AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1072250


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1072250 MtrunA17_Chr7g0254261 95.068 365 9 2 1 365 1 356 0.0 701
Msa1072250 MtrunA17_Chr6g0460671 49.695 328 131 7 34 361 52 345 2.03e-80 249
Msa1072250 MtrunA17_Chr4g0042501 75.000 140 35 0 64 203 78 217 1.26e-74 237
Msa1072250 MtrunA17_Chr5g0417621 42.236 322 137 10 84 363 127 441 7.98e-71 228
Msa1072250 MtrunA17_Chr3g0125801 42.295 305 128 7 86 365 11 292 4.79e-62 200
Msa1072250 MtrunA17_Chr6g0480581 73.214 112 30 0 88 199 1 112 1.09e-60 195
Msa1072250 MtrunA17_Chr6g0460661 57.143 119 51 0 90 208 15 133 5.38e-46 154
Msa1072250 MtrunA17_Chr4g0008551 59.406 101 41 0 91 191 38 138 5.79e-40 144
Msa1072250 MtrunA17_Chr5g0401731 44.138 145 72 2 91 235 15 150 1.16e-37 137
Msa1072250 MtrunA17_Chr4g0053431 55.446 101 45 0 91 191 5 105 4.04e-37 135
Msa1072250 MtrunA17_Chr3g0133601 56.436 101 44 0 91 191 37 137 1.54e-36 132
Msa1072250 MtrunA17_Chr6g0454921 50.495 101 50 0 91 191 15 115 2.48e-34 125
Msa1072250 MtrunA17_Chr1g0157731 44.444 135 70 2 61 191 58 191 1.67e-32 129
Msa1072250 MtrunA17_Chr3g0139671 42.963 135 72 2 61 191 52 185 2.79e-32 128
Msa1072250 MtrunA17_Chr7g0238631 53.465 101 47 0 91 191 113 213 9.67e-32 125
Msa1072250 MtrunA17_Chr5g0429661 41.379 174 97 2 86 258 117 286 3.27e-31 121
Msa1072250 MtrunA17_Chr5g0437321 52.632 95 45 0 91 185 19 113 3.90e-31 119
Msa1072250 MtrunA17_Chr3g0117511 38.068 176 102 4 91 262 183 355 7.23e-29 116
Msa1072250 MtrunA17_Chr7g0228401 31.154 260 154 6 50 290 236 489 7.54e-27 111
Msa1072250 MtrunA17_Chr4g0058991 31.746 189 118 2 28 216 157 334 1.80e-26 109
Msa1072250 MtrunA17_Chr3g0103281 46.078 102 54 1 91 191 14 115 2.50e-26 107
Msa1072250 MtrunA17_Chr5g0397841 52.174 92 44 0 94 185 113 204 3.19e-26 109
Msa1072250 MtrunA17_Chr4g0022901 48.039 102 52 1 91 191 15 116 3.90e-26 105
Msa1072250 MtrunA17_Chr3g0099131 44.545 110 60 1 91 199 43 152 6.20e-26 108
Msa1072250 MtrunA17_Chr4g0022911 48.039 102 52 1 91 191 15 116 1.22e-25 104
Msa1072250 MtrunA17_Chr7g0228531 49.505 101 50 1 91 191 220 319 2.01e-25 106
Msa1072250 MtrunA17_Chr4g0022931 37.500 144 87 2 91 231 15 158 3.11e-25 103
Msa1072250 MtrunA17_Chr2g0323351 47.059 102 51 2 91 190 14 114 3.38e-25 102
Msa1072250 MtrunA17_Chr1g0203411 43.810 105 58 1 91 194 14 118 4.64e-25 103
Msa1072250 MtrunA17_Chr1g0203441 46.602 103 52 2 91 191 15 116 9.08e-25 102
Msa1072250 MtrunA17_Chr4g0055981 33.918 171 103 5 90 256 56 220 1.03e-24 100
Msa1072250 MtrunA17_Chr5g0417821 45.098 102 55 1 91 191 9 110 1.41e-24 101
Msa1072250 MtrunA17_Chr8g0360111 48.000 100 51 1 91 189 27 126 2.14e-24 100
Msa1072250 MtrunA17_Chr8g0354661 40.602 133 76 2 68 199 18 148 2.81e-24 103
Msa1072250 MtrunA17_Chr2g0311221 48.454 97 49 1 91 186 16 112 3.32e-24 101
Msa1072250 MtrunA17_Chr5g0434911 44.118 102 56 1 91 191 23 124 4.14e-24 100
Msa1072250 MtrunA17_Chr7g0220341 40.496 121 69 1 74 191 10 130 8.99e-24 99.4
Msa1072250 MtrunA17_Chr6g0470971 42.718 103 56 2 91 191 16 117 9.22e-24 99.4
Msa1072250 MtrunA17_Chr3g0080861 42.727 110 62 1 91 199 39 148 1.12e-23 102
Msa1072250 MtrunA17_Chr3g0115821 43.103 116 58 3 83 191 1 115 1.15e-23 100
Msa1072250 MtrunA17_Chr2g0322521 45.238 126 62 3 76 199 20 140 1.74e-23 100
Msa1072250 MtrunA17_Chr1g0187761 31.111 225 111 6 91 273 14 236 1.97e-23 97.8
Msa1072250 MtrunA17_Chr4g0048511 46.078 102 54 1 91 191 15 116 1.98e-23 99.8
Msa1072250 MtrunA17_Chr5g0434841 44.118 102 56 1 91 191 22 123 3.01e-23 98.6
Msa1072250 MtrunA17_Chr5g0434831 43.137 102 57 1 91 191 9 110 3.24e-23 95.5
Msa1072250 MtrunA17_Chr7g0228991 43.137 102 57 1 91 191 31 132 4.01e-23 97.4
Msa1072250 MtrunA17_Chr1g0193801 39.344 122 73 1 85 205 8 129 4.26e-23 99.4
Msa1072250 MtrunA17_Chr1g0167691 43.137 102 57 1 91 191 14 115 4.32e-23 97.1
Msa1072250 MtrunA17_Chr7g0274581 45.098 102 55 1 91 191 14 115 5.88e-23 95.5
Msa1072250 MtrunA17_Chr7g0270891 38.525 122 74 1 85 205 8 129 6.75e-23 98.6
Msa1072250 MtrunA17_Chr1g0192411 36.765 136 85 1 91 225 14 149 7.14e-23 99.0
Msa1072250 MtrunA17_Chr5g0434931 42.157 102 58 1 91 191 37 138 9.79e-23 96.7
Msa1072250 MtrunA17_Chr4g0022891 30.942 223 122 7 91 287 14 230 1.05e-22 95.5
Msa1072250 MtrunA17_Chr4g0058631 35.938 128 81 1 91 217 14 141 1.50e-22 97.4
Msa1072250 MtrunA17_Chr1g0154031 43.636 110 61 1 91 199 78 187 1.51e-22 98.2
Msa1072250 MtrunA17_Chr2g0281071 44.118 102 56 1 91 191 15 116 1.69e-22 97.1
Msa1072250 MtrunA17_Chr2g0323411 46.078 102 54 1 91 191 14 115 1.70e-22 96.7
Msa1072250 MtrunA17_Chr3g0117091 39.535 129 73 3 91 215 14 141 1.94e-22 97.1
Msa1072250 MtrunA17_Chr1g0193371 38.211 123 73 2 85 205 8 129 2.48e-22 97.1
Msa1072250 MtrunA17_Chr6g0452271 43.137 102 57 1 91 191 14 115 2.55e-22 96.3
Msa1072250 MtrunA17_Chr2g0309911 42.718 103 56 2 91 191 13 114 2.73e-22 95.9
Msa1072250 MtrunA17_Chr7g0228481 48.958 96 48 1 91 186 220 314 3.10e-22 97.4
Msa1072250 MtrunA17_Chr1g0211161 38.983 118 69 2 91 206 15 131 6.09e-22 93.2
Msa1072250 MtrunA17_Chr4g0037141 32.934 167 102 4 83 240 1 166 6.50e-22 94.4
Msa1072250 MtrunA17_Chr5g0435101 41.748 103 59 1 90 191 12 114 9.41e-22 92.0
Msa1072250 MtrunA17_Chr8g0342541 40.517 116 61 3 83 191 1 115 9.62e-22 94.7
Msa1072250 MtrunA17_Chr5g0397231 42.593 108 56 2 83 184 1 108 1.12e-21 94.7
Msa1072250 MtrunA17_Chr1g0209661 40.000 105 62 1 91 194 29 133 1.48e-21 94.0
Msa1072250 MtrunA17_Chr5g0400821 41.071 112 59 3 91 195 14 125 1.60e-21 93.6
Msa1072250 MtrunA17_Chr4g0032401 42.157 102 58 1 91 191 19 120 1.69e-21 94.0
Msa1072250 MtrunA17_Chr4g0070611 39.130 115 64 2 83 191 1 115 1.83e-21 93.6
Msa1072250 MtrunA17_Chr2g0328771 43.689 103 55 2 91 191 22 123 1.84e-21 93.6
Msa1072250 MtrunA17_Chr2g0327821 34.615 156 90 4 91 244 8 153 1.86e-21 92.0
Msa1072250 MtrunA17_Chr4g0030881 40.678 118 59 3 87 195 5 120 1.91e-21 92.4
Msa1072250 MtrunA17_Chr2g0330041 43.119 109 54 3 83 184 1 108 1.99e-21 94.7
Msa1072250 MtrunA17_Chr1g0180391 37.162 148 80 4 91 230 21 163 2.10e-21 91.7
Msa1072250 MtrunA17_Chr7g0228891 42.718 103 56 2 91 191 14 115 3.03e-21 92.0
Msa1072250 MtrunA17_Chr4g0070641 39.130 115 64 2 83 191 1 115 3.15e-21 89.7
Msa1072250 MtrunA17_Chr5g0410961 39.130 115 64 2 83 191 1 115 3.39e-21 93.2
Msa1072250 MtrunA17_Chr5g0395281 43.689 103 55 2 91 191 14 115 3.40e-21 92.8
Msa1072250 MtrunA17_Chr8g0385321 38.261 115 65 2 83 191 1 115 4.18e-21 92.4
Msa1072250 MtrunA17_Chr7g0217221 40.196 102 60 1 91 191 14 115 4.47e-21 91.7
Msa1072250 MtrunA17_Chr8g0342521 39.655 116 62 3 83 191 1 115 4.61e-21 92.8
Msa1072250 MtrunA17_Chr1g0151941 42.718 103 57 2 91 191 14 116 4.69e-21 91.3
Msa1072250 MtrunA17_Chr7g0261281 42.718 103 56 2 91 191 14 115 4.78e-21 91.7
Msa1072250 MtrunA17_Chr7g0271241 42.718 103 56 2 85 185 8 109 5.38e-21 93.2
Msa1072250 MtrunA17_Chr1g0177901 49.398 83 42 0 102 184 5 87 6.10e-21 89.7
Msa1072250 MtrunA17_Chr5g0441131 40.566 106 60 3 91 194 11 115 6.29e-21 89.4
Msa1072250 MtrunA17_Chr8g0387421 40.566 106 62 1 91 195 14 119 6.37e-21 92.0
