AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1159270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1159270 MtrunA17_Chr7g0254261 96.369 358 11 1 1 358 1 356 0.0 702
Msa1159270 MtrunA17_Chr6g0460671 50.467 321 132 7 34 354 52 345 5.09e-81 251
Msa1159270 MtrunA17_Chr4g0042501 75.714 140 34 0 64 203 78 217 2.31e-75 239
Msa1159270 MtrunA17_Chr5g0417621 42.368 321 131 10 84 356 127 441 1.04e-71 229
Msa1159270 MtrunA17_Chr3g0125801 43.463 283 149 4 86 358 11 292 3.29e-63 203
Msa1159270 MtrunA17_Chr6g0480581 74.107 112 29 0 88 199 1 112 2.98e-61 196
Msa1159270 MtrunA17_Chr6g0460661 56.098 123 54 0 90 212 15 137 3.25e-46 155
Msa1159270 MtrunA17_Chr4g0008551 59.406 101 41 0 91 191 38 138 5.62e-40 144
Msa1159270 MtrunA17_Chr5g0401731 44.138 145 72 2 91 235 15 150 1.55e-37 137
Msa1159270 MtrunA17_Chr4g0053431 55.446 101 45 0 91 191 5 105 7.37e-37 134
Msa1159270 MtrunA17_Chr3g0133601 55.446 101 45 0 91 191 37 137 9.24e-36 130
Msa1159270 MtrunA17_Chr6g0454921 50.495 101 50 0 91 191 15 115 2.82e-34 125
Msa1159270 MtrunA17_Chr1g0157731 45.185 135 69 2 61 191 58 191 5.60e-33 130
Msa1159270 MtrunA17_Chr3g0139671 43.704 135 71 2 61 191 52 185 1.01e-32 129
Msa1159270 MtrunA17_Chr7g0238631 54.455 101 46 0 91 191 113 213 1.53e-32 127
Msa1159270 MtrunA17_Chr5g0437321 52.632 95 45 0 91 185 19 113 1.67e-31 120
Msa1159270 MtrunA17_Chr5g0429661 40.625 160 90 2 86 245 117 271 8.25e-30 117
Msa1159270 MtrunA17_Chr3g0117511 39.873 158 92 2 91 248 183 337 1.67e-28 115
Msa1159270 MtrunA17_Chr7g0228401 31.154 260 147 6 50 283 236 489 5.68e-28 114
Msa1159270 MtrunA17_Chr5g0397841 53.261 92 43 0 94 185 113 204 9.53e-27 110
Msa1159270 MtrunA17_Chr3g0103281 46.078 102 54 1 91 191 14 115 1.04e-26 108
Msa1159270 MtrunA17_Chr4g0058991 31.746 189 118 2 28 216 157 334 1.11e-26 110
Msa1159270 MtrunA17_Chr7g0228531 31.628 215 135 3 91 299 220 428 4.69e-26 108
Msa1159270 MtrunA17_Chr4g0022901 48.039 102 52 1 91 191 15 116 5.67e-26 105
Msa1159270 MtrunA17_Chr3g0099131 44.545 110 60 1 91 199 43 152 1.29e-25 107
Msa1159270 MtrunA17_Chr4g0022911 48.039 102 52 1 91 191 15 116 2.01e-25 103
Msa1159270 MtrunA17_Chr4g0022931 40.278 144 83 3 91 231 15 158 2.23e-25 103
Msa1159270 MtrunA17_Chr2g0323351 47.059 102 51 2 91 190 14 114 4.94e-25 102
Msa1159270 MtrunA17_Chr5g0417821 45.098 102 55 1 91 191 9 110 1.09e-24 102
Msa1159270 MtrunA17_Chr4g0055981 34.194 155 95 3 90 241 56 206 1.36e-24 100
Msa1159270 MtrunA17_Chr1g0203411 42.857 105 59 1 91 194 14 118 1.81e-24 101
Msa1159270 MtrunA17_Chr8g0360111 48.000 100 51 1 91 189 27 126 2.22e-24 100
Msa1159270 MtrunA17_Chr1g0203441 45.631 103 53 2 91 191 15 116 2.58e-24 100
Msa1159270 MtrunA17_Chr3g0115821 43.966 116 57 3 83 191 1 115 3.04e-24 101
Msa1159270 MtrunA17_Chr2g0311221 48.454 97 49 1 91 186 16 112 3.05e-24 101
Msa1159270 MtrunA17_Chr5g0434911 44.118 102 56 1 91 191 23 124 3.96e-24 100
Msa1159270 MtrunA17_Chr8g0354661 40.602 133 76 2 68 199 18 148 4.45e-24 103
Msa1159270 MtrunA17_Chr4g0048511 47.059 102 53 1 91 191 15 116 7.41e-24 100
Msa1159270 MtrunA17_Chr7g0220341 40.496 121 69 1 74 191 10 130 1.06e-23 99.0
Msa1159270 MtrunA17_Chr5g0434841 27.500 280 165 6 91 350 22 283 1.20e-23 99.8
Msa1159270 MtrunA17_Chr3g0080861 42.727 110 62 1 91 199 39 148 1.50e-23 101
Msa1159270 MtrunA17_Chr1g0193801 41.071 112 65 1 85 195 8 119 1.90e-23 100
Msa1159270 MtrunA17_Chr2g0322521 45.238 126 62 3 76 199 20 140 2.05e-23 100
Msa1159270 MtrunA17_Chr7g0274581 45.098 102 55 1 91 191 14 115 2.32e-23 96.3
Msa1159270 MtrunA17_Chr6g0470971 41.748 103 57 2 91 191 16 117 2.56e-23 98.2
Msa1159270 MtrunA17_Chr7g0270891 40.179 112 66 1 85 195 8 119 2.84e-23 99.4
Msa1159270 MtrunA17_Chr5g0434831 43.137 102 57 1 91 191 9 110 3.07e-23 95.5
Msa1159270 MtrunA17_Chr7g0228991 43.137 102 57 1 91 191 31 132 3.59e-23 97.4
Msa1159270 MtrunA17_Chr7g0228481 29.864 221 131 4 91 299 220 428 4.33e-23 99.8
Msa1159270 MtrunA17_Chr2g0281071 45.098 102 55 1 91 191 15 116 6.05e-23 98.2
Msa1159270 MtrunA17_Chr1g0192411 36.765 136 85 1 91 225 14 149 6.62e-23 99.0
Msa1159270 MtrunA17_Chr1g0167691 43.137 102 57 1 91 191 14 115 7.17e-23 96.3
Msa1159270 MtrunA17_Chr2g0309911 43.137 102 57 1 91 191 13 114 7.77e-23 97.4
Msa1159270 MtrunA17_Chr2g0323411 46.078 102 54 1 91 191 14 115 7.87e-23 97.4
Msa1159270 MtrunA17_Chr5g0434931 42.157 102 58 1 91 191 37 138 8.03e-23 96.7
Msa1159270 MtrunA17_Chr1g0193371 40.179 112 64 2 85 194 8 118 1.66e-22 97.4
Msa1159270 MtrunA17_Chr6g0452271 43.137 102 57 1 91 191 14 115 1.67e-22 96.7
Msa1159270 MtrunA17_Chr1g0154031 43.636 110 61 1 91 199 78 187 2.00e-22 97.4
Msa1159270 MtrunA17_Chr4g0022891 37.903 124 69 3 91 212 14 131 2.21e-22 94.4
Msa1159270 MtrunA17_Chr4g0058631 40.566 106 62 1 91 195 14 119 2.56e-22 96.7
Msa1159270 MtrunA17_Chr5g0397231 43.519 108 55 2 83 184 1 108 3.32e-22 95.9
Msa1159270 MtrunA17_Chr8g0342541 41.379 116 60 3 83 191 1 115 3.99e-22 95.9
Msa1159270 MtrunA17_Chr4g0037141 31.351 185 115 4 83 259 1 181 5.36e-22 94.4
Msa1159270 MtrunA17_Chr5g0400821 41.964 112 58 3 91 195 14 125 6.87e-22 94.7
Msa1159270 MtrunA17_Chr2g0330041 44.037 109 53 3 83 184 1 108 7.24e-22 95.9
Msa1159270 MtrunA17_Chr5g0435101 41.748 103 59 1 90 191 12 114 9.82e-22 92.0
Msa1159270 MtrunA17_Chr3g0117091 38.760 129 74 3 91 215 14 141 1.02e-21 94.7
Msa1159270 MtrunA17_Chr5g0395281 43.689 103 55 2 91 191 14 115 1.06e-21 94.0
Msa1159270 MtrunA17_Chr5g0410961 39.130 115 64 2 83 191 1 115 1.32e-21 94.4
Msa1159270 MtrunA17_Chr4g0032401 42.157 102 58 1 91 191 19 120 1.53e-21 94.0
Msa1159270 MtrunA17_Chr2g0327821 34.615 156 90 4 91 244 8 153 1.62e-21 92.0
Msa1159270 MtrunA17_Chr8g0387421 41.509 106 61 1 91 195 14 119 1.65e-21 93.6
Msa1159270 MtrunA17_Chr1g0177901 50.602 83 41 0 102 184 5 87 1.71e-21 91.3
Msa1159270 MtrunA17_Chr1g0209661 40.000 105 62 1 91 194 29 133 1.80e-21 93.6
Msa1159270 MtrunA17_Chr2g0328771 43.689 103 55 2 91 191 22 123 1.80e-21 93.6
Msa1159270 MtrunA17_Chr4g0070611 39.130 115 64 2 83 191 1 115 1.85e-21 93.2
Msa1159270 MtrunA17_Chr4g0030881 40.678 118 59 3 87 195 5 120 1.89e-21 92.4
Msa1159270 MtrunA17_Chr8g0342521 40.517 116 61 3 83 191 1 115 1.95e-21 94.0
Msa1159270 MtrunA17_Chr1g0211161 41.121 107 60 2 91 195 15 120 2.00e-21 91.7
Msa1159270 MtrunA17_Chr1g0180391 37.162 148 80 4 91 230 21 163 2.23e-21 91.7
Msa1159270 MtrunA17_Chr3g0135311 38.525 122 69 3 91 206 14 135 2.41e-21 93.6
Msa1159270 MtrunA17_Chr7g0261281 42.157 102 58 1 91 191 14 115 2.48e-21 92.4
Msa1159270 MtrunA17_Chr4g0070641 39.130 115 64 2 83 191 1 115 2.67e-21 89.7
Msa1159270 MtrunA17_Chr8g0342481 41.880 117 59 4 83 191 1 116 4.25e-21 93.6
Msa1159270 MtrunA17_Chr7g0217221 40.196 102 60 1 91 191 14 115 4.52e-21 91.7
Msa1159270 MtrunA17_Chr7g0271241 42.718 103 56 2 85 185 8 109 5.04e-21 93.2
Msa1159270 MtrunA17_Chr4g0028311 44.231 104 54 3 91 191 14 116 5.50e-21 92.4
Msa1159270 MtrunA17_Chr7g0228231 28.492 179 121 2 91 268 16 188 5.75e-21 89.7
Msa1159270 MtrunA17_Chr7g0228891 42.718 103 56 2 91 191 14 115 6.01e-21 91.3
Msa1159270 MtrunA17_Chr1g0151941 42.718 103 57 2 91 191 14 116 6.54e-21 90.9
