+48847245 | None:intergenic |
GATCATGGCTAGAAGACATA+GGG | 0.580957 | 7_4:-48847204 | Msa1159270:CDS |
GGGCCTTGTTTGTTATGCTG+TGG | 0.583138 | 7_4:-48846080 | Msa1159270:three_prime_UTR |
AAAGCTAATAGATGTGGTGG+TGG | 0.583743 | 7_4:-48846584 | Msa1159270:CDS |
GTTCCAGTCGAGAGTCATCA+AGG | 0.591505 | 7_4:-48847005 | Msa1159270:CDS |
AGCTTGTAAGAAGAATGAAC+AGG | 0.595462 | 7_4:-48846617 | Msa1159270:CDS |
GCTAAAGCTAATAGATGTGG+TGG | 0.598165 | 7_4:-48846587 | Msa1159270:CDS |
TATGAAAGTGATGATGACTT+AGG | 0.598889 | 7_4:-48846183 | Msa1159270:three_prime_UTR |
GTTGAACTTCTGTGAAGTCA+TGG | 0.600796 | 7_4:+48848067 | None:intergenic |
AAAGCTAAAGCTAATAGATG+TGG | 0.612393 | 7_4:-48846590 | Msa1159270:CDS |
ATGAGAAACAGTCCAAAACC+AGG | 0.613282 | 7_4:+48846118 | None:intergenic |
TATAGAACAAACTGTACACA+AGG | 0.613504 | 7_4:+48846295 | None:intergenic |
GGTTGATACAGGAAGATCAT+GGG | 0.615733 | 7_4:-48846392 | Msa1159270:three_prime_UTR |
TTAGGTCCAAAGTAGAAGAT+GGG | 0.619017 | 7_4:-48847920 | Msa1159270:CDS |
GTGAGGGTAGTCAGATGCAA+GGG | 0.623599 | 7_4:-48846361 | Msa1159270:three_prime_UTR |
AGTGAGGGTAGTCAGATGCA+AGG | 0.624309 | 7_4:-48846362 | Msa1159270:three_prime_UTR |
ATCATGGGTTAGGAAAGTGA+GGG | 0.631123 | 7_4:-48846377 | Msa1159270:three_prime_UTR |
CTCATATAGCAGAATACTAG+GGG | 0.639695 | 7_4:-48846100 | Msa1159270:three_prime_UTR |
AGACAAATCTAGAGAAAGTG+TGG | 0.652450 | 7_4:-48846677 | Msa1159270:CDS |
GTACCACAGCATAACAAACA+AGG | 0.673323 | 7_4:+48846077 | None:intergenic |
TTGTAAGAAGAATGAACAGG+TGG | 0.680203 | 7_4:-48846614 | Msa1159270:CDS |
ACTTCACAGAAGTTCAACAA+TGG | 0.689923 | 7_4:-48848062 | Msa1159270:CDS |
CAAATCTAGAGAAAGTGTGG+TGG | 0.706572 | 7_4:-48846674 | Msa1159270:CDS |
ATAGAACAAACTGTACACAA+GGG | 0.723372 | 7_4:+48846296 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTAATATTTATAAATT+GGG | - | chr7_4:48846596-48846615 | Msa1159270:CDS | 0.0% |
!!! | TTTTTTAATATTTATAAATT+GGG | - | chr7_4:48846596-48846615 | Msa1159270:CDS | 0.0% |
!!! | TTAATATTTTCTTAAAAATG+GGG | + | chr7_4:48846393-48846412 | None:intergenic | 10.0% |
!!! | CTTTAATATTTTCTTAAAAA+TGG | + | chr7_4:48846395-48846414 | None:intergenic | 10.0% |
!!! | TTAATATTTTCTTAAAAATG+GGG | + | chr7_4:48846393-48846412 | None:intergenic | 10.0% |
!!! | CTTTAATATTTTCTTAAAAA+TGG | + | chr7_4:48846395-48846414 | None:intergenic | 10.0% |
!! | TATATATTAAAATACATGCA+AGG | + | chr7_4:48846638-48846657 | None:intergenic | 15.0% |
!! | ATATTTAATAATCTCTCATT+AGG | - | chr7_4:48847107-48847126 | Msa1159270:CDS | 15.0% |
!!! | ACTATGTTTTATACTATTAT+AGG | + | chr7_4:48847133-48847152 | None:intergenic | 15.0% |
!! | TGTTATGTAACAATTAAATT+TGG | + | chr7_4:48847340-48847359 | None:intergenic | 15.0% |
!! | AATGAATTGAAGAAAAAAAT+AGG | - | chr7_4:48847818-48847837 | Msa1159270:CDS | 15.0% |
!! | TATATATTAAAATACATGCA+AGG | + | chr7_4:48846638-48846657 | None:intergenic | 15.0% |
!! | ATATTTAATAATCTCTCATT+AGG | - | chr7_4:48847107-48847126 | Msa1159270:CDS | 15.0% |
!!! | ACTATGTTTTATACTATTAT+AGG | + | chr7_4:48847133-48847152 | None:intergenic | 15.0% |
!! | TGTTATGTAACAATTAAATT+TGG | + | chr7_4:48847340-48847359 | None:intergenic | 15.0% |
!! | AATGAATTGAAGAAAAAAAT+AGG | - | chr7_4:48847818-48847837 | Msa1159270:CDS | 15.0% |
!!! | TTGTTTTCAATTTTAATTGC+AGG | - | chr7_4:48846658-48846677 | Msa1159270:CDS | 20.0% |
!! | ATAAAATCTATGGTAACAAA+TGG | - | chr7_4:48846776-48846795 | Msa1159270:intron | 20.0% |
!! | TAAAATCTATGGTAACAAAT+GGG | - | chr7_4:48846777-48846796 | Msa1159270:intron | 20.0% |
