AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1396200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1396200 MtrunA17_Chr3g0091571 97.917 480 10 0 1 480 1 480 0.0 968
Msa1396200 MtrunA17_Chr7g0228421 46.053 76 39 2 186 260 154 228 2.27e-16 80.9
Msa1396200 MtrunA17_Chr3g0142061 31.461 178 111 3 288 465 95 261 6.13e-16 78.2
Msa1396200 MtrunA17_Chr8g0377881 39.189 74 43 2 188 260 22 94 1.97e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1396200 AT1G18660.1 64.619 472 163 4 11 480 17 486 0.0 644
Msa1396200 AT1G18660.2 64.619 472 163 4 11 480 17 486 0.0 644
Msa1396200 AT1G18660.3 64.619 472 163 4 11 480 17 486 0.0 644
Msa1396200 AT1G18660.4 63.696 460 163 4 11 468 17 474 0.0 616
Msa1396200 AT1G75460.1 33.702 181 102 5 288 465 87 252 4.18e-17 82.0
Msa1396200 AT1G19740.1 34.463 177 104 4 289 465 88 252 2.34e-16 79.7
Msa1396200 AT3G27330.1 40.244 82 47 2 186 266 720 800 2.12e-13 73.2

Find 146 sgRNAs with CRISPR-Local

Find 565 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCGGGATGTTATTCTTTC+TGG 0.064031 tig0022009:+72114 Msa1396200:CDS
ATCACTAGATTTGATGTTAT+TGG 0.166078 tig0022009:-70567 None:intergenic
ATATTCTTTGGCTTCATAAA+TGG 0.217287 tig0022009:+76733 Msa1396200:three_prime_UTR
CTAGCCATTCAAATATTCTT+TGG 0.260012 tig0022009:+76721 Msa1396200:three_prime_UTR
TCTCTTTCCTTTGTCCCTTC+TGG 0.260718 tig0022009:-75348 None:intergenic
TAAATCAGATTCTGAATAAA+AGG 0.272061 tig0022009:-76830 None:intergenic
TCACCTAATTGAACATGTTC+TGG 0.282932 tig0022009:-72631 None:intergenic
TGAACCTCGTTATAGACTTA+TGG 0.288842 tig0022009:+73379 Msa1396200:CDS
GCTTGTACAAAAGGGAAATT+TGG 0.299572 tig0022009:+69436 Msa1396200:CDS
TCCATGTGTATTAGAACAAT+TGG 0.305577 tig0022009:-76796 None:intergenic
GAAGGCTAATGCTCTTCTTC+TGG 0.306462 tig0022009:+71004 Msa1396200:CDS
GTGAATGTGCAATACCTAAA+AGG 0.312618 tig0022009:-72150 None:intergenic
GCCCCAGAACATGTTCAATT+AGG 0.331905 tig0022009:+72628 Msa1396200:CDS
ATGATCTATGCATTAAATAT+TGG 0.333748 tig0022009:-70765 None:intergenic
GATTTCGCAACCTCCGTTCT+TGG 0.338175 tig0022009:+75182 Msa1396200:CDS
ACAGGTTCATTAGCAGAGTT+TGG 0.343388 tig0022009:+74365 Msa1396200:CDS
ATCGAAGTGCAGCTTATATT+AGG 0.345900 tig0022009:+70606 Msa1396200:CDS
AGGAACGTTACCATTACTAT+TGG 0.359025 tig0022009:+76669 Msa1396200:three_prime_UTR
ACAGTATCATCTAGTTCAAC+TGG 0.363109 tig0022009:+72345 Msa1396200:CDS
AAAACAGGTAAGAAGAATAA+TGG 0.364926 tig0022009:+74193 Msa1396200:intron
CTTCGATTGCCGAGGATGAT+TGG 0.368141 tig0022009:-70590 None:intergenic
TTGGTTTGGTTGCAGGATAA+TGG 0.370188 tig0022009:+69371 Msa1396200:intron
CGACGTCGACGACTACGTTT+TGG 0.374689 tig0022009:+67210 Msa1396200:CDS
CGAGGTTCAAATATATTTAG+TGG 0.376203 tig0022009:-73365 None:intergenic
TTCATGTCTATTTCAGTCAA+TGG 0.382042 tig0022009:+72476 Msa1396200:CDS
ACCCGGAATATTAATTGAAA+AGG 0.387323 tig0022009:+66968 None:intergenic
ATTTCGCAACCTCCGTTCTT+GGG 0.404243 tig0022009:+75183 Msa1396200:CDS
TCTATATAAAAGCGACCATC+TGG 0.406073 tig0022009:-74546 None:intergenic
GTGTCCCATGACAATCCTTC+TGG 0.406472 tig0022009:-69395 None:intergenic
TAGAATGAAGAGAAGAAGGT+TGG 0.409136 tig0022009:-67073 None:intergenic
ACCATTTCAGCTGGGTTTGA+AGG 0.425497 tig0022009:+70929 Msa1396200:intron
GAGAAACTCGTGAATGTTGA+AGG 0.427907 tig0022009:+76147 Msa1396200:CDS
ATCATGTAGTAATTCCCTTC+GGG 0.432755 tig0022009:+72302 Msa1396200:intron
CACCTAATTGAACATGTTCT+GGG 0.434320 tig0022009:-72630 None:intergenic
TGTTTACGAGCTTGTACAAA+AGG 0.436112 tig0022009:+69427 Msa1396200:CDS
GTTATAATAGATGCTTCAAC+AGG 0.438756 tig0022009:+74347 Msa1396200:CDS
ATTTCCCATTCTACCCTCAA+TGG 0.443982 tig0022009:+67162 Msa1396200:exon
CATGATTATGTACAGATTGA+AGG 0.446466 tig0022009:+75151 Msa1396200:intron
GCAGAACTGTCCTGCACAAT+GGG 0.462841 tig0022009:-72599 None:intergenic
AATCTGATTTATACAAATGT+TGG 0.463084 tig0022009:+76842 Msa1396200:three_prime_UTR
AGTGGCCATTGAGGGTAGAA+TGG 0.466237 tig0022009:-67167 None:intergenic
TTCCTTTCAGCATATTCCTC+TGG 0.469774 tig0022009:-73257 None:intergenic
TATCATGTAGTAATTCCCTT+CGG 0.471872 tig0022009:+72301 Msa1396200:intron
GTCGTCGACGTCGAGAGAAT+CGG 0.472876 tig0022009:-67200 None:intergenic
GAAGCCAAAGAATATTTGAA+TGG 0.475786 tig0022009:-76725 None:intergenic
CCTCTGCTCGAAGAAATATC+AGG 0.480531 tig0022009:-76613 None:intergenic
CCATGTGTATTAGAACAATT+GGG 0.481217 tig0022009:-76795 None:intergenic
GCATTAGCCTTCAAAAGGTA+TGG 0.481312 tig0022009:-70993 None:intergenic
TCGTAGGCCTTCAGAAAGAT+TGG 0.481468 tig0022009:+76330 Msa1396200:CDS
GAAGAGCATTAGCCTTCAAA+AGG 0.485021 tig0022009:-70998 None:intergenic
TTCCATTCTGTTGTCTCGAA+AGG 0.487885 tig0022009:-69459 None:intergenic
CAGGTTCATACAGTATCTTC+AGG 0.490158 tig0022009:-72422 None:intergenic
TTATTAGAATGAAGAGAAGA+AGG 0.495033 tig0022009:-67077 None:intergenic
GAAGAGAAGAAGGTTGGAAA+AGG 0.501800 tig0022009:-67067 None:intergenic
ATCGTGTTGCAGAAGTTGAA+TGG 0.503817 tig0022009:+75307 Msa1396200:CDS
ATTTAGTGGAAACCTTTGAC+AGG 0.504501 tig0022009:-73351 None:intergenic
TAGAGAAATATGACGTGGCT+CGG 0.506027 tig0022009:+72097 Msa1396200:CDS
GGAACAGATGCCCATTGTGC+AGG 0.506693 tig0022009:+72589 Msa1396200:CDS
ACATACTTCGGCAAGTGTTG+TGG 0.508681 tig0022009:-70827 None:intergenic
TCAATTATTACGAGGACGCT+AGG 0.518927 tig0022009:+76879 Msa1396200:three_prime_UTR
AGAGAAATATGACGTGGCTC+GGG 0.522480 tig0022009:+72098 Msa1396200:CDS
CATACTTCGGCAAGTGTTGT+GGG 0.526024 tig0022009:-70826 None:intergenic
GGAGGTTGAGTGGCCATTGA+GGG 0.527230 tig0022009:-67175 None:intergenic
CTGAAGGCCTACGATTCGAG+AGG 0.527619 tig0022009:-76321 None:intergenic
GTTTACGAGCTTGTACAAAA+GGG 0.530579 tig0022009:+69428 Msa1396200:CDS
CTTTCCTTTGTCCCTTCTGG+CGG 0.530881 tig0022009:-75345 None:intergenic
TGCAGAAGTTGAATGGATAC+AGG 0.533884 tig0022009:+75314 Msa1396200:CDS
CAGCAGAAAGTGCTCGAACA+TGG 0.534893 tig0022009:+75986 Msa1396200:CDS
CTCCGTTCTTGGGATCAAGA+TGG 0.535243 tig0022009:+75193 Msa1396200:CDS
GCGCTCGGGGTCTCTTAATG+AGG 0.539035 tig0022009:-76178 None:intergenic
GTGGCCATTGAGGGTAGAAT+GGG 0.539239 tig0022009:-67166 None:intergenic
TCCGTTCTTGGGATCAAGAT+GGG 0.539331 tig0022009:+75194 Msa1396200:CDS
TCGCTACCCTCTCGAATCGT+AGG 0.543915 tig0022009:+76314 Msa1396200:CDS
TCAAAGTCATCATTCCGCTC+TGG 0.550649 tig0022009:-72387 None:intergenic
TTCATAAATGGCTGTTCATG+AGG 0.551824 tig0022009:+76745 Msa1396200:three_prime_UTR
ATGTTGTCTTACCCTGTCAA+AGG 0.552440 tig0022009:+73339 Msa1396200:CDS
GAAAGTGCTCGAACATGGAT+AGG 0.552863 tig0022009:+75991 Msa1396200:CDS
TATTCAAATTCCAATAGTAA+TGG 0.554157 tig0022009:-76679 None:intergenic
CCCAATTGTTCTAATACACA+TGG 0.555750 tig0022009:+76795 Msa1396200:three_prime_UTR
GAAGGATGCTGCAAAGCTTG+TGG 0.558715 tig0022009:+70947 Msa1396200:CDS
TAAAAGCGACCATCTGGAAG+TGG 0.562223 tig0022009:-74540 None:intergenic
GTGGGATCAAGCCCACTCAA+TGG 0.562899 tig0022009:-70808 None:intergenic
AGCAGAGTTTGGCTGTGAAG+TGG 0.562998 tig0022009:+74376 Msa1396200:CDS
AATGACAGTTTAGTCAACAT+TGG 0.563013 tig0022009:+73287 Msa1396200:CDS
CATCATCATCCTCAGAACAT+AGG 0.564721 tig0022009:+70785 Msa1396200:CDS
TCGAGACAACAGAATGGAAG+AGG 0.566392 tig0022009:+69463 Msa1396200:CDS
TGTGTGTGAAGAGAAGATTA+AGG 0.570548 tig0022009:-67106 None:intergenic
CAGGATGTTATGCCGCCAGA+AGG 0.571350 tig0022009:+75333 Msa1396200:CDS
AGGCAATCATCGGATGGGAA+TGG 0.572561 tig0022009:+74217 Msa1396200:CDS
ATTCTGAATAAAAGGTAATG+TGG 0.575188 tig0022009:-76822 None:intergenic
AATGGAAGGCAATCATCGGA+TGG 0.575328 tig0022009:+74211 Msa1396200:CDS
AGGAGGTTGAGTGGCCATTG+AGG 0.577583 tig0022009:-67176 None:intergenic