Msa1159270 MtrunA17_Chr3g0088461 43.636 110 60 2 83 191 17 125 6.84e-21 92.4
Msa1159270 MtrunA17_Chr8g0385321 38.261 115 65 2 83 191 1 115 8.20e-21 91.7
Msa1159270 MtrunA17_Chr5g0441131 40.566 106 60 3 91 194 11 115 8.25e-21 88.6
Msa1159270 MtrunA17_Chr4g0039971 41.748 103 57 2 91 191 15 116 8.45e-21 92.0
Msa1159270 MtrunA17_Chr1g0152011 35.971 139 80 3 91 220 14 152 1.14e-20 91.7
Msa1159270 MtrunA17_Chr7g0240821 43.000 100 54 2 94 191 6 104 1.44e-20 89.4
Msa1159270 MtrunA17_Chr8g0346561 36.220 127 73 3 76 198 3 125 1.44e-20 90.9
Msa1159270 MtrunA17_Chr4g0054391 45.361 97 51 2 91 185 14 110 1.52e-20 90.5
Msa1159270 MtrunA17_Chr7g0275911 36.134 119 70 2 83 195 1 119 1.58e-20 89.7
Msa1159270 MtrunA17_Chr1g0167661 41.176 102 59 1 91 191 14 115 1.70e-20 89.7
Msa1159270 MtrunA17_Chr4g0022881 41.237 97 54 2 91 185 14 109 1.94e-20 89.0
Msa1159270 MtrunA17_Chr4g0042671 41.026 117 64 2 76 191 3 115 1.97e-20 91.7
Msa1159270 MtrunA17_Chr8g0343831 37.500 112 69 1 87 197 6 117 1.99e-20 89.4
Msa1159270 MtrunA17_Chr1g0186061 41.905 105 58 2 91 193 22 125 2.00e-20 89.4
Msa1159270 MtrunA17_Chr3g0131121 32.370 173 91 6 83 248 1 154 2.62e-20 89.7
Msa1159270 MtrunA17_Chr8g0334881 47.917 96 48 2 91 184 12 107 3.00e-20 90.1
Msa1159270 MtrunA17_Chr6g0453211 41.237 97 56 1 91 186 14 110 3.27e-20 90.1
Msa1159270 MtrunA17_Chr6g0453471 41.026 117 64 2 76 191 3 115 3.56e-20 90.5
Msa1159270 MtrunA17_Chr7g0264641 39.655 116 63 3 83 191 1 116 3.79e-20 89.0
Msa1159270 MtrunA17_Chr2g0327351 44.898 98 52 2 91 186 14 111 3.80e-20 89.7
Msa1159270 MtrunA17_Chr7g0233061 41.379 116 57 3 71 186 169 273 3.92e-20 90.5
Msa1159270 MtrunA17_Chr1g0194301 39.640 111 63 3 91 198 35 144 4.48e-20 89.0
Msa1159270 MtrunA17_Chr4g0044421 40.541 111 59 3 76 184 3 108 5.02e-20 86.7
Msa1159270 MtrunA17_Chr7g0254411 40.541 111 61 2 82 191 9 115 6.46e-20 89.4
Msa1159270 MtrunA17_Chr1g0187761 29.200 250 120 8 91 333 14 213 6.75e-20 88.2
Msa1159270 MtrunA17_Chr5g0440781 42.857 98 54 2 91 186 14 111 7.36e-20 86.3
Msa1159270 MtrunA17_Chr5g0440761 41.905 105 56 3 91 193 14 115 9.24e-20 87.8
Msa1159270 MtrunA17_Chr4g0060721 39.216 102 61 1 91 191 15 116 1.25e-19 88.6
Msa1159270 MtrunA17_Chr5g0441141 42.857 98 54 2 91 186 14 111 1.33e-19 87.4
Msa1159270 MtrunA17_Chr7g0217741 40.678 118 63 3 76 191 3 115 1.51e-19 87.8
Msa1159270 MtrunA17_Chr3g0121241 38.235 102 62 1 91 191 44 145 1.82e-19 87.8
Msa1159270 MtrunA17_Chr3g0092401 39.216 102 61 1 91 191 15 116 1.96e-19 87.8
Msa1159270 MtrunA17_Chr1g0194951 37.288 118 67 3 76 191 3 115 2.55e-19 88.2
Msa1159270 MtrunA17_Chr4g0013361 44.643 112 57 3 84 193 8 116 2.96e-19 87.0
Msa1159270 MtrunA17_Chr7g0238651 39.286 112 65 1 86 194 2 113 3.08e-19 87.8
Msa1159270 MtrunA17_Chr4g0072751 43.878 98 53 2 91 186 14 111 5.74e-19 87.0
Msa1159270 MtrunA17_Chr1g0168661 43.000 100 54 2 87 184 19 117 6.00e-19 85.5
Msa1159270 MtrunA17_Chr4g0068061 35.043 117 71 2 76 191 3 115 4.08e-18 84.3
Msa1159270 MtrunA17_Chr5g0434901 53.226 62 29 0 124 185 9 70 4.35e-18 79.3
Msa1159270 MtrunA17_Chr8g0349261 42.308 104 56 3 91 191 15 117 4.54e-18 83.6
Msa1159270 MtrunA17_Chr4g0068921 42.268 97 55 1 91 186 26 122 5.54e-18 81.3
Msa1159270 MtrunA17_Chr1g0194291 37.273 110 67 2 91 198 23 132 6.23e-18 82.8
Msa1159270 MtrunA17_Chr3g0110351 41.071 112 59 3 82 191 9 115 7.08e-18 83.2
Msa1159270 MtrunA17_Chr7g0247131 51.471 68 33 0 124 191 14 81 7.81e-18 82.4
Msa1159270 MtrunA17_Chr5g0416341 31.944 144 76 2 94 228 29 159 8.49e-18 84.3
Msa1159270 MtrunA17_Chr5g0434571 41.071 112 59 3 82 191 45 151 8.65e-18 83.6
Msa1159270 MtrunA17_Chr2g0293911 39.091 110 65 2 91 198 26 135 1.15e-17 82.8
Msa1159270 MtrunA17_Chr4g0057031 39.806 103 59 2 91 191 14 115 1.19e-17 82.0
Msa1159270 MtrunA17_Chr6g0450101 41.053 95 55 1 91 184 16 110 1.71e-17 80.1
Msa1159270 MtrunA17_Chr8g0362231 36.735 98 62 0 94 191 25 122 2.96e-17 82.8
Msa1159270 MtrunA17_Chr7g0229101 50.794 63 31 0 124 186 8 70 3.63e-16 76.6
Msa1159270 MtrunA17_Chr7g0229131 33.065 124 77 2 120 237 2 125 5.67e-16 75.1
Msa1159270 MtrunA17_Chr3g0099141 43.902 82 45 1 91 171 42 123 7.71e-16 73.9
Msa1159270 MtrunA17_Chr6g0487491 38.393 112 59 3 91 192 14 125 1.06e-15 76.3
Msa1159270 MtrunA17_Chr5g0425591 45.122 82 41 3 91 169 11 91 6.25e-15 69.7
Msa1159270 MtrunA17_Chr3g0093811 46.377 69 35 2 124 191 18 85 2.45e-14 72.4
Msa1159270 MtrunA17_Chr7g0269831 38.739 111 63 2 82 191 9 115 5.21e-14 72.4
Msa1159270 MtrunA17_Chr6g0483051 37.363 91 56 1 94 184 72 161 7.97e-14 72.8
Msa1159270 MtrunA17_Chr2g0323321 41.250 80 44 2 91 168 13 91 1.46e-13 66.6
Msa1159270 MtrunA17_Chr4g0042611 41.333 75 43 1 91 164 14 88 2.85e-13 65.1
Msa1159270 MtrunA17_Chr5g0395221 42.667 75 42 1 91 164 14 88 3.87e-13 64.7
Msa1159270 MtrunA17_Chr8g0342511 44.000 75 39 2 91 163 14 87 7.15e-13 64.3
Msa1159270 MtrunA17_Chr8g0342531 41.558 77 42 2 91 165 14 89 2.23e-12 64.7
Msa1159270 MtrunA17_Chr7g0233151 38.806 67 41 0 141 207 1 67 6.54e-12 63.5
Msa1159270 MtrunA17_Chr7g0274481 40.000 85 50 1 92 176 8 91 6.68e-12 67.0
Msa1159270 MtrunA17_Chr8g0342461 42.308 78 41 3 91 165 14 90 1.15e-11 62.0
Msa1159270 MtrunA17_Chr6g0453751 41.573 89 42 4 91 169 22 110 1.83e-11 61.2
Msa1159270 MtrunA17_Chr5g0421201 50.000 50 25 0 143 192 12 61 3.56e-11 61.6
Msa1159270 MtrunA17_Chr8g0342471 41.026 78 42 3 91 165 14 90 3.88e-11 60.5
Msa1159270 MtrunA17_Chr3g0104501 54.902 51 23 0 91 141 133 183 4.99e-11 61.6
Msa1159270 MtrunA17_Chr3g0104491 48.077 52 27 0 141 192 17 68 6.88e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1159270 AT5G17800.1 44.043 277 106 5 86 355 88 322 1.02e-71 226
Msa1159270 AT1G69560.1 46.468 269 98 8 90 356 106 330 5.02e-70 222
Msa1159270 AT1G69560.2 46.468 269 98 8 90 356 122 346 5.66e-70 223
Msa1159270 AT1G26780.2 56.757 185 69 3 88 261 95 279 1.23e-66 214
Msa1159270 AT1G26780.1 72.441 127 35 0 88 214 95 221 1.86e-66 211
Msa1159270 AT1G17950.1 39.777 269 131 5 88 354 2 241 1.50e-61 198
Msa1159270 AT3G29020.1 70.940 117 34 0 86 202 60 176 3.83e-60 194
Msa1159270 AT3G29020.2 70.940 117 34 0 86 202 62 178 1.41e-59 194
Msa1159270 AT4G33450.1 77.358 106 24 0 89 194 17 122 7.39e-59 191
Msa1159270 AT1G73410.1 79.439 107 22 0 88 194 3 109 2.27e-57 187
Msa1159270 AT1G73410.2 79.439 107 22 0 88 194 3 109 4.56e-57 184
Msa1159270 AT5G39700.1 64.423 104 37 0 92 195 57 160 3.37e-43 148
Msa1159270 AT5G67300.1 45.395 152 73 2 91 232 6 157 1.07e-37 137
Msa1159270 AT4G37260.1 42.500 160 77 3 91 248 13 159 1.60e-37 137
Msa1159270 AT3G55730.1 55.769 104 46 0 91 194 56 159 5.63e-37 137
Msa1159270 AT2G39880.1 53.913 115 51 1 84 198 45 157 6.13e-37 137
Msa1159270 AT2G23290.1 53.465 101 47 0 91 191 13 113 8.65e-35 130
Msa1159270 AT3G50060.1 53.465 101 47 0 91 191 6 106 1.06e-34 129
Msa1159270 AT3G09230.1 54.455 101 46 0 91 191 55 155 1.88e-34 130
Msa1159270 AT3G09370.2 52.475 101 48 0 91 191 135 235 1.22e-31 125
Msa1159270 AT3G09370.1 52.475 101 48 0 91 191 130 230 1.26e-31 125
Msa1159270 AT3G09370.3 52.475 101 48 0 91 191 143 243 1.94e-31 124
Msa1159270 AT5G02320.1 51.485 101 49 0 91 191 127 227 7.76e-31 123