Msa1072250 MtrunA17_Chr3g0135311 38.655 119 67 3 91 203 14 132 8.01e-21 92.4
Msa1072250 MtrunA17_Chr4g0028311 43.269 104 55 3 91 191 14 116 8.41e-21 92.0
Msa1072250 MtrunA17_Chr8g0342481 41.026 117 60 4 83 191 1 116 1.06e-20 92.4
Msa1072250 MtrunA17_Chr1g0194301 32.663 199 114 8 91 273 35 229 1.31e-20 90.5
Msa1072250 MtrunA17_Chr8g0334881 45.714 105 55 2 91 193 12 116 1.35e-20 91.3
Msa1072250 MtrunA17_Chr4g0022881 41.237 97 54 2 91 185 14 109 1.39e-20 89.4
Msa1072250 MtrunA17_Chr1g0167661 41.176 102 59 1 91 191 14 115 1.41e-20 89.7
Msa1072250 MtrunA17_Chr7g0275911 36.134 119 70 2 83 195 1 119 1.51e-20 89.7
Msa1072250 MtrunA17_Chr7g0240821 43.000 100 54 2 94 191 6 104 1.61e-20 89.4
Msa1072250 MtrunA17_Chr1g0186061 41.905 105 58 2 91 193 22 125 1.70e-20 89.7
Msa1072250 MtrunA17_Chr8g0346561 36.220 127 73 3 76 198 3 125 1.97e-20 90.5
Msa1072250 MtrunA17_Chr8g0343831 37.500 112 69 1 87 197 6 117 2.00e-20 89.4
Msa1072250 MtrunA17_Chr3g0088461 42.727 110 61 2 83 191 17 125 2.04e-20 90.9
Msa1072250 MtrunA17_Chr3g0121241 37.069 116 72 1 91 205 44 159 2.26e-20 90.5
Msa1072250 MtrunA17_Chr4g0042671 41.026 117 64 2 76 191 3 115 2.61e-20 91.7
Msa1072250 MtrunA17_Chr3g0131121 31.818 176 92 6 83 250 1 156 2.66e-20 90.1
Msa1072250 MtrunA17_Chr4g0039971 41.748 103 57 2 91 191 15 116 2.69e-20 90.9
Msa1072250 MtrunA17_Chr4g0054391 44.330 97 52 2 91 185 14 110 2.77e-20 89.7
Msa1072250 MtrunA17_Chr7g0228231 26.882 186 122 2 91 275 16 188 2.96e-20 87.8
Msa1072250 MtrunA17_Chr7g0233061 41.379 116 57 3 71 186 169 273 3.12e-20 90.9
Msa1072250 MtrunA17_Chr1g0152011 40.777 103 59 2 91 191 14 116 3.60e-20 90.5
Msa1072250 MtrunA17_Chr6g0453211 41.237 97 56 1 91 186 14 110 4.25e-20 89.7
Msa1072250 MtrunA17_Chr2g0327351 44.898 98 52 2 91 186 14 111 4.27e-20 89.7
Msa1072250 MtrunA17_Chr7g0264641 39.655 116 63 3 83 191 1 116 4.38e-20 89.0
Msa1072250 MtrunA17_Chr6g0453471 41.026 117 64 2 76 191 3 115 4.58e-20 90.1
Msa1072250 MtrunA17_Chr4g0044421 42.268 97 53 2 90 184 13 108 4.86e-20 87.0
Msa1072250 MtrunA17_Chr5g0440781 42.857 98 54 2 91 186 14 111 5.21e-20 86.7
Msa1072250 MtrunA17_Chr5g0440761 41.905 105 56 3 91 193 14 115 6.12e-20 88.6
Msa1072250 MtrunA17_Chr7g0254411 40.541 111 61 2 82 191 9 115 7.40e-20 89.4
Msa1072250 MtrunA17_Chr5g0441141 42.857 98 54 2 91 186 14 111 8.55e-20 88.2
Msa1072250 MtrunA17_Chr4g0013361 44.643 112 57 3 84 193 8 116 1.51e-19 87.8
Msa1072250 MtrunA17_Chr4g0060721 39.216 102 61 1 91 191 15 116 1.59e-19 88.6
Msa1072250 MtrunA17_Chr7g0217741 40.678 118 63 3 76 191 3 115 1.86e-19 87.8
Msa1072250 MtrunA17_Chr3g0092401 39.216 102 61 1 91 191 15 116 2.03e-19 87.8
Msa1072250 MtrunA17_Chr1g0194951 37.288 118 67 3 76 191 3 115 2.11e-19 88.6
Msa1072250 MtrunA17_Chr1g0168661 43.000 100 54 2 87 184 19 117 4.73e-19 85.9
Msa1072250 MtrunA17_Chr7g0238651 38.393 112 66 1 86 194 2 113 9.67e-19 86.3
Msa1072250 MtrunA17_Chr4g0072751 42.857 98 54 2 91 186 14 111 1.04e-18 86.3
Msa1072250 MtrunA17_Chr5g0434571 32.335 167 98 4 82 238 45 206 1.58e-18 85.9
Msa1072250 MtrunA17_Chr4g0068921 42.268 97 55 1 91 186 26 122 3.36e-18 82.0
Msa1072250 MtrunA17_Chr5g0434901 53.226 62 29 0 124 185 9 70 4.36e-18 79.3
Msa1072250 MtrunA17_Chr3g0110351 41.071 112 59 3 82 191 9 115 4.71e-18 84.0
Msa1072250 MtrunA17_Chr1g0194291 37.273 110 67 2 91 198 23 132 5.29e-18 82.8
Msa1072250 MtrunA17_Chr2g0293911 39.091 110 65 2 91 198 26 135 5.89e-18 84.0
Msa1072250 MtrunA17_Chr4g0068061 37.255 102 63 1 91 191 14 115 7.82e-18 83.6
Msa1072250 MtrunA17_Chr4g0057031 39.806 103 59 2 91 191 14 115 1.04e-17 82.0
Msa1072250 MtrunA17_Chr6g0450101 41.053 95 55 1 91 184 16 110 1.39e-17 80.5
Msa1072250 MtrunA17_Chr7g0247131 43.373 83 47 0 124 206 14 96 1.61e-17 81.6
Msa1072250 MtrunA17_Chr8g0349261 41.346 104 57 3 91 191 15 117 1.73e-17 82.0
Msa1072250 MtrunA17_Chr5g0416341 31.250 144 77 2 94 228 29 159 2.32e-17 83.2
Msa1072250 MtrunA17_Chr7g0229101 30.625 160 84 3 124 256 8 167 3.43e-17 79.3
Msa1072250 MtrunA17_Chr8g0362231 35.714 98 63 0 94 191 25 122 6.36e-17 81.6
Msa1072250 MtrunA17_Chr3g0099141 43.902 82 45 1 91 171 42 123 4.70e-16 74.3
Msa1072250 MtrunA17_Chr7g0229131 33.065 124 77 2 120 237 2 125 1.14e-15 74.3
Msa1072250 MtrunA17_Chr6g0487491 38.393 112 59 3 91 192 14 125 1.34e-15 75.9
Msa1072250 MtrunA17_Chr5g0425591 45.122 82 41 3 91 169 11 91 1.94e-15 71.2
Msa1072250 MtrunA17_Chr3g0093811 46.377 69 35 2 124 191 18 85 2.37e-14 72.4
Msa1072250 MtrunA17_Chr7g0269831 38.739 111 63 2 82 191 9 115 3.71e-14 72.8
Msa1072250 MtrunA17_Chr6g0483051 37.363 91 56 1 94 184 72 161 4.19e-14 73.6
Msa1072250 MtrunA17_Chr2g0323321 41.250 80 44 2 91 168 13 91 9.46e-14 67.0
Msa1072250 MtrunA17_Chr4g0042611 41.333 75 43 1 91 164 14 88 3.56e-13 64.7
Msa1072250 MtrunA17_Chr5g0395221 42.667 75 42 1 91 164 14 88 1.31e-12 63.2
Msa1072250 MtrunA17_Chr8g0342511 42.667 75 40 2 91 163 14 87 2.38e-12 62.8
Msa1072250 MtrunA17_Chr8g0342531 40.260 77 43 2 91 165 14 89 6.65e-12 63.5
Msa1072250 MtrunA17_Chr7g0274481 40.000 85 50 1 92 176 8 91 8.52e-12 66.6
Msa1072250 MtrunA17_Chr3g0104491 50.000 52 26 0 141 192 17 68 1.74e-11 64.3
Msa1072250 MtrunA17_Chr5g0421201 50.000 50 25 0 143 192 12 61 2.11e-11 62.4
Msa1072250 MtrunA17_Chr6g0453751 41.573 89 42 4 91 169 22 110 2.27e-11 60.8
Msa1072250 MtrunA17_Chr7g0233151 46.154 52 28 0 141 192 1 52 2.86e-11 61.6
Msa1072250 MtrunA17_Chr8g0342461 41.026 78 42 3 91 165 14 90 2.91e-11 60.8
Msa1072250 MtrunA17_Chr3g0104501 54.902 51 23 0 91 141 133 183 5.08e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1072250 AT5G17800.1 43.158 285 104 6 86 362 88 322 6.99e-71 224
Msa1072250 AT1G69560.1 46.739 276 94 9 90 363 106 330 1.99e-69 221
Msa1072250 AT1G69560.2 46.739 276 94 9 90 363 122 346 2.70e-69 221
Msa1072250 AT1G26780.1 77.586 116 26 0 88 203 95 210 3.08e-66 211
Msa1072250 AT1G26780.2 77.586 116 26 0 88 203 95 210 1.46e-65 212
Msa1072250 AT1G17950.1 75.926 108 26 0 88 195 2 109 8.60e-61 196
Msa1072250 AT3G29020.1 71.795 117 33 0 86 202 60 176 1.42e-60 195
Msa1072250 AT3G29020.2 71.795 117 33 0 86 202 62 178 5.75e-60 196
Msa1072250 AT4G33450.1 76.415 106 25 0 89 194 17 122 3.04e-58 189
Msa1072250 AT1G73410.1 43.636 275 116 8 88 361 3 239 4.90e-58 189
Msa1072250 AT1G73410.2 79.439 107 22 0 88 194 3 109 7.26e-57 184
Msa1072250 AT5G39700.1 64.423 104 37 0 92 195 57 160 4.25e-43 148
Msa1072250 AT5G67300.1 43.713 167 80 4 91 250 6 165 6.44e-38 138
Msa1072250 AT4G37260.1 41.875 160 78 3 91 248 13 159 2.91e-37 137
Msa1072250 AT3G55730.1 54.808 104 47 0 91 194 56 159 2.80e-36 136
Msa1072250 AT2G39880.1 53.043 115 52 1 84 198 45 157 5.30e-36 134
Msa1072250 AT2G23290.1 53.465 101 47 0 91 191 13 113 3.52e-35 131
Msa1072250 AT3G50060.1 53.465 101 47 0 91 191 6 106 8.00e-35 130
Msa1072250 AT3G09230.1 54.455 101 46 0 91 191 55 155 1.99e-34 131
Msa1072250 AT3G09370.2 52.475 101 48 0 91 191 135 235 1.58e-31 125
Msa1072250 AT3G09370.1 52.475 101 48 0 91 191 130 230 1.68e-31 124
Msa1072250 AT3G09370.3 52.475 101 48 0 91 191 143 243 2.47e-31 124
Msa1072250 AT5G02320.1 52.475 101 48 0 91 191 127 227 3.76e-31 124