GAATAATGGAAGGCAATCAT+CGG 0.577826 tig0022009:+74207 Msa1396200:CDS
CGCTCGGGGTCTCTTAATGA+GGG 0.578663 tig0022009:-76177 None:intergenic
ACGGCAAAATGAATGTCCAC+AGG 0.579195 tig0022009:-72454 None:intergenic
TGTATGAAATGAAGCATCGA+GGG 0.580688 tig0022009:+67032 Msa1396200:five_prime_UTR
CCTGATATTTCTTCGAGCAG+AGG 0.586318 tig0022009:+76613 Msa1396200:CDS
AGCAGAACTGTCCTGCACAA+TGG 0.587723 tig0022009:-72600 None:intergenic
CTCTTTGAAGACATTCCCGA+AGG 0.588174 tig0022009:-72317 None:intergenic
CGGCAAAATGAATGTCCACA+GGG 0.593265 tig0022009:-72453 None:intergenic
AGGATGTTATGCCGCCAGAA+GGG 0.595082 tig0022009:+75334 Msa1396200:CDS
CTGTAGTATCTCTAATGCGT+AGG 0.595814 tig0022009:-76357 None:intergenic
ATGGACCAGAAGGATTGTCA+TGG 0.596967 tig0022009:+69390 Msa1396200:CDS
TTGCAGGATAATGGACCAGA+AGG 0.597081 tig0022009:+69380 Msa1396200:intron
GCTAAAGAAGCAGCAAGACA+AGG 0.598996 tig0022009:+76018 Msa1396200:CDS
TCGGGAATGTCTTCAAAGAG+TGG 0.601467 tig0022009:+72320 Msa1396200:CDS
GGCCTTTCGAGACAACAGAA+TGG 0.602857 tig0022009:+69457 Msa1396200:CDS
ATGGAAGGCAATCATCGGAT+GGG 0.603310 tig0022009:+74212 Msa1396200:CDS
AGAAGGGACAAAGGAAAGAG+AGG 0.605280 tig0022009:+75350 Msa1396200:CDS
TTCCAGAGGAATATGCTGAA+AGG 0.606002 tig0022009:+73255 Msa1396200:CDS
AGGAGATCCAATCTTTCTGA+AGG 0.606145 tig0022009:-76337 None:intergenic
ACCCATCTTGATCCCAAGAA+CGG 0.606671 tig0022009:-75195 None:intergenic
TTTCTTCGAGCAGAGGAACA+AGG 0.608043 tig0022009:+76620 Msa1396200:CDS
TTTAGTGGAAACCTTTGACA+GGG 0.610286 tig0022009:-73350 None:intergenic
AGAATCGGAAGGAGGTTGAG+TGG 0.612077 tig0022009:-67185 None:intergenic
TCTAGTGATCCAATCATCCT+CGG 0.612986 tig0022009:+70581 Msa1396200:CDS
CAGTATCATCTAGTTCAACT+GGG 0.617318 tig0022009:+72346 Msa1396200:CDS
CAGGTAAGAAGAATAATGGA+AGG 0.621017 tig0022009:+74197 Msa1396200:intron
TCGATGCTTCATTTCATACA+CGG 0.621973 tig0022009:-67029 None:intergenic
AGGTGTGAGCCACTTCCAGA+TGG 0.625380 tig0022009:+74531 Msa1396200:intron
TGGACCAGAAGGATTGTCAT+GGG 0.629901 tig0022009:+69391 Msa1396200:CDS
ATGTACAGATTGAAGGTCGT+AGG 0.631279 tig0022009:+75158 Msa1396200:intron
ACTCAATGGCCTATGTTCTG+AGG 0.635518 tig0022009:-70794 None:intergenic
TCAGAACATAGGCCATTGAG+TGG 0.644909 tig0022009:+70796 Msa1396200:CDS
CTATTTCAGTCAATGGATCG+TGG 0.649425 tig0022009:+72483 Msa1396200:CDS
TGAAGGCCTACGATTCGAGA+GGG 0.654293 tig0022009:-76320 None:intergenic
TATGCCGCCAGAAGGGACAA+AGG 0.655113 tig0022009:+75341 Msa1396200:CDS
ACGTCGAGAGAATCGGAAGG+AGG 0.657020 tig0022009:-67193 None:intergenic
GGCAAAATGAATGTCCACAG+GGG 0.665861 tig0022009:-72452 None:intergenic
TCTTTGAAGACATTCCCGAA+GGG 0.670281 tig0022009:-72316 None:intergenic
TTGACTGAAATAGACATGAA+CGG 0.674075 tig0022009:-72473 None:intergenic
TCGACGTCGAGAGAATCGGA+AGG 0.674517 tig0022009:-67196 None:intergenic
CAGAACATAGGCCATTGAGT+GGG 0.678923 tig0022009:+70797 Msa1396200:CDS
ACCTAATTGAACATGTTCTG+GGG 0.682254 tig0022009:-72629 None:intergenic
GCAAAATGAATGTCCACAGG+GGG 0.684264 tig0022009:-72451 None:intergenic
GTGTATGAAATGAAGCATCG+AGG 0.701166 tig0022009:+67031 Msa1396200:five_prime_UTR
AAGCTGCACTTCGATTGCCG+AGG 0.702323 tig0022009:-70598 None:intergenic
GTATGAAATGAAGCATCGAG+GGG 0.702901 tig0022009:+67033 Msa1396200:five_prime_UTR
CATACAAAAGAACTTTCCAG+AGG 0.709830 tig0022009:+73241 Msa1396200:CDS
TTCTTGTAGAGAATTAGACG+AGG 0.721915 tig0022009:+76590 Msa1396200:intron
CATCTTGATCCCAAGAACGG+AGG 0.722655 tig0022009:-75192 None:intergenic
GCAGTTAGAGAAATATGACG+TGG 0.740709 tig0022009:+72092 Msa1396200:intron
CTCACCATAAGTCTATAACG+AGG 0.744121 tig0022009:-73383 None:intergenic
TATCATCTAGTTCAACTGGG+AGG 0.750577 tig0022009:+72349 Msa1396200:CDS
GTACACATGCACAACCAGAG+CGG 0.778485 tig0022009:+72373 Msa1396200:CDS
ACGCATTAGAGATACTACAG+AGG 0.789082 tig0022009:+76360 Msa1396200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAGAAAATATTCTTTTTTT+AGG - tig0022009:68189-68208 None:intergenic 10.0%
!!! ATTAATACTAACATTTTAAT+CGG - tig0022009:69675-69694 None:intergenic 10.0%
!!! TCAATATTTTTCTTTTAAAT+TGG + tig0022009:70639-70658 Msa1396200:intron 10.0%
!!! AAATTTATTTTTTTCTTACT+AGG + tig0022009:71102-71121 Msa1396200:intron 10.0%
!! AATTAAATCTGTAAAAAAAA+TGG - tig0022009:76476-76495 None:intergenic 10.0%
!! TTATTCAATGAATCTAAAAA+AGG - tig0022009:68115-68134 None:intergenic 15.0%
!! TTAAAATGTTAGTATTAATC+CGG + tig0022009:69676-69695 Msa1396200:intron 15.0%
!!! GTTCACTTTTTTTTTTTTTT+TGG + tig0022009:70318-70337 Msa1396200:intron 15.0%
!!! AATTTTATAAAGAGATATCA+AGG + tig0022009:70443-70462 Msa1396200:intron 15.0%
!!! TTTCTAAAACAAAAATATCA+GGG - tig0022009:71084-71103 None:intergenic 15.0%
!!! TTTTCTAAAACAAAAATATC+AGG - tig0022009:71085-71104 None:intergenic 15.0%
!!! TAATTCTAATACTTTTGAAT+AGG + tig0022009:71573-71592 Msa1396200:intron 15.0%
!! AAGGAATAATTACTAAATTT+GGG - tig0022009:72786-72805 None:intergenic 15.0%
!!! ATGAATTTTTTTTTTTCCTT+TGG - tig0022009:73611-73630 None:intergenic 15.0%
!! AATATGATGTAAAATTTCTT+GGG - tig0022009:73710-73729 None:intergenic 15.0%
!! AAATATGATGTAAAATTTCT+TGG - tig0022009:73711-73730 None:intergenic 15.0%
!!! AATTTTGAGCTATAAATAAA+TGG - tig0022009:73944-73963 None:intergenic 15.0%
!! ATATAACTTAAACAAGAAAA+TGG - tig0022009:74270-74289 None:intergenic 15.0%
!!! TGAATTTTTTTCTCAAAAAA+AGG - tig0022009:75492-75511 None:intergenic 15.0%
!! AATAGTTATTGGTATTAATA+GGG - tig0022009:75575-75594 None:intergenic 15.0%
!! AAATAGTTATTGGTATTAAT+AGG - tig0022009:75576-75595 None:intergenic 15.0%
!! TTAATTAAATAAACCTAGTA+AGG + tig0022009:76490-76509 Msa1396200:intron 15.0%
!!! ATAACTTTTGTGAAACTATT+TGG - tig0022009:67650-67669 None:intergenic 20.0%
!! GCAATATTTCACAATAATAA+GGG - tig0022009:67678-67697 None:intergenic 20.0%
!!! AGAAGTATTTAATTGATTCT+AGG + tig0022009:67920-67939 Msa1396200:intron 20.0%
!!! TATTTTCTTATATTTGAGAC+CGG - tig0022009:68199-68218 None:intergenic 20.0%
!!! TATTTTCTTATATTTGAGAC+CGG + tig0022009:68199-68218 Msa1396200:intron 20.0%
!! CAAAAAAAAGAGAGAAAAAA+AGG - tig0022009:68326-68345 None:intergenic 20.0%
!! AATTTGTGATTCAATAACAA+TGG + tig0022009:69118-69137 Msa1396200:intron 20.0%
!! ATTTGTGATTCAATAACAAT+GGG + tig0022009:69119-69138 Msa1396200:intron 20.0%
!!! AAACAAATAAACATTTTCTC+TGG + tig0022009:69337-69356 Msa1396200:intron 20.0%
!!! AACAAATAAACATTTTCTCT+GGG + tig0022009:69338-69357 Msa1396200:intron 20.0%
!!! AAAATAGTGTGCTTTATTTT+TGG + tig0022009:69491-69510 Msa1396200:intron 20.0%
!! AAAAGAATAAAAAATGTTGC+TGG - tig0022009:69574-69593 None:intergenic 20.0%
!! AGATTCATTAACTTATGAAA+TGG + tig0022009:69826-69845 Msa1396200:intron 20.0%
!!! TAGCTTTATGTCAAAAATTT+GGG + tig0022009:69873-69892 Msa1396200:intron 20.0%
!!! CAGTATTTTTTTGCTATAAT+TGG + tig0022009:70125-70144 Msa1396200:intron 20.0%
!! AACTATATATGTAATGCTTA+TGG - tig0022009:70223-70242 None:intergenic 20.0%
!! CTTTATAAAATTCTACAAGT+AGG - tig0022009:70435-70454 None:intergenic 20.0%
!! ATGATCTATGCATTAAATAT+TGG - tig0022009:70768-70787 None:intergenic 20.0%
!!! TTCTAAAACAAAAATATCAG+GGG - tig0022009:71083-71102 None:intergenic 20.0%
!!! TTTATTTTTTTCTTACTAGG+TGG + tig0022009:71105-71124 Msa1396200:intron 20.0%
!!! TTATTTTTTTCTTACTAGGT+GGG + tig0022009:71106-71125 Msa1396200:intron 20.0%
!!! TCAAATGTTTTCTCTTTTAA+AGG + tig0022009:71155-71174 Msa1396200:intron 20.0%
!! ACGTAGTAATATATATACAA+TGG + tig0022009:71844-71863 Msa1396200:intron 20.0%
!! CGTAGTAATATATATACAAT+GGG + tig0022009:71845-71864 Msa1396200:intron 20.0%
!!! ATGTTGATTATATTTTCCAT+AGG + tig0022009:72519-72538 Msa1396200:intron 20.0%