!!! | TAAAACATAGTTTTAAGTTG+CGG | - | chr7_4:48847142-48847161 | Msa1159270:CDS | 20.0% |
!! | CACTACAAATATTTATATTG+CGG | - | chr7_4:48847174-48847193 | Msa1159270:CDS | 20.0% |
!! | ATAATAATTGTATAAACTCC+TGG | - | chr7_4:48847929-48847948 | Msa1159270:CDS | 20.0% |
!!! | TTGTTTTCAATTTTAATTGC+AGG | - | chr7_4:48846658-48846677 | Msa1159270:CDS | 20.0% |
!! | ATAAAATCTATGGTAACAAA+TGG | - | chr7_4:48846776-48846795 | Msa1159270:intron | 20.0% |
!! | TAAAATCTATGGTAACAAAT+GGG | - | chr7_4:48846777-48846796 | Msa1159270:intron | 20.0% |
!!! | TAAAACATAGTTTTAAGTTG+CGG | - | chr7_4:48847142-48847161 | Msa1159270:CDS | 20.0% |
!! | CACTACAAATATTTATATTG+CGG | - | chr7_4:48847174-48847193 | Msa1159270:CDS | 20.0% |
!! | ATAATAATTGTATAAACTCC+TGG | - | chr7_4:48847929-48847948 | Msa1159270:CDS | 20.0% |
! | TTAAGTTTAGCATCTTCTAT+TGG | + | chr7_4:48846288-48846307 | None:intergenic | 25.0% |
! | AATAGAAGATGCTAAACTTA+AGG | - | chr7_4:48846287-48846306 | Msa1159270:three_prime_UTR | 25.0% |
!!! | AGGTTTTTTTGTTGATTCTT+GGG | + | chr7_4:48846720-48846739 | None:intergenic | 25.0% |
!!! | AAGGTTTTTTTGTTGATTCT+TGG | + | chr7_4:48846721-48846740 | None:intergenic | 25.0% |
! | TTATCTGCTCATAAAATCTA+TGG | - | chr7_4:48846766-48846785 | Msa1159270:intron | 25.0% |
! | CGCAATATAAATATTTGTAG+TGG | + | chr7_4:48847176-48847195 | None:intergenic | 25.0% |
! | TTTATATTGCGGTAAAATGT+AGG | - | chr7_4:48847185-48847204 | Msa1159270:CDS | 25.0% |
! | GTAACAATTAAATTTGGACA+TGG | + | chr7_4:48847334-48847353 | None:intergenic | 25.0% |
!!! | GTGAATTTTGACAAGTATTT+TGG | - | chr7_4:48847425-48847444 | Msa1159270:intron | 25.0% |
! | AGAGTTTGAATCTGAAAAAT+TGG | + | chr7_4:48847513-48847532 | None:intergenic | 25.0% |
!! | TGTACAGTTTGTTCTATAAA+AGG | - | chr7_4:48847775-48847794 | Msa1159270:CDS | 25.0% |
! | TTAAGTTTAGCATCTTCTAT+TGG | + | chr7_4:48846288-48846307 | None:intergenic | 25.0% |
! | AATAGAAGATGCTAAACTTA+AGG | - | chr7_4:48846287-48846306 | Msa1159270:three_prime_UTR | 25.0% |
!!! | AGGTTTTTTTGTTGATTCTT+GGG | + | chr7_4:48846720-48846739 | None:intergenic | 25.0% |
!!! | AAGGTTTTTTTGTTGATTCT+TGG | + | chr7_4:48846721-48846740 | None:intergenic | 25.0% |
! | TTATCTGCTCATAAAATCTA+TGG | - | chr7_4:48846766-48846785 | Msa1159270:intron | 25.0% |
! | CGCAATATAAATATTTGTAG+TGG | + | chr7_4:48847176-48847195 | None:intergenic | 25.0% |
! | TTTATATTGCGGTAAAATGT+AGG | - | chr7_4:48847185-48847204 | Msa1159270:CDS | 25.0% |
! | GTAACAATTAAATTTGGACA+TGG | + | chr7_4:48847334-48847353 | None:intergenic | 25.0% |
!!! | GTGAATTTTGACAAGTATTT+TGG | - | chr7_4:48847425-48847444 | Msa1159270:intron | 25.0% |
! | AGAGTTTGAATCTGAAAAAT+TGG | + | chr7_4:48847513-48847532 | None:intergenic | 25.0% |
!! | TGTACAGTTTGTTCTATAAA+AGG | - | chr7_4:48847775-48847794 | Msa1159270:CDS | 25.0% |
!! | AAAAACCTGTCTTTGAAACT+TGG | - | chr7_4:48846186-48846205 | Msa1159270:three_prime_UTR | 30.0% |
! | ATTTTCTTAAAAATGGGGTG+AGG | + | chr7_4:48846388-48846407 | None:intergenic | 30.0% |
! | CAACAAAAAAACCTTTTCTG+AGG | - | chr7_4:48846726-48846745 | Msa1159270:intron | 30.0% |
!! | ATAATTGCTAGACTTTTTCC+AGG | - | chr7_4:48846802-48846821 | Msa1159270:intron | 30.0% |
!! | TAATTGCTAGACTTTTTCCA+GGG | - | chr7_4:48846803-48846822 | Msa1159270:intron | 30.0% |
ATAATGCAGTGAAGAATCAT+TGG | - | chr7_4:48846833-48846852 | Msa1159270:intron | 30.0% | |
TGTTGTTGAAAGTCTTTCAA+AGG | - | chr7_4:48846918-48846937 | Msa1159270:intron | 30.0% | |
AAAGCTAAAGCTAATAGATG+TGG | - | chr7_4:48847475-48847494 | Msa1159270:intron | 30.0% | |
