AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1032470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1032470 MtrunA17_Chr7g0254261 94.247 365 12 2 1 365 1 356 0.0 694
Msa1032470 MtrunA17_Chr6g0460671 49.085 328 133 7 34 361 52 345 7.08e-79 246
Msa1032470 MtrunA17_Chr4g0042501 77.444 133 30 0 71 203 85 217 1.66e-74 236
Msa1032470 MtrunA17_Chr5g0417621 63.804 163 53 1 84 246 127 283 8.88e-71 228
Msa1032470 MtrunA17_Chr3g0125801 42.568 296 140 5 86 365 11 292 1.92e-62 201
Msa1032470 MtrunA17_Chr6g0480581 73.214 112 30 0 88 199 1 112 1.06e-60 195
Msa1032470 MtrunA17_Chr6g0460661 57.143 119 51 0 90 208 15 133 5.33e-46 154
Msa1032470 MtrunA17_Chr4g0008551 59.406 101 41 0 91 191 38 138 4.85e-40 144
Msa1032470 MtrunA17_Chr5g0401731 44.138 145 72 2 91 235 15 150 1.04e-37 138
Msa1032470 MtrunA17_Chr4g0053431 55.446 101 45 0 91 191 5 105 3.25e-37 135
Msa1032470 MtrunA17_Chr3g0133601 56.436 101 44 0 91 191 37 137 1.33e-36 132
Msa1032470 MtrunA17_Chr6g0454921 50.495 101 50 0 91 191 15 115 2.14e-34 125
Msa1032470 MtrunA17_Chr1g0157731 44.444 135 70 2 61 191 58 191 1.11e-32 129
Msa1032470 MtrunA17_Chr3g0139671 42.963 135 72 2 61 191 52 185 1.68e-32 129
Msa1032470 MtrunA17_Chr7g0238631 53.465 101 47 0 91 191 113 213 8.44e-32 125
Msa1032470 MtrunA17_Chr5g0437321 52.632 95 45 0 91 185 19 113 3.17e-31 119
Msa1032470 MtrunA17_Chr5g0429661 41.379 174 97 2 86 258 117 286 3.48e-31 121
Msa1032470 MtrunA17_Chr3g0117511 38.068 176 102 4 91 262 183 355 7.23e-29 116
Msa1032470 MtrunA17_Chr7g0228401 31.538 260 153 6 50 290 236 489 1.41e-26 110
Msa1032470 MtrunA17_Chr4g0058991 40.476 126 75 0 91 216 209 334 1.96e-26 109
Msa1032470 MtrunA17_Chr3g0103281 46.078 102 54 1 91 191 14 115 2.15e-26 107
Msa1032470 MtrunA17_Chr4g0022901 48.039 102 52 1 91 191 15 116 3.12e-26 105
Msa1032470 MtrunA17_Chr5g0397841 52.174 92 44 0 94 185 113 204 3.35e-26 108
Msa1032470 MtrunA17_Chr3g0099131 44.545 110 60 1 91 199 43 152 6.03e-26 108
Msa1032470 MtrunA17_Chr4g0022911 48.039 102 52 1 91 191 15 116 1.06e-25 104
Msa1032470 MtrunA17_Chr7g0228531 49.505 101 50 1 91 191 220 319 1.82e-25 106
Msa1032470 MtrunA17_Chr2g0323351 47.059 102 51 2 91 190 14 114 2.90e-25 102
Msa1032470 MtrunA17_Chr4g0022931 37.500 144 87 2 91 231 15 158 2.96e-25 103
Msa1032470 MtrunA17_Chr1g0203411 43.810 105 58 1 91 194 14 118 4.03e-25 103
Msa1032470 MtrunA17_Chr1g0203441 46.602 103 52 2 91 191 15 116 8.38e-25 102
Msa1032470 MtrunA17_Chr4g0055981 33.918 171 103 5 90 256 56 220 8.87e-25 100
Msa1032470 MtrunA17_Chr5g0417821 45.098 102 55 1 91 191 9 110 1.27e-24 102
Msa1032470 MtrunA17_Chr8g0360111 48.000 100 51 1 91 189 27 126 1.78e-24 100
Msa1032470 MtrunA17_Chr8g0354661 40.602 133 76 2 68 199 18 148 2.73e-24 103
Msa1032470 MtrunA17_Chr2g0311221 48.454 97 49 1 91 186 16 112 3.26e-24 101
Msa1032470 MtrunA17_Chr5g0434911 44.118 102 56 1 91 191 23 124 3.42e-24 100
Msa1032470 MtrunA17_Chr6g0470971 42.718 103 56 2 91 191 16 117 7.62e-24 99.8
Msa1032470 MtrunA17_Chr7g0220341 40.496 121 69 1 74 191 10 130 8.13e-24 99.4
Msa1032470 MtrunA17_Chr3g0115821 43.103 116 58 3 83 191 1 115 9.65e-24 100
Msa1032470 MtrunA17_Chr3g0080861 42.727 110 62 1 91 199 39 148 1.06e-23 102
Msa1032470 MtrunA17_Chr5g0434841 31.364 220 119 5 91 286 22 233 1.44e-23 99.8
Msa1032470 MtrunA17_Chr2g0322521 45.238 126 62 3 76 199 20 140 1.59e-23 100
Msa1032470 MtrunA17_Chr1g0187761 31.111 225 111 6 91 273 14 236 1.66e-23 98.2
Msa1032470 MtrunA17_Chr4g0048511 46.078 102 54 1 91 191 15 116 1.78e-23 100
Msa1032470 MtrunA17_Chr5g0434831 43.137 102 57 1 91 191 9 110 2.59e-23 95.9
Msa1032470 MtrunA17_Chr7g0228991 43.137 102 57 1 91 191 31 132 3.77e-23 97.4
Msa1032470 MtrunA17_Chr1g0193801 39.344 122 73 1 85 205 8 129 3.98e-23 99.4
Msa1032470 MtrunA17_Chr1g0167691 43.137 102 57 1 91 191 14 115 4.50e-23 97.1
Msa1032470 MtrunA17_Chr7g0274581 45.098 102 55 1 91 191 14 115 5.65e-23 95.5
Msa1032470 MtrunA17_Chr7g0270891 38.525 122 74 1 85 205 8 129 6.37e-23 98.6
Msa1032470 MtrunA17_Chr1g0192411 36.765 136 85 1 91 225 14 149 7.00e-23 99.0
Msa1032470 MtrunA17_Chr5g0434931 42.157 102 58 1 91 191 37 138 8.52e-23 96.7
Msa1032470 MtrunA17_Chr4g0022891 37.903 124 69 3 91 212 14 131 1.09e-22 95.5
Msa1032470 MtrunA17_Chr1g0154031 43.636 110 61 1 91 199 78 187 1.16e-22 98.6
Msa1032470 MtrunA17_Chr4g0058631 35.938 128 81 1 91 217 14 141 1.28e-22 97.4
Msa1032470 MtrunA17_Chr3g0117091 39.535 129 73 3 91 215 14 141 1.67e-22 97.1
Msa1032470 MtrunA17_Chr2g0281071 44.118 102 56 1 91 191 15 116 1.70e-22 97.1
Msa1032470 MtrunA17_Chr2g0323411 46.078 102 54 1 91 191 14 115 1.81e-22 96.7
Msa1032470 MtrunA17_Chr6g0452271 43.137 102 57 1 91 191 14 115 1.97e-22 96.7
Msa1032470 MtrunA17_Chr1g0193371 38.211 123 73 2 85 205 8 129 1.98e-22 97.1
Msa1032470 MtrunA17_Chr2g0309911 42.718 103 56 2 91 191 13 114 2.38e-22 95.9
Msa1032470 MtrunA17_Chr7g0228481 48.958 96 48 1 91 186 220 314 2.49e-22 97.4
Msa1032470 MtrunA17_Chr1g0211161 38.983 118 69 2 91 206 15 131 5.56e-22 93.2
Msa1032470 MtrunA17_Chr4g0037141 32.934 167 102 4 83 240 1 166 6.37e-22 94.4
Msa1032470 MtrunA17_Chr5g0435101 41.748 103 59 1 90 191 12 114 7.69e-22 92.4
Msa1032470 MtrunA17_Chr8g0342541 40.517 116 61 3 83 191 1 115 8.31e-22 95.1
Msa1032470 MtrunA17_Chr5g0397231 42.593 108 56 2 83 184 1 108 8.68e-22 94.7
Msa1032470 MtrunA17_Chr1g0209661 40.000 105 62 1 91 194 29 133 1.36e-21 94.0
Msa1032470 MtrunA17_Chr5g0400821 41.071 112 59 3 91 195 14 125 1.38e-21 94.0
Msa1032470 MtrunA17_Chr4g0070611 39.130 115 64 2 83 191 1 115 1.42e-21 93.6
Msa1032470 MtrunA17_Chr2g0330041 43.119 109 54 3 83 184 1 108 1.42e-21 95.1
Msa1032470 MtrunA17_Chr2g0328771 43.689 103 55 2 91 191 22 123 1.58e-21 94.0
Msa1032470 MtrunA17_Chr4g0032401 42.157 102 58 1 91 191 19 120 1.60e-21 94.0
Msa1032470 MtrunA17_Chr4g0030881 40.678 118 59 3 87 195 5 120 1.87e-21 92.4