!!! ATTATTGTTCTCATTTGTTA+GGG + tig0022009:72568-72587 Msa1396200:intron 20.0%
!!! AAAACAAAGAAATTGATTCA+AGG - tig0022009:72707-72726 None:intergenic 20.0%
!!! GTTTTTCTTGTTATAGTTTA+TGG + tig0022009:72722-72741 Msa1396200:intron 20.0%
!! GAAGGAATAATTACTAAATT+TGG - tig0022009:72787-72806 None:intergenic 20.0%
!! AAATTGTGTATTTAATGCAT+TGG - tig0022009:72832-72851 None:intergenic 20.0%
!! AAATAATGAATCAAGTCTAA+TGG - tig0022009:73165-73184 None:intergenic 20.0%
!!! TTCTGGAAAAATAATTTGAA+TGG + tig0022009:73899-73918 Msa1396200:intron 20.0%
!!! TTATTGAATCTTTTTTCTCA+TGG + tig0022009:74167-74186 Msa1396200:intron 20.0%
!!! TATTGAATCTTTTTTCTCAT+GGG + tig0022009:74168-74187 Msa1396200:intron 20.0%
!!! TATTTGAGACTATTTTTTTC+AGG - tig0022009:74434-74453 None:intergenic 20.0%
!! TAAAAATATATTCTACTGCA+TGG + tig0022009:74505-74524 Msa1396200:intron 20.0%
!! ATAGAGGTAAAAAATTTAAC+TGG + tig0022009:74564-74583 Msa1396200:intron 20.0%
!! CATTATTTATGATATTTGTG+TGG + tig0022009:74595-74614 Msa1396200:intron 20.0%
!!! ATAATCATGATTTGTTTTGA+AGG - tig0022009:75140-75159 None:intergenic 20.0%
!! CATGAAACATTAAGATATAA+AGG - tig0022009:75282-75301 None:intergenic 20.0%
!! AAAAAAGGTGGTTATATATA+AGG - tig0022009:75477-75496 None:intergenic 20.0%
!!! ATTTTTTTCTCAAAAAAAGG+TGG - tig0022009:75489-75508 None:intergenic 20.0%
!! TGTATCTAGTAATTTGAATT+CGG - tig0022009:75529-75548 None:intergenic 20.0%
!! ATAGTTATTGGTATTAATAG+GGG - tig0022009:75574-75593 None:intergenic 20.0%
!!! TCATTTTGCAAAATAGTTAT+TGG - tig0022009:75586-75605 None:intergenic 20.0%
!!! ATTTGTACAGAAGATATTTT+AGG + tig0022009:75624-75643 Msa1396200:intron 20.0%
!!! TTCAAACATCTAATTTTTCA+AGG - tig0022009:75786-75805 None:intergenic 20.0%
!! CATTAAATAATAAACCATTG+AGG - tig0022009:75827-75846 None:intergenic 20.0%
!! AATAATGCATACAACATTAA+GGG - tig0022009:75876-75895 None:intergenic 20.0%
!! TAATAATGCATACAACATTA+AGG - tig0022009:75877-75896 None:intergenic 20.0%
!! AGAAAAGCTGTATTAATATT+TGG - tig0022009:76517-76536 None:intergenic 20.0%
!!! AATATTAATACAGCTTTTCT+AGG + tig0022009:76517-76536 Msa1396200:intron 20.0%
!! TATTCAAATTCCAATAGTAA+TGG - tig0022009:76682-76701 None:intergenic 20.0%
!! TAAATCAGATTCTGAATAAA+AGG - tig0022009:76833-76852 None:intergenic 20.0%
!! AATCTGATTTATACAAATGT+TGG + tig0022009:76842-76861 Msa1396200:three_prime_UTR 20.0%
!!! TAAAGTTTTCAATTATTACG+AGG + tig0022009:76871-76890 Msa1396200:three_prime_UTR 20.0%
!! TTCTAGAAAAAAATACGTAG+TGG + tig0022009:66998-67017 Msa1396200:five_prime_UTR 25.0%
!! AAAAAATACGTAGTGGAATT+TGG + tig0022009:67005-67024 Msa1396200:five_prime_UTR 25.0%
! TTATTAGAATGAAGAGAAGA+AGG - tig0022009:67080-67099 None:intergenic 25.0%
!!! AAAAAACTATCACGGTTTTT+TGG + tig0022009:67302-67321 Msa1396200:intron 25.0%
! CGCAATATTTCACAATAATA+AGG - tig0022009:67679-67698 None:intergenic 25.0%
! GAAATATTGCGTTTGAAAAA+CGG + tig0022009:67688-67707 Msa1396200:intron 25.0%
! GTGCTTATTAAATGAATGTT+TGG + tig0022009:67802-67821 Msa1396200:intron 25.0%
! TCACTTATGTTAAAATCCTT+TGG - tig0022009:67896-67915 None:intergenic 25.0%
! CGTGTTAAACAATCAATTTA+AGG - tig0022009:67957-67976 None:intergenic 25.0%
! CACGTAAATATGTGTTTAAA+CGG + tig0022009:67973-67992 Msa1396200:intron 25.0%
! ACGTAAATATGTGTTTAAAC+GGG + tig0022009:67974-67993 Msa1396200:intron 25.0%
!!! TTCTCTCTTTTTTTTGTGTA+TGG + tig0022009:68330-68349 Msa1396200:intron 25.0%
! TATGGTTTCAAAGTTGAATA+TGG + tig0022009:68348-68367 Msa1396200:intron 25.0%
! ATGGTTTCAAAGTTGAATAT+GGG + tig0022009:68349-68368 Msa1396200:intron 25.0%
! TAAAAGTCAAAGGGATATTA+AGG - tig0022009:68396-68415 None:intergenic 25.0%
! CCTAACAATTAAAAGTCAAA+GGG - tig0022009:68405-68424 None:intergenic 25.0%
! ACCTAACAATTAAAAGTCAA+AGG - tig0022009:68406-68425 None:intergenic 25.0%
!!! GTTAGTTTGTAAAAGTATGT+AGG + tig0022009:68550-68569 Msa1396200:intron 25.0%
! TTTCTTACTGTCATTGTAAA+TGG + tig0022009:68573-68592 Msa1396200:intron 25.0%
!! AAGCAAAGCTCTTTTATATT+TGG - tig0022009:68987-69006 None:intergenic 25.0%
! TTGACTTTGTAAACATCATT+TGG - tig0022009:69031-69050 None:intergenic 25.0%
! TTGAGTGTTTCAAACATAAT+GGG - tig0022009:69297-69316 None:intergenic 25.0%
! TTTGAGTGTTTCAAACATAA+TGG - tig0022009:69298-69317 None:intergenic 25.0%
!! ATTATGTTTGAAACACTCAA+AGG + tig0022009:69297-69316 Msa1396200:intron 25.0%
!! TGTTTTCATCATGATGTATT+GGG - tig0022009:69718-69737 None:intergenic 25.0%
!! ATGTTTTCATCATGATGTAT+TGG - tig0022009:69719-69738 None:intergenic 25.0%
! AAACATAAACGAACAGATTA+TGG + tig0022009:69733-69752 Msa1396200:intron 25.0%
! ACATAAATGAACAGATTATG+AGG + tig0022009:69758-69777 Msa1396200:intron 25.0%
! ATTAACTTATGAAATGGAAG+TGG + tig0022009:69832-69851 Msa1396200:intron 25.0%
! TTAACTTATGAAATGGAAGT+GGG + tig0022009:69833-69852 Msa1396200:intron 25.0%
!!! GTAGCTTTATGTCAAAAATT+TGG + tig0022009:69872-69891 Msa1396200:intron 25.0%
! TATGTCAAAAATTTGGGAAA+AGG + tig0022009:69879-69898 Msa1396200:intron 25.0%
! ATGTCAAAAATTTGGGAAAA+GGG + tig0022009:69880-69899 Msa1396200:intron 25.0%
! TTAAATAAATGCATGGGTAA+AGG - tig0022009:69971-69990 None:intergenic 25.0%
! GGATGATTAAATAAATGCAT+GGG - tig0022009:69977-69996 None:intergenic 25.0%
! AGGATGATTAAATAAATGCA+TGG - tig0022009:69978-69997 None:intergenic 25.0%
! AAACGCATTCTATATAATAC+TGG - tig0022009:70056-70075 None:intergenic 25.0%
!! TGAAAAACACTTCTCAATTT+TGG + tig0022009:70379-70398 Msa1396200:intron 25.0%
! ATCTTTGCGATTATTTATTC+AGG + tig0022009:70523-70542 Msa1396200:intron 25.0%
! ATCACTAGATTTGATGTTAT+TGG - tig0022009:70570-70589 None:intergenic 25.0%
! TGATTGGAAAATGTTATCAT+TGG - tig0022009:70738-70757 None:intergenic 25.0%
!! AATGATAACATTTTCCAATC+AGG + tig0022009:70737-70756 Msa1396200:intron 25.0%
!!! TATTTTTTTCTTACTAGGTG+GGG + tig0022009:71107-71126 Msa1396200:intron 25.0%
! GTGATTCAAGAGAATAATAA+GGG + tig0022009:71319-71338 Msa1396200:intron 25.0%
! TGATTCAAGAGAATAATAAG+GGG + tig0022009:71320-71339 Msa1396200:intron 25.0%
!! GTTGTATTTAAAATCACAGA+AGG - tig0022009:71472-71491 None:intergenic 25.0%
! ACATATCTCATTCTTACAAA+TGG + tig0022009:71549-71568 Msa1396200:intron 25.0%
! CTAATAATCAACCAAACAAA+TGG + tig0022009:71629-71648 Msa1396200:intron 25.0%
!! ATAACTCATTTTACCACTAT+TGG + tig0022009:72196-72215 Msa1396200:intron 25.0%
! TTTACCACTATTGGAAATAT+AGG + tig0022009:72205-72224 Msa1396200:intron 25.0%
! GATTATTGTTCTCATTTGTT+AGG + tig0022009:72567-72586 Msa1396200:intron 25.0%
!!! TGTAATAGTTGACTTTTTGA+AGG - tig0022009:72805-72824 None:intergenic 25.0%
! AGTTAATAGGAACAGAAATT+AGG - tig0022009:73195-73214 None:intergenic 25.0%
! ATTGATAGAGATATGTTAGA+GGG - tig0022009:73651-73670 None:intergenic 25.0%
! ACAGTCAGTTAATACTAATT+TGG + tig0022009:74043-74062 Msa1396200:intron 25.0%
! CAGTCAGTTAATACTAATTT+GGG + tig0022009:74044-74063 Msa1396200:intron 25.0%
! TCCATTTAGTTAGTGATAAA+AGG + tig0022009:74096-74115 Msa1396200:intron 25.0%
!! ACCTTTTATCACTAACTAAA+TGG - tig0022009:74100-74119 None:intergenic 25.0%
! AAAACAGGTAAGAAGAATAA+TGG + tig0022009:74193-74212 Msa1396200:intron 25.0%
! AACAAGAAAATGGAAAGAAA+TGG - tig0022009:74260-74279 None:intergenic 25.0%
! CTTATTATACATATTCCAGA+TGG + tig0022009:74904-74923 Msa1396200:intron 25.0%
!!! GATTGGTTATTTGGTTTTAA+TGG + tig0022009:75014-75033 Msa1396200:intron 25.0%
! ATGTAAGTTCACTTTAATTC+TGG + tig0022009:75373-75392 Msa1396200:intron 25.0%
! GTATCTAGTAATTTGAATTC+GGG - tig0022009:75528-75547 None:intergenic 25.0%