TTGAATCTGAAAAATTGGAC+TGG | + | chr7_4:48847508-48847527 | None:intergenic | 30.0% | |
AATTGAGATATTGGACCTAT+TGG | + | chr7_4:48847564-48847583 | None:intergenic | 30.0% | |
TTCACCAGAAATTGAGATAT+TGG | + | chr7_4:48847573-48847592 | None:intergenic | 30.0% | |
TCTGGTGAAAATGAAAATGT+TGG | - | chr7_4:48847584-48847603 | Msa1159270:intron | 30.0% | |
!!! | CTACCATTCATTGATTTTCT+TGG | - | chr7_4:48847626-48847645 | Msa1159270:intron | 30.0% |
ACTCCAAGAAAATCAATGAA+TGG | + | chr7_4:48847632-48847651 | None:intergenic | 30.0% | |
!!! | TTCATTGATTTTCTTGGAGT+AGG | - | chr7_4:48847632-48847651 | Msa1159270:intron | 30.0% |
ATAGAACAAACTGTACACAA+GGG | + | chr7_4:48847772-48847791 | None:intergenic | 30.0% | |
TATAGAACAAACTGTACACA+AGG | + | chr7_4:48847773-48847792 | None:intergenic | 30.0% | |
! | TATGAAAGTGATGATGACTT+AGG | - | chr7_4:48847882-48847901 | Msa1159270:CDS | 30.0% |
! | ATTGTATAAACTCCTGGTTT+TGG | - | chr7_4:48847935-48847954 | Msa1159270:CDS | 30.0% |
TTCTCATATAGCAGAATACT+AGG | - | chr7_4:48847963-48847982 | Msa1159270:CDS | 30.0% | |
TCTCATATAGCAGAATACTA+GGG | - | chr7_4:48847964-48847983 | Msa1159270:CDS | 30.0% | |
!! | AAAAACCTGTCTTTGAAACT+TGG | - | chr7_4:48846186-48846205 | Msa1159270:three_prime_UTR | 30.0% |
! | ATTTTCTTAAAAATGGGGTG+AGG | + | chr7_4:48846388-48846407 | None:intergenic | 30.0% |
! | CAACAAAAAAACCTTTTCTG+AGG | - | chr7_4:48846726-48846745 | Msa1159270:intron | 30.0% |
!! | ATAATTGCTAGACTTTTTCC+AGG | - | chr7_4:48846802-48846821 | Msa1159270:intron | 30.0% |
!! | TAATTGCTAGACTTTTTCCA+GGG | - | chr7_4:48846803-48846822 | Msa1159270:intron | 30.0% |
ATAATGCAGTGAAGAATCAT+TGG | - | chr7_4:48846833-48846852 | Msa1159270:intron | 30.0% | |
TGTTGTTGAAAGTCTTTCAA+AGG | - | chr7_4:48846918-48846937 | Msa1159270:intron | 30.0% | |
AAAGCTAAAGCTAATAGATG+TGG | - | chr7_4:48847475-48847494 | Msa1159270:intron | 30.0% | |
TTGAATCTGAAAAATTGGAC+TGG | + | chr7_4:48847508-48847527 | None:intergenic | 30.0% | |
AATTGAGATATTGGACCTAT+TGG | + | chr7_4:48847564-48847583 | None:intergenic | 30.0% | |
TTCACCAGAAATTGAGATAT+TGG | + | chr7_4:48847573-48847592 | None:intergenic | 30.0% | |
TCTGGTGAAAATGAAAATGT+TGG | - | chr7_4:48847584-48847603 | Msa1159270:intron | 30.0% | |
!!! | CTACCATTCATTGATTTTCT+TGG | - | chr7_4:48847626-48847645 | Msa1159270:intron | 30.0% |
ACTCCAAGAAAATCAATGAA+TGG | + | chr7_4:48847632-48847651 | None:intergenic | 30.0% | |
!!! | TTCATTGATTTTCTTGGAGT+AGG | - | chr7_4:48847632-48847651 | Msa1159270:intron | 30.0% |
ATAGAACAAACTGTACACAA+GGG | + | chr7_4:48847772-48847791 | None:intergenic | 30.0% | |
TATAGAACAAACTGTACACA+AGG | + | chr7_4:48847773-48847792 | None:intergenic | 30.0% | |
! | TATGAAAGTGATGATGACTT+AGG | - | chr7_4:48847882-48847901 | Msa1159270:CDS | 30.0% |
! | ATTGTATAAACTCCTGGTTT+TGG | - | chr7_4:48847935-48847954 | Msa1159270:CDS | 30.0% |
TTCTCATATAGCAGAATACT+AGG | - | chr7_4:48847963-48847982 | Msa1159270:CDS | 30.0% | |
TCTCATATAGCAGAATACTA+GGG | - | chr7_4:48847964-48847983 | Msa1159270:CDS | 30.0% | |
ACTTCACAGAAGTTCAACAA+TGG | - | chr7_4:48846003-48846022 | Msa1159270:three_prime_UTR | 35.0% | |
! | ACAAGATGAGTTGAAGGAAT+AGG | + | chr7_4:48846060-48846079 | None:intergenic | 35.0% |
TATTCCTTCAACTCATCTTG+TGG | - | chr7_4:48846059-48846078 | Msa1159270:three_prime_UTR | 35.0% | |
! | AAATCTGAAGACCCTTTTCA+GGG | + | chr7_4:48846110-48846129 | None:intergenic | 35.0% |
! | AAAATCTGAAGACCCTTTTC+AGG | + | chr7_4:48846111-48846130 | None:intergenic | 35.0% |