Msa1032470 MtrunA17_Chr2g0327821 34.615 156 90 4 91 244 8 153 1.91e-21 92.0
Msa1032470 MtrunA17_Chr1g0180391 37.162 148 80 4 91 230 21 163 2.36e-21 91.7
Msa1032470 MtrunA17_Chr4g0070641 39.130 115 64 2 83 191 1 115 2.52e-21 89.7
Msa1032470 MtrunA17_Chr5g0410961 39.130 115 64 2 83 191 1 115 2.68e-21 93.6
Msa1032470 MtrunA17_Chr5g0395281 43.689 103 55 2 91 191 14 115 2.90e-21 92.8
Msa1032470 MtrunA17_Chr7g0228891 42.718 103 56 2 91 191 14 115 3.09e-21 92.0
Msa1032470 MtrunA17_Chr8g0385321 38.261 115 65 2 83 191 1 115 3.40e-21 92.8
Msa1032470 MtrunA17_Chr8g0342521 39.655 116 62 3 83 191 1 115 3.55e-21 93.2
Msa1032470 MtrunA17_Chr1g0151941 42.718 103 57 2 91 191 14 116 4.04e-21 91.3
Msa1032470 MtrunA17_Chr7g0261281 42.718 103 56 2 91 191 14 115 4.38e-21 91.7
Msa1032470 MtrunA17_Chr7g0217221 40.196 102 60 1 91 191 14 115 4.47e-21 91.7
Msa1032470 MtrunA17_Chr7g0271241 42.718 103 56 2 85 185 8 109 4.52e-21 93.6
Msa1032470 MtrunA17_Chr1g0177901 49.398 83 42 0 102 184 5 87 6.03e-21 89.7
Msa1032470 MtrunA17_Chr5g0441131 40.000 110 62 4 91 198 11 118 6.17e-21 89.4
Msa1032470 MtrunA17_Chr8g0387421 40.566 106 62 1 91 195 14 119 6.18e-21 92.0
Msa1032470 MtrunA17_Chr4g0028311 43.269 104 55 3 91 191 14 116 6.52e-21 92.0
Msa1032470 MtrunA17_Chr3g0135311 38.655 119 67 3 91 203 14 132 6.73e-21 92.4
Msa1032470 MtrunA17_Chr8g0342481 41.026 117 60 4 83 191 1 116 7.69e-21 93.2
Msa1032470 MtrunA17_Chr1g0194301 31.696 224 128 9 66 273 15 229 1.11e-20 90.9
Msa1032470 MtrunA17_Chr8g0334881 45.714 105 55 2 91 193 12 116 1.16e-20 91.3
Msa1032470 MtrunA17_Chr7g0275911 36.134 119 70 2 83 195 1 119 1.22e-20 90.1
Msa1032470 MtrunA17_Chr4g0022881 41.237 97 54 2 91 185 14 109 1.23e-20 89.7
Msa1032470 MtrunA17_Chr1g0167661 41.176 102 59 1 91 191 14 115 1.24e-20 90.1
Msa1032470 MtrunA17_Chr7g0240821 43.000 100 54 2 94 191 6 104 1.45e-20 89.4
Msa1032470 MtrunA17_Chr8g0346561 36.220 127 73 3 76 198 3 125 1.50e-20 90.9
Msa1032470 MtrunA17_Chr8g0343831 37.500 112 69 1 87 197 6 117 1.71e-20 89.7
Msa1032470 MtrunA17_Chr1g0186061 41.905 105 58 2 91 193 22 125 1.75e-20 89.7
Msa1032470 MtrunA17_Chr3g0088461 42.727 110 61 2 83 191 17 125 1.94e-20 91.3
Msa1032470 MtrunA17_Chr4g0042671 41.026 117 64 2 76 191 3 115 2.16e-20 91.7
Msa1032470 MtrunA17_Chr4g0054391 44.330 97 52 2 91 185 14 110 2.19e-20 90.1
Msa1032470 MtrunA17_Chr3g0121241 37.069 116 72 1 91 205 44 159 2.31e-20 90.1
Msa1032470 MtrunA17_Chr3g0131121 31.818 176 92 6 83 250 1 156 2.34e-20 90.1
Msa1032470 MtrunA17_Chr4g0039971 41.748 103 57 2 91 191 15 116 2.63e-20 90.9
Msa1032470 MtrunA17_Chr7g0233061 41.379 116 57 3 71 186 169 273 3.06e-20 90.9
Msa1032470 MtrunA17_Chr1g0152011 40.777 103 59 2 91 191 14 116 3.14e-20 90.5
Msa1032470 MtrunA17_Chr6g0453471 41.026 117 64 2 76 191 3 115 3.30e-20 90.5
Msa1032470 MtrunA17_Chr7g0264641 39.655 116 63 3 83 191 1 116 3.39e-20 89.4
Msa1032470 MtrunA17_Chr7g0228231 26.882 186 122 2 91 275 16 188 3.44e-20 87.8
Msa1032470 MtrunA17_Chr2g0327351 44.898 98 52 2 91 186 14 111 3.48e-20 90.1
Msa1032470 MtrunA17_Chr6g0453211 41.237 97 56 1 91 186 14 110 3.60e-20 90.1
Msa1032470 MtrunA17_Chr5g0440781 42.857 98 54 2 91 186 14 111 4.31e-20 87.0
Msa1032470 MtrunA17_Chr4g0044421 40.541 111 59 3 76 184 3 108 4.86e-20 87.0
Msa1032470 MtrunA17_Chr5g0440761 41.905 105 56 3 91 193 14 115 6.43e-20 88.2
Msa1032470 MtrunA17_Chr7g0254411 40.541 111 61 2 82 191 9 115 7.25e-20 89.4
Msa1032470 MtrunA17_Chr5g0441141 42.857 98 54 2 91 186 14 111 8.22e-20 88.2
Msa1032470 MtrunA17_Chr4g0060721 39.216 102 61 1 91 191 15 116 1.31e-19 88.6
Msa1032470 MtrunA17_Chr4g0013361 44.643 112 57 3 84 193 8 116 1.33e-19 88.2
Msa1032470 MtrunA17_Chr7g0217741 40.678 118 63 3 76 191 3 115 1.55e-19 88.2
Msa1032470 MtrunA17_Chr1g0194951 37.288 118 67 3 76 191 3 115 1.77e-19 88.6
Msa1032470 MtrunA17_Chr3g0092401 39.216 102 61 1 91 191 15 116 1.91e-19 87.8
Msa1032470 MtrunA17_Chr1g0168661 43.000 100 54 2 87 184 19 117 4.24e-19 85.9
Msa1032470 MtrunA17_Chr4g0072751 42.857 98 54 2 91 186 14 111 9.40e-19 86.3
Msa1032470 MtrunA17_Chr7g0238651 38.393 112 66 1 86 194 2 113 9.86e-19 86.3
Msa1032470 MtrunA17_Chr5g0434571 28.910 211 122 5 38 238 14 206 1.40e-18 85.9
Msa1032470 MtrunA17_Chr4g0068921 42.268 97 55 1 91 186 26 122 3.29e-18 82.0
Msa1032470 MtrunA17_Chr3g0110351 41.071 112 59 3 82 191 9 115 3.56e-18 84.3
Msa1032470 MtrunA17_Chr5g0434901 53.226 62 29 0 124 185 9 70 4.15e-18 79.3
Msa1032470 MtrunA17_Chr1g0194291 37.273 110 67 2 91 198 23 132 4.80e-18 83.2
Msa1032470 MtrunA17_Chr2g0293911 39.091 110 65 2 91 198 26 135 5.20e-18 84.0
Msa1032470 MtrunA17_Chr4g0068061 35.043 117 71 2 76 191 3 115 8.21e-18 83.6
Msa1032470 MtrunA17_Chr4g0057031 39.806 103 59 2 91 191 14 115 8.69e-18 82.4
Msa1032470 MtrunA17_Chr6g0450101 41.053 95 55 1 91 184 16 110 1.32e-17 80.5
Msa1032470 MtrunA17_Chr7g0247131 43.373 83 47 0 124 206 14 96 1.46e-17 81.6
Msa1032470 MtrunA17_Chr8g0349261 41.346 104 57 3 91 191 15 117 1.56e-17 82.0
Msa1032470 MtrunA17_Chr5g0416341 31.250 144 77 2 94 228 29 159 1.99e-17 83.6
Msa1032470 MtrunA17_Chr7g0229101 30.625 160 84 3 124 256 8 167 3.14e-17 79.3
Msa1032470 MtrunA17_Chr8g0362231 35.714 98 63 0 94 191 25 122 6.24e-17 81.6
Msa1032470 MtrunA17_Chr3g0099141 43.902 82 45 1 91 171 42 123 4.52e-16 74.3
Msa1032470 MtrunA17_Chr6g0487491 38.393 112 59 3 91 192 14 125 1.15e-15 76.3
Msa1032470 MtrunA17_Chr7g0229131 33.065 124 77 2 120 237 2 125 1.19e-15 74.3
Msa1032470 MtrunA17_Chr5g0425591 45.122 82 41 3 91 169 11 91 1.90e-15 71.2
Msa1032470 MtrunA17_Chr3g0093811 46.377 69 35 2 124 191 18 85 1.92e-14 72.8
Msa1032470 MtrunA17_Chr7g0269831 36.752 117 69 2 76 191 3 115 3.35e-14 73.2
Msa1032470 MtrunA17_Chr6g0483051 37.363 91 56 1 94 184 72 161 3.63e-14 73.9
Msa1032470 MtrunA17_Chr2g0323321 41.250 80 44 2 91 168 13 91 7.10e-14 67.4
Msa1032470 MtrunA17_Chr4g0042611 41.333 75 43 1 91 164 14 88 3.23e-13 64.7