Msa1159270 AT5G02320.2 51.485 101 49 0 91 191 127 227 7.76e-31 123
Msa1159270 AT4G32730.1 42.222 135 73 2 61 191 54 187 8.32e-31 124
Msa1159270 AT4G32730.5 41.912 136 74 2 60 191 53 187 8.44e-31 124
Msa1159270 AT4G32730.4 41.912 136 74 2 60 191 53 187 8.44e-31 124
Msa1159270 AT4G32730.3 41.912 136 74 2 60 191 53 187 8.44e-31 124
Msa1159270 AT4G32730.2 41.912 136 74 2 60 191 53 187 8.44e-31 124
Msa1159270 AT5G02320.3 51.485 101 49 0 91 191 67 167 9.96e-31 122
Msa1159270 AT5G11510.3 40.441 136 76 2 60 191 47 181 2.85e-30 122
Msa1159270 AT5G11510.1 40.441 136 76 2 60 191 47 181 2.85e-30 122
Msa1159270 AT5G11510.4 40.441 136 76 2 60 191 47 181 2.85e-30 122
Msa1159270 AT5G11510.2 40.441 136 76 2 60 191 47 181 3.06e-30 122
Msa1159270 AT5G11510.5 40.441 136 76 2 60 191 47 181 3.16e-30 122
Msa1159270 AT5G40360.1 40.667 150 86 2 46 192 110 259 1.36e-29 117
Msa1159270 AT5G58850.1 50.000 112 56 0 80 191 94 205 2.19e-29 117
Msa1159270 AT5G11050.1 47.368 114 59 1 79 192 94 206 9.03e-29 115
Msa1159270 AT3G27785.1 38.889 162 85 3 91 250 189 338 1.01e-27 113
Msa1159270 AT2G25230.1 49.495 99 48 2 93 190 28 125 2.42e-27 108
Msa1159270 AT4G18770.1 42.857 140 76 1 91 230 217 352 1.97e-26 109
Msa1159270 AT3G11440.2 42.735 117 66 1 84 199 36 152 3.70e-26 109
Msa1159270 AT3G11440.3 42.735 117 66 1 84 199 36 152 4.88e-26 109
Msa1159270 AT3G11440.4 42.735 117 66 1 84 199 36 152 4.88e-26 109
Msa1159270 AT3G11440.1 42.735 117 66 1 84 199 36 152 4.88e-26 109
Msa1159270 AT3G23250.1 35.028 177 104 5 91 261 14 185 9.37e-26 105
Msa1159270 AT2G26950.1 34.524 168 96 4 83 243 10 170 2.53e-25 105
Msa1159270 AT5G40430.1 36.774 155 82 3 46 190 4 152 3.87e-25 102
Msa1159270 AT4G28110.1 43.478 115 59 2 83 191 1 115 4.39e-25 103
Msa1159270 AT2G32460.1 45.045 111 58 2 91 199 20 129 5.33e-25 105
Msa1159270 AT2G32460.2 45.045 111 58 2 91 199 8 117 6.21e-25 105
Msa1159270 AT1G79180.1 46.602 103 52 2 91 191 16 117 6.82e-25 102
Msa1159270 AT5G40330.1 43.137 102 57 1 91 191 14 115 9.90e-25 100
Msa1159270 AT3G12720.1 46.602 103 52 2 91 191 24 125 1.19e-24 102
Msa1159270 AT3G48920.1 48.958 96 48 1 91 185 20 115 1.28e-24 101
Msa1159270 AT4G25560.1 43.363 113 61 2 81 191 2 113 1.38e-24 102
Msa1159270 AT3G27920.1 44.118 102 56 1 91 191 16 117 1.98e-24 100
Msa1159270 AT5G14750.1 43.137 102 57 1 91 191 18 119 2.00e-24 99.4
Msa1159270 AT5G06100.1 43.636 110 61 1 91 199 34 143 2.30e-24 103
Msa1159270 AT5G06100.5 43.636 110 61 1 91 199 34 143 2.52e-24 104
Msa1159270 AT5G06100.2 43.636 110 61 1 91 199 34 143 2.52e-24 104
Msa1159270 AT5G06100.3 43.636 110 61 1 91 199 34 143 2.52e-24 104
Msa1159270 AT5G06100.4 43.636 110 61 1 91 199 34 143 2.52e-24 104
Msa1159270 AT4G26930.1 43.636 110 61 1 91 199 21 130 2.66e-24 103
Msa1159270 AT1G18570.1 45.098 102 55 1 91 191 15 116 2.97e-24 102
Msa1159270 AT5G56110.1 46.078 102 54 1 91 191 14 115 3.06e-24 101
Msa1159270 AT4G05100.1 43.103 116 59 2 83 191 1 116 1.48e-23 99.8
Msa1159270 AT1G63910.1 39.130 138 77 3 83 213 1 138 1.74e-23 100
Msa1159270 AT5G65230.1 45.631 103 53 2 91 191 14 115 1.92e-23 99.4
Msa1159270 AT5G10280.1 38.931 131 75 3 91 217 14 143 2.38e-23 99.4
Msa1159270 AT2G31180.1 44.118 102 56 1 91 191 14 115 2.47e-23 97.8
Msa1159270 AT1G56160.1 44.660 103 54 2 91 191 16 117 2.62e-23 98.6
Msa1159270 AT3G28470.1 49.474 95 47 1 91 184 14 108 3.36e-23 98.6
Msa1159270 AT3G13890.2 34.444 180 110 4 83 254 1 180 3.68e-23 99.4
Msa1159270 AT5G54230.1 43.137 102 57 1 91 191 14 115 5.74e-23 98.2
Msa1159270 AT3G30210.1 37.500 128 79 1 89 215 27 154 8.85e-23 96.7
Msa1159270 AT2G26960.1 43.243 111 62 1 90 199 21 131 1.03e-22 99.0
Msa1159270 AT5G62470.1 41.584 101 59 0 91 191 14 114 1.30e-22 97.8
Msa1159270 AT3G12820.1 44.660 103 54 2 91 191 16 117 1.50e-22 95.1
Msa1159270 AT5G52600.1 44.118 102 56 1 91 191 14 115 1.73e-22 94.4
Msa1159270 AT4G00540.2 46.154 104 53 1 91 191 103 206 2.15e-22 97.8
Msa1159270 AT1G74080.1 40.496 121 66 2 91 210 14 129 2.21e-22 96.7
Msa1159270 AT5G61420.2 43.396 106 59 1 91 195 14 119 2.54e-22 97.1
Msa1159270 AT1G16490.1 44.660 103 54 2 91 191 16 117 2.65e-22 95.5
Msa1159270 AT3G13890.1 33.333 189 109 5 83 254 1 189 3.40e-22 96.7
Msa1159270 AT1G09540.1 37.762 143 85 3 85 224 8 149 3.60e-22 96.7
Msa1159270 AT4G17785.2 42.735 117 58 3 83 191 1 116 3.69e-22 96.3
Msa1159270 AT4G17785.1 42.735 117 58 3 83 191 1 116 3.97e-22 96.3
Msa1159270 AT5G60890.1 41.509 106 61 1 91 195 14 119 4.05e-22 95.5
Msa1159270 AT4G00540.1 46.154 104 53 1 91 191 101 204 4.15e-22 97.4
Msa1159270 AT5G52260.1 48.544 103 50 2 91 191 14 115 4.29e-22 94.7
Msa1159270 AT5G57620.1 44.660 103 55 2 91 191 14 116 6.47e-22 95.5
Msa1159270 AT4G01680.3 39.091 110 66 1 85 193 8 117 6.61e-22 93.6
Msa1159270 AT3G47600.1 42.157 102 58 1 91 191 14 115 8.19e-22 95.1
Msa1159270 AT1G74430.1 42.157 102 58 1 91 191 14 115 8.41e-22 94.0
Msa1159270 AT5G55020.1 41.818 110 63 1 91 199 28 137 8.56e-22 97.1
Msa1159270 AT5G07700.1 45.098 102 55 1 91 191 14 115 9.27e-22 95.1
Msa1159270 AT5G07700.2 45.098 102 55 1 91 191 14 115 9.27e-22 95.1
Msa1159270 AT1G06180.1 35.938 192 108 7 82 266 9 192 1.07e-21 93.2
Msa1159270 AT5G23000.1 44.231 104 54 2 91 191 14 116 1.21e-21 94.7
Msa1159270 AT1G34670.1 40.870 115 62 2 83 191 1 115 1.24e-21 95.1
Msa1159270 AT3G02940.2 39.130 115 64 2 83 191 1 115 1.59e-21 94.0
Msa1159270 AT3G53200.1 42.056 107 59 2 91 195 11 116 1.60e-21 92.4
Msa1159270 AT4G01680.1 39.091 110 66 1 85 193 8 117 1.68e-21 94.4
Msa1159270 AT5G16770.4 39.130 115 64 2 83 191 1 115 1.82e-21 94.0
Msa1159270 AT5G16770.3 39.130 115 64 2 83 191 1 115 1.82e-21 94.0
Msa1159270 AT1G35515.1 36.522 115 67 2 83 191 1 115 1.97e-21 91.7
Msa1159270 AT1G22640.1 39.655 116 62 3 83 191 1 115 2.15e-21 92.4
Msa1159270 AT4G21440.1 43.137 102 57 1 91 191 14 115 2.22e-21 94.4
Msa1159270 AT4G38620.1 38.261 115 65 2 83 191 1 115 2.30e-21 92.8
Msa1159270 AT3G02940.1 39.130 115 64 2 83 191 1 115 2.55e-21 93.6
Msa1159270 AT3G02940.3 39.130 115 64 2 83 191 1 115 2.55e-21 93.6
Msa1159270 AT5G16770.1 39.130 115 64 2 83 191 1 115 2.85e-21 93.6
Msa1159270 AT5G16770.2 39.130 115 64 2 83 191 1 115 2.85e-21 93.6
Msa1159270 AT5G12870.1 41.509 106 61 1 87 191 16 121 3.24e-21 92.4
Msa1159270 AT3G49690.1 44.660 103 55 2 91 191 14 116 4.31e-21 92.8
Msa1159270 AT5G62470.2 41.176 102 59 1 91 191 14 115 4.32e-21 93.6
Msa1159270 AT5G35550.1 40.777 103 60 1 90 191 15 117 4.49e-21 91.7
Msa1159270 AT4G09460.1 31.609 174 103 3 83 240 1 174 4.55e-21 91.3
Msa1159270 AT1G79180.2 37.037 135 51 2 91 191 16 150 4.56e-21 92.8
Msa1159270 AT1G57560.2 32.759 174 112 3 85 254 8 180 5.20e-21 92.0
Msa1159270 AT5G07690.1 43.564 101 56 1 91 190 14 114 5.93e-21 92.8
Msa1159270 AT1G66370.1 37.963 108 66 1 91 197 10 117 8.07e-21 90.9
Msa1159270 AT5G26660.1 33.974 156 96 3 91 240 14 168 8.79e-21 92.4
Msa1159270 AT1G18710.1 40.196 102 60 1 91 191 14 115 9.86e-21 90.9
Msa1159270 AT3G01140.2 39.130 115 64 2 83 191 1 115 1.02e-20 92.4
Msa1159270 AT1G57560.1 39.450 109 63 2 85 191 8 115 1.08e-20 91.7
Msa1159270 AT5G15310.1 39.130 115 64 2 83 191 1 115 1.13e-20 91.7