!!! | TTTTGAGACCCTCAATGTTT+AGG | - | chr7_4:48846127-48846146 | Msa1159270:three_prime_UTR | 35.0% |
ACTTTGGACCTAAACATTGA+GGG | + | chr7_4:48846138-48846157 | None:intergenic | 35.0% | |
TACTTTGGACCTAAACATTG+AGG | + | chr7_4:48846139-48846158 | None:intergenic | 35.0% | |
TTTAGGTCCAAAGTAGAAGA+TGG | - | chr7_4:48846144-48846163 | Msa1159270:three_prime_UTR | 35.0% | |
TTAGGTCCAAAGTAGAAGAT+GGG | - | chr7_4:48846145-48846164 | Msa1159270:three_prime_UTR | 35.0% | |
CATTACCAAGTTTCAAAGAC+AGG | + | chr7_4:48846194-48846213 | None:intergenic | 35.0% | |
CTGAATATGGTCCTCAAAAT+TGG | - | chr7_4:48846319-48846338 | Msa1159270:three_prime_UTR | 35.0% | |
! | GCAATCAAGTTCCAATTTTG+AGG | + | chr7_4:48846333-48846352 | None:intergenic | 35.0% |
TTGATTGCAGAACATCTTGA+AGG | - | chr7_4:48846345-48846364 | Msa1159270:three_prime_UTR | 35.0% | |
!! | TTCTAGAGTAAGTGCATGTT+TGG | - | chr7_4:48846431-48846450 | Msa1159270:CDS | 35.0% |
GTAAGTGCATGTTTGGATTT+AGG | - | chr7_4:48846438-48846457 | Msa1159270:CDS | 35.0% | |
CAGGAAAAAGTTGTAGATTG+AGG | - | chr7_4:48846677-48846696 | Msa1159270:CDS | 35.0% | |
GAAAAAGTTGTAGATTGAGG+TGG | - | chr7_4:48846680-48846699 | Msa1159270:intron | 35.0% | |
!! | CAAAAAAACCTTTTCTGAGG+AGG | - | chr7_4:48846729-48846748 | Msa1159270:intron | 35.0% |
AACAGTGTACTGTGTATAGA+AGG | - | chr7_4:48846884-48846903 | Msa1159270:intron | 35.0% | |
TACTGTGTATAGAAGGAGAA+AGG | - | chr7_4:48846891-48846910 | Msa1159270:intron | 35.0% | |
AGTTGAGACATTTCCATCAA+TGG | + | chr7_4:48846998-48847017 | None:intergenic | 35.0% | |
! | ACAACTAGTTTAGCTGAAGA+AGG | + | chr7_4:48847042-48847061 | None:intergenic | 35.0% |
! | AATTGTAAATGCGAAGGCAT+CGG | + | chr7_4:48847219-48847238 | None:intergenic | 35.0% |
CATCACAATTGTAAATGCGA+AGG | + | chr7_4:48847225-48847244 | None:intergenic | 35.0% | |
AGACAAATCTAGAGAAAGTG+TGG | - | chr7_4:48847388-48847407 | Msa1159270:CDS | 35.0% | |
AGCTTGTAAGAAGAATGAAC+AGG | - | chr7_4:48847448-48847467 | Msa1159270:intron | 35.0% | |
TTGTAAGAAGAATGAACAGG+TGG | - | chr7_4:48847451-48847470 | Msa1159270:intron | 35.0% | |
AGGTCCAATATCTCAATTTC+TGG | - | chr7_4:48847566-48847585 | Msa1159270:intron | 35.0% | |
AGGAGCTATACAAAGCTAAA+TGG | - | chr7_4:48847652-48847671 | Msa1159270:intron | 35.0% | |
! | CAAAGCTAAATGGTTGATAC+AGG | - | chr7_4:48847662-48847681 | Msa1159270:intron | 35.0% |
! | TCATTTTCACCCAACACAAA+CGG | + | chr7_4:48847732-48847751 | None:intergenic | 35.0% |
CTCATATAGCAGAATACTAG+GGG | - | chr7_4:48847965-48847984 | Msa1159270:CDS | 35.0% | |
! | TTGTTATGCTGTGGTACTTT+TGG | - | chr7_4:48847994-48848013 | Msa1159270:CDS | 35.0% |
!! | GAAGCCAAAGTTTTATGACT+TGG | - | chr7_4:48848031-48848050 | Msa1159270:CDS | 35.0% |
CCATCCAAGTCATAAAACTT+TGG | + | chr7_4:48848038-48848057 | None:intergenic | 35.0% | |
!! | CCAAAGTTTTATGACTTGGA+TGG | - | chr7_4:48848035-48848054 | Msa1159270:CDS | 35.0% |
!! | AGTTTTATGACTTGGATGGA+TGG | - | chr7_4:48848039-48848058 | Msa1159270:CDS | 35.0% |
ACTTCACAGAAGTTCAACAA+TGG | - | chr7_4:48846003-48846022 | Msa1159270:three_prime_UTR | 35.0% | |
! | ACAAGATGAGTTGAAGGAAT+AGG | + | chr7_4:48846060-48846079 | None:intergenic | 35.0% |
TATTCCTTCAACTCATCTTG+TGG | - | chr7_4:48846059-48846078 | Msa1159270:three_prime_UTR | 35.0% | |
! | AAATCTGAAGACCCTTTTCA+GGG | + | chr7_4:48846110-48846129 | None:intergenic | 35.0% |
! | AAAATCTGAAGACCCTTTTC+AGG | + | chr7_4:48846111-48846130 | None:intergenic | 35.0% |
!!! | TTTTGAGACCCTCAATGTTT+AGG | - | chr7_4:48846127-48846146 | Msa1159270:three_prime_UTR | 35.0% |