Msa1072250 AT5G02320.2 52.475 101 48 0 91 191 127 227 3.76e-31 124
Msa1072250 AT5G02320.3 52.475 101 48 0 91 191 67 167 4.58e-31 123
Msa1072250 AT4G32730.5 41.481 135 74 2 61 191 54 187 2.12e-30 123
Msa1072250 AT4G32730.4 41.481 135 74 2 61 191 54 187 2.12e-30 123
Msa1072250 AT4G32730.3 41.481 135 74 2 61 191 54 187 2.12e-30 123
Msa1072250 AT4G32730.2 41.481 135 74 2 61 191 54 187 2.12e-30 123
Msa1072250 AT4G32730.1 41.481 135 74 2 61 191 54 187 2.34e-30 122
Msa1072250 AT5G11510.2 40.000 135 76 2 61 191 48 181 9.95e-30 121
Msa1072250 AT5G11510.3 40.000 135 76 2 61 191 48 181 1.00e-29 121
Msa1072250 AT5G11510.1 40.000 135 76 2 61 191 48 181 1.00e-29 121
Msa1072250 AT5G11510.4 40.000 135 76 2 61 191 48 181 1.00e-29 121
Msa1072250 AT5G11510.5 39.706 136 77 2 60 191 47 181 1.01e-29 120
Msa1072250 AT5G11050.1 35.644 202 93 5 91 290 105 271 1.14e-29 118
Msa1072250 AT5G58850.1 50.000 112 56 0 80 191 94 205 1.20e-29 118
Msa1072250 AT5G40360.1 40.000 150 87 2 46 192 110 259 5.65e-29 115
Msa1072250 AT3G27785.1 50.000 102 51 0 91 192 189 290 2.25e-27 112
Msa1072250 AT2G25230.1 49.495 99 48 2 93 190 28 125 4.70e-27 107
Msa1072250 AT4G18770.1 42.857 126 72 0 91 216 217 342 5.10e-27 111
Msa1072250 AT3G11440.2 42.735 117 66 1 84 199 36 152 2.68e-26 109
Msa1072250 AT3G11440.3 42.735 117 66 1 84 199 36 152 3.21e-26 110
Msa1072250 AT3G11440.4 42.735 117 66 1 84 199 36 152 3.21e-26 110
Msa1072250 AT3G11440.1 42.735 117 66 1 84 199 36 152 3.21e-26 110
Msa1072250 AT3G48920.1 41.463 123 69 2 91 210 20 142 7.83e-26 105
Msa1072250 AT1G79180.1 46.602 103 52 2 91 191 16 117 4.70e-25 103
Msa1072250 AT2G32460.1 45.045 111 58 2 91 199 20 129 5.83e-25 106
Msa1072250 AT2G32460.2 45.045 111 58 2 91 199 8 117 6.28e-25 105
Msa1072250 AT5G40430.1 30.396 227 138 6 46 262 4 220 7.60e-25 102
Msa1072250 AT5G40330.1 43.137 102 57 1 91 191 14 115 8.26e-25 100
Msa1072250 AT4G28110.1 43.478 115 59 2 83 191 1 115 8.35e-25 102
Msa1072250 AT5G06100.1 43.636 110 61 1 91 199 34 143 1.46e-24 104
Msa1072250 AT4G25560.1 43.363 113 61 2 81 191 2 113 1.54e-24 102
Msa1072250 AT4G26930.1 43.636 110 61 1 91 199 21 130 1.55e-24 103
Msa1072250 AT2G26950.1 34.524 168 96 4 83 243 10 170 1.61e-24 103
Msa1072250 AT3G27920.1 44.118 102 56 1 91 191 16 117 1.74e-24 100
Msa1072250 AT5G06100.5 43.636 110 61 1 91 199 34 143 1.78e-24 104
Msa1072250 AT5G06100.2 43.636 110 61 1 91 199 34 143 1.78e-24 104
Msa1072250 AT5G06100.3 43.636 110 61 1 91 199 34 143 1.78e-24 104
Msa1072250 AT5G06100.4 43.636 110 61 1 91 199 34 143 1.78e-24 104
Msa1072250 AT5G14750.1 43.137 102 57 1 91 191 18 119 1.96e-24 99.8
Msa1072250 AT3G23250.1 34.637 179 109 3 91 268 14 185 2.08e-24 101
Msa1072250 AT3G12720.1 45.631 103 53 2 91 191 24 125 4.24e-24 101
Msa1072250 AT1G63910.1 39.695 131 73 2 83 207 1 131 4.62e-24 102
Msa1072250 AT1G18570.1 44.118 102 56 1 91 191 15 116 5.54e-24 101
Msa1072250 AT5G56110.1 46.078 102 54 1 91 191 14 115 9.41e-24 100
Msa1072250 AT1G74080.1 35.802 162 97 3 91 250 14 170 2.65e-23 99.4
Msa1072250 AT5G61420.2 39.007 141 84 2 91 229 14 154 2.76e-23 100
Msa1072250 AT3G28470.1 49.474 95 47 1 91 184 14 108 2.96e-23 99.0
Msa1072250 AT1G56160.1 44.660 103 54 2 91 191 16 117 3.15e-23 98.6
Msa1072250 AT2G31180.1 44.118 102 56 1 91 191 14 115 3.80e-23 97.4
Msa1072250 AT4G05100.1 42.241 116 60 2 83 191 1 116 4.52e-23 98.6
Msa1072250 AT5G07700.1 37.736 159 91 3 91 242 14 171 6.03e-23 98.6
Msa1072250 AT5G07700.2 37.736 159 91 3 91 242 14 171 6.03e-23 98.6
Msa1072250 AT5G54230.1 43.137 102 57 1 91 191 14 115 6.49e-23 98.2
Msa1072250 AT5G65230.1 45.631 103 53 2 91 191 14 115 7.69e-23 97.8
Msa1072250 AT1G09540.1 38.462 143 84 3 85 224 8 149 8.19e-23 98.6
Msa1072250 AT2G26960.1 43.243 111 62 1 90 199 21 131 1.17e-22 99.0
Msa1072250 AT3G13890.2 33.158 190 117 5 83 262 1 190 1.30e-22 97.8
Msa1072250 AT5G10280.1 44.660 103 54 2 91 191 14 115 1.32e-22 97.4
Msa1072250 AT5G60890.1 39.655 116 69 1 91 205 14 129 1.33e-22 96.7
Msa1072250 AT3G12820.1 44.660 103 54 2 91 191 16 117 1.35e-22 95.5
Msa1072250 AT5G62470.1 41.584 101 59 0 91 191 14 114 1.42e-22 97.8
Msa1072250 AT4G00540.2 46.154 104 53 1 91 191 103 206 1.66e-22 98.2
Msa1072250 AT1G74430.1 37.600 125 77 1 91 214 14 138 1.78e-22 95.9
Msa1072250 AT5G52600.1 44.118 102 56 1 91 191 14 115 1.82e-22 94.4
Msa1072250 AT1G16490.1 44.660 103 54 2 91 191 16 117 1.84e-22 95.9
Msa1072250 AT3G30210.1 40.000 125 69 2 89 212 27 146 2.26e-22 95.9
Msa1072250 AT4G00540.1 46.154 104 53 1 91 191 101 204 3.42e-22 97.8
Msa1072250 AT4G17785.2 42.735 117 58 3 83 191 1 116 3.45e-22 96.7
Msa1072250 AT4G17785.1 42.735 117 58 3 83 191 1 116 3.68e-22 96.7
Msa1072250 AT5G52260.1 48.544 103 50 2 91 191 14 115 4.10e-22 94.7
Msa1072250 AT5G55020.1 41.818 110 63 1 91 199 28 137 4.89e-22 97.8
Msa1072250 AT1G57560.2 34.302 172 108 3 85 252 8 178 6.72e-22 94.4
Msa1072250 AT1G22640.1 30.870 230 124 7 83 278 1 229 7.83e-22 94.0
Msa1072250 AT5G26660.1 34.615 156 95 3 91 240 14 168 7.98e-22 95.5
Msa1072250 AT4G38620.1 35.252 139 84 2 83 215 1 139 8.20e-22 94.4
Msa1072250 AT3G47600.1 42.157 102 58 1 91 191 14 115 8.85e-22 95.1
Msa1072250 AT3G13890.1 31.156 199 118 5 83 262 1 199 1.04e-21 95.5
Msa1072250 AT5G57620.1 43.689 103 56 2 91 191 14 116 1.58e-21 94.4
Msa1072250 AT5G07690.1 39.516 124 69 2 91 213 14 132 1.64e-21 94.4
Msa1072250 AT1G35515.1 36.522 115 67 2 83 191 1 115 1.69e-21 92.0
Msa1072250 AT3G53200.1 42.056 107 59 2 91 195 11 116 1.98e-21 92.4
Msa1072250 AT4G01680.3 39.091 110 66 1 85 193 8 117 2.14e-21 92.4
Msa1072250 AT3G02940.2 39.130 115 64 2 83 191 1 115 2.24e-21 93.6
Msa1072250 AT4G21440.1 43.137 102 57 1 91 191 14 115 2.39e-21 94.4
Msa1072250 AT1G79180.2 37.037 135 51 2 91 191 16 150 2.62e-21 93.6
Msa1072250 AT5G23000.1 43.269 104 55 2 91 191 14 116 2.80e-21 93.6
Msa1072250 AT5G16770.4 39.130 115 64 2 83 191 1 115 2.93e-21 93.6
Msa1072250 AT5G16770.3 39.130 115 64 2 83 191 1 115 2.93e-21 93.6
Msa1072250 AT3G02940.1 39.130 115 64 2 83 191 1 115 3.31e-21 93.2
Msa1072250 AT3G02940.3 39.130 115 64 2 83 191 1 115 3.31e-21 93.2
Msa1072250 AT1G34670.1 40.000 115 63 2 83 191 1 115 3.75e-21 94.0
Msa1072250 AT5G16770.1 39.130 115 64 2 83 191 1 115 3.77e-21 93.6
Msa1072250 AT5G16770.2 39.130 115 64 2 83 191 1 115 3.77e-21 93.6
Msa1072250 AT5G35550.1 40.777 103 60 1 90 191 15 117 3.79e-21 92.0
Msa1072250 AT5G62470.2 41.176 102 59 1 91 191 14 115 4.22e-21 93.6
Msa1072250 AT4G01680.1 39.091 110 66 1 85 193 8 117 4.76e-21 93.2
Msa1072250 AT4G09460.1 31.609 174 103 3 83 240 1 174 5.89e-21 90.9
Msa1072250 AT5G15310.1 37.415 147 83 3 83 223 1 144 6.76e-21 92.4
Msa1072250 AT1G06180.1 41.026 117 61 4 82 195 9 120 7.14e-21 90.9
Msa1072250 AT5G15310.2 37.415 147 83 3 83 223 1 144 7.30e-21 92.4
Msa1072250 AT1G66370.1 37.963 108 66 1 91 197 10 117 7.36e-21 90.9
Msa1072250 AT3G49690.1 43.689 103 56 2 91 191 14 116 1.06e-20 91.7
Msa1072250 AT5G12870.1 37.391 115 71 1 78 191 7 121 1.27e-20 90.9
Msa1072250 AT3G01140.2 39.130 115 64 2 83 191 1 115 1.30e-20 92.0