Msa1032470 MtrunA17_Chr5g0395221 42.667 75 42 1 91 164 14 88 1.30e-12 63.2
Msa1032470 MtrunA17_Chr8g0342511 38.636 88 46 3 83 163 1 87 2.36e-12 62.8
Msa1032470 MtrunA17_Chr8g0342531 40.260 77 43 2 91 165 14 89 6.16e-12 63.5
Msa1032470 MtrunA17_Chr7g0274481 40.000 85 50 1 92 176 8 91 8.60e-12 66.6
Msa1032470 MtrunA17_Chr3g0104491 50.000 52 26 0 141 192 17 68 1.69e-11 64.3
Msa1032470 MtrunA17_Chr5g0421201 50.000 50 25 0 143 192 12 61 2.15e-11 62.4
Msa1032470 MtrunA17_Chr6g0453751 41.573 89 42 4 91 169 22 110 2.19e-11 60.8
Msa1032470 MtrunA17_Chr7g0233151 46.154 52 28 0 141 192 1 52 2.75e-11 61.6
Msa1032470 MtrunA17_Chr8g0342461 41.026 78 42 3 91 165 14 90 2.80e-11 60.8
Msa1032470 MtrunA17_Chr3g0104501 54.902 51 23 0 91 141 133 183 4.66e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1032470 AT5G17800.1 43.158 285 104 6 86 362 88 322 2.11e-71 226
Msa1032470 AT1G69560.1 46.739 276 94 9 90 363 106 330 1.97e-69 221
Msa1032470 AT1G69560.2 46.739 276 94 9 90 363 122 346 2.34e-69 221
Msa1032470 AT1G26780.1 77.586 116 26 0 88 203 95 210 3.02e-66 211
Msa1032470 AT1G26780.2 77.586 116 26 0 88 203 95 210 1.03e-65 212
Msa1032470 AT1G17950.1 75.926 108 26 0 88 195 2 109 7.64e-61 196
Msa1032470 AT3G29020.1 71.795 117 33 0 86 202 60 176 1.12e-60 195
Msa1032470 AT3G29020.2 71.795 117 33 0 86 202 62 178 5.16e-60 196
Msa1032470 AT4G33450.1 76.415 106 25 0 89 194 17 122 2.91e-58 189
Msa1032470 AT1G73410.1 43.636 275 116 8 88 361 3 239 3.55e-58 189
Msa1032470 AT1G73410.2 79.439 107 22 0 88 194 3 109 5.43e-57 185
Msa1032470 AT5G39700.1 64.423 104 37 0 92 195 57 160 4.68e-43 148
Msa1032470 AT5G67300.1 43.713 167 80 4 91 250 6 165 4.81e-38 139
Msa1032470 AT4G37260.1 41.875 160 78 3 91 248 13 159 2.26e-37 137
Msa1032470 AT3G55730.1 54.808 104 47 0 91 194 56 159 2.24e-36 136
Msa1032470 AT2G39880.1 54.464 112 49 1 84 195 45 154 3.85e-36 135
Msa1032470 AT2G23290.1 53.465 101 47 0 91 191 13 113 2.77e-35 131
Msa1032470 AT3G50060.1 53.465 101 47 0 91 191 6 106 6.99e-35 130
Msa1032470 AT3G09230.1 54.455 101 46 0 91 191 55 155 1.71e-34 131
Msa1032470 AT3G09370.1 52.475 101 48 0 91 191 130 230 1.56e-31 125
Msa1032470 AT3G09370.2 52.475 101 48 0 91 191 135 235 1.58e-31 125
Msa1032470 AT3G09370.3 52.475 101 48 0 91 191 143 243 2.33e-31 124
Msa1032470 AT5G02320.1 52.475 101 48 0 91 191 127 227 3.62e-31 124
Msa1032470 AT5G02320.2 52.475 101 48 0 91 191 127 227 3.62e-31 124
Msa1032470 AT5G02320.3 52.475 101 48 0 91 191 67 167 4.15e-31 123
Msa1032470 AT4G32730.1 41.481 135 74 2 61 191 54 187 1.49e-30 123
Msa1032470 AT4G32730.5 41.481 135 74 2 61 191 54 187 1.51e-30 123
Msa1032470 AT4G32730.4 41.481 135 74 2 61 191 54 187 1.51e-30 123
Msa1032470 AT4G32730.3 41.481 135 74 2 61 191 54 187 1.51e-30 123
Msa1032470 AT4G32730.2 41.481 135 74 2 61 191 54 187 1.51e-30 123
Msa1032470 AT5G11510.3 40.000 135 76 2 61 191 48 181 6.27e-30 121
Msa1032470 AT5G11510.1 40.000 135 76 2 61 191 48 181 6.27e-30 121
Msa1032470 AT5G11510.4 40.000 135 76 2 61 191 48 181 6.27e-30 121
Msa1032470 AT5G11510.2 40.000 135 76 2 61 191 48 181 7.29e-30 121
Msa1032470 AT5G11510.5 40.000 135 76 2 61 191 48 181 8.13e-30 121
Msa1032470 AT5G11050.1 35.644 202 93 5 91 290 105 271 9.07e-30 119
Msa1032470 AT5G58850.1 46.043 139 65 2 63 191 67 205 1.08e-29 119
Msa1032470 AT5G40360.1 40.000 150 87 2 46 192 110 259 1.82e-28 114
Msa1032470 AT3G27785.1 50.000 102 51 0 91 192 189 290 2.02e-27 112
Msa1032470 AT2G25230.1 49.495 99 48 2 93 190 28 125 4.41e-27 107
Msa1032470 AT4G18770.1 42.857 126 72 0 91 216 217 342 5.15e-27 111
Msa1032470 AT3G11440.2 42.735 117 66 1 84 199 36 152 2.53e-26 109
Msa1032470 AT3G11440.3 42.735 117 66 1 84 199 36 152 3.57e-26 110
Msa1032470 AT3G11440.4 42.735 117 66 1 84 199 36 152 3.57e-26 110
Msa1032470 AT3G11440.1 42.735 117 66 1 84 199 36 152 3.57e-26 110
Msa1032470 AT3G48920.1 41.463 123 69 2 91 210 20 142 6.79e-26 105
Msa1032470 AT1G79180.1 46.602 103 52 2 91 191 16 117 4.33e-25 103
Msa1032470 AT2G32460.1 45.045 111 58 2 91 199 20 129 5.61e-25 106
Msa1032470 AT2G32460.2 45.045 111 58 2 91 199 8 117 5.71e-25 105
Msa1032470 AT4G28110.1 43.478 115 59 2 83 191 1 115 6.69e-25 102
Msa1032470 AT5G40330.1 43.137 102 57 1 91 191 14 115 7.54e-25 101
Msa1032470 AT5G06100.1 43.636 110 61 1 91 199 34 143 1.36e-24 104
Msa1032470 AT4G25560.1 43.363 113 61 2 81 191 2 113 1.50e-24 102
Msa1032470 AT4G26930.1 43.636 110 61 1 91 199 21 130 1.62e-24 103
Msa1032470 AT5G14750.1 43.137 102 57 1 91 191 18 119 1.63e-24 99.8
Msa1032470 AT3G27920.1 44.118 102 56 1 91 191 16 117 1.63e-24 100
Msa1032470 AT5G06100.5 43.636 110 61 1 91 199 34 143 1.67e-24 105
Msa1032470 AT5G06100.2 43.636 110 61 1 91 199 34 143 1.67e-24 105
Msa1032470 AT5G06100.3 43.636 110 61 1 91 199 34 143 1.67e-24 105
Msa1032470 AT5G06100.4 43.636 110 61 1 91 199 34 143 1.67e-24 105
Msa1032470 AT2G26950.1 43.103 116 54 3 83 193 10 118 1.81e-24 103
Msa1032470 AT3G23250.1 34.637 179 109 3 91 268 14 185 1.94e-24 101
Msa1032470 AT5G40430.1 36.774 155 82 3 46 190 4 152 2.05e-24 100
Msa1032470 AT1G63910.1 39.695 131 73 2 83 207 1 131 3.80e-24 102
Msa1032470 AT3G12720.1 45.631 103 53 2 91 191 24 125 3.92e-24 101
Msa1032470 AT1G18570.1 44.118 102 56 1 91 191 15 116 5.49e-24 101
Msa1032470 AT5G56110.1 46.078 102 54 1 91 191 14 115 8.18e-24 100
Msa1032470 AT5G61420.2 39.007 141 84 2 91 229 14 154 2.34e-23 100
Msa1032470 AT3G28470.1 48.454 97 49 1 91 186 14 110 2.48e-23 99.4
Msa1032470 AT1G74080.1 35.802 162 97 3 91 250 14 170 2.63e-23 99.4
Msa1032470 AT1G56160.1 44.660 103 54 2 91 191 16 117 2.85e-23 98.6
Msa1032470 AT2G31180.1 44.118 102 56 1 91 191 14 115 3.20e-23 97.4
Msa1032470 AT4G05100.1 42.241 116 60 2 83 191 1 116 3.67e-23 99.0
Msa1032470 AT5G54230.1 43.137 102 57 1 91 191 14 115 5.48e-23 98.2
Msa1032470 AT5G65230.1 45.631 103 53 2 91 191 14 115 6.00e-23 98.2