! AGGAACATTTGTATACAAAA+TGG + tig0022009:75644-75663 Msa1396200:intron 25.0%
!!! TTGTACCTTATTTTAGTTAC+TGG + tig0022009:75948-75967 Msa1396200:intron 25.0%
! CAATTCCAGTAACTAAAATA+AGG - tig0022009:75956-75975 None:intergenic 25.0%
! CATGATGTATAAACAAATCT+AGG - tig0022009:76065-76084 None:intergenic 25.0%
! TATATAGTTTAGTACTTCTG+AGG - tig0022009:76097-76116 None:intergenic 25.0%
! ATTAATATTTGGTCCTTACT+AGG - tig0022009:76506-76525 None:intergenic 25.0%
! AATTCAGTAAAAATAAGCTG+AGG + tig0022009:76649-76668 Msa1396200:exon 25.0%
!! ATATTCTTTGGCTTCATAAA+TGG + tig0022009:76733-76752 Msa1396200:three_prime_UTR 25.0%
! ATTCTGAATAAAAGGTAATG+TGG - tig0022009:76825-76844 None:intergenic 25.0%
!!! TTTTTTGCGTCACATTTTCT+CGG - tig0022009:67288-67307 None:intergenic 30.0%
!!! TTTACACGTGTTTTTTGAAG+CGG + tig0022009:67365-67384 Msa1396200:intron 30.0%
AACCAAGTGTATGTTTGAAT+TGG - tig0022009:67446-67465 None:intergenic 30.0%
!!! AACATACACTTGGTTTTGTT+TGG + tig0022009:67451-67470 Msa1396200:intron 30.0%
TTGAACAACTTGTGAAAATG+AGG + tig0022009:67578-67597 Msa1396200:intron 30.0%
ATTTCACAATAATAAGGGCA+TGG - tig0022009:67673-67692 None:intergenic 30.0%
!! TTGATTTTGACACGTTTGAT+TGG + tig0022009:67866-67885 Msa1396200:intron 30.0%
CATTGAGTAGTTAATGTATC+TGG - tig0022009:68164-68183 None:intergenic 30.0%
!! CCCTTTGACTTTTAATTGTT+AGG + tig0022009:68402-68421 Msa1396200:intron 30.0%
! TTGAATGCAATCACATGTTT+TGG - tig0022009:68687-68706 None:intergenic 30.0%
TAAACATGTGTAATGTCAGA+AGG - tig0022009:68828-68847 None:intergenic 30.0%
AAATCTTGTATGAATAGCTG+TGG + tig0022009:68879-68898 Msa1396200:intron 30.0%
!! ATGTTTTATTGAGTGAGCAT+AGG - tig0022009:69093-69112 None:intergenic 30.0%
AGAAAAGTAACCAGAAATTG+AGG - tig0022009:69155-69174 None:intergenic 30.0%
CTATCTACACTTTGTTACTA+TGG - tig0022009:69188-69207 None:intergenic 30.0%
AACAAAGTGTAGATAGTGAA+AGG + tig0022009:69192-69211 Msa1396200:intron 30.0%
ACTCAAACTAAAAAAAGCGA+AGG - tig0022009:69223-69242 None:intergenic 30.0%
TCTCTACGCAAAATGTATTA+TGG + tig0022009:69595-69614 Msa1396200:intron 30.0%
CTCTACGCAAAATGTATTAT+GGG + tig0022009:69596-69615 Msa1396200:intron 30.0%
AATCATCCTATGCAAAATAC+AGG + tig0022009:69989-70008 Msa1396200:intron 30.0%
! TAAAGACCTGTATTTTGCAT+AGG - tig0022009:69998-70017 None:intergenic 30.0%
! TTGATTCACATGTCTTTTCT+TGG + tig0022009:70163-70182 Msa1396200:intron 30.0%
TTGATGGAAGCTAAATGAAT+TGG + tig0022009:70191-70210 Msa1396200:intron 30.0%
AGGAATTATTCCATACATAC+AGG + tig0022009:70463-70482 Msa1396200:intron 30.0%
GGAATTATTCCATACATACA+GGG + tig0022009:70464-70483 Msa1396200:intron 30.0%
GAATTATTCCATACATACAG+GGG + tig0022009:70465-70484 Msa1396200:intron 30.0%
ATAATCGCAAAGATCAACAT+TGG - tig0022009:70517-70536 None:intergenic 30.0%
! AGATCTGAAGCAAAACTATT+TGG - tig0022009:70694-70713 None:intergenic 30.0%
! AAATATTGGCTAATCCTGAT+TGG - tig0022009:70754-70773 None:intergenic 30.0%
TGATCCAATAGAACATACTT+CGG - tig0022009:70842-70861 None:intergenic 30.0%
! AGTAAAACCATACCTTTTGA+AGG + tig0022009:70986-71005 Msa1396200:CDS 30.0%
! TGATCTCTTTGGTAGTTTAT+AGG + tig0022009:71053-71072 Msa1396200:intron 30.0%
! GATCTCTTTGGTAGTTTATA+GGG + tig0022009:71054-71073 Msa1396200:intron 30.0%
!!! ATTTTTTTCTTACTAGGTGG+GGG + tig0022009:71108-71127 Msa1396200:intron 30.0%
! ATTTGAAACACCTAGCTAAA+TGG - tig0022009:71141-71160 None:intergenic 30.0%
GGTGATTCAAGAGAATAATA+AGG + tig0022009:71318-71337 Msa1396200:intron 30.0%
GGATATAGTTACACAGATTA+AGG + tig0022009:71416-71435 Msa1396200:intron 30.0%
ACACAGATTAAGGATTTGAT+TGG + tig0022009:71426-71445 Msa1396200:intron 30.0%
! TTTTAAATACAACCCCTGTA+TGG + tig0022009:71479-71498 Msa1396200:intron 30.0%
GTATATGTACAAATGTGAAG+AGG - tig0022009:71678-71697 None:intergenic 30.0%
CATCATCATGATATAAAAGC+AGG - tig0022009:72028-72047 None:intergenic 30.0%
TCAACCTATATTTCCAATAG+TGG - tig0022009:72212-72231 None:intergenic 30.0%
TATCAAATGCAATGAAACAG+TGG - tig0022009:72283-72302 None:intergenic 30.0%
TATCATGTAGTAATTCCCTT+CGG + tig0022009:72301-72320 Msa1396200:intron 30.0%
TTGACTGAAATAGACATGAA+CGG - tig0022009:72476-72495 None:intergenic 30.0%
TTCATGTCTATTTCAGTCAA+TGG + tig0022009:72476-72495 Msa1396200:CDS 30.0%
! ACAGATCATATGTTTTCCTA+TGG - tig0022009:72538-72557 None:intergenic 30.0%
GAAAACATATGATCTGTGTT+AGG + tig0022009:72541-72560 Msa1396200:intron 30.0%
CACTCTTTAAGCACTTTAAA+TGG - tig0022009:72870-72889 None:intergenic 30.0%
ACATATCCCATAGTTTATAG+TGG + tig0022009:72908-72927 Msa1396200:intron 30.0%
CATATCCCATAGTTTATAGT+GGG + tig0022009:72909-72928 Msa1396200:intron 30.0%
TCACGAATTCGAACTATAAT+AGG + tig0022009:72940-72959 Msa1396200:intron 30.0%
AAGTCCTTTAATACCTACAA+TGG + tig0022009:73071-73090 Msa1396200:intron 30.0%
AGTCCTTTAATACCTACAAT+GGG + tig0022009:73072-73091 Msa1396200:intron 30.0%
ATACCCATTGTAGGTATTAA+AGG - tig0022009:73078-73097 None:intergenic 30.0%
TATCAGATTAAACTGAGTTG+AGG - tig0022009:73115-73134 None:intergenic 30.0%
AATGACAGTTTAGTCAACAT+TGG + tig0022009:73287-73306 Msa1396200:CDS 30.0%
CGAGGTTCAAATATATTTAG+TGG - tig0022009:73368-73387 None:intergenic 30.0%
AATGTCTTGAATGTGAAAGT+TGG + tig0022009:73464-73483 Msa1396200:intron 30.0%
!!! TTGGTGATTAGTTTTCCTTT+CGG + tig0022009:73483-73502 Msa1396200:intron 30.0%
!!! CTATCATATGCTTTTTCCAA+AGG + tig0022009:73592-73611 Msa1396200:intron 30.0%
GATTGATAGAGATATGTTAG+AGG - tig0022009:73652-73671 None:intergenic 30.0%
CATATCTCTATCAATCTTCT+TGG + tig0022009:73656-73675 Msa1396200:intron 30.0%
GTATATAATTTCCATGTGTC+AGG + tig0022009:73682-73701 Msa1396200:intron 30.0%
! TTCTTTTATCCAGCTTACAA+CGG - tig0022009:73789-73808 None:intergenic 30.0%
GCTGGATAAAAGAAATATTC+TGG + tig0022009:73795-73814 Msa1396200:intron 30.0%
TGTAACAATTGCTAAAACTC+AGG - tig0022009:73827-73846 None:intergenic 30.0%
!! GAGTTTTAGCAATTGTTACA+TGG + tig0022009:73827-73846 Msa1396200:intron 30.0%
TAGCAATTGTTACATGGTAA+AGG + tig0022009:73833-73852 Msa1396200:intron 30.0%
! TATTTTTCCAGAATCCAATC+AGG - tig0022009:73892-73911 None:intergenic 30.0%
TAGCTCAAAATTGCAACATT+TGG + tig0022009:73952-73971 Msa1396200:intron 30.0%
! AAATTGTCTGAAACTCTGAA+TGG + tig0022009:74133-74152 Msa1396200:intron 30.0%
! TTTTTCTCATGGGAAAAAAC+AGG + tig0022009:74178-74197 Msa1396200:intron 30.0%
GATTTGTCTATTGATCTTCT+AGG + tig0022009:74325-74344 Msa1396200:intron 30.0%
GTTATAATAGATGCTTCAAC+AGG + tig0022009:74347-74366 Msa1396200:CDS 30.0%
GATGAGAAGATATTTCATGT+GGG - tig0022009:74471-74490 None:intergenic 30.0%
AGATGAGAAGATATTTCATG+TGG - tig0022009:74472-74491 None:intergenic 30.0%
TTATGATATTTGTGTGGATG+AGG + tig0022009:74601-74620 Msa1396200:intron 30.0%
CGATTGATACAAAAAAGGAA+AGG - tig0022009:74687-74706 None:intergenic 30.0%
AGAAGCGATTGATACAAAAA+AGG - tig0022009:74692-74711 None:intergenic 30.0%
ACTTCATGTGAGACTATATT+TGG - tig0022009:74718-74737 None:intergenic 30.0%
!! ATTTTACTTTTCGTCACAGT+TGG + tig0022009:74992-75011 Msa1396200:intron 30.0%
GAATTCGATCGAAATTTCTA+AGG - tig0022009:75061-75080 None:intergenic 30.0%
CATGATTATGTACAGATTGA+AGG + tig0022009:75151-75170 Msa1396200:intron 30.0%
! TTGAATTCGGGTTATATTGA+GGG - tig0022009:75516-75535 None:intergenic 30.0%
! TTTGAATTCGGGTTATATTG+AGG - tig0022009:75517-75536 None:intergenic 30.0%
GGTATTAATAGGGGTTTATT+TGG - tig0022009:75565-75584 None:intergenic 30.0%
!!! TAAAATGTTTTGACTGACCA+TGG + tig0022009:75682-75701 Msa1396200:intron 30.0%
ACATCTTGCATATTGATCTA+AGG - tig0022009:75735-75754 None:intergenic 30.0%
! TCTTTGCCAAAATTTGAAAC+CGG + tig0022009:75757-75776 Msa1396200:intron 30.0%