Msa1072250 AT3G46130.1 41.121 107 60 2 91 195 11 116 1.45e-20 90.5
Msa1072250 AT1G57560.1 35.172 145 89 3 85 227 8 149 1.64e-20 91.3
Msa1072250 AT5G59780.3 40.187 107 61 2 91 195 10 115 1.73e-20 89.7
Msa1072250 AT5G14750.3 48.529 68 35 0 124 191 18 85 2.03e-20 87.8
Msa1072250 AT5G14340.1 40.000 105 60 2 91 193 26 129 2.12e-20 90.1
Msa1072250 AT3G01140.1 41.176 102 59 1 91 191 57 158 2.13e-20 92.0
Msa1072250 AT5G15310.4 39.130 115 64 2 83 191 1 115 2.36e-20 89.4
Msa1072250 AT1G18710.1 40.196 102 60 1 91 191 14 115 2.60e-20 89.7
Msa1072250 AT3G60460.1 45.714 105 55 2 91 193 13 117 2.62e-20 90.5
Msa1072250 AT5G65790.1 34.752 141 86 3 91 225 14 154 3.33e-20 91.3
Msa1072250 AT2G47190.1 40.000 110 64 2 91 198 22 131 4.35e-20 89.4
Msa1072250 AT3G08500.1 42.157 102 58 1 91 191 32 133 4.39e-20 90.5
Msa1072250 AT1G66380.1 37.600 125 77 1 84 207 3 127 6.74e-20 85.5
Msa1072250 AT1G25340.2 38.462 104 60 1 91 194 20 119 6.93e-20 89.0
Msa1072250 AT1G25340.3 38.462 104 60 1 91 194 20 119 7.80e-20 89.4
Msa1072250 AT4G01680.2 37.705 122 63 2 85 193 8 129 7.90e-20 89.7
Msa1072250 AT1G25340.1 38.095 105 64 1 91 194 20 124 9.12e-20 88.6
Msa1072250 AT3G28910.1 40.196 102 60 1 91 191 14 115 1.01e-19 89.4
Msa1072250 AT2G16720.1 37.069 116 65 3 83 191 1 115 1.08e-19 88.2
Msa1072250 AT3G61250.1 37.594 133 76 3 82 212 9 136 1.17e-19 88.6
Msa1072250 AT4G34990.1 37.391 115 66 2 83 191 1 115 1.18e-19 88.2
Msa1072250 AT3G13540.1 31.481 162 101 3 91 242 25 186 1.44e-19 87.4
Msa1072250 AT1G56650.1 31.176 170 109 3 84 252 3 165 1.54e-19 87.4
Msa1072250 AT1G68320.1 39.623 106 61 2 91 194 21 125 1.84e-19 87.8
Msa1072250 AT1G66230.1 33.939 165 100 5 82 242 9 168 2.22e-19 87.4
Msa1072250 AT5G16600.1 37.594 133 76 3 82 212 9 136 2.55e-19 88.2
Msa1072250 AT5G49620.1 36.232 138 82 3 63 198 4 137 3.13e-19 87.4
Msa1072250 AT1G74650.1 38.235 102 62 1 91 191 14 115 3.57e-19 87.8
Msa1072250 AT2G02820.1 33.884 121 80 0 94 214 33 153 4.59e-19 88.6
Msa1072250 AT2G02820.3 33.884 121 80 0 94 214 33 153 5.38e-19 87.4
Msa1072250 AT2G02820.2 33.884 121 80 0 94 214 33 153 5.80e-19 88.6
Msa1072250 AT1G08810.1 34.014 147 94 2 91 234 14 160 7.91e-19 85.9
Msa1072250 AT2G36890.1 42.308 104 56 3 91 191 14 116 8.75e-19 86.3
Msa1072250 AT3G12820.2 51.471 68 33 0 124 191 2 69 8.92e-19 84.0
Msa1072250 AT2G36890.2 42.308 104 56 3 91 191 55 157 9.48e-19 86.7
Msa1072250 AT4G13480.1 40.187 107 61 2 87 191 4 109 9.86e-19 85.1
Msa1072250 AT3G24310.1 44.792 96 50 2 91 184 20 114 1.05e-18 85.5
Msa1072250 AT3G53200.2 48.611 72 37 0 124 195 12 83 1.42e-18 83.6
Msa1072250 AT1G48000.1 43.158 95 53 1 91 184 34 128 1.64e-18 84.3
Msa1072250 AT5G35550.2 46.154 78 40 1 116 191 43 120 2.41e-18 84.3
Msa1072250 AT5G40350.1 41.053 95 55 1 91 184 19 113 3.39e-18 82.8
Msa1072250 AT4G12350.1 38.679 106 62 2 88 191 11 115 3.95e-18 84.0
Msa1072250 AT3G27810.1 41.053 95 55 1 91 184 22 116 6.08e-18 82.4
Msa1072250 AT3G01530.1 40.196 102 58 2 91 190 27 127 1.04e-17 81.3
Msa1072250 AT2G47460.1 35.556 135 77 3 91 224 14 139 1.18e-17 84.0
Msa1072250 AT4G22680.1 40.777 103 58 2 91 191 14 115 1.29e-17 82.0
Msa1072250 AT1G14350.2 34.951 103 67 0 94 196 28 130 1.41e-17 84.0
Msa1072250 AT1G14350.1 34.951 103 67 0 94 196 28 130 1.41e-17 84.0
Msa1072250 AT5G26660.2 35.537 121 74 1 124 240 17 137 1.43e-17 82.8
Msa1072250 AT3G06490.1 39.091 110 65 2 91 198 21 130 1.58e-17 82.8
Msa1072250 AT4G37780.1 37.864 103 62 2 91 191 14 116 1.94e-17 82.4
Msa1072250 AT5G49330.1 37.864 103 61 2 91 191 14 115 3.55e-17 82.0
Msa1072250 AT5G59780.2 45.833 72 39 0 124 195 23 94 4.28e-17 79.7
Msa1072250 AT2G37630.1 33.571 140 83 2 91 220 4 143 5.39e-17 82.0
Msa1072250 AT3G46130.3 43.210 81 44 1 117 195 4 84 6.20e-17 79.3
Msa1072250 AT1G66390.1 40.000 110 65 1 84 192 3 112 6.90e-17 79.7
Msa1072250 AT3G46130.4 45.833 72 39 0 124 195 23 94 8.38e-17 79.3
Msa1072250 AT3G62610.1 35.043 117 71 2 76 191 3 115 1.63e-16 80.1
Msa1072250 AT3G18100.1 38.298 94 58 0 91 184 546 639 2.94e-16 80.9
Msa1072250 AT3G18100.1 33.684 95 61 2 91 184 495 588 7.71e-11 64.3
Msa1072250 AT3G18100.3 38.298 94 58 0 91 184 498 591 3.16e-16 80.9
Msa1072250 AT3G18100.3 33.684 95 61 2 91 184 447 540 8.11e-11 63.9
Msa1072250 AT3G18100.4 38.298 94 58 0 91 184 385 478 4.54e-16 80.1
Msa1072250 AT3G18100.2 38.298 94 58 0 91 184 333 426 5.10e-16 80.1
Msa1072250 AT5G49620.2 32.895 152 82 4 63 198 4 151 7.32e-16 78.2
Msa1072250 AT5G40350.2 47.541 61 32 0 124 184 8 68 1.41e-15 74.3
Msa1072250 AT3G27810.2 47.541 61 32 0 124 184 7 67 2.94e-15 73.6
Msa1072250 AT1G66380.3 42.857 84 48 0 124 207 11 94 3.38e-15 71.2
Msa1072250 AT5G62320.1 38.182 110 58 3 91 191 15 123 4.31e-15 74.7
Msa1072250 AT3G47600.2 45.588 68 37 0 124 191 42 109 9.14e-15 74.7
Msa1072250 AT1G71030.2 41.538 65 38 0 127 191 5 69 1.31e-13 68.9
Msa1072250 AT1G71030.1 41.538 65 38 0 127 191 19 83 1.64e-13 68.9
Msa1072250 AT5G14750.4 41.379 58 34 0 134 191 1 58 6.19e-13 66.2
Msa1072250 AT5G14750.2 41.379 58 34 0 134 191 1 58 6.19e-13 66.2
Msa1072250 AT3G23250.2 31.852 135 85 2 134 268 1 128 2.66e-12 66.2
Msa1072250 AT1G22640.3 29.070 172 95 4 134 278 1 172 3.47e-12 65.5
Msa1072250 AT1G09770.1 40.000 85 50 1 92 176 8 91 1.99e-11 65.9

Find 87 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTACAGTTTGTTCTATAAA+AGG 0.209769 7_2:-69249122 Msa1072250:three_prime_UTR
CTGAATATGGTCCTCAAAAT+TGG 0.247103 7_2:-69250638 Msa1072250:CDS
AGGTCCAATATCTCAATTTC+TGG 0.252170 7_2:-69249331 Msa1072250:CDS
TTCACCAGAAATTGAGATAT+TGG 0.257304 7_2:+69249327 None:intergenic
ATTGTATAAACTCCTGGTTT+TGG 0.307076 7_2:-69248964 Msa1072250:three_prime_UTR
AAGGAGCTTGTTGCTGAATA+TGG 0.317262 7_2:-69250651 Msa1072250:CDS
GAAAGACTTTCAACAACAAC+TGG 0.343876 7_2:+69250005 None:intergenic
TTGTTATGCTGTGGTACTTT+TGG 0.354798 7_2:-69248905 Msa1072250:three_prime_UTR
TTAAGTTTAGCATCTTCTAT+TGG 0.361231 7_2:+69250672 None:intergenic
CTCTTCTTCCTCCTCAGAAA+AGG 0.362113 7_2:+69250181 None:intergenic
ACTATCTCAAGCACCATTGA+TGG 0.370339 7_2:-69249936 Msa1072250:CDS
TCAAGGCTATGGATCACTAA+TGG 0.371833 7_2:-69249820 Msa1072250:CDS
AGGAGCTATACAAAGCTAAA+TGG 0.376612 7_2:-69249245 Msa1072250:exon
AAAGCACCCATCTTCTACTT+TGG 0.377594 7_2:+69250806 None:intergenic
AGGAGTGAGTGAGAGATTAG+TGG 0.388076 7_2:+69249899 None:intergenic
AATTGAGATATTGGACCTAT+TGG 0.389765 7_2:+69249336 None:intergenic
ATAAAATGTATGGTAACAAA+TGG 0.396082 7_2:-69250142 Msa1072250:CDS
TTAGCTGCTCATAAAATGTA+TGG 0.406757 7_2:-69250152 Msa1072250:CDS
TCCTTTGACAAACCCTGAAA+AGG 0.411626 7_2:-69250862 Msa1072250:CDS
AGCTTTGTTCTAGAGGTCAT+TGG 0.416349 7_2:-69250698 Msa1072250:CDS
GTTTGTCAAAGGAAGAGCTT+TGG 0.416396 7_2:+69250872 None:intergenic
AATAGAAGATGCTAAACTTA+AGG 0.419512 7_2:-69250670 Msa1072250:CDS
AGCTCTGTTTCTGTGAAAGT+TGG 0.422370 7_2:-69250729 Msa1072250:CDS
ACAAGATGAGTTGAAGGAAT+AGG 0.438760 7_2:+69250900 None:intergenic
AACAGTGTACTGTGTATAGA+AGG 0.441649 7_2:-69250034 Msa1072250:CDS
TAGCCTTGATGACTCTCAAC+TGG 0.446270 7_2:+69249834 None:intergenic
CCATCCAAGTCATAAAACTT+TGG 0.446284 7_2:+69248864 None:intergenic