Msa1032470 AT5G07700.1 37.736 159 91 3 91 242 14 171 6.09e-23 98.6
Msa1032470 AT5G07700.2 37.736 159 91 3 91 242 14 171 6.09e-23 98.6
Msa1032470 AT1G09540.1 38.462 143 84 3 85 224 8 149 6.80e-23 99.0
Msa1032470 AT2G26960.1 43.243 111 62 1 90 199 21 131 1.03e-22 99.0
Msa1032470 AT5G10280.1 44.660 103 54 2 91 191 14 115 1.14e-22 97.8
Msa1032470 AT3G12820.1 44.660 103 54 2 91 191 16 117 1.17e-22 95.9
Msa1032470 AT5G62470.1 41.584 101 59 0 91 191 14 114 1.18e-22 97.8
Msa1032470 AT5G60890.1 39.655 116 69 1 91 205 14 129 1.29e-22 96.7
Msa1032470 AT3G13890.2 33.158 190 117 5 83 262 1 190 1.34e-22 97.8
Msa1032470 AT1G74430.1 37.600 125 77 1 91 214 14 138 1.37e-22 96.3
Msa1032470 AT4G00540.2 46.154 104 53 1 91 191 103 206 1.54e-22 98.2
Msa1032470 AT5G52600.1 44.118 102 56 1 91 191 14 115 1.63e-22 94.4
Msa1032470 AT1G16490.1 44.660 103 54 2 91 191 16 117 1.63e-22 96.3
Msa1032470 AT3G30210.1 40.000 125 69 2 89 212 27 146 2.02e-22 95.9
Msa1032470 AT4G17785.1 42.735 117 58 3 83 191 1 116 2.67e-22 97.1
Msa1032470 AT4G17785.2 42.735 117 58 3 83 191 1 116 2.76e-22 97.1
Msa1032470 AT4G00540.1 46.154 104 53 1 91 191 101 204 3.05e-22 97.8
Msa1032470 AT5G52260.1 48.544 103 50 2 91 191 14 115 3.75e-22 95.1
Msa1032470 AT5G55020.1 41.818 110 63 1 91 199 28 137 4.46e-22 97.8
Msa1032470 AT1G22640.1 28.906 256 147 7 83 304 1 255 5.10e-22 94.4
Msa1032470 AT1G57560.2 34.302 172 108 3 85 252 8 178 6.39e-22 94.4
Msa1032470 AT5G26660.1 34.615 156 95 3 91 240 14 168 6.57e-22 95.9
Msa1032470 AT3G47600.1 42.157 102 58 1 91 191 14 115 8.18e-22 95.1
Msa1032470 AT4G38620.1 35.252 139 84 2 83 215 1 139 8.28e-22 94.4
Msa1032470 AT3G13890.1 32.161 199 116 6 83 262 1 199 1.01e-21 95.5
Msa1032470 AT5G57620.1 43.689 103 56 2 91 191 14 116 1.23e-21 94.7
Msa1032470 AT5G07690.1 39.516 124 69 2 91 213 14 132 1.46e-21 94.7
Msa1032470 AT4G01680.3 39.091 110 66 1 85 193 8 117 1.57e-21 92.8
Msa1032470 AT1G35515.1 36.522 115 67 2 83 191 1 115 1.64e-21 92.0
Msa1032470 AT3G02940.2 39.130 115 64 2 83 191 1 115 1.73e-21 94.0
Msa1032470 AT3G53200.1 42.056 107 59 2 91 195 11 116 1.86e-21 92.4
Msa1032470 AT5G16770.4 39.130 115 64 2 83 191 1 115 2.14e-21 94.0
Msa1032470 AT5G16770.3 39.130 115 64 2 83 191 1 115 2.14e-21 94.0
Msa1032470 AT1G79180.2 37.037 135 51 2 91 191 16 150 2.18e-21 94.0
Msa1032470 AT4G21440.1 43.137 102 57 1 91 191 14 115 2.24e-21 94.4
Msa1032470 AT5G35550.1 31.034 203 113 6 90 289 15 193 2.28e-21 92.4
Msa1032470 AT5G23000.1 43.269 104 55 2 91 191 14 116 2.59e-21 94.0
Msa1032470 AT3G02940.1 39.130 115 64 2 83 191 1 115 2.72e-21 93.6
Msa1032470 AT3G02940.3 39.130 115 64 2 83 191 1 115 2.72e-21 93.6
Msa1032470 AT5G16770.1 39.130 115 64 2 83 191 1 115 2.98e-21 93.6
Msa1032470 AT5G16770.2 39.130 115 64 2 83 191 1 115 2.98e-21 93.6
Msa1032470 AT1G34670.1 40.000 115 63 2 83 191 1 115 3.12e-21 94.0
Msa1032470 AT5G62470.2 41.176 102 59 1 91 191 14 115 3.83e-21 93.6
Msa1032470 AT4G01680.1 39.091 110 66 1 85 193 8 117 4.32e-21 93.2
Msa1032470 AT1G66370.1 37.963 108 66 1 91 197 10 117 5.04e-21 91.3
Msa1032470 AT5G15310.1 37.415 147 83 3 83 223 1 144 5.34e-21 92.8
Msa1032470 AT4G09460.1 31.609 174 103 3 83 240 1 174 5.49e-21 90.9
Msa1032470 AT1G06180.1 41.026 117 61 4 82 195 9 120 5.56e-21 91.3
Msa1032470 AT5G15310.2 37.415 147 83 3 83 223 1 144 6.18e-21 92.4
Msa1032470 AT3G49690.1 43.689 103 56 2 91 191 14 116 8.61e-21 92.0
Msa1032470 AT3G01140.2 39.130 115 64 2 83 191 1 115 1.06e-20 92.4
Msa1032470 AT5G12870.1 41.176 102 59 1 91 191 20 121 1.10e-20 91.3
Msa1032470 AT3G01140.1 32.653 147 84 3 46 191 26 158 1.37e-20 92.4
Msa1032470 AT3G46130.1 41.121 107 60 2 91 195 11 116 1.45e-20 90.5
Msa1032470 AT1G57560.1 35.172 145 89 3 85 227 8 149 1.49e-20 91.3
Msa1032470 AT5G14750.3 48.529 68 35 0 124 191 18 85 1.73e-20 87.8
Msa1032470 AT5G59780.3 40.187 107 61 2 91 195 10 115 1.75e-20 89.7
Msa1032470 AT5G14340.1 36.667 120 68 3 81 193 11 129 1.78e-20 90.5
Msa1032470 AT5G15310.4 39.130 115 64 2 83 191 1 115 1.99e-20 89.7
Msa1032470 AT1G18710.1 40.196 102 60 1 91 191 14 115 2.15e-20 90.1
Msa1032470 AT3G60460.1 45.714 105 55 2 91 193 13 117 2.19e-20 90.5
Msa1032470 AT5G65790.1 42.718 103 57 2 91 191 14 116 3.33e-20 91.3
Msa1032470 AT3G08500.1 42.157 102 58 1 91 191 32 133 3.80e-20 90.9
Msa1032470 AT2G47190.1 40.000 110 64 2 91 198 22 131 3.94e-20 89.4
Msa1032470 AT1G25340.2 38.462 104 60 1 91 194 20 119 5.97e-20 89.0
Msa1032470 AT1G66380.1 37.600 125 77 1 84 207 3 127 6.15e-20 85.5
Msa1032470 AT4G01680.2 37.705 122 63 2 85 193 8 129 6.97e-20 90.1
Msa1032470 AT1G25340.3 38.462 104 60 1 91 194 20 119 7.80e-20 89.4
Msa1032470 AT3G28910.1 40.196 102 60 1 91 191 14 115 8.61e-20 89.4
Msa1032470 AT1G25340.1 38.095 105 64 1 91 194 20 124 9.30e-20 88.6
Msa1032470 AT2G16720.1 37.069 116 65 3 83 191 1 115 9.33e-20 88.2
Msa1032470 AT4G34990.1 37.391 115 66 2 83 191 1 115 1.02e-19 88.2
Msa1032470 AT3G61250.1 37.594 133 76 3 82 212 9 136 1.10e-19 88.6
Msa1032470 AT1G56650.1 30.636 173 112 3 84 255 3 168 1.48e-19 87.4
Msa1032470 AT3G13540.1 31.481 162 101 3 91 242 25 186 1.55e-19 87.4
Msa1032470 AT1G68320.1 39.623 106 61 2 91 194 21 125 1.56e-19 88.2
Msa1032470 AT1G66230.1 33.939 165 100 5 82 242 9 168 1.89e-19 87.8
Msa1032470 AT5G16600.1 37.594 133 76 3 82 212 9 136 2.08e-19 88.2
Msa1032470 AT1G74650.1 38.235 102 62 1 91 191 14 115 3.24e-19 87.8
Msa1032470 AT2G02820.1 33.884 121 80 0 94 214 33 153 3.40e-19 89.0
Msa1032470 AT2G02820.3 33.884 121 80 0 94 214 33 153 4.19e-19 87.4
Msa1032470 AT2G02820.2 33.884 121 80 0 94 214 33 153 4.60e-19 89.0
Msa1032470 AT2G36890.1 42.308 104 56 3 91 191 14 116 7.20e-19 86.3
Msa1032470 AT1G08810.1 34.014 147 94 2 91 234 14 160 7.31e-19 85.9
Msa1032470 AT2G36890.2 42.308 104 56 3 91 191 55 157 7.68e-19 87.0
Msa1032470 AT3G12820.2 51.471 68 33 0 124 191 2 69 7.68e-19 84.0
Msa1032470 AT5G49620.1 40.000 110 64 2 91 198 28 137 8.61e-19 86.3