!!! ATCTAATTTTTCAAGGTTCC+CGG - tig0022009:75779-75798 None:intergenic 30.0%
! CCATTGAGGATTTTCAATTT+GGG - tig0022009:75813-75832 None:intergenic 30.0%
! ACCATTGAGGATTTTCAATT+TGG - tig0022009:75814-75833 None:intergenic 30.0%
! GCTTAGATTTTCCTATAAGT+TGG + tig0022009:75846-75865 Msa1396200:intron 30.0%
AAACAAATCTAGGTGAACAA+TGG - tig0022009:76055-76074 None:intergenic 30.0%
CTAGCCATTCAAATATTCTT+TGG + tig0022009:76721-76740 Msa1396200:three_prime_UTR 30.0%
GAAGCCAAAGAATATTTGAA+TGG - tig0022009:76728-76747 None:intergenic 30.0%
CCATGTGTATTAGAACAATT+GGG - tig0022009:76798-76817 None:intergenic 30.0%
TCCATGTGTATTAGAACAAT+TGG - tig0022009:76799-76818 None:intergenic 30.0%
TCGATGCTTCATTTCATACA+CGG - tig0022009:67032-67051 None:intergenic 35.0%
!! TGTATGAAATGAAGCATCGA+GGG + tig0022009:67032-67051 Msa1396200:five_prime_UTR 35.0%
TAGAATGAAGAGAAGAAGGT+TGG - tig0022009:67076-67095 None:intergenic 35.0%
TGTGTGTGAAGAGAAGATTA+AGG - tig0022009:67109-67128 None:intergenic 35.0%
TGTGACGCAAAAAACTATCA+CGG + tig0022009:67294-67313 Msa1396200:intron 35.0%
AGCCAATTCAAACATACACT+TGG + tig0022009:67441-67460 Msa1396200:intron 35.0%
!!! ACGTTTGATTGGTTTTCCAA+AGG + tig0022009:67877-67896 Msa1396200:intron 35.0%
! TTCTTATATTTGAGACCGGA+GGG - tig0022009:68203-68222 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG - tig0022009:68202-68221 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG + tig0022009:68202-68221 Msa1396200:intron 35.0%
! TTCTTATATTTGAGACCGGA+GGG + tig0022009:68203-68222 Msa1396200:intron 35.0%
TAATAACCATATACTCCCTC+CGG - tig0022009:68221-68240 None:intergenic 35.0%
AGGGATATTAAGGTAACAAG+AGG - tig0022009:68386-68405 None:intergenic 35.0%
!!! AGACTGTCATTTTCTCTTCT+TGG - tig0022009:68436-68455 None:intergenic 35.0%
! TTTTTCTGTATCATGAGCTG+TGG + tig0022009:68506-68525 Msa1396200:intron 35.0%
!!! ATCATGAGCTGTGGTTTTTT+TGG + tig0022009:68515-68534 Msa1396200:intron 35.0%
!!! TCATGAGCTGTGGTTTTTTT+GGG + tig0022009:68516-68535 Msa1396200:intron 35.0%
!! CAAATTTTTACCAGTGTCGA+CGG + tig0022009:68722-68741 Msa1396200:intron 35.0%
TAGCTGTGGTGAAAATCTAA+TGG + tig0022009:68893-68912 Msa1396200:intron 35.0%
TTACTCGATGCTCACAATTA+CGG - tig0022009:69246-69265 None:intergenic 35.0%
! TGTTTCAAACATAATGGGAC+AGG - tig0022009:69292-69311 None:intergenic 35.0%
! GTTTGAAACACTCAAAGGAA+TGG + tig0022009:69302-69321 Msa1396200:intron 35.0%
TGTTTACGAGCTTGTACAAA+AGG + tig0022009:69427-69446 Msa1396200:CDS 35.0%
GTTTACGAGCTTGTACAAAA+GGG + tig0022009:69428-69447 Msa1396200:CDS 35.0%
GCTTGTACAAAAGGGAAATT+TGG + tig0022009:69436-69455 Msa1396200:CDS 35.0%
TTTCATCATGATGTATTGGG+AGG - tig0022009:69715-69734 None:intergenic 35.0%
AATACTGGATAGACGTAACA+GGG - tig0022009:70041-70060 None:intergenic 35.0%
TAATACTGGATAGACGTAAC+AGG - tig0022009:70042-70061 None:intergenic 35.0%
! TCTTTTCTTGGTCTGTTTGA+TGG + tig0022009:70175-70194 Msa1396200:intron 35.0%
GAAGCTAAATGAATTGGTGT+TGG + tig0022009:70197-70216 Msa1396200:intron 35.0%
! ACACTTCTCAATTTTGGATG+AGG + tig0022009:70385-70404 Msa1396200:intron 35.0%
! CACTTCTCAATTTTGGATGA+GGG + tig0022009:70386-70405 Msa1396200:intron 35.0%
TCAAATTTCCCCTGTATGTA+TGG - tig0022009:70476-70495 None:intergenic 35.0%
ATCGAAGTGCAGCTTATATT+AGG + tig0022009:70606-70625 Msa1396200:CDS 35.0%
AGTGCAGCTTATATTAGGTT+AGG + tig0022009:70611-70630 Msa1396200:intron 35.0%
!! ATGGTTTTACTGAACTGCTT+TGG - tig0022009:70977-70996 None:intergenic 35.0%
TAATGCTCTTCTTCTGGTAA+GGG + tig0022009:71010-71029 Msa1396200:intron 35.0%
TTGTTCTCACTTGATCTCTT+TGG + tig0022009:71042-71061 Msa1396200:intron 35.0%
ATGAAATAGGTACAGACACA+AGG - tig0022009:71246-71265 None:intergenic 35.0%
TTGTGTCTGTACCTATTTCA+TGG + tig0022009:71245-71264 Msa1396200:intron 35.0%
TGTGTCTGTACCTATTTCAT+GGG + tig0022009:71246-71265 Msa1396200:intron 35.0%
AAGAGAATAATAAGGGGAAG+TGG + tig0022009:71326-71345 Msa1396200:intron 35.0%
AATAGTAGCTGCTAGCATTT+AGG + tig0022009:71394-71413 Msa1396200:intron 35.0%
ATAGTAGCTGCTAGCATTTA+GGG + tig0022009:71395-71414 Msa1396200:intron 35.0%
TTGTGTCATATGACCATACA+GGG - tig0022009:71495-71514 None:intergenic 35.0%
ATTGTGTCATATGACCATAC+AGG - tig0022009:71496-71515 None:intergenic 35.0%
AAACCCAAGAATCACTGTAA+AGG - tig0022009:71604-71623 None:intergenic 35.0%
TAAATGCTTGTGTATGAGCT+TGG + tig0022009:71793-71812 Msa1396200:intron 35.0%
GCAAAAAAGTAGACTGCAAT+GGG - tig0022009:71892-71911 None:intergenic 35.0%
AGCAAAAAAGTAGACTGCAA+TGG - tig0022009:71893-71912 None:intergenic 35.0%
! AAATTGCTTCACCCTGTTTT+TGG + tig0022009:71957-71976 Msa1396200:intron 35.0%
GAGAAACAAGAGTGAAGATA+AGG - tig0022009:72002-72021 None:intergenic 35.0%
!!! GACTTCAAGTTGATCCTTTT+AGG + tig0022009:72136-72155 Msa1396200:CDS 35.0%
GCACACTAAATGACTAGTAA+AGG - tig0022009:72251-72270 None:intergenic 35.0%
ATCATGTAGTAATTCCCTTC+GGG + tig0022009:72302-72321 Msa1396200:intron 35.0%
! ACAGTATCATCTAGTTCAAC+TGG + tig0022009:72345-72364 Msa1396200:CDS 35.0%
! CAGTATCATCTAGTTCAACT+GGG + tig0022009:72346-72365 Msa1396200:CDS 35.0%
ACCTAATTGAACATGTTCTG+GGG - tig0022009:72632-72651 None:intergenic 35.0%
CACCTAATTGAACATGTTCT+GGG - tig0022009:72633-72652 None:intergenic 35.0%
TCACCTAATTGAACATGTTC+TGG - tig0022009:72634-72653 None:intergenic 35.0%
! ATTGATTCAAGGCTACGATT+TGG - tig0022009:72696-72715 None:intergenic 35.0%
ACCATCCCACTATAAACTAT+GGG - tig0022009:72917-72936 None:intergenic 35.0%
AACCATCCCACTATAAACTA+TGG - tig0022009:72918-72937 None:intergenic 35.0%
AAGTCACAAATACCCATTGT+AGG - tig0022009:73087-73106 None:intergenic 35.0%
CATACAAAAGAACTTTCCAG+AGG + tig0022009:73241-73260 Msa1396200:CDS 35.0%
CAACATCCATGACAAAAAGA+GGG - tig0022009:73325-73344 None:intergenic 35.0%
ACAACATCCATGACAAAAAG+AGG - tig0022009:73326-73345 None:intergenic 35.0%
TTTAGTGGAAACCTTTGACA+GGG - tig0022009:73353-73372 None:intergenic 35.0%
ATTTAGTGGAAACCTTTGAC+AGG - tig0022009:73354-73373 None:intergenic 35.0%
TGAACCTCGTTATAGACTTA+TGG + tig0022009:73379-73398 Msa1396200:CDS 35.0%
GTTATAGACTTATGGTGAGT+TGG + tig0022009:73387-73406 Msa1396200:intron 35.0%
!! AGATATGTACAAGTACCGAA+AGG - tig0022009:73501-73520 None:intergenic 35.0%
! ATAGTTTTTCCGTTGTAAGC+TGG + tig0022009:73777-73796 Msa1396200:intron 35.0%
CAAAAATTACCAGACCTGAT+TGG + tig0022009:73875-73894 Msa1396200:intron 35.0%
CAAAATTGCAACATTTGGAG+AGG + tig0022009:73957-73976 Msa1396200:intron 35.0%
! CAGGTAAGAAGAATAATGGA+AGG + tig0022009:74197-74216 Msa1396200:intron 35.0%
! GAATAATGGAAGGCAATCAT+CGG + tig0022009:74207-74226 Msa1396200:CDS 35.0%
ATATTTCATGTGGGAAAGGA+GGG - tig0022009:74462-74481 None:intergenic 35.0%
GAAGATATTTCATGTGGGAA+AGG - tig0022009:74466-74485 None:intergenic 35.0%
TATATTCTACTGCATGGTGT+AGG + tig0022009:74511-74530 Msa1396200:intron 35.0%
TCTATATAAAAGCGACCATC+TGG - tig0022009:74549-74568 None:intergenic 35.0%
!!! AGATGGTCGCTTTTATATAG+AGG + tig0022009:74548-74567 Msa1396200:CDS 35.0%
!!! TGCTTTCCATTTTTCGAGAA+AGG + tig0022009:74648-74667 Msa1396200:intron 35.0%
!!! GCTTTCCATTTTTCGAGAAA+GGG + tig0022009:74649-74668 Msa1396200:intron 35.0%
AACTTCCCTTTCTCGAAAAA+TGG - tig0022009:74657-74676 None:intergenic 35.0%
TTATGTGCACTGTTCTCATA+TGG + tig0022009:74800-74819 Msa1396200:intron 35.0%
TTGGAAAAATCCAACCACAT+TGG + tig0022009:74823-74842 Msa1396200:intron 35.0%
TGTAACTGCATAAACCAATG+TGG - tig0022009:74840-74859 None:intergenic 35.0%
! GAGTTGTTCAAGTTAAGAGT+CGG + tig0022009:74952-74971 Msa1396200:intron 35.0%
!! TCACAGTTGGATTGGTTATT+TGG + tig0022009:75005-75024 Msa1396200:intron 35.0%