ACTTTGGACCTAAACATTGA+GGG | + | chr7_4:48846138-48846157 | None:intergenic | 35.0% | |
TACTTTGGACCTAAACATTG+AGG | + | chr7_4:48846139-48846158 | None:intergenic | 35.0% | |
TTTAGGTCCAAAGTAGAAGA+TGG | - | chr7_4:48846144-48846163 | Msa1159270:three_prime_UTR | 35.0% | |
TTAGGTCCAAAGTAGAAGAT+GGG | - | chr7_4:48846145-48846164 | Msa1159270:three_prime_UTR | 35.0% | |
CATTACCAAGTTTCAAAGAC+AGG | + | chr7_4:48846194-48846213 | None:intergenic | 35.0% | |
CTGAATATGGTCCTCAAAAT+TGG | - | chr7_4:48846319-48846338 | Msa1159270:three_prime_UTR | 35.0% | |
! | GCAATCAAGTTCCAATTTTG+AGG | + | chr7_4:48846333-48846352 | None:intergenic | 35.0% |
TTGATTGCAGAACATCTTGA+AGG | - | chr7_4:48846345-48846364 | Msa1159270:three_prime_UTR | 35.0% | |
!! | TTCTAGAGTAAGTGCATGTT+TGG | - | chr7_4:48846431-48846450 | Msa1159270:CDS | 35.0% |
GTAAGTGCATGTTTGGATTT+AGG | - | chr7_4:48846438-48846457 | Msa1159270:CDS | 35.0% | |
CAGGAAAAAGTTGTAGATTG+AGG | - | chr7_4:48846677-48846696 | Msa1159270:CDS | 35.0% | |
GAAAAAGTTGTAGATTGAGG+TGG | - | chr7_4:48846680-48846699 | Msa1159270:intron | 35.0% | |
!! | CAAAAAAACCTTTTCTGAGG+AGG | - | chr7_4:48846729-48846748 | Msa1159270:intron | 35.0% |
AACAGTGTACTGTGTATAGA+AGG | - | chr7_4:48846884-48846903 | Msa1159270:intron | 35.0% | |
TACTGTGTATAGAAGGAGAA+AGG | - | chr7_4:48846891-48846910 | Msa1159270:intron | 35.0% | |
AGTTGAGACATTTCCATCAA+TGG | + | chr7_4:48846998-48847017 | None:intergenic | 35.0% | |
! | ACAACTAGTTTAGCTGAAGA+AGG | + | chr7_4:48847042-48847061 | None:intergenic | 35.0% |
! | AATTGTAAATGCGAAGGCAT+CGG | + | chr7_4:48847219-48847238 | None:intergenic | 35.0% |
CATCACAATTGTAAATGCGA+AGG | + | chr7_4:48847225-48847244 | None:intergenic | 35.0% | |
AGACAAATCTAGAGAAAGTG+TGG | - | chr7_4:48847388-48847407 | Msa1159270:CDS | 35.0% | |
AGCTTGTAAGAAGAATGAAC+AGG | - | chr7_4:48847448-48847467 | Msa1159270:intron | 35.0% | |
TTGTAAGAAGAATGAACAGG+TGG | - | chr7_4:48847451-48847470 | Msa1159270:intron | 35.0% | |
AGGTCCAATATCTCAATTTC+TGG | - | chr7_4:48847566-48847585 | Msa1159270:intron | 35.0% | |
AGGAGCTATACAAAGCTAAA+TGG | - | chr7_4:48847652-48847671 | Msa1159270:intron | 35.0% | |
! | CAAAGCTAAATGGTTGATAC+AGG | - | chr7_4:48847662-48847681 | Msa1159270:intron | 35.0% |
! | TCATTTTCACCCAACACAAA+CGG | + | chr7_4:48847732-48847751 | None:intergenic | 35.0% |
CTCATATAGCAGAATACTAG+GGG | - | chr7_4:48847965-48847984 | Msa1159270:CDS | 35.0% | |
! | TTGTTATGCTGTGGTACTTT+TGG | - | chr7_4:48847994-48848013 | Msa1159270:CDS | 35.0% |
!! | GAAGCCAAAGTTTTATGACT+TGG | - | chr7_4:48848031-48848050 | Msa1159270:CDS | 35.0% |
CCATCCAAGTCATAAAACTT+TGG | + | chr7_4:48848038-48848057 | None:intergenic | 35.0% | |
!! | CCAAAGTTTTATGACTTGGA+TGG | - | chr7_4:48848035-48848054 | Msa1159270:CDS | 35.0% |
!! | AGTTTTATGACTTGGATGGA+TGG | - | chr7_4:48848039-48848058 | Msa1159270:CDS | 35.0% |
GTTGAAGGAATAGGAGCTAA+AGG | + | chr7_4:48846051-48846070 | None:intergenic | 40.0% | |
! | GAATCCACAAGATGAGTTGA+AGG | + | chr7_4:48846066-48846085 | None:intergenic | 40.0% |
GTTTGTCAAAGGAAGAGCTT+TGG | + | chr7_4:48846088-48846107 | None:intergenic | 40.0% | |
TCCTTTGACAAACCCTGAAA+AGG | - | chr7_4:48846095-48846114 | Msa1159270:three_prime_UTR | 40.0% | |
CCTTTGACAAACCCTGAAAA+GGG | - | chr7_4:48846096-48846115 | Msa1159270:three_prime_UTR | 40.0% | |
! | AAAGCACCCATCTTCTACTT+TGG | + | chr7_4:48846154-48846173 | None:intergenic | 40.0% |
!! | AGCTCTGTTTCTGTGAAAGT+TGG | - | chr7_4:48846228-48846247 | Msa1159270:three_prime_UTR | 40.0% |