Msa1159270 AT3G08500.1 43.137 102 57 1 91 191 32 133 1.29e-20 92.0
Msa1159270 AT5G15310.2 39.130 115 64 2 83 191 1 115 1.32e-20 91.3
Msa1159270 AT5G65790.1 34.752 141 86 3 91 225 14 154 1.49e-20 92.0
Msa1159270 AT3G46130.1 41.121 107 60 2 91 195 11 116 1.69e-20 90.1
Msa1159270 AT3G01140.1 41.176 102 59 1 91 191 57 158 1.78e-20 92.0
Msa1159270 AT5G59780.3 40.187 107 61 2 91 195 10 115 1.81e-20 89.4
Msa1159270 AT5G15310.4 39.130 115 64 2 83 191 1 115 1.85e-20 89.7
Msa1159270 AT5G14750.3 48.529 68 35 0 124 191 18 85 2.12e-20 87.4
Msa1159270 AT4G01680.2 37.705 122 63 2 85 193 8 129 2.91e-20 90.9
Msa1159270 AT3G60460.1 45.714 105 55 2 91 193 13 117 3.16e-20 90.1
Msa1159270 AT5G14340.1 40.000 105 60 2 91 193 26 129 4.21e-20 89.4
Msa1159270 AT2G47190.1 40.000 110 64 2 91 198 22 131 4.73e-20 89.0
Msa1159270 AT1G66380.1 37.600 125 77 1 84 207 3 127 6.07e-20 85.5
Msa1159270 AT1G25340.2 38.462 104 60 1 91 194 20 119 6.76e-20 89.0
Msa1159270 AT3G61250.1 41.964 112 58 3 82 191 9 115 8.07e-20 89.0
Msa1159270 AT1G25340.3 38.462 104 60 1 91 194 20 119 8.71e-20 89.0
Msa1159270 AT3G28910.1 40.196 102 60 1 91 191 14 115 9.70e-20 89.0
Msa1159270 AT1G25340.1 38.095 105 64 1 91 194 20 124 9.72e-20 88.6
Msa1159270 AT2G02820.1 34.711 121 79 0 94 214 33 153 1.16e-19 90.1
Msa1159270 AT2G02820.2 34.711 121 79 0 94 214 33 153 1.25e-19 90.5
Msa1159270 AT4G34990.1 37.391 115 66 2 83 191 1 115 1.25e-19 87.8
Msa1159270 AT2G16720.1 37.069 116 65 3 83 191 1 115 1.31e-19 87.8
Msa1159270 AT2G02820.3 34.711 121 79 0 94 214 33 153 1.37e-19 89.0
Msa1159270 AT1G68320.1 39.623 106 61 2 91 194 21 125 2.04e-19 87.4
Msa1159270 AT1G74650.1 38.235 102 62 1 91 191 14 115 2.95e-19 87.8
Msa1159270 AT1G56650.1 35.484 124 79 1 84 206 3 126 3.10e-19 86.3
Msa1159270 AT2G36890.1 43.269 104 55 3 91 191 14 116 4.16e-19 87.0
Msa1159270 AT2G36890.2 43.269 104 55 3 91 191 55 157 4.54e-19 87.4
Msa1159270 AT1G08810.1 34.014 147 94 2 91 234 14 160 4.70e-19 86.7
Msa1159270 AT5G49620.1 36.232 138 82 3 63 198 4 137 5.49e-19 86.7
Msa1159270 AT5G16600.1 40.870 115 61 3 82 194 9 118 5.84e-19 87.0
Msa1159270 AT3G12820.2 51.471 68 33 0 124 191 2 69 1.07e-18 83.6
Msa1159270 AT3G01530.1 30.337 178 110 3 91 266 27 192 1.11e-18 84.0
Msa1159270 AT3G53200.2 48.611 72 37 0 124 195 12 83 1.27e-18 83.6
Msa1159270 AT4G13480.1 40.187 107 61 2 87 191 4 109 1.37e-18 84.7
Msa1159270 AT3G24310.1 44.792 96 50 2 91 184 20 114 1.38e-18 85.1
Msa1159270 AT3G13540.1 30.864 162 102 3 91 242 25 186 1.68e-18 84.3
Msa1159270 AT5G40350.1 29.688 192 113 6 91 266 19 204 2.39e-18 83.2
Msa1159270 AT4G12350.1 32.544 169 100 4 88 243 11 178 2.46e-18 84.7
Msa1159270 AT1G48000.1 43.158 95 53 1 91 184 34 128 2.50e-18 83.6
Msa1159270 AT1G66230.1 32.121 165 103 4 82 242 9 168 2.79e-18 84.3
Msa1159270 AT5G35550.2 46.154 78 40 1 116 191 43 120 3.00e-18 84.0
Msa1159270 AT3G27810.1 41.053 95 55 1 91 184 22 116 6.32e-18 82.0
Msa1159270 AT4G37780.1 38.835 103 61 2 91 191 14 116 8.09e-18 83.2
Msa1159270 AT1G14350.2 34.951 103 67 0 94 196 28 130 8.97e-18 84.7
Msa1159270 AT1G14350.1 34.951 103 67 0 94 196 28 130 8.97e-18 84.7
Msa1159270 AT4G22680.1 40.777 103 58 2 91 191 14 115 1.16e-17 82.4
Msa1159270 AT3G06490.1 39.091 110 65 2 91 198 21 130 2.63e-17 82.0
Msa1159270 AT2G47460.1 38.235 102 62 1 91 191 14 115 3.85e-17 82.0
Msa1159270 AT5G49330.1 37.255 102 63 1 91 191 14 115 4.35e-17 81.6
Msa1159270 AT5G59780.2 45.833 72 39 0 124 195 23 94 4.89e-17 79.3
Msa1159270 AT3G46130.3 43.750 80 43 1 118 195 5 84 8.20e-17 79.0
Msa1159270 AT1G66390.1 40.000 110 65 1 84 192 3 112 8.74e-17 79.3
Msa1159270 AT3G46130.4 45.833 72 39 0 124 195 23 94 1.06e-16 79.0
Msa1159270 AT3G62610.1 35.043 117 71 2 76 191 3 115 1.72e-16 80.1
Msa1159270 AT5G26660.2 34.711 121 75 1 124 240 17 137 1.73e-16 79.7
Msa1159270 AT3G18100.1 38.298 94 58 0 91 184 546 639 3.87e-16 80.5
Msa1159270 AT3G18100.3 38.298 94 58 0 91 184 498 591 4.41e-16 80.1
Msa1159270 AT3G18100.4 38.298 94 58 0 91 184 385 478 5.73e-16 79.7
Msa1159270 AT3G18100.2 38.298 94 58 0 91 184 333 426 7.26e-16 79.3
Msa1159270 AT2G37630.1 32.857 140 84 2 91 220 4 143 7.44e-16 78.6
Msa1159270 AT5G49620.2 32.895 152 82 4 63 198 4 151 1.23e-15 77.4
Msa1159270 AT5G40350.2 29.747 158 90 5 124 266 8 159 1.42e-15 74.3
Msa1159270 AT1G66380.3 42.857 84 48 0 124 207 11 94 2.90e-15 71.6
Msa1159270 AT3G27810.2 47.541 61 32 0 124 184 7 67 3.40e-15 73.2
Msa1159270 AT5G62320.1 38.182 110 58 3 91 191 15 123 4.41e-15 74.3
Msa1159270 AT3G47600.2 45.588 68 37 0 124 191 42 109 8.52e-15 74.7
Msa1159270 AT3G23250.2 32.331 133 80 4 134 261 1 128 9.78e-14 70.5
Msa1159270 AT1G71030.2 41.538 65 38 0 127 191 5 69 1.38e-13 68.9
Msa1159270 AT1G71030.1 41.538 65 38 0 127 191 19 83 1.57e-13 68.9
Msa1159270 AT5G14750.4 41.379 58 34 0 134 191 1 58 6.83e-13 65.9
Msa1159270 AT5G14750.2 41.379 58 34 0 134 191 1 58 6.83e-13 65.9
Msa1159270 AT1G22640.3 43.103 58 33 0 134 191 1 58 9.87e-12 63.9
Msa1159270 AT1G09770.1 40.000 85 50 1 92 176 8 91 1.44e-11 66.2

Find 90 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTACAGTTTGTTCTATAAA+AGG 0.209769 7_4:-48846290 Msa1159270:three_prime_UTR
TTCACCAGAAATTGAGATAT+TGG 0.242932 7_4:+48846495 None:intergenic
CTGAATATGGTCCTCAAAAT+TGG 0.247103 7_4:-48847746 Msa1159270:CDS
AGGTCCAATATCTCAATTTC+TGG 0.252170 7_4:-48846499 Msa1159270:CDS
TTATCTGCTCATAAAATCTA+TGG 0.294082 7_4:-48847299 Msa1159270:CDS
ATTGTATAAACTCCTGGTTT+TGG 0.307076 7_4:-48846130 Msa1159270:three_prime_UTR
AAGGAGCTTGTTGCTGAATA+TGG 0.317262 7_4:-48847759 Msa1159270:CDS
TTGTTATGCTGTGGTACTTT+TGG 0.354798 7_4:-48846071 Msa1159270:three_prime_UTR
TTAAGTTTAGCATCTTCTAT+TGG 0.361231 7_4:+48847780 None:intergenic
CTCTTCTTCCTCCTCAGAAA+AGG 0.362113 7_4:+48847328 None:intergenic
TCAAGGCTATGGATCACTAA+TGG 0.371833 7_4:-48846988 Msa1159270:CDS
AGGAGCTATACAAAGCTAAA+TGG 0.376612 7_4:-48846413 Msa1159270:exon
AAAGCACCCATCTTCTACTT+TGG 0.377594 7_4:+48847914 None:intergenic
ACCATCTCAAGCACCATTGA+TGG 0.379437 7_4:-48847083 Msa1159270:CDS
AATTGAGATATTGGACCTAT+TGG 0.389765 7_4:+48846504 None:intergenic
AGGAGTGAGTGAGAGATTAG+TGG 0.396526 7_4:+48847046 None:intergenic
TCCTTTGACAAACCCTGAAA+AGG 0.411626 7_4:-48847970 Msa1159270:CDS
AGCTTTGTTCTAGAGGTCAT+TGG 0.416349 7_4:-48847806 Msa1159270:CDS
GTTTGTCAAAGGAAGAGCTT+TGG 0.416396 7_4:+48847980 None:intergenic
AATAGAAGATGCTAAACTTA+AGG 0.419512 7_4:-48847778 Msa1159270:CDS
ATAAAATCTATGGTAACAAA+TGG 0.422289 7_4:-48847289 Msa1159270:CDS
AGCTCTGTTTCTGTGAAAGT+TGG 0.422370 7_4:-48847837 Msa1159270:CDS
AACAGTGTACTGTGTATAGA+AGG 0.441649 7_4:-48847181 Msa1159270:CDS
TATTCCTTCAACTCATCTTG+TGG 0.441836 7_4:-48848006 Msa1159270:CDS
CCATCCAAGTCATAAAACTT+TGG 0.446284 7_4:+48846030 None:intergenic
CAAGGCTATGGATCACTAAT+GGG 0.446395 7_4:-48846987 Msa1159270:intron
ACAAGATGAGTTGAAGGAAT+AGG 0.447818 7_4:+48848008 None:intergenic
TTGATTGCAGAACATCTTGA+AGG 0.454431 7_4:-48847720 Msa1159270:CDS
CAAAGCTAAATGGTTGATAC+AGG 0.458360 7_4:-48846403 Msa1159270:exon
AGTTGAGACATTTCCATCAA+TGG 0.463655 7_4:+48847070 None:intergenic
TTCTCATATAGCAGAATACT+AGG 0.469714 7_4:-48846102 Msa1159270:three_prime_UTR