CAAGGCTATGGATCACTAAT+GGG 0.446395 7_2:-69249819 Msa1072250:intron
TTGATTGCAGAACATCTTGA+AGG 0.454431 7_2:-69250612 Msa1072250:CDS
CAAAGCTAAATGGTTGATAC+AGG 0.458360 7_2:-69249235 Msa1072250:exon
TTTAAGTCCAAAGTAGAAGA+TGG 0.458745 7_2:-69250813 Msa1072250:CDS
AGTTGAGACATTTCCATCAA+TGG 0.463655 7_2:+69249923 None:intergenic
ACTTTGGACTTAAACATTGA+GGG 0.468793 7_2:+69250822 None:intergenic
TTCTCATATAGCAGAATACT+AGG 0.469714 7_2:-69248936 Msa1072250:three_prime_UTR
ATAATAATTGTATAAACTCC+TGG 0.469951 7_2:-69248970 Msa1072250:three_prime_UTR
ATAATGCAGTGAAGAATCAT+TGG 0.470220 7_2:-69250085 Msa1072250:CDS
GAGAAAGTGTGGTGGCAACT+AGG 0.473551 7_2:-69249498 Msa1072250:CDS
AGAAAGTGTGGTGGCAACTA+GGG 0.475189 7_2:-69249497 Msa1072250:CDS
ATACAGGAAGATCATGGGTT+AGG 0.478477 7_2:-69249219 Msa1072250:three_prime_UTR
GATGGGTGCTTTGAGGTTCA+AGG 0.478786 7_2:-69250795 Msa1072250:CDS
TACTTTGGACTTAAACATTG+AGG 0.483288 7_2:+69250821 None:intergenic
GAATCAACAAGATGAGTTGA+AGG 0.483992 7_2:+69250894 None:intergenic
GAACATCTTGAAGGAAGATC+AGG 0.486206 7_2:-69250603 Msa1072250:intron
GTTGAAGGAATAGGAGCTAA+AGG 0.488826 7_2:+69250909 None:intergenic
CCTTTGACAAACCCTGAAAA+GGG 0.491757 7_2:-69250861 Msa1072250:CDS
CTGAGTCAGTTACCACCAAT+AGG 0.493276 7_2:-69249351 Msa1072250:CDS
TACTCCAAGCTTTGTTCTAG+AGG 0.507196 7_2:-69250705 Msa1072250:CDS
TAAAATGTATGGTAACAAAT+GGG 0.508678 7_2:-69250141 Msa1072250:CDS
ACTCCAAGAAAATCAATGAA+TGG 0.522689 7_2:+69249268 None:intergenic
TGAGATATTGGACCTATTGG+TGG 0.526375 7_2:+69249339 None:intergenic
GTTGAGAGTCATCAAGGCTA+TGG 0.526802 7_2:-69249831 Msa1072250:CDS
TGTTGTTGAAAGTCTTTCAA+AGG 0.527307 7_2:-69250000 Msa1072250:CDS
GCAAGGGAACCGTTTGTGTT+GGG 0.529275 7_2:-69249177 Msa1072250:three_prime_UTR
AGTAGAAGATGGGTGCTTTG+AGG 0.530721 7_2:-69250802 Msa1072250:CDS
TGAGGACTTAGTTTAGCTGA+AGG 0.532322 7_2:+69249879 None:intergenic
GAATCATTGGCATGTGATCA+TGG 0.539113 7_2:-69250072 Msa1072250:CDS
TCTCATATAGCAGAATACTA+GGG 0.547555 7_2:-69248935 Msa1072250:three_prime_UTR
TGCAAGGGAACCGTTTGTGT+TGG 0.549674 7_2:-69249178 Msa1072250:three_prime_UTR
GTTCCAGTTGAGAGTCATCA+AGG 0.549857 7_2:-69249837 Msa1072250:CDS
TGGTTGATACAGGAAGATCA+TGG 0.550140 7_2:-69249225 Msa1072250:three_prime_UTR
TGATCATGGCTAGAAGACAT+AGG 0.551949 7_2:-69250058 Msa1072250:CDS
ATGACCTCTAGAACAAAGCT+TGG 0.553743 7_2:+69250701 None:intergenic
GCTAAAGCTAATAGATGTAG+TGG 0.558145 7_2:-69249419 Msa1072250:CDS
GATCATGGGTTAGGAAAGTG+AGG 0.563056 7_2:-69249210 Msa1072250:three_prime_UTR
ACTGCATTATCTGTCCTCCC+TGG 0.564600 7_2:+69250098 None:intergenic
GATCATGGCTAGAAGACATA+GGG 0.580957 7_2:-69250057 Msa1072250:CDS
GGGCCTTGTTTGTTATGCTG+TGG 0.583138 7_2:-69248914 Msa1072250:three_prime_UTR
TCTGGTGAAAGTGAAAATGT+TGG 0.594833 7_2:-69249313 Msa1072250:CDS
TTAAGTCCAAAGTAGAAGAT+GGG 0.595363 7_2:-69250812 Msa1072250:CDS
AGCTTGTAAGAAGAATGAAC+AGG 0.595462 7_2:-69249449 Msa1072250:CDS
TATGAAAGTGATGATGACTT+AGG 0.598889 7_2:-69249017 Msa1072250:three_prime_UTR
GTTGAACTTCTGTGAAGTCA+TGG 0.600796 7_2:+69250959 None:intergenic
ACTAGTTTATCAAACAGTTG+AGG 0.605771 7_2:+69249861 None:intergenic
ATGAGAAACAGTCCAAAACC+AGG 0.613282 7_2:+69248952 None:intergenic
TATAGAACAAACTGTACACA+AGG 0.613504 7_2:+69249127 None:intergenic
GGTTGATACAGGAAGATCAT+GGG 0.615733 7_2:-69249224 Msa1072250:three_prime_UTR
GTGAGGGTAGTCAGATGCAA+GGG 0.623599 7_2:-69249193 Msa1072250:three_prime_UTR
AGTGAGGGTAGTCAGATGCA+AGG 0.624309 7_2:-69249194 Msa1072250:three_prime_UTR
ATCATGGGTTAGGAAAGTGA+GGG 0.631123 7_2:-69249209 Msa1072250:three_prime_UTR
CTCATATAGCAGAATACTAG+GGG 0.639695 7_2:-69248934 Msa1072250:three_prime_UTR
AAAGCTAATAGATGTAGTGG+TGG 0.642741 7_2:-69249416 Msa1072250:CDS
AGACAAATCTAGAGAAAGTG+TGG 0.652450 7_2:-69249509 Msa1072250:CDS
GTACCACAGCATAACAAACA+AGG 0.673323 7_2:+69248911 None:intergenic
TTGTAAGAAGAATGAACAGG+TGG 0.680203 7_2:-69249446 Msa1072250:CDS
ACTTCACAGAAGTTCAACAA+TGG 0.689923 7_2:-69250954 Msa1072250:CDS
CAAATCTAGAGAAAGTGTGG+TGG 0.706572 7_2:-69249506 Msa1072250:CDS
ATAGAACAAACTGTACACAA+GGG 0.723372 7_2:+69249128 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTAATATTTATAAAT+TGG - chr7_2:69249430-69249449 Msa1072250:CDS 0.0%
!!! TTTTTTAATATTTATAAATT+GGG - chr7_2:69249431-69249450 Msa1072250:CDS 0.0%
!!! TTTTTTTAATATTTATAAAT+TGG - chr7_2:69249430-69249449 Msa1072250:CDS 0.0%
!!! TTTTTTAATATTTATAAATT+GGG - chr7_2:69249431-69249450 Msa1072250:CDS 0.0%
!!! TTAATATTTTCTTAAAAATG+GGG + chr7_2:69249227-69249246 None:intergenic 10.0%
!!! CTTTAATATTTTCTTAAAAA+TGG + chr7_2:69249229-69249248 None:intergenic 10.0%
!!! TTAATATTTTCTTAAAAATG+GGG + chr7_2:69249227-69249246 None:intergenic 10.0%
!!! CTTTAATATTTTCTTAAAAA+TGG + chr7_2:69249229-69249248 None:intergenic 10.0%
!! AAAATATTAAAATACATGCA+AGG + chr7_2:69249512-69249531 None:intergenic 15.0%
!! ATATTTAATAATCTCTCATT+AGG - chr7_2:69250001-69250020 Msa1072250:CDS 15.0%
!!! ACTATGTTTTATACTATTAT+AGG + chr7_2:69250027-69250046 None:intergenic 15.0%
!! TGTTATGTAACAATTAAATT+TGG + chr7_2:69250234-69250253 None:intergenic 15.0%
!! AATGAATTGAAGAAAAAAAT+AGG - chr7_2:69250712-69250731 Msa1072250:CDS 15.0%
!! AAAATATTAAAATACATGCA+AGG + chr7_2:69249512-69249531 None:intergenic 15.0%
!! ATATTTAATAATCTCTCATT+AGG - chr7_2:69250001-69250020 Msa1072250:CDS 15.0%
!!! ACTATGTTTTATACTATTAT+AGG + chr7_2:69250027-69250046 None:intergenic 15.0%
!! TGTTATGTAACAATTAAATT+TGG + chr7_2:69250234-69250253 None:intergenic 15.0%
!! AATGAATTGAAGAAAAAAAT+AGG - chr7_2:69250712-69250731 Msa1072250:CDS 15.0%
!!! TTTTGTTCAATTTTAATTGC+AGG - chr7_2:69249531-69249550 Msa1072250:intron 20.0%
!! ATAAAATGTATGGTAACAAA+TGG - chr7_2:69249649-69249668 Msa1072250:intron 20.0%
!! TAAAATGTATGGTAACAAAT+GGG - chr7_2:69249650-69249669 Msa1072250:intron 20.0%
!!! TAAAACATAGTTTTAAGTTG+CGG - chr7_2:69250036-69250055 Msa1072250:CDS 20.0%
!! CACTACAAATATTTATATTG+CGG - chr7_2:69250068-69250087 Msa1072250:CDS 20.0%
!! ATAATAATTGTATAAACTCC+TGG - chr7_2:69250821-69250840 Msa1072250:CDS 20.0%
!!! TTTTGTTCAATTTTAATTGC+AGG - chr7_2:69249531-69249550 Msa1072250:intron 20.0%
!! ATAAAATGTATGGTAACAAA+TGG - chr7_2:69249649-69249668 Msa1072250:intron 20.0%
!! TAAAATGTATGGTAACAAAT+GGG - chr7_2:69249650-69249669 Msa1072250:intron 20.0%
!!! TAAAACATAGTTTTAAGTTG+CGG - chr7_2:69250036-69250055 Msa1072250:CDS 20.0%
!! CACTACAAATATTTATATTG+CGG - chr7_2:69250068-69250087 Msa1072250:CDS 20.0%
!! ATAATAATTGTATAAACTCC+TGG - chr7_2:69250821-69250840 Msa1072250:CDS 20.0%
!!! AAAAACTTGTCTTTGAAACT+TGG - chr7_2:69249020-69249039 Msa1072250:three_prime_UTR 25.0%
! TTAAGTTTAGCATCTTCTAT+TGG + chr7_2:69249122-69249141 None:intergenic 25.0%
! AATAGAAGATGCTAAACTTA+AGG - chr7_2:69249121-69249140 Msa1072250:three_prime_UTR 25.0%
!!! AGGTTTTTTTGTTGATTCTT+GGG + chr7_2:69249593-69249612 None:intergenic 25.0%
!!! AAGGTTTTTTTGTTGATTCT+TGG + chr7_2:69249594-69249613 None:intergenic 25.0%
! CGCAATATAAATATTTGTAG+TGG + chr7_2:69250070-69250089 None:intergenic 25.0%
! TTTATATTGCGGTAAAATGT+AGG - chr7_2:69250079-69250098 Msa1072250:CDS 25.0%
! GTAACAATTAAATTTGGACA+TGG + chr7_2:69250228-69250247 None:intergenic 25.0%