Msa1032470 AT3G24310.1 44.792 96 50 2 91 184 20 114 9.68e-19 85.5
Msa1032470 AT4G13480.1 43.000 100 54 2 87 184 4 102 1.06e-18 85.1
Msa1032470 AT3G53200.2 48.611 72 37 0 124 195 12 83 1.37e-18 83.6
Msa1032470 AT1G48000.1 43.158 95 53 1 91 184 34 128 1.53e-18 84.3
Msa1032470 AT5G35550.2 46.154 78 40 1 116 191 43 120 2.02e-18 84.3
Msa1032470 AT5G40350.1 41.053 95 55 1 91 184 19 113 2.92e-18 82.8
Msa1032470 AT4G12350.1 38.679 106 62 2 88 191 11 115 3.44e-18 84.3
Msa1032470 AT3G27810.1 41.053 95 55 1 91 184 22 116 5.96e-18 82.4
Msa1032470 AT3G01530.1 40.196 102 58 2 91 190 27 127 9.38e-18 81.3
Msa1032470 AT4G22680.1 40.777 103 58 2 91 191 14 115 1.06e-17 82.4
Msa1032470 AT1G14350.2 34.951 103 67 0 94 196 28 130 1.15e-17 84.3
Msa1032470 AT1G14350.1 34.951 103 67 0 94 196 28 130 1.15e-17 84.3
Msa1032470 AT5G26660.2 35.537 121 74 1 124 240 17 137 1.16e-17 83.2
Msa1032470 AT3G06490.1 39.091 110 65 2 91 198 21 130 1.27e-17 83.2
Msa1032470 AT2G47460.1 35.556 135 77 3 91 224 14 139 1.44e-17 83.6
Msa1032470 AT4G37780.1 37.864 103 62 2 91 191 14 116 1.60e-17 82.8
Msa1032470 AT5G49330.1 37.864 103 61 2 91 191 14 115 3.32e-17 82.0
Msa1032470 AT5G59780.2 45.833 72 39 0 124 195 23 94 4.08e-17 79.7
Msa1032470 AT2G37630.1 33.571 140 83 2 91 220 4 143 5.98e-17 81.6
Msa1032470 AT3G46130.3 43.210 81 44 1 117 195 4 84 6.14e-17 79.3
Msa1032470 AT1G66390.1 40.000 110 65 1 84 192 3 112 6.26e-17 80.1
Msa1032470 AT3G46130.4 45.833 72 39 0 124 195 23 94 8.38e-17 79.3
Msa1032470 AT3G62610.1 35.043 117 71 2 76 191 3 115 1.43e-16 80.5
Msa1032470 AT3G18100.1 38.298 94 58 0 91 184 546 639 2.49e-16 81.3
Msa1032470 AT3G18100.1 33.684 95 61 2 91 184 495 588 8.14e-11 63.9
Msa1032470 AT3G18100.3 38.298 94 58 0 91 184 498 591 2.84e-16 80.9
Msa1032470 AT3G18100.3 33.684 95 61 2 91 184 447 540 8.79e-11 63.9
Msa1032470 AT3G18100.4 38.298 94 58 0 91 184 385 478 3.96e-16 80.5
Msa1032470 AT3G18100.2 38.298 94 58 0 91 184 333 426 4.74e-16 80.1
Msa1032470 AT1G66380.3 43.373 83 47 0 124 206 11 93 7.75e-16 73.2
Msa1032470 AT5G40350.2 47.541 61 32 0 124 184 8 68 1.32e-15 74.3
Msa1032470 AT5G49620.2 35.484 124 64 3 91 198 28 151 1.83e-15 77.0
Msa1032470 AT3G27810.2 47.541 61 32 0 124 184 7 67 2.85e-15 73.6
Msa1032470 AT5G62320.1 38.182 110 58 3 91 191 15 123 4.31e-15 74.7
Msa1032470 AT3G47600.2 45.588 68 37 0 124 191 42 109 8.16e-15 75.1
Msa1032470 AT1G71030.2 41.538 65 38 0 127 191 5 69 1.25e-13 68.9
Msa1032470 AT1G71030.1 41.538 65 38 0 127 191 19 83 1.59e-13 68.9
Msa1032470 AT5G14750.4 41.379 58 34 0 134 191 1 58 5.95e-13 66.2
Msa1032470 AT5G14750.2 41.379 58 34 0 134 191 1 58 5.95e-13 66.2
Msa1032470 AT3G23250.2 31.852 135 85 2 134 268 1 128 2.76e-12 66.2
Msa1032470 AT1G22640.3 26.768 198 118 4 134 304 1 198 3.64e-12 65.5
Msa1032470 AT1G09770.1 40.000 85 50 1 92 176 8 91 1.90e-11 66.2

Find 85 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTACAGTTTGTTCTATAAA+AGG 0.209769 7_1:-67391236 Msa1032470:three_prime_UTR
CTGAATATGGTCCTCAAAAT+TGG 0.247103 7_1:-67392753 Msa1032470:CDS
AGGTCCAATATCTCAATTTC+TGG 0.252170 7_1:-67391445 Msa1032470:CDS
TTCACCAGAAATTGAGATAT+TGG 0.257304 7_1:+67391441 None:intergenic
ATTGTATAAACTCCTGGTTT+TGG 0.307076 7_1:-67391076 Msa1032470:three_prime_UTR
AAGGAGCTTGTTGCTGAATA+TGG 0.317262 7_1:-67392766 Msa1032470:CDS
CTCTTCTTCTTCCTCAGAAA+AGG 0.328360 7_1:+67392295 None:intergenic
GAAAGACTTTCAACAACAAC+TGG 0.343876 7_1:+67392119 None:intergenic
TTGTTATGCTGTGGTACTTT+TGG 0.354798 7_1:-67391017 Msa1032470:three_prime_UTR
TTAAGTTTAGCATCTTCTAT+TGG 0.361231 7_1:+67392787 None:intergenic
ACTATCTCAAGCACCATTGA+TGG 0.370339 7_1:-67392050 Msa1032470:CDS
TCAAGGCTATGGATCACTAA+TGG 0.371833 7_1:-67391934 Msa1032470:CDS
AGGAGCTATACAAAGCTAAA+TGG 0.376612 7_1:-67391359 Msa1032470:exon
AAAGCACCCATCTTCTACTT+TGG 0.377594 7_1:+67392921 None:intergenic
AGGAGTGAGTGAGAGATTAG+TGG 0.388076 7_1:+67392013 None:intergenic
AATTGAGATATTGGACCTAT+TGG 0.389765 7_1:+67391450 None:intergenic
ATAAAATGTATGGTAACAAA+TGG 0.396082 7_1:-67392256 Msa1032470:CDS
TTAGCTGCTCATAAAATGTA+TGG 0.406757 7_1:-67392266 Msa1032470:CDS
TCCTTTGACAAACCCTGAAA+AGG 0.411626 7_1:-67392977 Msa1032470:CDS
AGCTTTGTTCTAGAGGTCAT+TGG 0.416349 7_1:-67392813 Msa1032470:CDS
GTTTGTCAAAGGAAGAGCTT+TGG 0.416396 7_1:+67392987 None:intergenic
AATAGAAGATGCTAAACTTA+AGG 0.419512 7_1:-67392785 Msa1032470:CDS
AGCTCTGTTTCTGTGAAAGT+TGG 0.422370 7_1:-67392844 Msa1032470:CDS
ACAAGATGAGTTGAAGGAAT+AGG 0.438760 7_1:+67393015 None:intergenic
AACAGTGTACTGTGTATAGA+AGG 0.441649 7_1:-67392148 Msa1032470:CDS
TAGCCTTGATGACTCTCAAC+TGG 0.446270 7_1:+67391948 None:intergenic
CCATCCAAGTCATAAAACTT+TGG 0.446284 7_1:+67390976 None:intergenic
CAAGGCTATGGATCACTAAT+GGG 0.446395 7_1:-67391933 Msa1032470:intron
TTGATTGCAGAACATCTTGA+AGG 0.454431 7_1:-67392727 Msa1032470:CDS
CAAAGCTAAATGGTTGATAC+AGG 0.458360 7_1:-67391349 Msa1032470:exon
TTTAAGTCCAAAGTAGAAGA+TGG 0.458745 7_1:-67392928 Msa1032470:CDS
AGTTGAGACATTTCCATCAA+TGG 0.463655 7_1:+67392037 None:intergenic
ATAATGCAGTTAAGAATCAT+TGG 0.464544 7_1:-67392199 Msa1032470:CDS
ACTTTGGACTTAAACATTGA+GGG 0.468793 7_1:+67392937 None:intergenic
TTCTCATATAGCAGAATACT+AGG 0.469714 7_1:-67391048 Msa1032470:three_prime_UTR
ATAATAATTGTATAAACTCC+TGG 0.469951 7_1:-67391082 Msa1032470:three_prime_UTR
GAGAAAGTGTGGTGGCAACT+AGG 0.473551 7_1:-67391612 Msa1032470:CDS
AGAAAGTGTGGTGGCAACTA+GGG 0.475189 7_1:-67391611 Msa1032470:CDS
ATACAGGAAGATCATGGGTT+AGG 0.478477 7_1:-67391333 Msa1032470:three_prime_UTR
GATGGGTGCTTTGAGGTTCA+AGG 0.478786 7_1:-67392910 Msa1032470:CDS
TACTTTGGACTTAAACATTG+AGG 0.483288 7_1:+67392936 None:intergenic
GAATCAACAAGATGAGTTGA+AGG 0.483992 7_1:+67393009 None:intergenic
GAACATCTTGAAGGAAGATC+AGG 0.486206 7_1:-67392718 Msa1032470:intron
GAATCATTGGCATGTGATCA+TGG 0.487539 7_1:-67392186 Msa1032470:CDS