ATAATAATTGTATAAACTCC+TGG 0.469951 7_4:-48846136 Msa1159270:three_prime_UTR
ATAATGCAGTGAAGAATCAT+TGG 0.470220 7_4:-48847232 Msa1159270:CDS
GAGAAAGTGTGGTGGCAACT+AGG 0.473551 7_4:-48846666 Msa1159270:CDS
AGAAAGTGTGGTGGCAACTA+GGG 0.475189 7_4:-48846665 Msa1159270:CDS
GAACATCTTGAAGGAAGATC+AGG 0.475989 7_4:-48847711 Msa1159270:intron
ATACAGGAAGATCATGGGTT+AGG 0.478477 7_4:-48846387 Msa1159270:three_prime_UTR
GATGGGTGCTTTGAGGTTCA+AGG 0.478786 7_4:-48847903 Msa1159270:CDS
TTTAGGTCCAAAGTAGAAGA+TGG 0.479793 7_4:-48847921 Msa1159270:CDS
GAATCCACAAGATGAGTTGA+AGG 0.483859 7_4:+48848002 None:intergenic
GTTGAAGGAATAGGAGCTAA+AGG 0.488826 7_4:+48848017 None:intergenic
CATTACCAAGTTTCAAAGAC+AGG 0.490809 7_4:+48847874 None:intergenic
CCTTTGACAAACCCTGAAAA+GGG 0.491757 7_4:-48847969 Msa1159270:CDS
CTGAGTCAGTTACCACCAAT+AGG 0.493276 7_4:-48846519 Msa1159270:CDS
ACTTTGGACCTAAACATTGA+GGG 0.493361 7_4:+48847930 None:intergenic
TACTCCAAGCTTTGTTCTAG+AGG 0.507196 7_4:-48847813 Msa1159270:CDS
TACTTTGGACCTAAACATTG+AGG 0.508715 7_4:+48847929 None:intergenic
TAAAATCTATGGTAACAAAT+GGG 0.508945 7_4:-48847288 Msa1159270:CDS
GTCGAGAGTCATCAAGGCTA+TGG 0.512571 7_4:-48846999 Msa1159270:CDS
ACTCCAAGAAAATCAATGAA+TGG 0.522689 7_4:+48846436 None:intergenic
TGAGATATTGGACCTATTGG+TGG 0.526375 7_4:+48846507 None:intergenic
GCAAGGGAACCGTTTGTGTT+GGG 0.529275 7_4:-48846345 Msa1159270:three_prime_UTR
AGTAGAAGATGGGTGCTTTG+AGG 0.530721 7_4:-48847910 Msa1159270:CDS
GAATCATTGGCATGTGATCA+TGG 0.539113 7_4:-48847219 Msa1159270:CDS
TGTTGTTGAAAGTCTTTCAA+AGG 0.540837 7_4:-48847147 Msa1159270:CDS
TCTGGTGAAAATGAAAATGT+TGG 0.542696 7_4:-48846481 Msa1159270:CDS
ACAACTAGTTTAGCTGAAGA+AGG 0.544088 7_4:+48847026 None:intergenic
TACTGTGTATAGAAGGAGAA+AGG 0.544161 7_4:-48847174 Msa1159270:CDS
TCTCATATAGCAGAATACTA+GGG 0.547555 7_4:-48846101 Msa1159270:three_prime_UTR
TGCAAGGGAACCGTTTGTGT+TGG 0.549674 7_4:-48846346 Msa1159270:three_prime_UTR
TGGTTGATACAGGAAGATCA+TGG 0.550140 7_4:-48846393 Msa1159270:three_prime_UTR
TGATCATGGCTAGAAGACAT+AGG 0.551949 7_4:-48847205 Msa1159270:CDS
ATGACCTCTAGAACAAAGCT+TGG 0.553743 7_4:+48847809 None:intergenic
TCCATCAATGGTGCTTGAGA+TGG 0.557727 7_4:+48847082 None:intergenic
TAGCCTTGATGACTCTCGAC+TGG 0.560007 7_4:+48847002 None:intergenic
GATCATGGGTTAGGAAAGTG+AGG 0.563056 7_4:-48846378 Msa1159270:three_prime_UTR
ACTGCATTATCTGTCCTCCC+TGG 0.564600 7_4:+48847245 None:intergenic
GATCATGGCTAGAAGACATA+GGG 0.580957 7_4:-48847204 Msa1159270:CDS
GGGCCTTGTTTGTTATGCTG+TGG 0.583138 7_4:-48846080 Msa1159270:three_prime_UTR
AAAGCTAATAGATGTGGTGG+TGG 0.583743 7_4:-48846584 Msa1159270:CDS
GTTCCAGTCGAGAGTCATCA+AGG 0.591505 7_4:-48847005 Msa1159270:CDS
AGCTTGTAAGAAGAATGAAC+AGG 0.595462 7_4:-48846617 Msa1159270:CDS
GCTAAAGCTAATAGATGTGG+TGG 0.598165 7_4:-48846587 Msa1159270:CDS
TATGAAAGTGATGATGACTT+AGG 0.598889 7_4:-48846183 Msa1159270:three_prime_UTR
GTTGAACTTCTGTGAAGTCA+TGG 0.600796 7_4:+48848067 None:intergenic
AAAGCTAAAGCTAATAGATG+TGG 0.612393 7_4:-48846590 Msa1159270:CDS
ATGAGAAACAGTCCAAAACC+AGG 0.613282 7_4:+48846118 None:intergenic
TATAGAACAAACTGTACACA+AGG 0.613504 7_4:+48846295 None:intergenic
GGTTGATACAGGAAGATCAT+GGG 0.615733 7_4:-48846392 Msa1159270:three_prime_UTR
TTAGGTCCAAAGTAGAAGAT+GGG 0.619017 7_4:-48847920 Msa1159270:CDS
GTGAGGGTAGTCAGATGCAA+GGG 0.623599 7_4:-48846361 Msa1159270:three_prime_UTR
AGTGAGGGTAGTCAGATGCA+AGG 0.624309 7_4:-48846362 Msa1159270:three_prime_UTR
ATCATGGGTTAGGAAAGTGA+GGG 0.631123 7_4:-48846377 Msa1159270:three_prime_UTR
CTCATATAGCAGAATACTAG+GGG 0.639695 7_4:-48846100 Msa1159270:three_prime_UTR
AGACAAATCTAGAGAAAGTG+TGG 0.652450 7_4:-48846677 Msa1159270:CDS
GTACCACAGCATAACAAACA+AGG 0.673323 7_4:+48846077 None:intergenic
TTGTAAGAAGAATGAACAGG+TGG 0.680203 7_4:-48846614 Msa1159270:CDS
ACTTCACAGAAGTTCAACAA+TGG 0.689923 7_4:-48848062 Msa1159270:CDS
CAAATCTAGAGAAAGTGTGG+TGG 0.706572 7_4:-48846674 Msa1159270:CDS
ATAGAACAAACTGTACACAA+GGG 0.723372 7_4:+48846296 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTAATATTTATAAATT+GGG - chr7_4:48846596-48846615 Msa1159270:CDS 0.0%
!!! TTTTTTAATATTTATAAATT+GGG - chr7_4:48846596-48846615 Msa1159270:CDS 0.0%
!!! TTAATATTTTCTTAAAAATG+GGG + chr7_4:48846393-48846412 None:intergenic 10.0%
!!! CTTTAATATTTTCTTAAAAA+TGG + chr7_4:48846395-48846414 None:intergenic 10.0%
!!! TTAATATTTTCTTAAAAATG+GGG + chr7_4:48846393-48846412 None:intergenic 10.0%
!!! CTTTAATATTTTCTTAAAAA+TGG + chr7_4:48846395-48846414 None:intergenic 10.0%
!! TATATATTAAAATACATGCA+AGG + chr7_4:48846638-48846657 None:intergenic 15.0%
!! ATATTTAATAATCTCTCATT+AGG - chr7_4:48847107-48847126 Msa1159270:CDS 15.0%
!!! ACTATGTTTTATACTATTAT+AGG + chr7_4:48847133-48847152 None:intergenic 15.0%
!! TGTTATGTAACAATTAAATT+TGG + chr7_4:48847340-48847359 None:intergenic 15.0%
!! AATGAATTGAAGAAAAAAAT+AGG - chr7_4:48847818-48847837 Msa1159270:CDS 15.0%
!! TATATATTAAAATACATGCA+AGG + chr7_4:48846638-48846657 None:intergenic 15.0%
!! ATATTTAATAATCTCTCATT+AGG - chr7_4:48847107-48847126 Msa1159270:CDS 15.0%
!!! ACTATGTTTTATACTATTAT+AGG + chr7_4:48847133-48847152 None:intergenic 15.0%
!! TGTTATGTAACAATTAAATT+TGG + chr7_4:48847340-48847359 None:intergenic 15.0%
!! AATGAATTGAAGAAAAAAAT+AGG - chr7_4:48847818-48847837 Msa1159270:CDS 15.0%
!!! TTGTTTTCAATTTTAATTGC+AGG - chr7_4:48846658-48846677 Msa1159270:CDS 20.0%
!! ATAAAATCTATGGTAACAAA+TGG - chr7_4:48846776-48846795 Msa1159270:intron 20.0%
!! TAAAATCTATGGTAACAAAT+GGG - chr7_4:48846777-48846796 Msa1159270:intron 20.0%
!!! TAAAACATAGTTTTAAGTTG+CGG - chr7_4:48847142-48847161 Msa1159270:CDS 20.0%
!! CACTACAAATATTTATATTG+CGG - chr7_4:48847174-48847193 Msa1159270:CDS 20.0%
!! ATAATAATTGTATAAACTCC+TGG - chr7_4:48847929-48847948 Msa1159270:CDS 20.0%
!!! TTGTTTTCAATTTTAATTGC+AGG - chr7_4:48846658-48846677 Msa1159270:CDS 20.0%
!! ATAAAATCTATGGTAACAAA+TGG - chr7_4:48846776-48846795 Msa1159270:intron 20.0%
!! TAAAATCTATGGTAACAAAT+GGG - chr7_4:48846777-48846796 Msa1159270:intron 20.0%
!!! TAAAACATAGTTTTAAGTTG+CGG - chr7_4:48847142-48847161 Msa1159270:CDS 20.0%
!! CACTACAAATATTTATATTG+CGG - chr7_4:48847174-48847193 Msa1159270:CDS 20.0%
!! ATAATAATTGTATAAACTCC+TGG - chr7_4:48847929-48847948 Msa1159270:CDS 20.0%
! TTAAGTTTAGCATCTTCTAT+TGG + chr7_4:48846288-48846307 None:intergenic 25.0%
! AATAGAAGATGCTAAACTTA+AGG - chr7_4:48846287-48846306 Msa1159270:three_prime_UTR 25.0%
!!! AGGTTTTTTTGTTGATTCTT+GGG + chr7_4:48846720-48846739 None:intergenic 25.0%
!!! AAGGTTTTTTTGTTGATTCT+TGG + chr7_4:48846721-48846740 None:intergenic 25.0%
! TTATCTGCTCATAAAATCTA+TGG - chr7_4:48846766-48846785 Msa1159270:intron 25.0%
! CGCAATATAAATATTTGTAG+TGG + chr7_4:48847176-48847195 None:intergenic 25.0%
! TTTATATTGCGGTAAAATGT+AGG - chr7_4:48847185-48847204 Msa1159270:CDS 25.0%
! GTAACAATTAAATTTGGACA+TGG + chr7_4:48847334-48847353 None:intergenic 25.0%
!!! GTGAATTTTGACAAGTATTT+TGG - chr7_4:48847425-48847444 Msa1159270:intron 25.0%
! AGAGTTTGAATCTGAAAAAT+TGG + chr7_4:48847513-48847532 None:intergenic 25.0%
!! TGTACAGTTTGTTCTATAAA+AGG - chr7_4:48847775-48847794 Msa1159270:CDS 25.0%
! TTAAGTTTAGCATCTTCTAT+TGG + chr7_4:48846288-48846307 None:intergenic 25.0%