!! | TACTCCAAGCTTTGTTCTAG+AGG | - | chr7_4:48846252-48846271 | Msa1159270:three_prime_UTR | 40.0% |
!! | ATGACCTCTAGAACAAAGCT+TGG | + | chr7_4:48846259-48846278 | None:intergenic | 40.0% |
!! | AGCTTTGTTCTAGAGGTCAT+TGG | - | chr7_4:48846259-48846278 | Msa1159270:three_prime_UTR | 40.0% |
!! | AAGGAGCTTGTTGCTGAATA+TGG | - | chr7_4:48846306-48846325 | Msa1159270:three_prime_UTR | 40.0% |
GAACATCTTGAAGGAAGATC+AGG | - | chr7_4:48846354-48846373 | Msa1159270:three_prime_UTR | 40.0% | |
TCATCACTTTGTGACACAAC+AGG | + | chr7_4:48846480-48846499 | None:intergenic | 40.0% | |
GAATCATTGGCATGTGATCA+TGG | - | chr7_4:48846846-48846865 | Msa1159270:intron | 40.0% | |
TGATCATGGCTAGAAGACAT+AGG | - | chr7_4:48846860-48846879 | Msa1159270:intron | 40.0% | |
GATCATGGCTAGAAGACATA+GGG | - | chr7_4:48846861-48846880 | Msa1159270:intron | 40.0% | |
TCAAGGCTATGGATCACTAA+TGG | - | chr7_4:48847077-48847096 | Msa1159270:CDS | 40.0% | |
CAAGGCTATGGATCACTAAT+GGG | - | chr7_4:48847078-48847097 | Msa1159270:CDS | 40.0% | |
TGCGGTAAAATGTAGGCAAA+TGG | - | chr7_4:48847192-48847211 | Msa1159270:CDS | 40.0% | |
GCGGTAAAATGTAGGCAAAT+GGG | - | chr7_4:48847193-48847212 | Msa1159270:CDS | 40.0% | |
! | GTATGTTTAGAATCACGACG+AGG | - | chr7_4:48847265-48847284 | Msa1159270:CDS | 40.0% |
! | CAAATCTAGAGAAAGTGTGG+TGG | - | chr7_4:48847391-48847410 | Msa1159270:intron | 40.0% |
GCTAAAGCTAATAGATGTGG+TGG | - | chr7_4:48847478-48847497 | Msa1159270:intron | 40.0% | |
AAAGCTAATAGATGTGGTGG+TGG | - | chr7_4:48847481-48847500 | Msa1159270:intron | 40.0% | |
TGAGATATTGGACCTATTGG+TGG | + | chr7_4:48847561-48847580 | None:intergenic | 40.0% | |
! | TGGTTGATACAGGAAGATCA+TGG | - | chr7_4:48847672-48847691 | Msa1159270:intron | 40.0% |
! | GGTTGATACAGGAAGATCAT+GGG | - | chr7_4:48847673-48847692 | Msa1159270:intron | 40.0% |
ATACAGGAAGATCATGGGTT+AGG | - | chr7_4:48847678-48847697 | Msa1159270:intron | 40.0% | |
!! | ATCATGGGTTAGGAAAGTGA+GGG | - | chr7_4:48847688-48847707 | Msa1159270:intron | 40.0% |
ATGAGAAACAGTCCAAAACC+AGG | + | chr7_4:48847950-48847969 | None:intergenic | 40.0% | |
GTACCACAGCATAACAAACA+AGG | + | chr7_4:48847991-48848010 | None:intergenic | 40.0% | |
GTTGAAGGAATAGGAGCTAA+AGG | + | chr7_4:48846051-48846070 | None:intergenic | 40.0% | |
! | GAATCCACAAGATGAGTTGA+AGG | + | chr7_4:48846066-48846085 | None:intergenic | 40.0% |
GTTTGTCAAAGGAAGAGCTT+TGG | + | chr7_4:48846088-48846107 | None:intergenic | 40.0% | |
TCCTTTGACAAACCCTGAAA+AGG | - | chr7_4:48846095-48846114 | Msa1159270:three_prime_UTR | 40.0% | |
CCTTTGACAAACCCTGAAAA+GGG | - | chr7_4:48846096-48846115 | Msa1159270:three_prime_UTR | 40.0% | |
! | AAAGCACCCATCTTCTACTT+TGG | + | chr7_4:48846154-48846173 | None:intergenic | 40.0% |
!! | AGCTCTGTTTCTGTGAAAGT+TGG | - | chr7_4:48846228-48846247 | Msa1159270:three_prime_UTR | 40.0% |
!! | TACTCCAAGCTTTGTTCTAG+AGG | - | chr7_4:48846252-48846271 | Msa1159270:three_prime_UTR | 40.0% |
!! | ATGACCTCTAGAACAAAGCT+TGG | + | chr7_4:48846259-48846278 | None:intergenic | 40.0% |
!! | AGCTTTGTTCTAGAGGTCAT+TGG | - | chr7_4:48846259-48846278 | Msa1159270:three_prime_UTR | 40.0% |
!! | AAGGAGCTTGTTGCTGAATA+TGG | - | chr7_4:48846306-48846325 | Msa1159270:three_prime_UTR | 40.0% |
GAACATCTTGAAGGAAGATC+AGG | - | chr7_4:48846354-48846373 | Msa1159270:three_prime_UTR | 40.0% | |
TCATCACTTTGTGACACAAC+AGG | + | chr7_4:48846480-48846499 | None:intergenic | 40.0% | |
GAATCATTGGCATGTGATCA+TGG | - | chr7_4:48846846-48846865 | Msa1159270:intron | 40.0% | |