!! AGGAGCTGCAAAAGTATTAT+TGG - tig0022009:75041-75060 None:intergenic 35.0%
CATTTCTTTGTAAGCCGTAT+AGG + tig0022009:75400-75419 Msa1396200:intron 35.0%
! TGAATTCGGGTTATATTGAG+GGG - tig0022009:75515-75534 None:intergenic 35.0%
! TATCTTTTGCAGCTAATCCA+TGG - tig0022009:75702-75721 None:intergenic 35.0%
! CTTTGCCAAAATTTGAAACC+GGG + tig0022009:75758-75777 Msa1396200:intron 35.0%
CCCAAATTGAAAATCCTCAA+TGG + tig0022009:75810-75829 Msa1396200:intron 35.0%
TTAAGGGTCATCCAACTTAT+AGG - tig0022009:75860-75879 None:intergenic 35.0%
TTCTTGTAGAGAATTAGACG+AGG + tig0022009:76590-76609 Msa1396200:intron 35.0%
AGGAACGTTACCATTACTAT+TGG + tig0022009:76669-76688 Msa1396200:three_prime_UTR 35.0%
TTCATAAATGGCTGTTCATG+AGG + tig0022009:76745-76764 Msa1396200:three_prime_UTR 35.0%
CCCAATTGTTCTAATACACA+TGG + tig0022009:76795-76814 Msa1396200:three_prime_UTR 35.0%
!! GTGTATGAAATGAAGCATCG+AGG + tig0022009:67031-67050 Msa1396200:five_prime_UTR 40.0%
!! GTATGAAATGAAGCATCGAG+GGG + tig0022009:67033-67052 Msa1396200:five_prime_UTR 40.0%
GAAGAGAAGAAGGTTGGAAA+AGG - tig0022009:67070-67089 None:intergenic 40.0%
ATTTCCCATTCTACCCTCAA+TGG + tig0022009:67162-67181 Msa1396200:exon 40.0%
!!! ACTATCACGGTTTTTTGGAC+TGG + tig0022009:67307-67326 Msa1396200:intron 40.0%
!! TGTTTCCACAATCGCTTTTG+TGG + tig0022009:67735-67754 Msa1396200:intron 40.0%
GCACAAAACTAAACACGCAT+CGG - tig0022009:67786-67805 None:intergenic 40.0%
TCGAGTGACATAAGTGATTC+TGG + tig0022009:67833-67852 Msa1396200:intron 40.0%
GTATTCTATAACGCGTTGAG+TGG - tig0022009:68062-68081 None:intergenic 40.0%
TAAATGGCTTAGTGTCTGTG+CGG + tig0022009:68589-68608 Msa1396200:intron 40.0%
ACATGTGTAATGTCAGAAGG+AGG - tig0022009:68825-68844 None:intergenic 40.0%
CTCTCACAATCCTCAATTTC+TGG + tig0022009:69142-69161 Msa1396200:intron 40.0%
! TTCTCTGGGAGTCTAAGATT+TGG + tig0022009:69352-69371 Msa1396200:intron 40.0%
! TGGGAGTCTAAGATTTGGTT+TGG + tig0022009:69357-69376 Msa1396200:intron 40.0%
!! CTAAGATTTGGTTTGGTTGC+AGG + tig0022009:69364-69383 Msa1396200:intron 40.0%
!! TTGGTTTGGTTGCAGGATAA+TGG + tig0022009:69371-69390 Msa1396200:intron 40.0%
TTCCATTCTGTTGTCTCGAA+AGG - tig0022009:69462-69481 None:intergenic 40.0%
AATACACTTGACTGCATCCA+CGG - tig0022009:69930-69949 None:intergenic 40.0%
! TCTCAATTTTGGATGAGGGA+TGG + tig0022009:70390-70409 Msa1396200:intron 40.0%
TCTAGTGATCCAATCATCCT+CGG + tig0022009:70581-70600 Msa1396200:CDS 40.0%
CATCATCATCCTCAGAACAT+AGG + tig0022009:70785-70804 Msa1396200:CDS 40.0%
CTTGCCGAAGTATGTTCTAT+TGG + tig0022009:70835-70854 Msa1396200:intron 40.0%
TTCTTGACAACCATTTCAGC+TGG + tig0022009:70920-70939 Msa1396200:intron 40.0%
TCTTGACAACCATTTCAGCT+GGG + tig0022009:70921-70940 Msa1396200:intron 40.0%
!! GCATTAGCCTTCAAAAGGTA+TGG - tig0022009:70996-71015 None:intergenic 40.0%
!! GAAGAGCATTAGCCTTCAAA+AGG - tig0022009:71001-71020 None:intergenic 40.0%
CTAATGCTCTTCTTCTGGTA+AGG + tig0022009:71009-71028 Msa1396200:intron 40.0%
! GGGTTGATTTCCATTTAGCT+AGG + tig0022009:71128-71147 Msa1396200:intron 40.0%
AATAGGTACAGACACAAGGT+GGG - tig0022009:71242-71261 None:intergenic 40.0%
AAATAGGTACAGACACAAGG+TGG - tig0022009:71243-71262 None:intergenic 40.0%
GTGTCTGTACCTATTTCATG+GGG + tig0022009:71247-71266 Msa1396200:intron 40.0%
TCAAGAGTTCCCCATGAAAT+AGG - tig0022009:71259-71278 None:intergenic 40.0%
ATGGGGAACTCTTGAATGTA+GGG + tig0022009:71264-71283 Msa1396200:intron 40.0%
CTCTTGAATCACCATAACAC+AGG - tig0022009:71311-71330 None:intergenic 40.0%
TGTGTCATATGACCATACAG+GGG - tig0022009:71494-71513 None:intergenic 40.0%
AGCACCTTTACAGTGATTCT+TGG + tig0022009:71597-71616 Msa1396200:intron 40.0%
GCACCTTTACAGTGATTCTT+GGG + tig0022009:71598-71617 Msa1396200:intron 40.0%
CACAGTGGTAACCATTTGTT+TGG - tig0022009:71643-71662 None:intergenic 40.0%
AGGCTTCTTCATAATCACAG+TGG - tig0022009:71658-71677 None:intergenic 40.0%
GCGCAATACAAAGTACATCA+AGG - tig0022009:71819-71838 None:intergenic 40.0%
ATGGACAAAGGCCAAAAACA+GGG - tig0022009:71971-71990 None:intergenic 40.0%
GCAGTTAGAGAAATATGACG+TGG + tig0022009:72092-72111 Msa1396200:intron 40.0%
TAGAGAAATATGACGTGGCT+CGG + tig0022009:72097-72116 Msa1396200:CDS 40.0%
! TCTTTGAAGACATTCCCGAA+GGG - tig0022009:72319-72338 None:intergenic 40.0%
! TATCATCTAGTTCAACTGGG+AGG + tig0022009:72349-72368 Msa1396200:CDS 40.0%
CAGGTTCATACAGTATCTTC+AGG - tig0022009:72425-72444 None:intergenic 40.0%
CTATTTCAGTCAATGGATCG+TGG + tig0022009:72483-72502 Msa1396200:CDS 40.0%
! TCCCATAGTTTATAGTGGGA+TGG + tig0022009:72913-72932 Msa1396200:intron 40.0%
TCACACTAGCAGCAGTTAAT+AGG - tig0022009:73208-73227 None:intergenic 40.0%
TTCCAGAGGAATATGCTGAA+AGG + tig0022009:73255-73274 Msa1396200:CDS 40.0%
TTCCTTTCAGCATATTCCTC+TGG - tig0022009:73260-73279 None:intergenic 40.0%
! TATGCTCCCTCTTTTTGTCA+TGG + tig0022009:73316-73335 Msa1396200:CDS 40.0%
ATGTTGTCTTACCCTGTCAA+AGG + tig0022009:73339-73358 Msa1396200:CDS 40.0%
CTCACCATAAGTCTATAACG+AGG - tig0022009:73386-73405 None:intergenic 40.0%
!! ACTTATGGTGAGTTGGTCAA+TGG + tig0022009:73394-73413 Msa1396200:intron 40.0%
!! GAATGCTTAGAGAAGTGCTA+TGG - tig0022009:73573-73592 None:intergenic 40.0%
AAATCACACACAGTGACAGA+TGG - tig0022009:74310-74329 None:intergenic 40.0%
ACAGGTTCATTAGCAGAGTT+TGG + tig0022009:74365-74384 Msa1396200:CDS 40.0%
GAAATCACAGAGTAAGTGCT+TGG + tig0022009:74398-74417 Msa1396200:intron 40.0%
GATATTTCATGTGGGAAAGG+AGG - tig0022009:74463-74482 None:intergenic 40.0%
ACTGCATAAACCAATGTGGT+TGG - tig0022009:74836-74855 None:intergenic 40.0%
! ACATATTCCAGATGGTCTTG+AGG + tig0022009:74912-74931 Msa1396200:intron 40.0%
AAGAAATCCTCAAGACCATC+TGG - tig0022009:74922-74941 None:intergenic 40.0%
! AAGTTAAGAGTCGGTGTTCA+TGG + tig0022009:74961-74980 Msa1396200:intron 40.0%
! ACTTTTCGTCACAGTTGGAT+TGG + tig0022009:74997-75016 Msa1396200:intron 40.0%
ATGTACAGATTGAAGGTCGT+AGG + tig0022009:75158-75177 Msa1396200:intron 40.0%
ATCGTGTTGCAGAAGTTGAA+TGG + tig0022009:75307-75326 Msa1396200:CDS 40.0%
TGCAGAAGTTGAATGGATAC+AGG + tig0022009:75314-75333 Msa1396200:CDS 40.0%
TACCTCCTATGAAGCCTATA+CGG - tig0022009:75417-75436 None:intergenic 40.0%
CATAGGAGGTAGATTGTGAT+CGG + tig0022009:75426-75445 Msa1396200:intron 40.0%
! AGGTTCCCGGTTTCAAATTT+TGG - tig0022009:75766-75785 None:intergenic 40.0%
GAGAAACTCGTGAATGTTGA+AGG + tig0022009:76147-76166 Msa1396200:CDS 40.0%
AGGAGATCCAATCTTTCTGA+AGG - tig0022009:76340-76359 None:intergenic 40.0%
CTGTAGTATCTCTAATGCGT+AGG - tig0022009:76360-76379 None:intergenic 40.0%
ACGCATTAGAGATACTACAG+AGG + tig0022009:76360-76379 Msa1396200:CDS 40.0%
TCAATTATTACGAGGACGCT+AGG + tig0022009:76879-76898 Msa1396200:three_prime_UTR 40.0%
AACGTCCACAAAAGCGATTG+TGG - tig0022009:67743-67762 None:intergenic 45.0%
! ACGCATCGGAATCAAGGTTT+TGG - tig0022009:67772-67791 None:intergenic 45.0%
CTAAACACGCATCGGAATCA+AGG - tig0022009:67778-67797 None:intergenic 45.0%
GCGTTATAGAATACTCCCTC+CGG + tig0022009:68068-68087 Msa1396200:intron 45.0%
! GCACTGACACTTCTGATAGA+CGG + tig0022009:68621-68640 Msa1396200:intron 45.0%
!!! CACATGTTTTGGTGTCGTGT+CGG - tig0022009:68676-68695 None:intergenic 45.0%
TGTCCGTATCTGTGCTTCAT+AGG + tig0022009:68762-68781 Msa1396200:intron 45.0%
GGACCTATGAAGCACAGATA+CGG - tig0022009:68768-68787 None:intergenic 45.0%
!! TTGCAGGATAATGGACCAGA+AGG + tig0022009:69380-69399 Msa1396200:intron 45.0%
ATGGACCAGAAGGATTGTCA+TGG + tig0022009:69390-69409 Msa1396200:CDS 45.0%
TGGACCAGAAGGATTGTCAT+GGG + tig0022009:69391-69410 Msa1396200:CDS 45.0%
TCGAGACAACAGAATGGAAG+AGG + tig0022009:69463-69482 Msa1396200:CDS 45.0%