! AATAGAAGATGCTAAACTTA+AGG - chr7_4:48846287-48846306 Msa1159270:three_prime_UTR 25.0%
!!! AGGTTTTTTTGTTGATTCTT+GGG + chr7_4:48846720-48846739 None:intergenic 25.0%
!!! AAGGTTTTTTTGTTGATTCT+TGG + chr7_4:48846721-48846740 None:intergenic 25.0%
! TTATCTGCTCATAAAATCTA+TGG - chr7_4:48846766-48846785 Msa1159270:intron 25.0%
! CGCAATATAAATATTTGTAG+TGG + chr7_4:48847176-48847195 None:intergenic 25.0%
! TTTATATTGCGGTAAAATGT+AGG - chr7_4:48847185-48847204 Msa1159270:CDS 25.0%
! GTAACAATTAAATTTGGACA+TGG + chr7_4:48847334-48847353 None:intergenic 25.0%
!!! GTGAATTTTGACAAGTATTT+TGG - chr7_4:48847425-48847444 Msa1159270:intron 25.0%
! AGAGTTTGAATCTGAAAAAT+TGG + chr7_4:48847513-48847532 None:intergenic 25.0%
!! TGTACAGTTTGTTCTATAAA+AGG - chr7_4:48847775-48847794 Msa1159270:CDS 25.0%
!! AAAAACCTGTCTTTGAAACT+TGG - chr7_4:48846186-48846205 Msa1159270:three_prime_UTR 30.0%
! ATTTTCTTAAAAATGGGGTG+AGG + chr7_4:48846388-48846407 None:intergenic 30.0%
! CAACAAAAAAACCTTTTCTG+AGG - chr7_4:48846726-48846745 Msa1159270:intron 30.0%
!! ATAATTGCTAGACTTTTTCC+AGG - chr7_4:48846802-48846821 Msa1159270:intron 30.0%
!! TAATTGCTAGACTTTTTCCA+GGG - chr7_4:48846803-48846822 Msa1159270:intron 30.0%
ATAATGCAGTGAAGAATCAT+TGG - chr7_4:48846833-48846852 Msa1159270:intron 30.0%
TGTTGTTGAAAGTCTTTCAA+AGG - chr7_4:48846918-48846937 Msa1159270:intron 30.0%
AAAGCTAAAGCTAATAGATG+TGG - chr7_4:48847475-48847494 Msa1159270:intron 30.0%
TTGAATCTGAAAAATTGGAC+TGG + chr7_4:48847508-48847527 None:intergenic 30.0%
AATTGAGATATTGGACCTAT+TGG + chr7_4:48847564-48847583 None:intergenic 30.0%
TTCACCAGAAATTGAGATAT+TGG + chr7_4:48847573-48847592 None:intergenic 30.0%
TCTGGTGAAAATGAAAATGT+TGG - chr7_4:48847584-48847603 Msa1159270:intron 30.0%
!!! CTACCATTCATTGATTTTCT+TGG - chr7_4:48847626-48847645 Msa1159270:intron 30.0%
ACTCCAAGAAAATCAATGAA+TGG + chr7_4:48847632-48847651 None:intergenic 30.0%
!!! TTCATTGATTTTCTTGGAGT+AGG - chr7_4:48847632-48847651 Msa1159270:intron 30.0%
ATAGAACAAACTGTACACAA+GGG + chr7_4:48847772-48847791 None:intergenic 30.0%
TATAGAACAAACTGTACACA+AGG + chr7_4:48847773-48847792 None:intergenic 30.0%
! TATGAAAGTGATGATGACTT+AGG - chr7_4:48847882-48847901 Msa1159270:CDS 30.0%
! ATTGTATAAACTCCTGGTTT+TGG - chr7_4:48847935-48847954 Msa1159270:CDS 30.0%
TTCTCATATAGCAGAATACT+AGG - chr7_4:48847963-48847982 Msa1159270:CDS 30.0%
TCTCATATAGCAGAATACTA+GGG - chr7_4:48847964-48847983 Msa1159270:CDS 30.0%
!! AAAAACCTGTCTTTGAAACT+TGG - chr7_4:48846186-48846205 Msa1159270:three_prime_UTR 30.0%
! ATTTTCTTAAAAATGGGGTG+AGG + chr7_4:48846388-48846407 None:intergenic 30.0%
! CAACAAAAAAACCTTTTCTG+AGG - chr7_4:48846726-48846745 Msa1159270:intron 30.0%
!! ATAATTGCTAGACTTTTTCC+AGG - chr7_4:48846802-48846821 Msa1159270:intron 30.0%
!! TAATTGCTAGACTTTTTCCA+GGG - chr7_4:48846803-48846822 Msa1159270:intron 30.0%
ATAATGCAGTGAAGAATCAT+TGG - chr7_4:48846833-48846852 Msa1159270:intron 30.0%
TGTTGTTGAAAGTCTTTCAA+AGG - chr7_4:48846918-48846937 Msa1159270:intron 30.0%
AAAGCTAAAGCTAATAGATG+TGG - chr7_4:48847475-48847494 Msa1159270:intron 30.0%
TTGAATCTGAAAAATTGGAC+TGG + chr7_4:48847508-48847527 None:intergenic 30.0%
AATTGAGATATTGGACCTAT+TGG + chr7_4:48847564-48847583 None:intergenic 30.0%
TTCACCAGAAATTGAGATAT+TGG + chr7_4:48847573-48847592 None:intergenic 30.0%
TCTGGTGAAAATGAAAATGT+TGG - chr7_4:48847584-48847603 Msa1159270:intron 30.0%
!!! CTACCATTCATTGATTTTCT+TGG - chr7_4:48847626-48847645 Msa1159270:intron 30.0%
ACTCCAAGAAAATCAATGAA+TGG + chr7_4:48847632-48847651 None:intergenic 30.0%
!!! TTCATTGATTTTCTTGGAGT+AGG - chr7_4:48847632-48847651 Msa1159270:intron 30.0%
ATAGAACAAACTGTACACAA+GGG + chr7_4:48847772-48847791 None:intergenic 30.0%
TATAGAACAAACTGTACACA+AGG + chr7_4:48847773-48847792 None:intergenic 30.0%
! TATGAAAGTGATGATGACTT+AGG - chr7_4:48847882-48847901 Msa1159270:CDS 30.0%
! ATTGTATAAACTCCTGGTTT+TGG - chr7_4:48847935-48847954 Msa1159270:CDS 30.0%
TTCTCATATAGCAGAATACT+AGG - chr7_4:48847963-48847982 Msa1159270:CDS 30.0%
TCTCATATAGCAGAATACTA+GGG - chr7_4:48847964-48847983 Msa1159270:CDS 30.0%
ACTTCACAGAAGTTCAACAA+TGG - chr7_4:48846003-48846022 Msa1159270:three_prime_UTR 35.0%
! ACAAGATGAGTTGAAGGAAT+AGG + chr7_4:48846060-48846079 None:intergenic 35.0%
TATTCCTTCAACTCATCTTG+TGG - chr7_4:48846059-48846078 Msa1159270:three_prime_UTR 35.0%
! AAATCTGAAGACCCTTTTCA+GGG + chr7_4:48846110-48846129 None:intergenic 35.0%
! AAAATCTGAAGACCCTTTTC+AGG + chr7_4:48846111-48846130 None:intergenic 35.0%
!!! TTTTGAGACCCTCAATGTTT+AGG - chr7_4:48846127-48846146 Msa1159270:three_prime_UTR 35.0%
ACTTTGGACCTAAACATTGA+GGG + chr7_4:48846138-48846157 None:intergenic 35.0%
TACTTTGGACCTAAACATTG+AGG + chr7_4:48846139-48846158 None:intergenic 35.0%
TTTAGGTCCAAAGTAGAAGA+TGG - chr7_4:48846144-48846163 Msa1159270:three_prime_UTR 35.0%
TTAGGTCCAAAGTAGAAGAT+GGG - chr7_4:48846145-48846164 Msa1159270:three_prime_UTR 35.0%
CATTACCAAGTTTCAAAGAC+AGG + chr7_4:48846194-48846213 None:intergenic 35.0%
CTGAATATGGTCCTCAAAAT+TGG - chr7_4:48846319-48846338 Msa1159270:three_prime_UTR 35.0%
! GCAATCAAGTTCCAATTTTG+AGG + chr7_4:48846333-48846352 None:intergenic 35.0%
TTGATTGCAGAACATCTTGA+AGG - chr7_4:48846345-48846364 Msa1159270:three_prime_UTR 35.0%
!! TTCTAGAGTAAGTGCATGTT+TGG - chr7_4:48846431-48846450 Msa1159270:CDS 35.0%
GTAAGTGCATGTTTGGATTT+AGG - chr7_4:48846438-48846457 Msa1159270:CDS 35.0%
CAGGAAAAAGTTGTAGATTG+AGG - chr7_4:48846677-48846696 Msa1159270:CDS 35.0%
GAAAAAGTTGTAGATTGAGG+TGG - chr7_4:48846680-48846699 Msa1159270:intron 35.0%
!! CAAAAAAACCTTTTCTGAGG+AGG - chr7_4:48846729-48846748 Msa1159270:intron 35.0%
AACAGTGTACTGTGTATAGA+AGG - chr7_4:48846884-48846903 Msa1159270:intron 35.0%
TACTGTGTATAGAAGGAGAA+AGG - chr7_4:48846891-48846910 Msa1159270:intron 35.0%
AGTTGAGACATTTCCATCAA+TGG + chr7_4:48846998-48847017 None:intergenic 35.0%
! ACAACTAGTTTAGCTGAAGA+AGG + chr7_4:48847042-48847061 None:intergenic 35.0%
! AATTGTAAATGCGAAGGCAT+CGG + chr7_4:48847219-48847238 None:intergenic 35.0%
CATCACAATTGTAAATGCGA+AGG + chr7_4:48847225-48847244 None:intergenic 35.0%
AGACAAATCTAGAGAAAGTG+TGG - chr7_4:48847388-48847407 Msa1159270:CDS 35.0%
AGCTTGTAAGAAGAATGAAC+AGG - chr7_4:48847448-48847467 Msa1159270:intron 35.0%
TTGTAAGAAGAATGAACAGG+TGG - chr7_4:48847451-48847470 Msa1159270:intron 35.0%
AGGTCCAATATCTCAATTTC+TGG - chr7_4:48847566-48847585 Msa1159270:intron 35.0%
AGGAGCTATACAAAGCTAAA+TGG - chr7_4:48847652-48847671 Msa1159270:intron 35.0%
! CAAAGCTAAATGGTTGATAC+AGG - chr7_4:48847662-48847681 Msa1159270:intron 35.0%
! TCATTTTCACCCAACACAAA+CGG + chr7_4:48847732-48847751 None:intergenic 35.0%
CTCATATAGCAGAATACTAG+GGG - chr7_4:48847965-48847984 Msa1159270:CDS 35.0%
! TTGTTATGCTGTGGTACTTT+TGG - chr7_4:48847994-48848013 Msa1159270:CDS 35.0%
!! GAAGCCAAAGTTTTATGACT+TGG - chr7_4:48848031-48848050 Msa1159270:CDS 35.0%
CCATCCAAGTCATAAAACTT+TGG + chr7_4:48848038-48848057 None:intergenic 35.0%
!! CCAAAGTTTTATGACTTGGA+TGG - chr7_4:48848035-48848054 Msa1159270:CDS 35.0%
!! AGTTTTATGACTTGGATGGA+TGG - chr7_4:48848039-48848058 Msa1159270:CDS 35.0%
ACTTCACAGAAGTTCAACAA+TGG - chr7_4:48846003-48846022 Msa1159270:three_prime_UTR 35.0%