TGATCATGGCTAGAAGACAT+AGG | - | chr7_4:48846860-48846879 | Msa1159270:intron | 40.0% | |
GATCATGGCTAGAAGACATA+GGG | - | chr7_4:48846861-48846880 | Msa1159270:intron | 40.0% | |
TCAAGGCTATGGATCACTAA+TGG | - | chr7_4:48847077-48847096 | Msa1159270:CDS | 40.0% | |
CAAGGCTATGGATCACTAAT+GGG | - | chr7_4:48847078-48847097 | Msa1159270:CDS | 40.0% | |
TGCGGTAAAATGTAGGCAAA+TGG | - | chr7_4:48847192-48847211 | Msa1159270:CDS | 40.0% | |
GCGGTAAAATGTAGGCAAAT+GGG | - | chr7_4:48847193-48847212 | Msa1159270:CDS | 40.0% | |
! | GTATGTTTAGAATCACGACG+AGG | - | chr7_4:48847265-48847284 | Msa1159270:CDS | 40.0% |
! | CAAATCTAGAGAAAGTGTGG+TGG | - | chr7_4:48847391-48847410 | Msa1159270:intron | 40.0% |
GCTAAAGCTAATAGATGTGG+TGG | - | chr7_4:48847478-48847497 | Msa1159270:intron | 40.0% | |
AAAGCTAATAGATGTGGTGG+TGG | - | chr7_4:48847481-48847500 | Msa1159270:intron | 40.0% | |
TGAGATATTGGACCTATTGG+TGG | + | chr7_4:48847561-48847580 | None:intergenic | 40.0% | |
! | TGGTTGATACAGGAAGATCA+TGG | - | chr7_4:48847672-48847691 | Msa1159270:intron | 40.0% |
! | GGTTGATACAGGAAGATCAT+GGG | - | chr7_4:48847673-48847692 | Msa1159270:intron | 40.0% |
ATACAGGAAGATCATGGGTT+AGG | - | chr7_4:48847678-48847697 | Msa1159270:intron | 40.0% | |
!! | ATCATGGGTTAGGAAAGTGA+GGG | - | chr7_4:48847688-48847707 | Msa1159270:intron | 40.0% |
ATGAGAAACAGTCCAAAACC+AGG | + | chr7_4:48847950-48847969 | None:intergenic | 40.0% | |
GTACCACAGCATAACAAACA+AGG | + | chr7_4:48847991-48848010 | None:intergenic | 40.0% | |
!! | CCCTTTTCAGGGTTTGTCAA+AGG | + | chr7_4:48846099-48846118 | None:intergenic | 45.0% |
AGTAGAAGATGGGTGCTTTG+AGG | - | chr7_4:48846155-48846174 | Msa1159270:three_prime_UTR | 45.0% | |
CTCTTCTTCCTCCTCAGAAA+AGG | + | chr7_4:48846740-48846759 | None:intergenic | 45.0% | |
!! | TTGCTAGACTTTTTCCAGGG+AGG | - | chr7_4:48846806-48846825 | Msa1159270:intron | 45.0% |
ACCATCTCAAGCACCATTGA+TGG | - | chr7_4:48846982-48847001 | Msa1159270:intron | 45.0% | |
TCCATCAATGGTGCTTGAGA+TGG | + | chr7_4:48846986-48847005 | None:intergenic | 45.0% | |
AGGAGTGAGTGAGAGATTAG+TGG | + | chr7_4:48847022-48847041 | None:intergenic | 45.0% | |
! | AGAAAGTGTGGTGGCAACTA+GGG | - | chr7_4:48847400-48847419 | Msa1159270:intron | 45.0% |
CTGAGTCAGTTACCACCAAT+AGG | - | chr7_4:48847546-48847565 | Msa1159270:intron | 45.0% | |
!! | GATCATGGGTTAGGAAAGTG+AGG | - | chr7_4:48847687-48847706 | Msa1159270:intron | 45.0% |
!! | CCCTTTTCAGGGTTTGTCAA+AGG | + | chr7_4:48846099-48846118 | None:intergenic | 45.0% |
AGTAGAAGATGGGTGCTTTG+AGG | - | chr7_4:48846155-48846174 | Msa1159270:three_prime_UTR | 45.0% | |
CTCTTCTTCCTCCTCAGAAA+AGG | + | chr7_4:48846740-48846759 | None:intergenic | 45.0% | |
!! | TTGCTAGACTTTTTCCAGGG+AGG | - | chr7_4:48846806-48846825 | Msa1159270:intron | 45.0% |
ACCATCTCAAGCACCATTGA+TGG | - | chr7_4:48846982-48847001 | Msa1159270:intron | 45.0% | |
TCCATCAATGGTGCTTGAGA+TGG | + | chr7_4:48846986-48847005 | None:intergenic | 45.0% | |
AGGAGTGAGTGAGAGATTAG+TGG | + | chr7_4:48847022-48847041 | None:intergenic | 45.0% | |
! | AGAAAGTGTGGTGGCAACTA+GGG | - | chr7_4:48847400-48847419 | Msa1159270:intron | 45.0% |
CTGAGTCAGTTACCACCAAT+AGG | - | chr7_4:48847546-48847565 | Msa1159270:intron | 45.0% | |
!! | GATCATGGGTTAGGAAAGTG+AGG | - | chr7_4:48847687-48847706 | Msa1159270:intron | 45.0% |
!!! | TTTAATATTTTCTTAAAAAT+GGG | + | chr7_4:48846394-48846413 | None:intergenic | 5.0% |
!!! | CTTTTTTAATATTTATAAAT+TGG | - | chr7_4:48846595-48846614 | Msa1159270:CDS | 5.0% |
!!! | TTTTTAATATTTATAAATTG+GGG | - | chr7_4:48846597-48846616 | Msa1159270:CDS | 5.0% |