GTTGAAGGAATAGGAGCTAA+AGG 0.488826 7_1:+67393024 None:intergenic
CCTTTGACAAACCCTGAAAA+GGG 0.491757 7_1:-67392976 Msa1032470:CDS
CTGAGTCAGTTACCACCAAT+AGG 0.493276 7_1:-67391465 Msa1032470:CDS
TACTCCAAGCTTTGTTCTAG+AGG 0.507196 7_1:-67392820 Msa1032470:CDS
TAAAATGTATGGTAACAAAT+GGG 0.508678 7_1:-67392255 Msa1032470:CDS
ACTCCAAGAAAATCAATGAA+TGG 0.522689 7_1:+67391382 None:intergenic
TGAGATATTGGACCTATTGG+TGG 0.526375 7_1:+67391453 None:intergenic
GTTGAGAGTCATCAAGGCTA+TGG 0.526802 7_1:-67391945 Msa1032470:CDS
TGTTGTTGAAAGTCTTTCAA+AGG 0.527307 7_1:-67392114 Msa1032470:CDS
GCAAGGGAACCGTTTGTGTT+GGG 0.529275 7_1:-67391291 Msa1032470:three_prime_UTR
AGTAGAAGATGGGTGCTTTG+AGG 0.530721 7_1:-67392917 Msa1032470:CDS
TCTCATATAGCAGAATACTA+GGG 0.547555 7_1:-67391047 Msa1032470:three_prime_UTR
TGCAAGGGAACCGTTTGTGT+TGG 0.549674 7_1:-67391292 Msa1032470:three_prime_UTR
GTTCCAGTTGAGAGTCATCA+AGG 0.549857 7_1:-67391951 Msa1032470:CDS
TGGTTGATACAGGAAGATCA+TGG 0.550140 7_1:-67391339 Msa1032470:three_prime_UTR
TGATCATGGCTAGAAGACAT+AGG 0.551949 7_1:-67392172 Msa1032470:CDS
ATGACCTCTAGAACAAAGCT+TGG 0.553743 7_1:+67392816 None:intergenic
ACTGCATTATCTGTCCTCCC+TGG 0.558556 7_1:+67392212 None:intergenic
GATCATGGGTTAGGAAAGTG+AGG 0.563056 7_1:-67391324 Msa1032470:three_prime_UTR
GATCATGGCTAGAAGACATA+GGG 0.580957 7_1:-67392171 Msa1032470:CDS
GGGCCTTGTTTGTTATGCTG+TGG 0.583138 7_1:-67391026 Msa1032470:three_prime_UTR
AAAGCTAATAGATGTGGTGG+TGG 0.583743 7_1:-67391530 Msa1032470:CDS
TCTGGTGAAAGTGAAAATGT+TGG 0.594833 7_1:-67391427 Msa1032470:CDS
TTAAGTCCAAAGTAGAAGAT+GGG 0.595363 7_1:-67392927 Msa1032470:CDS
GCTAAAGCTAATAGATGTGG+TGG 0.598165 7_1:-67391533 Msa1032470:CDS
TATGAAAGTGATGATGACTT+AGG 0.598889 7_1:-67391129 Msa1032470:three_prime_UTR
ACTAGTTTATCAAACAGTTG+AGG 0.605771 7_1:+67391975 None:intergenic
AAAGCTAAAGCTAATAGATG+TGG 0.612393 7_1:-67391536 Msa1032470:CDS
ATGAGAAACAGTCCAAAACC+AGG 0.613282 7_1:+67391064 None:intergenic
TATAGAACAAACTGTACACA+AGG 0.613504 7_1:+67391241 None:intergenic
GGTTGATACAGGAAGATCAT+GGG 0.615733 7_1:-67391338 Msa1032470:three_prime_UTR
GTGAGGGTAGTCAGATGCAA+GGG 0.623599 7_1:-67391307 Msa1032470:three_prime_UTR
AGTGAGGGTAGTCAGATGCA+AGG 0.624309 7_1:-67391308 Msa1032470:three_prime_UTR
ATCATGGGTTAGGAAAGTGA+GGG 0.631123 7_1:-67391323 Msa1032470:three_prime_UTR
TAGTAAGAAGAATGAACAAG+TGG 0.631441 7_1:-67391560 Msa1032470:CDS
ACTTCACAAAAGTTCAACAA+TGG 0.637959 7_1:-67393069 Msa1032470:CDS
CTCATATAGCAGAATACTAG+GGG 0.639695 7_1:-67391046 Msa1032470:three_prime_UTR
AGACAAATCTAGAGAAAGTG+TGG 0.652450 7_1:-67391623 Msa1032470:CDS
GTACCACAGCATAACAAACA+AGG 0.673323 7_1:+67391023 None:intergenic
CAAATCTAGAGAAAGTGTGG+TGG 0.706572 7_1:-67391620 Msa1032470:CDS
ATAGAACAAACTGTACACAA+GGG 0.723372 7_1:+67391242 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTAATATTTATAAAT+TGG - chr7_1:67391543-67391562 Msa1032470:CDS 0.0%
!!! TTTTTTAATATTTATAAATT+GGG - chr7_1:67391544-67391563 Msa1032470:CDS 0.0%
!!! TTTTTTTAATATTTATAAAT+TGG - chr7_1:67391543-67391562 Msa1032470:CDS 0.0%
!!! TTTTTTAATATTTATAAATT+GGG - chr7_1:67391544-67391563 Msa1032470:CDS 0.0%
!!! TTAATATTTTCTTAAAAATG+GGG + chr7_1:67391339-67391358 None:intergenic 10.0%
!!! CTTTAATATTTTCTTAAAAA+TGG + chr7_1:67391341-67391360 None:intergenic 10.0%
!!! TTAATATTTTCTTAAAAATG+GGG + chr7_1:67391339-67391358 None:intergenic 10.0%
!!! CTTTAATATTTTCTTAAAAA+TGG + chr7_1:67391341-67391360 None:intergenic 10.0%
!! AAAATATTAAAATACATGCA+AGG + chr7_1:67391625-67391644 None:intergenic 15.0%
!! ATATTTAATAATCTCTCATT+AGG - chr7_1:67392114-67392133 Msa1032470:CDS 15.0%
!!! ACTATGTTTTATACTATTAT+AGG + chr7_1:67392140-67392159 None:intergenic 15.0%
!! TGTTATGTAACAATTAAATT+TGG + chr7_1:67392347-67392366 None:intergenic 15.0%
!! AATGAATTGAAGAAAAAAAT+AGG - chr7_1:67392825-67392844 Msa1032470:CDS 15.0%
!! AAAATATTAAAATACATGCA+AGG + chr7_1:67391625-67391644 None:intergenic 15.0%
!! ATATTTAATAATCTCTCATT+AGG - chr7_1:67392114-67392133 Msa1032470:CDS 15.0%
!!! ACTATGTTTTATACTATTAT+AGG + chr7_1:67392140-67392159 None:intergenic 15.0%
!! TGTTATGTAACAATTAAATT+TGG + chr7_1:67392347-67392366 None:intergenic 15.0%
!! AATGAATTGAAGAAAAAAAT+AGG - chr7_1:67392825-67392844 Msa1032470:CDS 15.0%
!!! AAAAACTTGTTTTTGAAACT+TGG - chr7_1:67391132-67391151 Msa1032470:three_prime_UTR 20.0%
!!! TTTTGTTCAATTTTAATTGC+AGG - chr7_1:67391644-67391663 Msa1032470:intron 20.0%
!! ATAAAATGTATGGTAACAAA+TGG - chr7_1:67391762-67391781 Msa1032470:intron 20.0%
!! TAAAATGTATGGTAACAAAT+GGG - chr7_1:67391763-67391782 Msa1032470:intron 20.0%
!!! TAAAACATAGTTTTAAGTTG+CGG - chr7_1:67392149-67392168 Msa1032470:CDS 20.0%
!! CACTACAAATATTTATATTG+CGG - chr7_1:67392181-67392200 Msa1032470:CDS 20.0%
!! AATATAGTTTAGCAAATTTC+CGG + chr7_1:67392302-67392321 None:intergenic 20.0%
!! ATAATAATTGTATAAACTCC+TGG - chr7_1:67392936-67392955 Msa1032470:CDS 20.0%
!!! AAAAACTTGTTTTTGAAACT+TGG - chr7_1:67391132-67391151 Msa1032470:three_prime_UTR 20.0%
!!! TTTTGTTCAATTTTAATTGC+AGG - chr7_1:67391644-67391663 Msa1032470:intron 20.0%
!! ATAAAATGTATGGTAACAAA+TGG - chr7_1:67391762-67391781 Msa1032470:intron 20.0%
!! TAAAATGTATGGTAACAAAT+GGG - chr7_1:67391763-67391782 Msa1032470:intron 20.0%
!!! TAAAACATAGTTTTAAGTTG+CGG - chr7_1:67392149-67392168 Msa1032470:CDS 20.0%
!! CACTACAAATATTTATATTG+CGG - chr7_1:67392181-67392200 Msa1032470:CDS 20.0%
!! AATATAGTTTAGCAAATTTC+CGG + chr7_1:67392302-67392321 None:intergenic 20.0%
!! ATAATAATTGTATAAACTCC+TGG - chr7_1:67392936-67392955 Msa1032470:CDS 20.0%
! TTAAGTTTAGCATCTTCTAT+TGG + chr7_1:67391234-67391253 None:intergenic 25.0%
! AATAGAAGATGCTAAACTTA+AGG - chr7_1:67391233-67391252 Msa1032470:three_prime_UTR 25.0%
!!! AGGTTTTTTTGTTGATTCTT+GGG + chr7_1:67391706-67391725 None:intergenic 25.0%
!!! AAGGTTTTTTTGTTGATTCT+TGG + chr7_1:67391707-67391726 None:intergenic 25.0%
! ATAATGCAGTTAAGAATCAT+TGG - chr7_1:67391819-67391838 Msa1032470:intron 25.0%