GGGAGGATACATGATTACTC+CGG - tig0022009:69698-69717 None:intergenic 45.0%
GTGGATGCAGTCAAGTGTAT+TGG + tig0022009:69929-69948 Msa1396200:intron 45.0%
ACTCAATGGCCTATGTTCTG+AGG - tig0022009:70797-70816 None:intergenic 45.0%
TCAGAACATAGGCCATTGAG+TGG + tig0022009:70796-70815 Msa1396200:CDS 45.0%
CAGAACATAGGCCATTGAGT+GGG + tig0022009:70797-70816 Msa1396200:CDS 45.0%
! CATACTTCGGCAAGTGTTGT+GGG - tig0022009:70829-70848 None:intergenic 45.0%
! ACATACTTCGGCAAGTGTTG+TGG - tig0022009:70830-70849 None:intergenic 45.0%
ACCATTTCAGCTGGGTTTGA+AGG + tig0022009:70929-70948 Msa1396200:intron 45.0%
TCCTTCAAACCCAGCTGAAA+TGG - tig0022009:70933-70952 None:intergenic 45.0%
GAAGGCTAATGCTCTTCTTC+TGG + tig0022009:71004-71023 Msa1396200:CDS 45.0%
TTAACCCATGTCGCTAGTTG+AGG + tig0022009:71208-71227 Msa1396200:intron 45.0%
TTCACCTCAACTAGCGACAT+GGG - tig0022009:71215-71234 None:intergenic 45.0%
ATTCACCTCAACTAGCGACA+TGG - tig0022009:71216-71235 None:intergenic 45.0%
CATGGGGAACTCTTGAATGT+AGG + tig0022009:71263-71282 Msa1396200:intron 45.0%
TCTTGAATGTAGGGCAAGTG+TGG + tig0022009:71273-71292 Msa1396200:intron 45.0%
CATGGACAAAGGCCAAAAAC+AGG - tig0022009:71972-71991 None:intergenic 45.0%
TGAAGATAAGGATCTGCGCA+TGG - tig0022009:71990-72009 None:intergenic 45.0%
AGAGAAATATGACGTGGCTC+GGG + tig0022009:72098-72117 Msa1396200:CDS 45.0%
GCTCGGGATGTTATTCTTTC+TGG + tig0022009:72114-72133 Msa1396200:CDS 45.0%
! CTCTTTGAAGACATTCCCGA+AGG - tig0022009:72320-72339 None:intergenic 45.0%
TCGGGAATGTCTTCAAAGAG+TGG + tig0022009:72320-72339 Msa1396200:CDS 45.0%
TCAAAGTCATCATTCCGCTC+TGG - tig0022009:72390-72409 None:intergenic 45.0%
GCAAAATGAATGTCCACAGG+GGG - tig0022009:72454-72473 None:intergenic 45.0%
GGCAAAATGAATGTCCACAG+GGG - tig0022009:72455-72474 None:intergenic 45.0%
CGGCAAAATGAATGTCCACA+GGG - tig0022009:72456-72475 None:intergenic 45.0%
ACGGCAAAATGAATGTCCAC+AGG - tig0022009:72457-72476 None:intergenic 45.0%
GCCCCAGAACATGTTCAATT+AGG + tig0022009:72628-72647 Msa1396200:CDS 45.0%
!! AAAGTGCTTAAAGAGTGCCC+TGG + tig0022009:72873-72892 Msa1396200:intron 45.0%
!! AAGTGCTTAAAGAGTGCCCT+GGG + tig0022009:72874-72893 Msa1396200:intron 45.0%
!! GCTTAGAGAAGTGCTATGGA+CGG - tig0022009:73569-73588 None:intergenic 45.0%
TTTCTTGGGTTCCTGACACA+TGG - tig0022009:73696-73715 None:intergenic 45.0%
TACCAGACCTGATTGGATTC+TGG + tig0022009:73882-73901 Msa1396200:intron 45.0%
TTCCAGAATCCAATCAGGTC+TGG - tig0022009:73887-73906 None:intergenic 45.0%
AATGGAAGGCAATCATCGGA+TGG + tig0022009:74211-74230 Msa1396200:CDS 45.0%
ATGGAAGGCAATCATCGGAT+GGG + tig0022009:74212-74231 Msa1396200:CDS 45.0%
CACACAGTGACAGATGGATA+TGG - tig0022009:74304-74323 None:intergenic 45.0%
TAAAAGCGACCATCTGGAAG+TGG - tig0022009:74543-74562 None:intergenic 45.0%
GTGCACTGTTCTCATATGGT+TGG + tig0022009:74804-74823 Msa1396200:intron 45.0%
ATTTCGCAACCTCCGTTCTT+GGG + tig0022009:75183-75202 Msa1396200:CDS 45.0%
TCCGTTCTTGGGATCAAGAT+GGG + tig0022009:75194-75213 Msa1396200:CDS 45.0%
ACCCATCTTGATCCCAAGAA+CGG - tig0022009:75198-75217 None:intergenic 45.0%
AAGATGGGTGAGTTGTCTCT+CGG + tig0022009:75209-75228 Msa1396200:intron 45.0%
!! TCGCTGCAATTTGTTGTGTG+TGG + tig0022009:75249-75268 Msa1396200:intron 45.0%
TCTCTTTCCTTTGTCCCTTC+TGG - tig0022009:75351-75370 None:intergenic 45.0%
AGAAGGGACAAAGGAAAGAG+AGG + tig0022009:75350-75369 Msa1396200:CDS 45.0%
GTAAGCCGTATAGGCTTCAT+AGG + tig0022009:75409-75428 Msa1396200:intron 45.0%
!! GAAAGTGCTCGAACATGGAT+AGG + tig0022009:75991-76010 Msa1396200:CDS 45.0%
GCTAAAGAAGCAGCAAGACA+AGG + tig0022009:76018-76037 Msa1396200:CDS 45.0%
! ACCCAAAAACTAAAGCGCTC+GGG - tig0022009:76195-76214 None:intergenic 45.0%
! CACCCAAAAACTAAAGCGCT+CGG - tig0022009:76196-76215 None:intergenic 45.0%
TCGTAGGCCTTCAGAAAGAT+TGG + tig0022009:76330-76349 Msa1396200:CDS 45.0%
CCTCTGCTCGAAGAAATATC+AGG - tig0022009:76616-76635 None:intergenic 45.0%
CCTGATATTTCTTCGAGCAG+AGG + tig0022009:76613-76632 Msa1396200:CDS 45.0%
TTTCTTCGAGCAGAGGAACA+AGG + tig0022009:76620-76639 Msa1396200:CDS 45.0%
!! TAATCATATTTATATATAAA+TGG - tig0022009:69548-69567 None:intergenic 5.0%
!! TTTAATTAATATATTCTATT+AGG - tig0022009:71764-71783 None:intergenic 5.0%
!! ATATTGAAATATTATAAAAA+AGG - tig0022009:75098-75117 None:intergenic 5.0%
GTGGCCATTGAGGGTAGAAT+GGG - tig0022009:67169-67188 None:intergenic 50.0%
AGTGGCCATTGAGGGTAGAA+TGG - tig0022009:67170-67189 None:intergenic 50.0%
AGAATCGGAAGGAGGTTGAG+TGG - tig0022009:67188-67207 None:intergenic 50.0%
! TTGAGACCGGAGGGAGTATA+TGG + tig0022009:68212-68231 Msa1396200:intron 50.0%
!! CAGAAGTGTCAGTGCTACTG+AGG - tig0022009:68616-68635 None:intergenic 50.0%
GTGTCCCATGACAATCCTTC+TGG - tig0022009:69398-69417 None:intergenic 50.0%
GGCCTTTCGAGACAACAGAA+TGG + tig0022009:69457-69476 Msa1396200:CDS 50.0%
GCGACAACAGTATTGTTCCG+TGG + tig0022009:69910-69929 Msa1396200:intron 50.0%
CTTCGATTGCCGAGGATGAT+TGG - tig0022009:70593-70612 None:intergenic 50.0%
GAAGGATGCTGCAAAGCTTG+TGG + tig0022009:70947-70966 Msa1396200:CDS 50.0%
ATGTAGGGCAAGTGTGGAGT+TGG + tig0022009:71279-71298 Msa1396200:intron 50.0%
GTTGGACATGGCCTGTGTTA+TGG + tig0022009:71297-71316 Msa1396200:intron 50.0%
ACAGTGCAAAGTAGCGAGTG+TGG - tig0022009:71924-71943 None:intergenic 50.0%
AAGGATCTGCGCATGGACAA+AGG - tig0022009:71983-72002 None:intergenic 50.0%
GTACACATGCACAACCAGAG+CGG + tig0022009:72373-72392 Msa1396200:CDS 50.0%
GCAGAACTGTCCTGCACAAT+GGG - tig0022009:72602-72621 None:intergenic 50.0%
AGCAGAACTGTCCTGCACAA+TGG - tig0022009:72603-72622 None:intergenic 50.0%
!! AGTGCTTAAAGAGTGCCCTG+GGG + tig0022009:72875-72894 Msa1396200:intron 50.0%
TATGTTAACGAGTGCCCCCA+GGG - tig0022009:72893-72912 None:intergenic 50.0%
ATATGTTAACGAGTGCCCCC+AGG - tig0022009:72894-72913 None:intergenic 50.0%
GCAACATTTGGAGAGGATCG+AGG + tig0022009:73964-73983 Msa1396200:intron 50.0%
ATTTGGAGAGGATCGAGGAC+TGG + tig0022009:73969-73988 Msa1396200:intron 50.0%
AGGCAATCATCGGATGGGAA+TGG + tig0022009:74217-74236 Msa1396200:CDS 50.0%
AGCAGAGTTTGGCTGTGAAG+TGG + tig0022009:74376-74395 Msa1396200:CDS 50.0%
GATTTCGCAACCTCCGTTCT+TGG + tig0022009:75182-75201 Msa1396200:CDS 50.0%
CATCTTGATCCCAAGAACGG+AGG - tig0022009:75195-75214 None:intergenic 50.0%
CTCCGTTCTTGGGATCAAGA+TGG + tig0022009:75193-75212 Msa1396200:CDS 50.0%
AGGATGTTATGCCGCCAGAA+GGG + tig0022009:75334-75353 Msa1396200:CDS 50.0%
CTTTCCTTTGTCCCTTCTGG+CGG - tig0022009:75348-75367 None:intergenic 50.0%
AGCCGTATAGGCTTCATAGG+AGG + tig0022009:75412-75431 Msa1396200:intron 50.0%
!! CAGCAGAAAGTGCTCGAACA+TGG + tig0022009:75986-76005 Msa1396200:CDS 50.0%
!!! ACCCCGAGCGCTTTAGTTTT+TGG + tig0022009:76190-76209 Msa1396200:CDS 50.0%
! CCCAAAAACTAAAGCGCTCG+GGG - tig0022009:76194-76213 None:intergenic 50.0%
!!! CCCCGAGCGCTTTAGTTTTT+GGG + tig0022009:76191-76210 Msa1396200:CDS 50.0%
TGAAGGCCTACGATTCGAGA+GGG - tig0022009:76323-76342 None:intergenic 50.0%
GGAGGTTGAGTGGCCATTGA+GGG - tig0022009:67178-67197 None:intergenic 55.0%
AGGAGGTTGAGTGGCCATTG+AGG - tig0022009:67179-67198 None:intergenic 55.0%
ACGTCGAGAGAATCGGAAGG+AGG - tig0022009:67196-67215 None:intergenic 55.0%
TCGACGTCGAGAGAATCGGA+AGG - tig0022009:67199-67218 None:intergenic 55.0%
GTCGTCGACGTCGAGAGAAT+CGG - tig0022009:67203-67222 None:intergenic 55.0%
! CGACGTCGACGACTACGTTT+TGG + tig0022009:67210-67229 Msa1396200:CDS 55.0%
CTTCTGATAGACGGCGTGTC+TGG + tig0022009:68630-68649 Msa1396200:intron 55.0%
CCACACTAAACCGTCGACAC+TGG - tig0022009:68735-68754 None:intergenic 55.0%