! ACAAGATGAGTTGAAGGAAT+AGG + chr7_4:48846060-48846079 None:intergenic 35.0%
TATTCCTTCAACTCATCTTG+TGG - chr7_4:48846059-48846078 Msa1159270:three_prime_UTR 35.0%
! AAATCTGAAGACCCTTTTCA+GGG + chr7_4:48846110-48846129 None:intergenic 35.0%
! AAAATCTGAAGACCCTTTTC+AGG + chr7_4:48846111-48846130 None:intergenic 35.0%
!!! TTTTGAGACCCTCAATGTTT+AGG - chr7_4:48846127-48846146 Msa1159270:three_prime_UTR 35.0%
ACTTTGGACCTAAACATTGA+GGG + chr7_4:48846138-48846157 None:intergenic 35.0%
TACTTTGGACCTAAACATTG+AGG + chr7_4:48846139-48846158 None:intergenic 35.0%
TTTAGGTCCAAAGTAGAAGA+TGG - chr7_4:48846144-48846163 Msa1159270:three_prime_UTR 35.0%
TTAGGTCCAAAGTAGAAGAT+GGG - chr7_4:48846145-48846164 Msa1159270:three_prime_UTR 35.0%
CATTACCAAGTTTCAAAGAC+AGG + chr7_4:48846194-48846213 None:intergenic 35.0%
CTGAATATGGTCCTCAAAAT+TGG - chr7_4:48846319-48846338 Msa1159270:three_prime_UTR 35.0%
! GCAATCAAGTTCCAATTTTG+AGG + chr7_4:48846333-48846352 None:intergenic 35.0%
TTGATTGCAGAACATCTTGA+AGG - chr7_4:48846345-48846364 Msa1159270:three_prime_UTR 35.0%
!! TTCTAGAGTAAGTGCATGTT+TGG - chr7_4:48846431-48846450 Msa1159270:CDS 35.0%
GTAAGTGCATGTTTGGATTT+AGG - chr7_4:48846438-48846457 Msa1159270:CDS 35.0%
CAGGAAAAAGTTGTAGATTG+AGG - chr7_4:48846677-48846696 Msa1159270:CDS 35.0%
GAAAAAGTTGTAGATTGAGG+TGG - chr7_4:48846680-48846699 Msa1159270:intron 35.0%
!! CAAAAAAACCTTTTCTGAGG+AGG - chr7_4:48846729-48846748 Msa1159270:intron 35.0%
AACAGTGTACTGTGTATAGA+AGG - chr7_4:48846884-48846903 Msa1159270:intron 35.0%
TACTGTGTATAGAAGGAGAA+AGG - chr7_4:48846891-48846910 Msa1159270:intron 35.0%
AGTTGAGACATTTCCATCAA+TGG + chr7_4:48846998-48847017 None:intergenic 35.0%
! ACAACTAGTTTAGCTGAAGA+AGG + chr7_4:48847042-48847061 None:intergenic 35.0%
! AATTGTAAATGCGAAGGCAT+CGG + chr7_4:48847219-48847238 None:intergenic 35.0%
CATCACAATTGTAAATGCGA+AGG + chr7_4:48847225-48847244 None:intergenic 35.0%
AGACAAATCTAGAGAAAGTG+TGG - chr7_4:48847388-48847407 Msa1159270:CDS 35.0%
AGCTTGTAAGAAGAATGAAC+AGG - chr7_4:48847448-48847467 Msa1159270:intron 35.0%
TTGTAAGAAGAATGAACAGG+TGG - chr7_4:48847451-48847470 Msa1159270:intron 35.0%
AGGTCCAATATCTCAATTTC+TGG - chr7_4:48847566-48847585 Msa1159270:intron 35.0%
AGGAGCTATACAAAGCTAAA+TGG - chr7_4:48847652-48847671 Msa1159270:intron 35.0%
! CAAAGCTAAATGGTTGATAC+AGG - chr7_4:48847662-48847681 Msa1159270:intron 35.0%
! TCATTTTCACCCAACACAAA+CGG + chr7_4:48847732-48847751 None:intergenic 35.0%
CTCATATAGCAGAATACTAG+GGG - chr7_4:48847965-48847984 Msa1159270:CDS 35.0%
! TTGTTATGCTGTGGTACTTT+TGG - chr7_4:48847994-48848013 Msa1159270:CDS 35.0%
!! GAAGCCAAAGTTTTATGACT+TGG - chr7_4:48848031-48848050 Msa1159270:CDS 35.0%
CCATCCAAGTCATAAAACTT+TGG + chr7_4:48848038-48848057 None:intergenic 35.0%
!! CCAAAGTTTTATGACTTGGA+TGG - chr7_4:48848035-48848054 Msa1159270:CDS 35.0%
!! AGTTTTATGACTTGGATGGA+TGG - chr7_4:48848039-48848058 Msa1159270:CDS 35.0%
GTTGAAGGAATAGGAGCTAA+AGG + chr7_4:48846051-48846070 None:intergenic 40.0%
! GAATCCACAAGATGAGTTGA+AGG + chr7_4:48846066-48846085 None:intergenic 40.0%
GTTTGTCAAAGGAAGAGCTT+TGG + chr7_4:48846088-48846107 None:intergenic 40.0%
TCCTTTGACAAACCCTGAAA+AGG - chr7_4:48846095-48846114 Msa1159270:three_prime_UTR 40.0%
CCTTTGACAAACCCTGAAAA+GGG - chr7_4:48846096-48846115 Msa1159270:three_prime_UTR 40.0%
! AAAGCACCCATCTTCTACTT+TGG + chr7_4:48846154-48846173 None:intergenic 40.0%
!! AGCTCTGTTTCTGTGAAAGT+TGG - chr7_4:48846228-48846247 Msa1159270:three_prime_UTR 40.0%
!! TACTCCAAGCTTTGTTCTAG+AGG - chr7_4:48846252-48846271 Msa1159270:three_prime_UTR 40.0%
!! ATGACCTCTAGAACAAAGCT+TGG + chr7_4:48846259-48846278 None:intergenic 40.0%
!! AGCTTTGTTCTAGAGGTCAT+TGG - chr7_4:48846259-48846278 Msa1159270:three_prime_UTR 40.0%
!! AAGGAGCTTGTTGCTGAATA+TGG - chr7_4:48846306-48846325 Msa1159270:three_prime_UTR 40.0%
GAACATCTTGAAGGAAGATC+AGG - chr7_4:48846354-48846373 Msa1159270:three_prime_UTR 40.0%
TCATCACTTTGTGACACAAC+AGG + chr7_4:48846480-48846499 None:intergenic 40.0%
GAATCATTGGCATGTGATCA+TGG - chr7_4:48846846-48846865 Msa1159270:intron 40.0%
TGATCATGGCTAGAAGACAT+AGG - chr7_4:48846860-48846879 Msa1159270:intron 40.0%
GATCATGGCTAGAAGACATA+GGG - chr7_4:48846861-48846880 Msa1159270:intron 40.0%
TCAAGGCTATGGATCACTAA+TGG - chr7_4:48847077-48847096 Msa1159270:CDS 40.0%
CAAGGCTATGGATCACTAAT+GGG - chr7_4:48847078-48847097 Msa1159270:CDS 40.0%
TGCGGTAAAATGTAGGCAAA+TGG - chr7_4:48847192-48847211 Msa1159270:CDS 40.0%
GCGGTAAAATGTAGGCAAAT+GGG - chr7_4:48847193-48847212 Msa1159270:CDS 40.0%
! GTATGTTTAGAATCACGACG+AGG - chr7_4:48847265-48847284 Msa1159270:CDS 40.0%
! CAAATCTAGAGAAAGTGTGG+TGG - chr7_4:48847391-48847410 Msa1159270:intron 40.0%
GCTAAAGCTAATAGATGTGG+TGG - chr7_4:48847478-48847497 Msa1159270:intron 40.0%
AAAGCTAATAGATGTGGTGG+TGG - chr7_4:48847481-48847500 Msa1159270:intron 40.0%
TGAGATATTGGACCTATTGG+TGG + chr7_4:48847561-48847580 None:intergenic 40.0%
! TGGTTGATACAGGAAGATCA+TGG - chr7_4:48847672-48847691 Msa1159270:intron 40.0%
! GGTTGATACAGGAAGATCAT+GGG - chr7_4:48847673-48847692 Msa1159270:intron 40.0%
ATACAGGAAGATCATGGGTT+AGG - chr7_4:48847678-48847697 Msa1159270:intron 40.0%
!! ATCATGGGTTAGGAAAGTGA+GGG - chr7_4:48847688-48847707 Msa1159270:intron 40.0%
ATGAGAAACAGTCCAAAACC+AGG + chr7_4:48847950-48847969 None:intergenic 40.0%
GTACCACAGCATAACAAACA+AGG + chr7_4:48847991-48848010 None:intergenic 40.0%
GTTGAAGGAATAGGAGCTAA+AGG + chr7_4:48846051-48846070 None:intergenic 40.0%
! GAATCCACAAGATGAGTTGA+AGG + chr7_4:48846066-48846085 None:intergenic 40.0%
GTTTGTCAAAGGAAGAGCTT+TGG + chr7_4:48846088-48846107 None:intergenic 40.0%
TCCTTTGACAAACCCTGAAA+AGG - chr7_4:48846095-48846114 Msa1159270:three_prime_UTR 40.0%
CCTTTGACAAACCCTGAAAA+GGG - chr7_4:48846096-48846115 Msa1159270:three_prime_UTR 40.0%
! AAAGCACCCATCTTCTACTT+TGG + chr7_4:48846154-48846173 None:intergenic 40.0%
!! AGCTCTGTTTCTGTGAAAGT+TGG - chr7_4:48846228-48846247 Msa1159270:three_prime_UTR 40.0%
!! TACTCCAAGCTTTGTTCTAG+AGG - chr7_4:48846252-48846271 Msa1159270:three_prime_UTR 40.0%
!! ATGACCTCTAGAACAAAGCT+TGG + chr7_4:48846259-48846278 None:intergenic 40.0%
!! AGCTTTGTTCTAGAGGTCAT+TGG - chr7_4:48846259-48846278 Msa1159270:three_prime_UTR 40.0%
!! AAGGAGCTTGTTGCTGAATA+TGG - chr7_4:48846306-48846325 Msa1159270:three_prime_UTR 40.0%
GAACATCTTGAAGGAAGATC+AGG - chr7_4:48846354-48846373 Msa1159270:three_prime_UTR 40.0%
TCATCACTTTGTGACACAAC+AGG + chr7_4:48846480-48846499 None:intergenic 40.0%
GAATCATTGGCATGTGATCA+TGG - chr7_4:48846846-48846865 Msa1159270:intron 40.0%
TGATCATGGCTAGAAGACAT+AGG - chr7_4:48846860-48846879 Msa1159270:intron 40.0%
GATCATGGCTAGAAGACATA+GGG - chr7_4:48846861-48846880 Msa1159270:intron 40.0%
TCAAGGCTATGGATCACTAA+TGG - chr7_4:48847077-48847096 Msa1159270:CDS 40.0%
CAAGGCTATGGATCACTAAT+GGG - chr7_4:48847078-48847097 Msa1159270:CDS 40.0%
TGCGGTAAAATGTAGGCAAA+TGG - chr7_4:48847192-48847211 Msa1159270:CDS 40.0%
GCGGTAAAATGTAGGCAAAT+GGG - chr7_4:48847193-48847212 Msa1159270:CDS 40.0%
! GTATGTTTAGAATCACGACG+AGG - chr7_4:48847265-48847284 Msa1159270:CDS 40.0%