! CGCAATATAAATATTTGTAG+TGG + chr7_1:67392183-67392202 None:intergenic 25.0%
! TTTATATTGCGGTAAAATGT+AGG - chr7_1:67392192-67392211 Msa1032470:CDS 25.0%
! GTAACAATTAAATTTGGACA+TGG + chr7_1:67392341-67392360 None:intergenic 25.0%
!!! GTGAATTTTGACAAGTATTT+TGG - chr7_1:67392432-67392451 Msa1032470:intron 25.0%
! AGAGTTTGAATCTGAAAAAT+TGG + chr7_1:67392520-67392539 None:intergenic 25.0%
!! TGTACAGTTTGTTCTATAAA+AGG - chr7_1:67392782-67392801 Msa1032470:CDS 25.0%
! TTAAGTTTAGCATCTTCTAT+TGG + chr7_1:67391234-67391253 None:intergenic 25.0%
! AATAGAAGATGCTAAACTTA+AGG - chr7_1:67391233-67391252 Msa1032470:three_prime_UTR 25.0%
!!! AGGTTTTTTTGTTGATTCTT+GGG + chr7_1:67391706-67391725 None:intergenic 25.0%
!!! AAGGTTTTTTTGTTGATTCT+TGG + chr7_1:67391707-67391726 None:intergenic 25.0%
! ATAATGCAGTTAAGAATCAT+TGG - chr7_1:67391819-67391838 Msa1032470:intron 25.0%
! CGCAATATAAATATTTGTAG+TGG + chr7_1:67392183-67392202 None:intergenic 25.0%
! TTTATATTGCGGTAAAATGT+AGG - chr7_1:67392192-67392211 Msa1032470:CDS 25.0%
! GTAACAATTAAATTTGGACA+TGG + chr7_1:67392341-67392360 None:intergenic 25.0%
!!! GTGAATTTTGACAAGTATTT+TGG - chr7_1:67392432-67392451 Msa1032470:intron 25.0%
! AGAGTTTGAATCTGAAAAAT+TGG + chr7_1:67392520-67392539 None:intergenic 25.0%
!! TGTACAGTTTGTTCTATAAA+AGG - chr7_1:67392782-67392801 Msa1032470:CDS 25.0%
ACTTCACAAAAGTTCAACAA+TGG - chr7_1:67390949-67390968 Msa1032470:three_prime_UTR 30.0%
ACTTTGGACTTAAACATTGA+GGG + chr7_1:67391084-67391103 None:intergenic 30.0%
TACTTTGGACTTAAACATTG+AGG + chr7_1:67391085-67391104 None:intergenic 30.0%
TTTAAGTCCAAAGTAGAAGA+TGG - chr7_1:67391090-67391109 Msa1032470:three_prime_UTR 30.0%
TTAAGTCCAAAGTAGAAGAT+GGG - chr7_1:67391091-67391110 Msa1032470:three_prime_UTR 30.0%
! ATTTTCTTAAAAATGGGGAG+AGG + chr7_1:67391334-67391353 None:intergenic 30.0%
!! TTCTAGAGTAAATGCATGTT+TGG - chr7_1:67391377-67391396 Msa1032470:CDS 30.0%
! CAACAAAAAAACCTTTTCTG+AGG - chr7_1:67391712-67391731 Msa1032470:intron 30.0%
TTAGCTGCTCATAAAATGTA+TGG - chr7_1:67391752-67391771 Msa1032470:intron 30.0%
!! ATAATTGCTAGACTTTTTCC+AGG - chr7_1:67391788-67391807 Msa1032470:intron 30.0%
!! TAATTGCTAGACTTTTTCCA+GGG - chr7_1:67391789-67391808 Msa1032470:intron 30.0%
TGTTGTTGAAAGTCTTTCAA+AGG - chr7_1:67391904-67391923 Msa1032470:intron 30.0%
! ACTAGTTTATCAAACAGTTG+AGG + chr7_1:67392046-67392065 None:intergenic 30.0%
TAGTAAGAAGAATGAACAAG+TGG - chr7_1:67392458-67392477 Msa1032470:intron 30.0%
AAAGCTAAAGCTAATAGATG+TGG - chr7_1:67392482-67392501 Msa1032470:intron 30.0%
TTGAATCTGAAAAATTGGAC+TGG + chr7_1:67392515-67392534 None:intergenic 30.0%
AATTGAGATATTGGACCTAT+TGG + chr7_1:67392571-67392590 None:intergenic 30.0%
TTCACCAGAAATTGAGATAT+TGG + chr7_1:67392580-67392599 None:intergenic 30.0%
!!! CTACCATTCATTGATTTTCT+TGG - chr7_1:67392633-67392652 Msa1032470:intron 30.0%
ACTCCAAGAAAATCAATGAA+TGG + chr7_1:67392639-67392658 None:intergenic 30.0%
!!! TTCATTGATTTTCTTGGAGT+AGG - chr7_1:67392639-67392658 Msa1032470:intron 30.0%
ATAGAACAAACTGTACACAA+GGG + chr7_1:67392779-67392798 None:intergenic 30.0%
TATAGAACAAACTGTACACA+AGG + chr7_1:67392780-67392799 None:intergenic 30.0%
! TATGAAAGTGATGATGACTT+AGG - chr7_1:67392889-67392908 Msa1032470:CDS 30.0%
! ATTGTATAAACTCCTGGTTT+TGG - chr7_1:67392942-67392961 Msa1032470:CDS 30.0%
TTCTCATATAGCAGAATACT+AGG - chr7_1:67392970-67392989 Msa1032470:CDS 30.0%
TCTCATATAGCAGAATACTA+GGG - chr7_1:67392971-67392990 Msa1032470:CDS 30.0%
ACTTCACAAAAGTTCAACAA+TGG - chr7_1:67390949-67390968 Msa1032470:three_prime_UTR 30.0%
ACTTTGGACTTAAACATTGA+GGG + chr7_1:67391084-67391103 None:intergenic 30.0%
TACTTTGGACTTAAACATTG+AGG + chr7_1:67391085-67391104 None:intergenic 30.0%
TTTAAGTCCAAAGTAGAAGA+TGG - chr7_1:67391090-67391109 Msa1032470:three_prime_UTR 30.0%
TTAAGTCCAAAGTAGAAGAT+GGG - chr7_1:67391091-67391110 Msa1032470:three_prime_UTR 30.0%
! ATTTTCTTAAAAATGGGGAG+AGG + chr7_1:67391334-67391353 None:intergenic 30.0%
!! TTCTAGAGTAAATGCATGTT+TGG - chr7_1:67391377-67391396 Msa1032470:CDS 30.0%
! CAACAAAAAAACCTTTTCTG+AGG - chr7_1:67391712-67391731 Msa1032470:intron 30.0%
TTAGCTGCTCATAAAATGTA+TGG - chr7_1:67391752-67391771 Msa1032470:intron 30.0%
!! ATAATTGCTAGACTTTTTCC+AGG - chr7_1:67391788-67391807 Msa1032470:intron 30.0%
!! TAATTGCTAGACTTTTTCCA+GGG - chr7_1:67391789-67391808 Msa1032470:intron 30.0%
TGTTGTTGAAAGTCTTTCAA+AGG - chr7_1:67391904-67391923 Msa1032470:intron 30.0%
! ACTAGTTTATCAAACAGTTG+AGG + chr7_1:67392046-67392065 None:intergenic 30.0%
TAGTAAGAAGAATGAACAAG+TGG - chr7_1:67392458-67392477 Msa1032470:intron 30.0%
AAAGCTAAAGCTAATAGATG+TGG - chr7_1:67392482-67392501 Msa1032470:intron 30.0%
TTGAATCTGAAAAATTGGAC+TGG + chr7_1:67392515-67392534 None:intergenic 30.0%
AATTGAGATATTGGACCTAT+TGG + chr7_1:67392571-67392590 None:intergenic 30.0%
TTCACCAGAAATTGAGATAT+TGG + chr7_1:67392580-67392599 None:intergenic 30.0%
!!! CTACCATTCATTGATTTTCT+TGG - chr7_1:67392633-67392652 Msa1032470:intron 30.0%
ACTCCAAGAAAATCAATGAA+TGG + chr7_1:67392639-67392658 None:intergenic 30.0%
!!! TTCATTGATTTTCTTGGAGT+AGG - chr7_1:67392639-67392658 Msa1032470:intron 30.0%
ATAGAACAAACTGTACACAA+GGG + chr7_1:67392779-67392798 None:intergenic 30.0%
TATAGAACAAACTGTACACA+AGG + chr7_1:67392780-67392799 None:intergenic 30.0%
! TATGAAAGTGATGATGACTT+AGG - chr7_1:67392889-67392908 Msa1032470:CDS 30.0%
! ATTGTATAAACTCCTGGTTT+TGG - chr7_1:67392942-67392961 Msa1032470:CDS 30.0%
TTCTCATATAGCAGAATACT+AGG - chr7_1:67392970-67392989 Msa1032470:CDS 30.0%
TCTCATATAGCAGAATACTA+GGG - chr7_1:67392971-67392990 Msa1032470:CDS 30.0%
! ACAAGATGAGTTGAAGGAAT+AGG + chr7_1:67391006-67391025 None:intergenic 35.0%
! GAATCAACAAGATGAGTTGA+AGG + chr7_1:67391012-67391031 None:intergenic 35.0%
! AAATCTGAAGACCCTTTTCA+GGG + chr7_1:67391056-67391075 None:intergenic 35.0%
! AAAATCTGAAGACCCTTTTC+AGG + chr7_1:67391057-67391076 None:intergenic 35.0%