!!! GTGAATTTTGACAAGTATTT+TGG - chr7_2:69250319-69250338 Msa1072250:intron 25.0%
! AGAGTTTGAATCTGAAAAAT+TGG + chr7_2:69250407-69250426 None:intergenic 25.0%
!! TGTACAGTTTGTTCTATAAA+AGG - chr7_2:69250669-69250688 Msa1072250:CDS 25.0%
!!! AAAAACTTGTCTTTGAAACT+TGG - chr7_2:69249020-69249039 Msa1072250:three_prime_UTR 25.0%
! TTAAGTTTAGCATCTTCTAT+TGG + chr7_2:69249122-69249141 None:intergenic 25.0%
! AATAGAAGATGCTAAACTTA+AGG - chr7_2:69249121-69249140 Msa1072250:three_prime_UTR 25.0%
!!! AGGTTTTTTTGTTGATTCTT+GGG + chr7_2:69249593-69249612 None:intergenic 25.0%
!!! AAGGTTTTTTTGTTGATTCT+TGG + chr7_2:69249594-69249613 None:intergenic 25.0%
! CGCAATATAAATATTTGTAG+TGG + chr7_2:69250070-69250089 None:intergenic 25.0%
! TTTATATTGCGGTAAAATGT+AGG - chr7_2:69250079-69250098 Msa1072250:CDS 25.0%
! GTAACAATTAAATTTGGACA+TGG + chr7_2:69250228-69250247 None:intergenic 25.0%
!!! GTGAATTTTGACAAGTATTT+TGG - chr7_2:69250319-69250338 Msa1072250:intron 25.0%
! AGAGTTTGAATCTGAAAAAT+TGG + chr7_2:69250407-69250426 None:intergenic 25.0%
!! TGTACAGTTTGTTCTATAAA+AGG - chr7_2:69250669-69250688 Msa1072250:CDS 25.0%
ACTTTGGACTTAAACATTGA+GGG + chr7_2:69248972-69248991 None:intergenic 30.0%
TACTTTGGACTTAAACATTG+AGG + chr7_2:69248973-69248992 None:intergenic 30.0%
TTTAAGTCCAAAGTAGAAGA+TGG - chr7_2:69248978-69248997 Msa1072250:three_prime_UTR 30.0%
TTAAGTCCAAAGTAGAAGAT+GGG - chr7_2:69248979-69248998 Msa1072250:three_prime_UTR 30.0%
! ATTTTCTTAAAAATGGGGAG+AGG + chr7_2:69249222-69249241 None:intergenic 30.0%
!! TTCTAGAGTAAATGCATGTT+TGG - chr7_2:69249265-69249284 Msa1072250:CDS 30.0%
ATTTCCATTTCTGTAATGTG+AGG - chr7_2:69249475-69249494 Msa1072250:CDS 30.0%
! CAACAAAAAAACCTTTTCTG+AGG - chr7_2:69249599-69249618 Msa1072250:intron 30.0%
TTAGCTGCTCATAAAATGTA+TGG - chr7_2:69249639-69249658 Msa1072250:intron 30.0%
!! ATAATTGCTAGACTTTTTCC+AGG - chr7_2:69249675-69249694 Msa1072250:intron 30.0%
!! TAATTGCTAGACTTTTTCCA+GGG - chr7_2:69249676-69249695 Msa1072250:intron 30.0%
ATAATGCAGTGAAGAATCAT+TGG - chr7_2:69249706-69249725 Msa1072250:intron 30.0%
TGTTGTTGAAAGTCTTTCAA+AGG - chr7_2:69249791-69249810 Msa1072250:intron 30.0%
! ACTAGTTTATCAAACAGTTG+AGG + chr7_2:69249933-69249952 None:intergenic 30.0%
TTGAATCTGAAAAATTGGAC+TGG + chr7_2:69250402-69250421 None:intergenic 30.0%
AATTGAGATATTGGACCTAT+TGG + chr7_2:69250458-69250477 None:intergenic 30.0%
TTCACCAGAAATTGAGATAT+TGG + chr7_2:69250467-69250486 None:intergenic 30.0%
!!! CTACCATTCATTGATTTTCT+TGG - chr7_2:69250520-69250539 Msa1072250:intron 30.0%
ACTCCAAGAAAATCAATGAA+TGG + chr7_2:69250526-69250545 None:intergenic 30.0%
!!! TTCATTGATTTTCTTGGAGT+AGG - chr7_2:69250526-69250545 Msa1072250:intron 30.0%
ATAGAACAAACTGTACACAA+GGG + chr7_2:69250666-69250685 None:intergenic 30.0%
TATAGAACAAACTGTACACA+AGG + chr7_2:69250667-69250686 None:intergenic 30.0%
! TATGAAAGTGATGATGACTT+AGG - chr7_2:69250774-69250793 Msa1072250:CDS 30.0%
! ATTGTATAAACTCCTGGTTT+TGG - chr7_2:69250827-69250846 Msa1072250:CDS 30.0%
TTCTCATATAGCAGAATACT+AGG - chr7_2:69250855-69250874 Msa1072250:CDS 30.0%
TCTCATATAGCAGAATACTA+GGG - chr7_2:69250856-69250875 Msa1072250:CDS 30.0%
ACTTTGGACTTAAACATTGA+GGG + chr7_2:69248972-69248991 None:intergenic 30.0%
TACTTTGGACTTAAACATTG+AGG + chr7_2:69248973-69248992 None:intergenic 30.0%
TTTAAGTCCAAAGTAGAAGA+TGG - chr7_2:69248978-69248997 Msa1072250:three_prime_UTR 30.0%
TTAAGTCCAAAGTAGAAGAT+GGG - chr7_2:69248979-69248998 Msa1072250:three_prime_UTR 30.0%
! ATTTTCTTAAAAATGGGGAG+AGG + chr7_2:69249222-69249241 None:intergenic 30.0%
!! TTCTAGAGTAAATGCATGTT+TGG - chr7_2:69249265-69249284 Msa1072250:CDS 30.0%
ATTTCCATTTCTGTAATGTG+AGG - chr7_2:69249475-69249494 Msa1072250:CDS 30.0%
! CAACAAAAAAACCTTTTCTG+AGG - chr7_2:69249599-69249618 Msa1072250:intron 30.0%
TTAGCTGCTCATAAAATGTA+TGG - chr7_2:69249639-69249658 Msa1072250:intron 30.0%
!! ATAATTGCTAGACTTTTTCC+AGG - chr7_2:69249675-69249694 Msa1072250:intron 30.0%
!! TAATTGCTAGACTTTTTCCA+GGG - chr7_2:69249676-69249695 Msa1072250:intron 30.0%
ATAATGCAGTGAAGAATCAT+TGG - chr7_2:69249706-69249725 Msa1072250:intron 30.0%
TGTTGTTGAAAGTCTTTCAA+AGG - chr7_2:69249791-69249810 Msa1072250:intron 30.0%
! ACTAGTTTATCAAACAGTTG+AGG + chr7_2:69249933-69249952 None:intergenic 30.0%
TTGAATCTGAAAAATTGGAC+TGG + chr7_2:69250402-69250421 None:intergenic 30.0%
AATTGAGATATTGGACCTAT+TGG + chr7_2:69250458-69250477 None:intergenic 30.0%
TTCACCAGAAATTGAGATAT+TGG + chr7_2:69250467-69250486 None:intergenic 30.0%
!!! CTACCATTCATTGATTTTCT+TGG - chr7_2:69250520-69250539 Msa1072250:intron 30.0%
ACTCCAAGAAAATCAATGAA+TGG + chr7_2:69250526-69250545 None:intergenic 30.0%
!!! TTCATTGATTTTCTTGGAGT+AGG - chr7_2:69250526-69250545 Msa1072250:intron 30.0%
ATAGAACAAACTGTACACAA+GGG + chr7_2:69250666-69250685 None:intergenic 30.0%
TATAGAACAAACTGTACACA+AGG + chr7_2:69250667-69250686 None:intergenic 30.0%
! TATGAAAGTGATGATGACTT+AGG - chr7_2:69250774-69250793 Msa1072250:CDS 30.0%
! ATTGTATAAACTCCTGGTTT+TGG - chr7_2:69250827-69250846 Msa1072250:CDS 30.0%
TTCTCATATAGCAGAATACT+AGG - chr7_2:69250855-69250874 Msa1072250:CDS 30.0%
TCTCATATAGCAGAATACTA+GGG - chr7_2:69250856-69250875 Msa1072250:CDS 30.0%
ACTTCACAGAAGTTCAACAA+TGG - chr7_2:69248837-69248856 Msa1072250:three_prime_UTR 35.0%
! ACAAGATGAGTTGAAGGAAT+AGG + chr7_2:69248894-69248913 None:intergenic 35.0%
! GAATCAACAAGATGAGTTGA+AGG + chr7_2:69248900-69248919 None:intergenic 35.0%
! AAATCTGAAGACCCTTTTCA+GGG + chr7_2:69248944-69248963 None:intergenic 35.0%
! AAAATCTGAAGACCCTTTTC+AGG + chr7_2:69248945-69248964 None:intergenic 35.0%
CTGAATATGGTCCTCAAAAT+TGG - chr7_2:69249153-69249172 Msa1072250:three_prime_UTR 35.0%
! GCAATCAAGTTCCAATTTTG+AGG + chr7_2:69249167-69249186 None:intergenic 35.0%
TTGATTGCAGAACATCTTGA+AGG - chr7_2:69249179-69249198 Msa1072250:three_prime_UTR 35.0%
CAGGAAAAAGTTGTAGATTG+AGG - chr7_2:69249550-69249569 Msa1072250:intron 35.0%
GAAAAAGTTGTAGATTGAGG+TGG - chr7_2:69249553-69249572 Msa1072250:intron 35.0%
!! CAAAAAAACCTTTTCTGAGG+AGG - chr7_2:69249602-69249621 Msa1072250:intron 35.0%
AACAGTGTACTGTGTATAGA+AGG - chr7_2:69249757-69249776 Msa1072250:intron 35.0%
GAAAGACTTTCAACAACAAC+TGG + chr7_2:69249789-69249808 None:intergenic 35.0%
AGTTGAGACATTTCCATCAA+TGG + chr7_2:69249871-69249890 None:intergenic 35.0%
! AATTGTAAATGCGAAGGCAT+CGG + chr7_2:69250113-69250132 None:intergenic 35.0%
CATCACAATTGTAAATGCGA+AGG + chr7_2:69250119-69250138 None:intergenic 35.0%
AGACAAATCTAGAGAAAGTG+TGG - chr7_2:69250282-69250301 Msa1072250:intron 35.0%
AGCTTGTAAGAAGAATGAAC+AGG - chr7_2:69250342-69250361 Msa1072250:intron 35.0%
TTGTAAGAAGAATGAACAGG+TGG - chr7_2:69250345-69250364 Msa1072250:intron 35.0%
GCTAAAGCTAATAGATGTAG+TGG - chr7_2:69250372-69250391 Msa1072250:intron 35.0%
AAAGCTAATAGATGTAGTGG+TGG - chr7_2:69250375-69250394 Msa1072250:intron 35.0%
AGGTCCAATATCTCAATTTC+TGG - chr7_2:69250460-69250479 Msa1072250:intron 35.0%
TCTGGTGAAAGTGAAAATGT+TGG - chr7_2:69250478-69250497 Msa1072250:intron 35.0%
AGGAGCTATACAAAGCTAAA+TGG - chr7_2:69250546-69250565 Msa1072250:intron 35.0%