!!! | TTTAATATTTTCTTAAAAAT+GGG | + | chr7_4:48846394-48846413 | None:intergenic | 5.0% |
!!! | CTTTTTTAATATTTATAAAT+TGG | - | chr7_4:48846595-48846614 | Msa1159270:CDS | 5.0% |
!!! | TTTTTAATATTTATAAATTG+GGG | - | chr7_4:48846597-48846616 | Msa1159270:CDS | 5.0% |
!! | GATGGGTGCTTTGAGGTTCA+AGG | - | chr7_4:48846162-48846181 | Msa1159270:three_prime_UTR | 50.0% |
ACTGCATTATCTGTCCTCCC+TGG | + | chr7_4:48846823-48846842 | None:intergenic | 50.0% | |
GTTCCAGTCGAGAGTCATCA+AGG | - | chr7_4:48847060-48847079 | Msa1159270:CDS | 50.0% | |
! | TAGCCTTGATGACTCTCGAC+TGG | + | chr7_4:48847066-48847085 | None:intergenic | 50.0% |
GTCGAGAGTCATCAAGGCTA+TGG | - | chr7_4:48847066-48847085 | Msa1159270:CDS | 50.0% | |
AGAATCACGACGAGGTTCAC+AGG | - | chr7_4:48847273-48847292 | Msa1159270:CDS | 50.0% | |
! | GAGAAAGTGTGGTGGCAACT+AGG | - | chr7_4:48847399-48847418 | Msa1159270:intron | 50.0% |
AGTGAGGGTAGTCAGATGCA+AGG | - | chr7_4:48847703-48847722 | Msa1159270:intron | 50.0% | |
GTGAGGGTAGTCAGATGCAA+GGG | - | chr7_4:48847704-48847723 | Msa1159270:intron | 50.0% | |
TGCAAGGGAACCGTTTGTGT+TGG | - | chr7_4:48847719-48847738 | Msa1159270:CDS | 50.0% | |
GCAAGGGAACCGTTTGTGTT+GGG | - | chr7_4:48847720-48847739 | Msa1159270:CDS | 50.0% | |
!! | GGGCCTTGTTTGTTATGCTG+TGG | - | chr7_4:48847985-48848004 | Msa1159270:CDS | 50.0% |
!! | GATGGGTGCTTTGAGGTTCA+AGG | - | chr7_4:48846162-48846181 | Msa1159270:three_prime_UTR | 50.0% |
ACTGCATTATCTGTCCTCCC+TGG | + | chr7_4:48846823-48846842 | None:intergenic | 50.0% | |
GTTCCAGTCGAGAGTCATCA+AGG | - | chr7_4:48847060-48847079 | Msa1159270:CDS | 50.0% | |
! | TAGCCTTGATGACTCTCGAC+TGG | + | chr7_4:48847066-48847085 | None:intergenic | 50.0% |
GTCGAGAGTCATCAAGGCTA+TGG | - | chr7_4:48847066-48847085 | Msa1159270:CDS | 50.0% | |
AGAATCACGACGAGGTTCAC+AGG | - | chr7_4:48847273-48847292 | Msa1159270:CDS | 50.0% | |
! | GAGAAAGTGTGGTGGCAACT+AGG | - | chr7_4:48847399-48847418 | Msa1159270:intron | 50.0% |
AGTGAGGGTAGTCAGATGCA+AGG | - | chr7_4:48847703-48847722 | Msa1159270:intron | 50.0% | |
GTGAGGGTAGTCAGATGCAA+GGG | - | chr7_4:48847704-48847723 | Msa1159270:intron | 50.0% | |
TGCAAGGGAACCGTTTGTGT+TGG | - | chr7_4:48847719-48847738 | Msa1159270:CDS | 50.0% | |
GCAAGGGAACCGTTTGTGTT+GGG | - | chr7_4:48847720-48847739 | Msa1159270:CDS | 50.0% | |
!! | GGGCCTTGTTTGTTATGCTG+TGG | - | chr7_4:48847985-48848004 | Msa1159270:CDS | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 48846000 | 48848087 | 48846000 | ID=Msa1159270;Name=Msa1159270 |
chr7_4 | mRNA | 48846000 | 48848087 | 48846000 | ID=Msa1159270-mRNA-1;Parent=Msa1159270;Name=Msa1159270-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.33|1|1|1|3|417|358 |
chr7_4 | exon | 48846000 | 48846697 | 48846000 | ID=Msa1159270-mRNA-1:exon:13296;Parent=Msa1159270-mRNA-1 |
chr7_4 | exon | 48846988 | 48847407 | 48846988 | ID=Msa1159270-mRNA-1:exon:13295;Parent=Msa1159270-mRNA-1 |
chr7_4 | exon | 48847712 | 48848087 | 48847712 | ID=Msa1159270-mRNA-1:exon:13294;Parent=Msa1159270-mRNA-1 |
chr7_4 | CDS | 48847712 | 48848087 | 48847712 | ID=Msa1159270-mRNA-1:cds;Parent=Msa1159270-mRNA-1 |
chr7_4 | CDS | 48846988 | 48847407 | 48846988 | ID=Msa1159270-mRNA-1:cds;Parent=Msa1159270-mRNA-1 |
chr7_4 | CDS | 48846417 | 48846697 | 48846417 | ID=Msa1159270-mRNA-1:cds;Parent=Msa1159270-mRNA-1 |
chr7_4 | three_prime_UTR | 48846000 | 48846416 | 48846000 | ID=Msa1159270-mRNA-1:three_prime_utr;Parent=Msa1159270-mRNA-1 |
Gene Sequence |
Protein sequence |