! CAAATCTAGAGAAAGTGTGG+TGG - chr7_4:48847391-48847410 Msa1159270:intron 40.0%
GCTAAAGCTAATAGATGTGG+TGG - chr7_4:48847478-48847497 Msa1159270:intron 40.0%
AAAGCTAATAGATGTGGTGG+TGG - chr7_4:48847481-48847500 Msa1159270:intron 40.0%
TGAGATATTGGACCTATTGG+TGG + chr7_4:48847561-48847580 None:intergenic 40.0%
! TGGTTGATACAGGAAGATCA+TGG - chr7_4:48847672-48847691 Msa1159270:intron 40.0%
! GGTTGATACAGGAAGATCAT+GGG - chr7_4:48847673-48847692 Msa1159270:intron 40.0%
ATACAGGAAGATCATGGGTT+AGG - chr7_4:48847678-48847697 Msa1159270:intron 40.0%
!! ATCATGGGTTAGGAAAGTGA+GGG - chr7_4:48847688-48847707 Msa1159270:intron 40.0%
ATGAGAAACAGTCCAAAACC+AGG + chr7_4:48847950-48847969 None:intergenic 40.0%
GTACCACAGCATAACAAACA+AGG + chr7_4:48847991-48848010 None:intergenic 40.0%
!! CCCTTTTCAGGGTTTGTCAA+AGG + chr7_4:48846099-48846118 None:intergenic 45.0%
AGTAGAAGATGGGTGCTTTG+AGG - chr7_4:48846155-48846174 Msa1159270:three_prime_UTR 45.0%
CTCTTCTTCCTCCTCAGAAA+AGG + chr7_4:48846740-48846759 None:intergenic 45.0%
!! TTGCTAGACTTTTTCCAGGG+AGG - chr7_4:48846806-48846825 Msa1159270:intron 45.0%
ACCATCTCAAGCACCATTGA+TGG - chr7_4:48846982-48847001 Msa1159270:intron 45.0%
TCCATCAATGGTGCTTGAGA+TGG + chr7_4:48846986-48847005 None:intergenic 45.0%
AGGAGTGAGTGAGAGATTAG+TGG + chr7_4:48847022-48847041 None:intergenic 45.0%
! AGAAAGTGTGGTGGCAACTA+GGG - chr7_4:48847400-48847419 Msa1159270:intron 45.0%
CTGAGTCAGTTACCACCAAT+AGG - chr7_4:48847546-48847565 Msa1159270:intron 45.0%
!! GATCATGGGTTAGGAAAGTG+AGG - chr7_4:48847687-48847706 Msa1159270:intron 45.0%
!! CCCTTTTCAGGGTTTGTCAA+AGG + chr7_4:48846099-48846118 None:intergenic 45.0%
AGTAGAAGATGGGTGCTTTG+AGG - chr7_4:48846155-48846174 Msa1159270:three_prime_UTR 45.0%
CTCTTCTTCCTCCTCAGAAA+AGG + chr7_4:48846740-48846759 None:intergenic 45.0%
!! TTGCTAGACTTTTTCCAGGG+AGG - chr7_4:48846806-48846825 Msa1159270:intron 45.0%
ACCATCTCAAGCACCATTGA+TGG - chr7_4:48846982-48847001 Msa1159270:intron 45.0%
TCCATCAATGGTGCTTGAGA+TGG + chr7_4:48846986-48847005 None:intergenic 45.0%
AGGAGTGAGTGAGAGATTAG+TGG + chr7_4:48847022-48847041 None:intergenic 45.0%
! AGAAAGTGTGGTGGCAACTA+GGG - chr7_4:48847400-48847419 Msa1159270:intron 45.0%
CTGAGTCAGTTACCACCAAT+AGG - chr7_4:48847546-48847565 Msa1159270:intron 45.0%
!! GATCATGGGTTAGGAAAGTG+AGG - chr7_4:48847687-48847706 Msa1159270:intron 45.0%
!!! TTTAATATTTTCTTAAAAAT+GGG + chr7_4:48846394-48846413 None:intergenic 5.0%
!!! CTTTTTTAATATTTATAAAT+TGG - chr7_4:48846595-48846614 Msa1159270:CDS 5.0%
!!! TTTTTAATATTTATAAATTG+GGG - chr7_4:48846597-48846616 Msa1159270:CDS 5.0%
!!! TTTAATATTTTCTTAAAAAT+GGG + chr7_4:48846394-48846413 None:intergenic 5.0%
!!! CTTTTTTAATATTTATAAAT+TGG - chr7_4:48846595-48846614 Msa1159270:CDS 5.0%
!!! TTTTTAATATTTATAAATTG+GGG - chr7_4:48846597-48846616 Msa1159270:CDS 5.0%
!! GATGGGTGCTTTGAGGTTCA+AGG - chr7_4:48846162-48846181 Msa1159270:three_prime_UTR 50.0%
ACTGCATTATCTGTCCTCCC+TGG + chr7_4:48846823-48846842 None:intergenic 50.0%
GTTCCAGTCGAGAGTCATCA+AGG - chr7_4:48847060-48847079 Msa1159270:CDS 50.0%
! TAGCCTTGATGACTCTCGAC+TGG + chr7_4:48847066-48847085 None:intergenic 50.0%
GTCGAGAGTCATCAAGGCTA+TGG - chr7_4:48847066-48847085 Msa1159270:CDS 50.0%
AGAATCACGACGAGGTTCAC+AGG - chr7_4:48847273-48847292 Msa1159270:CDS 50.0%
! GAGAAAGTGTGGTGGCAACT+AGG - chr7_4:48847399-48847418 Msa1159270:intron 50.0%
AGTGAGGGTAGTCAGATGCA+AGG - chr7_4:48847703-48847722 Msa1159270:intron 50.0%
GTGAGGGTAGTCAGATGCAA+GGG - chr7_4:48847704-48847723 Msa1159270:intron 50.0%
TGCAAGGGAACCGTTTGTGT+TGG - chr7_4:48847719-48847738 Msa1159270:CDS 50.0%
GCAAGGGAACCGTTTGTGTT+GGG - chr7_4:48847720-48847739 Msa1159270:CDS 50.0%
!! GGGCCTTGTTTGTTATGCTG+TGG - chr7_4:48847985-48848004 Msa1159270:CDS 50.0%
!! GATGGGTGCTTTGAGGTTCA+AGG - chr7_4:48846162-48846181 Msa1159270:three_prime_UTR 50.0%
ACTGCATTATCTGTCCTCCC+TGG + chr7_4:48846823-48846842 None:intergenic 50.0%
GTTCCAGTCGAGAGTCATCA+AGG - chr7_4:48847060-48847079 Msa1159270:CDS 50.0%
! TAGCCTTGATGACTCTCGAC+TGG + chr7_4:48847066-48847085 None:intergenic 50.0%
GTCGAGAGTCATCAAGGCTA+TGG - chr7_4:48847066-48847085 Msa1159270:CDS 50.0%
AGAATCACGACGAGGTTCAC+AGG - chr7_4:48847273-48847292 Msa1159270:CDS 50.0%
! GAGAAAGTGTGGTGGCAACT+AGG - chr7_4:48847399-48847418 Msa1159270:intron 50.0%
AGTGAGGGTAGTCAGATGCA+AGG - chr7_4:48847703-48847722 Msa1159270:intron 50.0%
GTGAGGGTAGTCAGATGCAA+GGG - chr7_4:48847704-48847723 Msa1159270:intron 50.0%
TGCAAGGGAACCGTTTGTGT+TGG - chr7_4:48847719-48847738 Msa1159270:CDS 50.0%
GCAAGGGAACCGTTTGTGTT+GGG - chr7_4:48847720-48847739 Msa1159270:CDS 50.0%
!! GGGCCTTGTTTGTTATGCTG+TGG - chr7_4:48847985-48848004 Msa1159270:CDS 50.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 48846000 48848087 48846000 ID=Msa1159270;Name=Msa1159270
chr7_4 mRNA 48846000 48848087 48846000 ID=Msa1159270-mRNA-1;Parent=Msa1159270;Name=Msa1159270-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.33|1|1|1|3|417|358
chr7_4 exon 48846000 48846697 48846000 ID=Msa1159270-mRNA-1:exon:13296;Parent=Msa1159270-mRNA-1
chr7_4 exon 48846988 48847407 48846988 ID=Msa1159270-mRNA-1:exon:13295;Parent=Msa1159270-mRNA-1
chr7_4 exon 48847712 48848087 48847712 ID=Msa1159270-mRNA-1:exon:13294;Parent=Msa1159270-mRNA-1
chr7_4 CDS 48847712 48848087 48847712 ID=Msa1159270-mRNA-1:cds;Parent=Msa1159270-mRNA-1
chr7_4 CDS 48846988 48847407 48846988 ID=Msa1159270-mRNA-1:cds;Parent=Msa1159270-mRNA-1
chr7_4 CDS 48846417 48846697 48846417 ID=Msa1159270-mRNA-1:cds;Parent=Msa1159270-mRNA-1
chr7_4 three_prime_UTR 48846000 48846416 48846000 ID=Msa1159270-mRNA-1:three_prime_utr;Parent=Msa1159270-mRNA-1
Gene Sequence

>Msa1159270

ATGACTTCACAGAAGTTCAACAATGGTGATATCAATATGAGTCATTTTCCTTTAGCTCCTATTCCTTCAACTCATCTTGTGGATTCCAAAGCTCTTCCTTTGACAAACCCTGAAAAGGGTCTTCAGATTTTGAGACCCTCAATGTTTAGGTCCAAAGTAGAAGATGGGTGCTTTGAGGTTCAAGGAAAAAACCTGTCTTTGAAACTTGGTAATGAAGTAGAAGATAAAAGCTCTGTTTCTGTGAAAGTTGGATACTCCAAGCTTTGTTCTAGAGGTCATTGGAGACCAATAGAAGATGCTAAACTTAAGGAGCTTGTTGCTGAATATGGTCCTCAAAATTGGAACTTGATTGCAGAACATCTTGAAGGAAGATCAGGAAAAAGTTGTAGATTGAGGTGGTTCAATCAGCTAGACCCAAGAATCAACAAAAAAACCTTTTCTGAGGAGGAAGAAGAGAGACTTTTATCTGCTCATAAAATCTATGGTAACAAATGGGCTATAATTGCTAGACTTTTTCCAGGGAGGACAGATAATGCAGTGAAGAATCATTGGCATGTGATCATGGCTAGAAGACATAGGGAACAGTGTACTGTGTATAGAAGGAGAAAGGCTGTTGTTGTTGAAAGTCTTTCAAAGGATTTAAAATTAAGTCTTTCAAACAATGCAGCTAGTGATTCAACCATCTCAAGCACCATTGATGGAAATGTCTCAACTTCCACTAATCTCTCACTCACTCCTTCTTCAGCTAAACTAGTTGTTCCAGTCGAGAGTCATCAAGGCTATGGATCACTAATGGACAAATCTAGAGAAAGTGTGGTGGCAACTAGGGATGTGAATTTTGACAAGTATTTTGGAGCTTGTAAGAAGAATGAACAGGTGGAAAAGCTAAAGCTAATAGATGTGGTGGTGGACCAGTCCAATTTTTCAGATTCAAACTCTGAAGTATCAGTATCTGAGTCAGTTACCACCAATAGGTCCAATATCTCAATTTCTGGTGAAAATGAAAATGTTGGTGTTAAGATTAACATGTTACTACCATTCATTGATTTTCTTGGAGTAGGAGCTATACAAAGCTAA

Protein sequence

>Msa1159270

MTSQKFNNGDINMSHFPLAPIPSTHLVDSKALPLTNPEKGLQILRPSMFRSKVEDGCFEVQGKNLSLKLGNEVEDKSSVSVKVGYSKLCSRGHWRPIEDAKLKELVAEYGPQNWNLIAEHLEGRSGKSCRLRWFNQLDPRINKKTFSEEEEERLLSAHKIYGNKWAIIARLFPGRTDNAVKNHWHVIMARRHREQCTVYRRRKAVVVESLSKDLKLSLSNNAASDSTISSTIDGNVSTSTNLSLTPSSAKLVVPVESHQGYGSLMDKSRESVVATRDVNFDKYFGACKKNEQVEKLKLIDVVVDQSNFSDSNSEVSVSESVTTNRSNISISGENENVGVKINMLLPFIDFLGVGAIQS*