! CAAAGCTAAATGGTTGATAC+AGG - chr7_2:69250556-69250575 Msa1072250:intron 35.0%
! TCATTTTCACCCAACACAAA+CGG + chr7_2:69250626-69250645 None:intergenic 35.0%
CTCATATAGCAGAATACTAG+GGG - chr7_2:69250857-69250876 Msa1072250:CDS 35.0%
! TTGTTATGCTGTGGTACTTT+TGG - chr7_2:69250886-69250905 Msa1072250:CDS 35.0%
!! GAAGCCAAAGTTTTATGACT+TGG - chr7_2:69250923-69250942 Msa1072250:CDS 35.0%
CCATCCAAGTCATAAAACTT+TGG + chr7_2:69250930-69250949 None:intergenic 35.0%
!! CCAAAGTTTTATGACTTGGA+TGG - chr7_2:69250927-69250946 Msa1072250:CDS 35.0%
!! AGTTTTATGACTTGGATGGA+TGG - chr7_2:69250931-69250950 Msa1072250:CDS 35.0%
ACTTCACAGAAGTTCAACAA+TGG - chr7_2:69248837-69248856 Msa1072250:three_prime_UTR 35.0%
! ACAAGATGAGTTGAAGGAAT+AGG + chr7_2:69248894-69248913 None:intergenic 35.0%
! GAATCAACAAGATGAGTTGA+AGG + chr7_2:69248900-69248919 None:intergenic 35.0%
! AAATCTGAAGACCCTTTTCA+GGG + chr7_2:69248944-69248963 None:intergenic 35.0%
! AAAATCTGAAGACCCTTTTC+AGG + chr7_2:69248945-69248964 None:intergenic 35.0%
CTGAATATGGTCCTCAAAAT+TGG - chr7_2:69249153-69249172 Msa1072250:three_prime_UTR 35.0%
! GCAATCAAGTTCCAATTTTG+AGG + chr7_2:69249167-69249186 None:intergenic 35.0%
TTGATTGCAGAACATCTTGA+AGG - chr7_2:69249179-69249198 Msa1072250:three_prime_UTR 35.0%
CAGGAAAAAGTTGTAGATTG+AGG - chr7_2:69249550-69249569 Msa1072250:intron 35.0%
GAAAAAGTTGTAGATTGAGG+TGG - chr7_2:69249553-69249572 Msa1072250:intron 35.0%
!! CAAAAAAACCTTTTCTGAGG+AGG - chr7_2:69249602-69249621 Msa1072250:intron 35.0%
AACAGTGTACTGTGTATAGA+AGG - chr7_2:69249757-69249776 Msa1072250:intron 35.0%
GAAAGACTTTCAACAACAAC+TGG + chr7_2:69249789-69249808 None:intergenic 35.0%
AGTTGAGACATTTCCATCAA+TGG + chr7_2:69249871-69249890 None:intergenic 35.0%
! AATTGTAAATGCGAAGGCAT+CGG + chr7_2:69250113-69250132 None:intergenic 35.0%
CATCACAATTGTAAATGCGA+AGG + chr7_2:69250119-69250138 None:intergenic 35.0%
AGACAAATCTAGAGAAAGTG+TGG - chr7_2:69250282-69250301 Msa1072250:intron 35.0%
AGCTTGTAAGAAGAATGAAC+AGG - chr7_2:69250342-69250361 Msa1072250:intron 35.0%
TTGTAAGAAGAATGAACAGG+TGG - chr7_2:69250345-69250364 Msa1072250:intron 35.0%
GCTAAAGCTAATAGATGTAG+TGG - chr7_2:69250372-69250391 Msa1072250:intron 35.0%
AAAGCTAATAGATGTAGTGG+TGG - chr7_2:69250375-69250394 Msa1072250:intron 35.0%
AGGTCCAATATCTCAATTTC+TGG - chr7_2:69250460-69250479 Msa1072250:intron 35.0%
TCTGGTGAAAGTGAAAATGT+TGG - chr7_2:69250478-69250497 Msa1072250:intron 35.0%
AGGAGCTATACAAAGCTAAA+TGG - chr7_2:69250546-69250565 Msa1072250:intron 35.0%
! CAAAGCTAAATGGTTGATAC+AGG - chr7_2:69250556-69250575 Msa1072250:intron 35.0%
! TCATTTTCACCCAACACAAA+CGG + chr7_2:69250626-69250645 None:intergenic 35.0%
CTCATATAGCAGAATACTAG+GGG - chr7_2:69250857-69250876 Msa1072250:CDS 35.0%
! TTGTTATGCTGTGGTACTTT+TGG - chr7_2:69250886-69250905 Msa1072250:CDS 35.0%
!! GAAGCCAAAGTTTTATGACT+TGG - chr7_2:69250923-69250942 Msa1072250:CDS 35.0%
CCATCCAAGTCATAAAACTT+TGG + chr7_2:69250930-69250949 None:intergenic 35.0%
!! CCAAAGTTTTATGACTTGGA+TGG - chr7_2:69250927-69250946 Msa1072250:CDS 35.0%
!! AGTTTTATGACTTGGATGGA+TGG - chr7_2:69250931-69250950 Msa1072250:CDS 35.0%
GTTGAAGGAATAGGAGCTAA+AGG + chr7_2:69248885-69248904 None:intergenic 40.0%
GTTTGTCAAAGGAAGAGCTT+TGG + chr7_2:69248922-69248941 None:intergenic 40.0%
TCCTTTGACAAACCCTGAAA+AGG - chr7_2:69248929-69248948 Msa1072250:three_prime_UTR 40.0%
CCTTTGACAAACCCTGAAAA+GGG - chr7_2:69248930-69248949 Msa1072250:three_prime_UTR 40.0%
! AAAGCACCCATCTTCTACTT+TGG + chr7_2:69248988-69249007 None:intergenic 40.0%
!! AGCTCTGTTTCTGTGAAAGT+TGG - chr7_2:69249062-69249081 Msa1072250:three_prime_UTR 40.0%
!! TACTCCAAGCTTTGTTCTAG+AGG - chr7_2:69249086-69249105 Msa1072250:three_prime_UTR 40.0%
!! ATGACCTCTAGAACAAAGCT+TGG + chr7_2:69249093-69249112 None:intergenic 40.0%
!! AGCTTTGTTCTAGAGGTCAT+TGG - chr7_2:69249093-69249112 Msa1072250:three_prime_UTR 40.0%
!! AAGGAGCTTGTTGCTGAATA+TGG - chr7_2:69249140-69249159 Msa1072250:three_prime_UTR 40.0%
GAACATCTTGAAGGAAGATC+AGG - chr7_2:69249188-69249207 Msa1072250:three_prime_UTR 40.0%
!! TCATCACTTTGAGACACAAC+AGG + chr7_2:69249314-69249333 None:intergenic 40.0%
CCTTCCTCACATTACAGAAA+TGG + chr7_2:69249482-69249501 None:intergenic 40.0%
CCATTTCTGTAATGTGAGGA+AGG - chr7_2:69249479-69249498 Msa1072250:CDS 40.0%
GAATCATTGGCATGTGATCA+TGG - chr7_2:69249719-69249738 Msa1072250:intron 40.0%
TGATCATGGCTAGAAGACAT+AGG - chr7_2:69249733-69249752 Msa1072250:intron 40.0%
GATCATGGCTAGAAGACATA+GGG - chr7_2:69249734-69249753 Msa1072250:intron 40.0%
ACTATCTCAAGCACCATTGA+TGG - chr7_2:69249855-69249874 Msa1072250:CDS 40.0%
TGAGGACTTAGTTTAGCTGA+AGG + chr7_2:69249915-69249934 None:intergenic 40.0%
TCAAGGCTATGGATCACTAA+TGG - chr7_2:69249971-69249990 Msa1072250:CDS 40.0%
CAAGGCTATGGATCACTAAT+GGG - chr7_2:69249972-69249991 Msa1072250:CDS 40.0%
TGCGGTAAAATGTAGGCAAA+TGG - chr7_2:69250086-69250105 Msa1072250:CDS 40.0%
GCGGTAAAATGTAGGCAAAT+GGG - chr7_2:69250087-69250106 Msa1072250:CDS 40.0%
! GTATGTTTAGAATCACGACG+AGG - chr7_2:69250159-69250178 Msa1072250:CDS 40.0%
! CAAATCTAGAGAAAGTGTGG+TGG - chr7_2:69250285-69250304 Msa1072250:intron 40.0%
TGAGATATTGGACCTATTGG+TGG + chr7_2:69250455-69250474 None:intergenic 40.0%
! TGGTTGATACAGGAAGATCA+TGG - chr7_2:69250566-69250585 Msa1072250:intron 40.0%
! GGTTGATACAGGAAGATCAT+GGG - chr7_2:69250567-69250586 Msa1072250:intron 40.0%
ATACAGGAAGATCATGGGTT+AGG - chr7_2:69250572-69250591 Msa1072250:intron 40.0%
!! ATCATGGGTTAGGAAAGTGA+GGG - chr7_2:69250582-69250601 Msa1072250:intron 40.0%
ATGAGAAACAGTCCAAAACC+AGG + chr7_2:69250842-69250861 None:intergenic 40.0%
GTACCACAGCATAACAAACA+AGG + chr7_2:69250883-69250902 None:intergenic 40.0%
GTTGAAGGAATAGGAGCTAA+AGG + chr7_2:69248885-69248904 None:intergenic 40.0%
GTTTGTCAAAGGAAGAGCTT+TGG + chr7_2:69248922-69248941 None:intergenic 40.0%
TCCTTTGACAAACCCTGAAA+AGG - chr7_2:69248929-69248948 Msa1072250:three_prime_UTR 40.0%
CCTTTGACAAACCCTGAAAA+GGG - chr7_2:69248930-69248949 Msa1072250:three_prime_UTR 40.0%
! AAAGCACCCATCTTCTACTT+TGG + chr7_2:69248988-69249007 None:intergenic 40.0%
!! AGCTCTGTTTCTGTGAAAGT+TGG - chr7_2:69249062-69249081 Msa1072250:three_prime_UTR 40.0%
!! TACTCCAAGCTTTGTTCTAG+AGG - chr7_2:69249086-69249105 Msa1072250:three_prime_UTR 40.0%
!! ATGACCTCTAGAACAAAGCT+TGG + chr7_2:69249093-69249112 None:intergenic 40.0%
!! AGCTTTGTTCTAGAGGTCAT+TGG - chr7_2:69249093-69249112 Msa1072250:three_prime_UTR 40.0%
!! AAGGAGCTTGTTGCTGAATA+TGG - chr7_2:69249140-69249159 Msa1072250:three_prime_UTR 40.0%
GAACATCTTGAAGGAAGATC+AGG - chr7_2:69249188-69249207 Msa1072250:three_prime_UTR 40.0%
!! TCATCACTTTGAGACACAAC+AGG + chr7_2:69249314-69249333 None:intergenic 40.0%
CCTTCCTCACATTACAGAAA+TGG + chr7_2:69249482-69249501 None:intergenic 40.0%
CCATTTCTGTAATGTGAGGA+AGG - chr7_2:69249479-69249498 Msa1072250:CDS 40.0%
GAATCATTGGCATGTGATCA+TGG - chr7_2:69249719-69249738 Msa1072250:intron 40.0%
TGATCATGGCTAGAAGACAT+AGG - chr7_2:69249733-69249752 Msa1072250:intron 40.0%
GATCATGGCTAGAAGACATA+GGG - chr7_2:69249734-69249753 Msa1072250:intron 40.0%