!! CCAGTGTCGACGGTTTAGTG+TGG + tig0022009:68732-68751 Msa1396200:intron 55.0%
CGACGGTTTAGTGTGGTGTC+AGG + tig0022009:68739-68758 Msa1396200:intron 55.0%
TCATAGGTCCGCACTCGCAA+CGG + tig0022009:68778-68797 Msa1396200:intron 55.0%
AAGCTGCACTTCGATTGCCG+AGG - tig0022009:70601-70620 None:intergenic 55.0%
GTGGGATCAAGCCCACTCAA+TGG - tig0022009:70811-70830 None:intergenic 55.0%
GGCAAGTGTGGAGTTGGACA+TGG + tig0022009:71285-71304 Msa1396200:intron 55.0%
GGAACAGATGCCCATTGTGC+AGG + tig0022009:72589-72608 Msa1396200:CDS 55.0%
! GTCTTGTTATCGACTGCCCC+CGG + tig0022009:72744-72763 Msa1396200:intron 55.0%
! TCTTGTTATCGACTGCCCCC+GGG + tig0022009:72745-72764 Msa1396200:intron 55.0%
!! ATCCTTAAAGAGTGCCCCGG+GGG - tig0022009:72763-72782 None:intergenic 55.0%
!! GATCCTTAAAGAGTGCCCCG+GGG - tig0022009:72764-72783 None:intergenic 55.0%
!! GGATCCTTAAAGAGTGCCCC+GGG - tig0022009:72765-72784 None:intergenic 55.0%
!! GGGATCCTTAAAGAGTGCCC+CGG - tig0022009:72766-72785 None:intergenic 55.0%
!! GTGCTTAAAGAGTGCCCTGG+GGG + tig0022009:72876-72895 Msa1396200:intron 55.0%
AGGTGTGAGCCACTTCCAGA+TGG + tig0022009:74531-74550 Msa1396200:intron 55.0%
CAGGATGTTATGCCGCCAGA+AGG + tig0022009:75333-75352 Msa1396200:CDS 55.0%
TATGCCGCCAGAAGGGACAA+AGG + tig0022009:75341-75360 Msa1396200:CDS 55.0%
CGCTCGGGGTCTCTTAATGA+GGG - tig0022009:76180-76199 None:intergenic 55.0%
TCGCTACCCTCTCGAATCGT+AGG + tig0022009:76314-76333 Msa1396200:CDS 55.0%
CTGAAGGCCTACGATTCGAG+AGG - tig0022009:76324-76343 None:intergenic 55.0%
GACACTCTCCGTTGCGAGTG+CGG - tig0022009:68789-68808 None:intergenic 60.0%
GAACCTGTCACAACCCCCTG+TGG + tig0022009:72438-72457 Msa1396200:CDS 60.0%
TGTCCACAGGGGGTTGTGAC+AGG - tig0022009:72444-72463 None:intergenic 60.0%
! CTTGTTATCGACTGCCCCCG+GGG + tig0022009:72746-72765 Msa1396200:intron 60.0%
GCGCTCGGGGTCTCTTAATG+AGG - tig0022009:76181-76200 None:intergenic 60.0%
! TGCCCCCGGGGCACTCTTTA+AGG + tig0022009:72758-72777 Msa1396200:intron 65.0%
Chromosome Type Strat End Strand Name
tig0022009 gene 66972 76903 66972 ID=Msa1396200;Name=Msa1396200
tig0022009 mRNA 66972 76903 66972 ID=Msa1396200-mRNA-1;Parent=Msa1396200;Name=Msa1396200-mRNA-1;_AED=0.17;_eAED=0.17;_QI=209|1|1|1|0.88|0.94|18|245|480
tig0022009 exon 66972 67231 66972 ID=Msa1396200-mRNA-1:exon:15362;Parent=Msa1396200-mRNA-1
tig0022009 exon 69386 69484 69386 ID=Msa1396200-mRNA-1:exon:15363;Parent=Msa1396200-mRNA-1
tig0022009 exon 70545 70627 70545 ID=Msa1396200-mRNA-1:exon:15364;Parent=Msa1396200-mRNA-1
tig0022009 exon 70759 70843 70759 ID=Msa1396200-mRNA-1:exon:15365;Parent=Msa1396200-mRNA-1
tig0022009 exon 70939 71025 70939 ID=Msa1396200-mRNA-1:exon:15366;Parent=Msa1396200-mRNA-1
tig0022009 exon 72096 72157 72096 ID=Msa1396200-mRNA-1:exon:15367;Parent=Msa1396200-mRNA-1
tig0022009 exon 72311 72504 72311 ID=Msa1396200-mRNA-1:exon:15368;Parent=Msa1396200-mRNA-1
tig0022009 exon 72589 72649 72589 ID=Msa1396200-mRNA-1:exon:15369;Parent=Msa1396200-mRNA-1
tig0022009 exon 73223 73400 73223 ID=Msa1396200-mRNA-1:exon:15370;Parent=Msa1396200-mRNA-1
tig0022009 exon 74200 74238 74200 ID=Msa1396200-mRNA-1:exon:15371;Parent=Msa1396200-mRNA-1
tig0022009 exon 74347 74408 74347 ID=Msa1396200-mRNA-1:exon:15372;Parent=Msa1396200-mRNA-1
tig0022009 exon 74533 74569 74533 ID=Msa1396200-mRNA-1:exon:15373;Parent=Msa1396200-mRNA-1
tig0022009 exon 75166 75215 75166 ID=Msa1396200-mRNA-1:exon:15374;Parent=Msa1396200-mRNA-1
tig0022009 exon 75305 75374 75305 ID=Msa1396200-mRNA-1:exon:15375;Parent=Msa1396200-mRNA-1
tig0022009 exon 75964 76039 75964 ID=Msa1396200-mRNA-1:exon:15376;Parent=Msa1396200-mRNA-1
tig0022009 exon 76133 76212 76133 ID=Msa1396200-mRNA-1:exon:15377;Parent=Msa1396200-mRNA-1
tig0022009 exon 76313 76381 76313 ID=Msa1396200-mRNA-1:exon:15378;Parent=Msa1396200-mRNA-1
tig0022009 exon 76599 76903 76599 ID=Msa1396200-mRNA-1:exon:15379;Parent=Msa1396200-mRNA-1
tig0022009 five_prime_UTR 66972 67180 66972 ID=Msa1396200-mRNA-1:five_prime_utr;Parent=Msa1396200-mRNA-1
tig0022009 CDS 67181 67231 67181 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 69386 69484 69386 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 70545 70627 70545 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 70759 70843 70759 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 70939 71025 70939 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 72096 72157 72096 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 72311 72504 72311 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 72589 72649 72589 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 73223 73400 73223 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 74200 74238 74200 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 74347 74408 74347 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 74533 74569 74533 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 75166 75215 75166 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 75305 75374 75305 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 75964 76039 75964 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 76133 76212 76133 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 76313 76381 76313 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 CDS 76599 76658 76599 ID=Msa1396200-mRNA-1:cds;Parent=Msa1396200-mRNA-1
tig0022009 three_prime_UTR 76659 76903 76659 ID=Msa1396200-mRNA-1:three_prime_utr;Parent=Msa1396200-mRNA-1
Gene Sequence

>Msa1396200

ATGGCCACTCAACCTCCTTCCGATTCTCTCGACGTCGACGACTACGTTTTGGATAATGGACCAGAAGGATTGTCATGGGACACATTTCATTATGTTTACGAGCTTGTACAAAAGGGAAATTTGGCCTTTCGAGACAACAGAATGGAAGAGGCAATCAACTTTTACTCAAGAGCCAATAACATCAAATCTAGTGATCCAATCATCCTCGGCAATCGAAGTGCAGCTTATATTAGGATTAGCCAATATTTAATGCATAGATCATCATCATCCTCAGAACATAGGCCATTGAGTGGGCTTGATCCCACAACACTTGCCGAACTGGGTTTGAAGGATGCTGCAAAGCTTGTGGAACTCCAAAGCAGTTCAGTAAAACCATACCTTTTGAAGGCTAATGCTCTTCTTCTGTTAGAGAAATATGACGTGGCTCGGGATGTTATTCTTTCTGGACTTCAAGTTGATCCTTTTAGTAATTCCCTTCGGGAATGTCTTCAAAGAGTGGAAACAGTATCATCTAGTTCAACTGGGAGGAGTACACATGCACAACCAGAGCGGAATGATGACTTTGATTGCACTCTCTGCCTGAAGATACTGTATGAACCTGTCACAACCCCCTGTGGACATTCATTTTGCCGTTCATGTCTATTTCAGTCAATGGATCGTGGGAACAGATGCCCATTGTGCAGGACAGTTCTGCTCATTAGCCCCAGAACATGTTCAATTAGTGTGACATTGAAGAGCATCATACAAAAGAACTTTCCAGAGGAATATGCTGAAAGGAAGCAAGAGAATGACAGTTTAGTCAACATTGGTGTAGATATGCTCCCTCTTTTTGTCATGGATGTTGTCTTACCCTGTCAAAGGTTTCCACTAAATATATTTGAACCTCGTTATAGACTTATGGTAAGAAGAATAATGGAAGGCAATCATCGGATGGGAATGGTTATAATAGATGCTTCAACAGGTTCATTAGCAGAGTTTGGCTGTGAAGTGGAAATCACAGAGTGTGAGCCACTTCCAGATGGTCGCTTTTATATAGAGATTGAAGGTCGTAGGAGATTTCGCAACCTCCGTTCTTGGGATCAAGATGGATATCGTGTTGCAGAAGTTGAATGGATACAGGATGTTATGCCGCCAGAAGGGACAAAGGAAAGAGAGGATTTACTGGAATTGACGCATAATGCAGCAGAAAGTGCTCGAACATGGATAGGAAGAGCTAAAGAAGCAGCAAGACAAGATCAAAGAAGATTAGAGAAACTCGTGAATGTTGAAGGATTGATACCCTCATTAAGAGACCCCGAGCGCTTTAGTTTTTGGCTCGCTACCCTCTCGAATCGTAGGCCTTCAGAAAGATTGGATCTCCTACGCATTAGAGATACTACAGAGAGAATTAGACGAGGCCTGATATTTCTTCGAGCAGAGGAACAAGGATGCAGAATTCAGTAA

Protein sequence

>Msa1396200

MATQPPSDSLDVDDYVLDNGPEGLSWDTFHYVYELVQKGNLAFRDNRMEEAINFYSRANNIKSSDPIILGNRSAAYIRISQYLMHRSSSSSEHRPLSGLDPTTLAELGLKDAAKLVELQSSSVKPYLLKANALLLLEKYDVARDVILSGLQVDPFSNSLRECLQRVETVSSSSTGRSTHAQPERNDDFDCTLCLKILYEPVTTPCGHSFCRSCLFQSMDRGNRCPLCRTVLLISPRTCSISVTLKSIIQKNFPEEYAERKQENDSLVNIGVDMLPLFVMDVVLPCQRFPLNIFEPRYRLMVRRIMEGNHRMGMVIIDASTGSLAEFGCEVEITECEPLPDGRFYIEIEGRRRFRNLRSWDQDGYRVAEVEWIQDVMPPEGTKEREDLLELTHNAAESARTWIGRAKEAARQDQRRLEKLVNVEGLIPSLRDPERFSFWLATLSNRRPSERLDLLRIRDTTERIRRGLIFLRAEEQGCRIQ*