ACTATCTCAAGCACCATTGA+TGG - chr7_2:69249855-69249874 Msa1072250:CDS 40.0%
TGAGGACTTAGTTTAGCTGA+AGG + chr7_2:69249915-69249934 None:intergenic 40.0%
TCAAGGCTATGGATCACTAA+TGG - chr7_2:69249971-69249990 Msa1072250:CDS 40.0%
CAAGGCTATGGATCACTAAT+GGG - chr7_2:69249972-69249991 Msa1072250:CDS 40.0%
TGCGGTAAAATGTAGGCAAA+TGG - chr7_2:69250086-69250105 Msa1072250:CDS 40.0%
GCGGTAAAATGTAGGCAAAT+GGG - chr7_2:69250087-69250106 Msa1072250:CDS 40.0%
! GTATGTTTAGAATCACGACG+AGG - chr7_2:69250159-69250178 Msa1072250:CDS 40.0%
! CAAATCTAGAGAAAGTGTGG+TGG - chr7_2:69250285-69250304 Msa1072250:intron 40.0%
TGAGATATTGGACCTATTGG+TGG + chr7_2:69250455-69250474 None:intergenic 40.0%
! TGGTTGATACAGGAAGATCA+TGG - chr7_2:69250566-69250585 Msa1072250:intron 40.0%
! GGTTGATACAGGAAGATCAT+GGG - chr7_2:69250567-69250586 Msa1072250:intron 40.0%
ATACAGGAAGATCATGGGTT+AGG - chr7_2:69250572-69250591 Msa1072250:intron 40.0%
!! ATCATGGGTTAGGAAAGTGA+GGG - chr7_2:69250582-69250601 Msa1072250:intron 40.0%
ATGAGAAACAGTCCAAAACC+AGG + chr7_2:69250842-69250861 None:intergenic 40.0%
GTACCACAGCATAACAAACA+AGG + chr7_2:69250883-69250902 None:intergenic 40.0%
!! CCCTTTTCAGGGTTTGTCAA+AGG + chr7_2:69248933-69248952 None:intergenic 45.0%
AGTAGAAGATGGGTGCTTTG+AGG - chr7_2:69248989-69249008 Msa1072250:three_prime_UTR 45.0%
CTCTTCTTCCTCCTCAGAAA+AGG + chr7_2:69249613-69249632 None:intergenic 45.0%
!! TTGCTAGACTTTTTCCAGGG+AGG - chr7_2:69249679-69249698 Msa1072250:intron 45.0%
AGGAGTGAGTGAGAGATTAG+TGG + chr7_2:69249895-69249914 None:intergenic 45.0%
GTTCCAGTTGAGAGTCATCA+AGG - chr7_2:69249954-69249973 Msa1072250:CDS 45.0%
! TAGCCTTGATGACTCTCAAC+TGG + chr7_2:69249960-69249979 None:intergenic 45.0%
GTTGAGAGTCATCAAGGCTA+TGG - chr7_2:69249960-69249979 Msa1072250:CDS 45.0%
AGAATCACGACGAGGTTCAA+AGG - chr7_2:69250167-69250186 Msa1072250:CDS 45.0%
! AGAAAGTGTGGTGGCAACTA+GGG - chr7_2:69250294-69250313 Msa1072250:intron 45.0%
CTGAGTCAGTTACCACCAAT+AGG - chr7_2:69250440-69250459 Msa1072250:intron 45.0%
!! GATCATGGGTTAGGAAAGTG+AGG - chr7_2:69250581-69250600 Msa1072250:intron 45.0%
!! CCCTTTTCAGGGTTTGTCAA+AGG + chr7_2:69248933-69248952 None:intergenic 45.0%
AGTAGAAGATGGGTGCTTTG+AGG - chr7_2:69248989-69249008 Msa1072250:three_prime_UTR 45.0%
CTCTTCTTCCTCCTCAGAAA+AGG + chr7_2:69249613-69249632 None:intergenic 45.0%
!! TTGCTAGACTTTTTCCAGGG+AGG - chr7_2:69249679-69249698 Msa1072250:intron 45.0%
AGGAGTGAGTGAGAGATTAG+TGG + chr7_2:69249895-69249914 None:intergenic 45.0%
GTTCCAGTTGAGAGTCATCA+AGG - chr7_2:69249954-69249973 Msa1072250:CDS 45.0%
! TAGCCTTGATGACTCTCAAC+TGG + chr7_2:69249960-69249979 None:intergenic 45.0%
GTTGAGAGTCATCAAGGCTA+TGG - chr7_2:69249960-69249979 Msa1072250:CDS 45.0%
AGAATCACGACGAGGTTCAA+AGG - chr7_2:69250167-69250186 Msa1072250:CDS 45.0%
! AGAAAGTGTGGTGGCAACTA+GGG - chr7_2:69250294-69250313 Msa1072250:intron 45.0%
CTGAGTCAGTTACCACCAAT+AGG - chr7_2:69250440-69250459 Msa1072250:intron 45.0%
!! GATCATGGGTTAGGAAAGTG+AGG - chr7_2:69250581-69250600 Msa1072250:intron 45.0%
!!! TTTAATATTTTCTTAAAAAT+GGG + chr7_2:69249228-69249247 None:intergenic 5.0%
!!! TTTTTAATATTTATAAATTG+GGG - chr7_2:69249432-69249451 Msa1072250:CDS 5.0%
!!! TTTAATATTTTCTTAAAAAT+GGG + chr7_2:69249228-69249247 None:intergenic 5.0%
!!! TTTTTAATATTTATAAATTG+GGG - chr7_2:69249432-69249451 Msa1072250:CDS 5.0%
!! GATGGGTGCTTTGAGGTTCA+AGG - chr7_2:69248996-69249015 Msa1072250:three_prime_UTR 50.0%
ACTGCATTATCTGTCCTCCC+TGG + chr7_2:69249696-69249715 None:intergenic 50.0%
! GAGAAAGTGTGGTGGCAACT+AGG - chr7_2:69250293-69250312 Msa1072250:intron 50.0%
AGTGAGGGTAGTCAGATGCA+AGG - chr7_2:69250597-69250616 Msa1072250:intron 50.0%
GTGAGGGTAGTCAGATGCAA+GGG - chr7_2:69250598-69250617 Msa1072250:intron 50.0%
TGCAAGGGAACCGTTTGTGT+TGG - chr7_2:69250613-69250632 Msa1072250:CDS 50.0%
GCAAGGGAACCGTTTGTGTT+GGG - chr7_2:69250614-69250633 Msa1072250:CDS 50.0%
!! GGGCCTTGTTTGTTATGCTG+TGG - chr7_2:69250877-69250896 Msa1072250:CDS 50.0%
!! GATGGGTGCTTTGAGGTTCA+AGG - chr7_2:69248996-69249015 Msa1072250:three_prime_UTR 50.0%
ACTGCATTATCTGTCCTCCC+TGG + chr7_2:69249696-69249715 None:intergenic 50.0%
! GAGAAAGTGTGGTGGCAACT+AGG - chr7_2:69250293-69250312 Msa1072250:intron 50.0%
AGTGAGGGTAGTCAGATGCA+AGG - chr7_2:69250597-69250616 Msa1072250:intron 50.0%
GTGAGGGTAGTCAGATGCAA+GGG - chr7_2:69250598-69250617 Msa1072250:intron 50.0%
TGCAAGGGAACCGTTTGTGT+TGG - chr7_2:69250613-69250632 Msa1072250:CDS 50.0%
GCAAGGGAACCGTTTGTGTT+GGG - chr7_2:69250614-69250633 Msa1072250:CDS 50.0%
!! GGGCCTTGTTTGTTATGCTG+TGG - chr7_2:69250877-69250896 Msa1072250:CDS 50.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 69248834 69250979 69248834 ID=Msa1072250;Name=Msa1072250
chr7_2 mRNA 69248834 69250979 69248834 ID=Msa1072250-mRNA-1;Parent=Msa1072250;Name=Msa1072250-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.33|1|1|1|3|415|365
chr7_2 exon 69248834 69249529 69248834 ID=Msa1072250-mRNA-1:exon:15359;Parent=Msa1072250-mRNA-1
chr7_2 exon 69249820 69250260 69249820 ID=Msa1072250-mRNA-1:exon:15358;Parent=Msa1072250-mRNA-1
chr7_2 exon 69250604 69250979 69250604 ID=Msa1072250-mRNA-1:exon:15357;Parent=Msa1072250-mRNA-1
chr7_2 CDS 69250604 69250979 69250604 ID=Msa1072250-mRNA-1:cds;Parent=Msa1072250-mRNA-1
chr7_2 CDS 69249820 69250260 69249820 ID=Msa1072250-mRNA-1:cds;Parent=Msa1072250-mRNA-1
chr7_2 CDS 69249249 69249529 69249249 ID=Msa1072250-mRNA-1:cds;Parent=Msa1072250-mRNA-1
chr7_2 three_prime_UTR 69248834 69249248 69248834 ID=Msa1072250-mRNA-1:three_prime_utr;Parent=Msa1072250-mRNA-1
Gene Sequence

>Msa1072250

ATGACTTCACAGAAGTTCAACAATGGTGATATCAATATGAGTCTTTTTCCTTTAGCTCCTATTCCTTCAACTCATCTTGTTGATTCCAAAGCTCTTCCTTTGACAAACCCTGAAAAGGGTCTTCAGATTTTGAGACCCTCAATGTTTAAGTCCAAAGTAGAAGATGGGTGCTTTGAGGTTCAAGGAAAAAACTTGTCTTTGAAACTTGGTAATGAAGTAGAAGATAAAAGCTCTGTTTCTGTGAAAGTTGGATACTCCAAGCTTTGTTCTAGAGGTCATTGGAGACCAATAGAAGATGCTAAACTTAAGGAGCTTGTTGCTGAATATGGTCCTCAAAATTGGAACTTGATTGCAGAACATCTTGAAGGAAGATCAGGAAAAAGTTGTAGATTGAGGTGGTTCAATCAGCTAGACCCAAGAATCAACAAAAAAACCTTTTCTGAGGAGGAAGAAGAGAGACTTTTAGCTGCTCATAAAATGTATGGTAACAAATGGGCTATAATTGCTAGACTTTTTCCAGGGAGGACAGATAATGCAGTGAAGAATCATTGGCATGTGATCATGGCTAGAAGACATAGGGAACAGTGTACTGTGTATAGAAGGAGAAAGCCAGTTGTTGTTGAAAGTCTTTCAAAGGATTTAAAATTAAGTCTTTCAAACAATGCAGCTAGTGATTCAACTATCTCAAGCACCATTGATGGAAATGTCTCAACTTCCACTAATCTCTCACTCACTCCTTCAGCTAAACTAAGTCCTCAACTGTTTGATAAACTAGTTGTTCCAGTTGAGAGTCATCAAGGCTATGGATCACTAATGGACAAATCTAGAGAAAGTGTGGTGGCAACTAGGGATGTGAATTTTGACAAGTATTTTGGAGCTTGTAAGAAGAATGAACAGGTGGAAAAGCTAAAGCTAATAGATGTAGTGGTGGACCAGTCCAATTTTTCAGATTCAAACTCTGAAGTATCAGTATCTGAGTCAGTTACCACCAATAGGTCCAATATCTCAATTTCTGGTGAAAGTGAAAATGTTGGTGTTAAGATTAACATGTTACTACCATTCATTGATTTTCTTGGAGTAGGAGCTATACAAAGCTAA

Protein sequence

>Msa1072250

MTSQKFNNGDINMSLFPLAPIPSTHLVDSKALPLTNPEKGLQILRPSMFKSKVEDGCFEVQGKNLSLKLGNEVEDKSSVSVKVGYSKLCSRGHWRPIEDAKLKELVAEYGPQNWNLIAEHLEGRSGKSCRLRWFNQLDPRINKKTFSEEEEERLLAAHKMYGNKWAIIARLFPGRTDNAVKNHWHVIMARRHREQCTVYRRRKPVVVESLSKDLKLSLSNNAASDSTISSTIDGNVSTSTNLSLTPSAKLSPQLFDKLVVPVESHQGYGSLMDKSRESVVATRDVNFDKYFGACKKNEQVEKLKLIDVVVDQSNFSDSNSEVSVSESVTTNRSNISISGESENVGVKINMLLPFIDFLGVGAIQS*