CTGAATATGGTCCTCAAAAT+TGG - chr7_1:67391265-67391284 Msa1032470:three_prime_UTR 35.0%
! GCAATCAAGTTCCAATTTTG+AGG + chr7_1:67391279-67391298 None:intergenic 35.0%
TTGATTGCAGAACATCTTGA+AGG - chr7_1:67391291-67391310 Msa1032470:three_prime_UTR 35.0%
CCTTCTTCACATTACAGAAA+TGG + chr7_1:67391595-67391614 None:intergenic 35.0%
CCATTTCTGTAATGTGAAGA+AGG - chr7_1:67391592-67391611 Msa1032470:CDS 35.0%
CAGGAAAAAGTTGTAGATTG+AGG - chr7_1:67391663-67391682 Msa1032470:intron 35.0%
GAAAAAGTTGTAGATTGAGG+TGG - chr7_1:67391666-67391685 Msa1032470:intron 35.0%
AACAGTGTACTGTGTATAGA+AGG - chr7_1:67391870-67391889 Msa1032470:intron 35.0%
GAAAGACTTTCAACAACAAC+TGG + chr7_1:67391902-67391921 None:intergenic 35.0%
AGTTGAGACATTTCCATCAA+TGG + chr7_1:67391984-67392003 None:intergenic 35.0%
! AATTGTAAATGCGAAGGCAT+CGG + chr7_1:67392226-67392245 None:intergenic 35.0%
CATCACAATTGTAAATGCGA+AGG + chr7_1:67392232-67392251 None:intergenic 35.0%
AGACAAATCTAGAGAAAGTG+TGG - chr7_1:67392395-67392414 Msa1032470:intron 35.0%
AGGTCCAATATCTCAATTTC+TGG - chr7_1:67392573-67392592 Msa1032470:intron 35.0%
TCTGGTGAAAGTGAAAATGT+TGG - chr7_1:67392591-67392610 Msa1032470:intron 35.0%
AGGAGCTATACAAAGCTAAA+TGG - chr7_1:67392659-67392678 Msa1032470:intron 35.0%
! CAAAGCTAAATGGTTGATAC+AGG - chr7_1:67392669-67392688 Msa1032470:intron 35.0%
! TCATTTTCACCCAACACAAA+CGG + chr7_1:67392739-67392758 None:intergenic 35.0%
CTCATATAGCAGAATACTAG+GGG - chr7_1:67392972-67392991 Msa1032470:CDS 35.0%
! TTGTTATGCTGTGGTACTTT+TGG - chr7_1:67393001-67393020 Msa1032470:CDS 35.0%
!! GAAGCCAAAGTTTTATGACT+TGG - chr7_1:67393038-67393057 Msa1032470:CDS 35.0%
CCATCCAAGTCATAAAACTT+TGG + chr7_1:67393045-67393064 None:intergenic 35.0%
!! CCAAAGTTTTATGACTTGGA+TGG - chr7_1:67393042-67393061 Msa1032470:CDS 35.0%
!! AGTTTTATGACTTGGATGGA+TGG - chr7_1:67393046-67393065 Msa1032470:CDS 35.0%
! ACAAGATGAGTTGAAGGAAT+AGG + chr7_1:67391006-67391025 None:intergenic 35.0%
! GAATCAACAAGATGAGTTGA+AGG + chr7_1:67391012-67391031 None:intergenic 35.0%
! AAATCTGAAGACCCTTTTCA+GGG + chr7_1:67391056-67391075 None:intergenic 35.0%
! AAAATCTGAAGACCCTTTTC+AGG + chr7_1:67391057-67391076 None:intergenic 35.0%
CTGAATATGGTCCTCAAAAT+TGG - chr7_1:67391265-67391284 Msa1032470:three_prime_UTR 35.0%
! GCAATCAAGTTCCAATTTTG+AGG + chr7_1:67391279-67391298 None:intergenic 35.0%
TTGATTGCAGAACATCTTGA+AGG - chr7_1:67391291-67391310 Msa1032470:three_prime_UTR 35.0%
CCTTCTTCACATTACAGAAA+TGG + chr7_1:67391595-67391614 None:intergenic 35.0%
CCATTTCTGTAATGTGAAGA+AGG - chr7_1:67391592-67391611 Msa1032470:CDS 35.0%
CAGGAAAAAGTTGTAGATTG+AGG - chr7_1:67391663-67391682 Msa1032470:intron 35.0%
GAAAAAGTTGTAGATTGAGG+TGG - chr7_1:67391666-67391685 Msa1032470:intron 35.0%
AACAGTGTACTGTGTATAGA+AGG - chr7_1:67391870-67391889 Msa1032470:intron 35.0%
GAAAGACTTTCAACAACAAC+TGG + chr7_1:67391902-67391921 None:intergenic 35.0%
AGTTGAGACATTTCCATCAA+TGG + chr7_1:67391984-67392003 None:intergenic 35.0%
! AATTGTAAATGCGAAGGCAT+CGG + chr7_1:67392226-67392245 None:intergenic 35.0%
CATCACAATTGTAAATGCGA+AGG + chr7_1:67392232-67392251 None:intergenic 35.0%
AGACAAATCTAGAGAAAGTG+TGG - chr7_1:67392395-67392414 Msa1032470:intron 35.0%
AGGTCCAATATCTCAATTTC+TGG - chr7_1:67392573-67392592 Msa1032470:intron 35.0%
TCTGGTGAAAGTGAAAATGT+TGG - chr7_1:67392591-67392610 Msa1032470:intron 35.0%
AGGAGCTATACAAAGCTAAA+TGG - chr7_1:67392659-67392678 Msa1032470:intron 35.0%
! CAAAGCTAAATGGTTGATAC+AGG - chr7_1:67392669-67392688 Msa1032470:intron 35.0%
! TCATTTTCACCCAACACAAA+CGG + chr7_1:67392739-67392758 None:intergenic 35.0%
CTCATATAGCAGAATACTAG+GGG - chr7_1:67392972-67392991 Msa1032470:CDS 35.0%
! TTGTTATGCTGTGGTACTTT+TGG - chr7_1:67393001-67393020 Msa1032470:CDS 35.0%
!! GAAGCCAAAGTTTTATGACT+TGG - chr7_1:67393038-67393057 Msa1032470:CDS 35.0%
CCATCCAAGTCATAAAACTT+TGG + chr7_1:67393045-67393064 None:intergenic 35.0%
!! CCAAAGTTTTATGACTTGGA+TGG - chr7_1:67393042-67393061 Msa1032470:CDS 35.0%
!! AGTTTTATGACTTGGATGGA+TGG - chr7_1:67393046-67393065 Msa1032470:CDS 35.0%
GTTGAAGGAATAGGAGCTAA+AGG + chr7_1:67390997-67391016 None:intergenic 40.0%
GTTTGTCAAAGGAAGAGCTT+TGG + chr7_1:67391034-67391053 None:intergenic 40.0%
TCCTTTGACAAACCCTGAAA+AGG - chr7_1:67391041-67391060 Msa1032470:three_prime_UTR 40.0%
CCTTTGACAAACCCTGAAAA+GGG - chr7_1:67391042-67391061 Msa1032470:three_prime_UTR 40.0%
! AAAGCACCCATCTTCTACTT+TGG + chr7_1:67391100-67391119 None:intergenic 40.0%
!! AGCTCTGTTTCTGTGAAAGT+TGG - chr7_1:67391174-67391193 Msa1032470:three_prime_UTR 40.0%
!! TACTCCAAGCTTTGTTCTAG+AGG - chr7_1:67391198-67391217 Msa1032470:three_prime_UTR 40.0%
!! ATGACCTCTAGAACAAAGCT+TGG + chr7_1:67391205-67391224 None:intergenic 40.0%
!! AGCTTTGTTCTAGAGGTCAT+TGG - chr7_1:67391205-67391224 Msa1032470:three_prime_UTR 40.0%
!! AAGGAGCTTGTTGCTGAATA+TGG - chr7_1:67391252-67391271 Msa1032470:three_prime_UTR 40.0%
GAACATCTTGAAGGAAGATC+AGG - chr7_1:67391300-67391319 Msa1032470:three_prime_UTR 40.0%
!! TCATCACTTTGAGACACAAC+AGG + chr7_1:67391426-67391445 None:intergenic 40.0%
CTCTTCTTCTTCCTCAGAAA+AGG + chr7_1:67391726-67391745 None:intergenic 40.0%
GAATCATTGGCATGTGATCA+TGG - chr7_1:67391832-67391851 Msa1032470:intron 40.0%
TGATCATGGCTAGAAGACAT+AGG - chr7_1:67391846-67391865 Msa1032470:intron 40.0%
GATCATGGCTAGAAGACATA+GGG - chr7_1:67391847-67391866 Msa1032470:intron 40.0%
ACTATCTCAAGCACCATTGA+TGG - chr7_1:67391968-67391987 Msa1032470:CDS 40.0%
!!! TGAGGACTTAGTTTTGCTGA+AGG + chr7_1:67392028-67392047 None:intergenic 40.0%
TCAAGGCTATGGATCACTAA+TGG - chr7_1:67392084-67392103 Msa1032470:CDS 40.0%
CAAGGCTATGGATCACTAAT+GGG - chr7_1:67392085-67392104 Msa1032470:CDS 40.0%
TGCGGTAAAATGTAGGCAAA+TGG - chr7_1:67392199-67392218 Msa1032470:CDS 40.0%
GCGGTAAAATGTAGGCAAAT+GGG - chr7_1:67392200-67392219 Msa1032470:CDS 40.0%
! GTATGTTTAGAATCACGACG+AGG - chr7_1:67392272-67392291 Msa1032470:CDS 40.0%
! CAAATCTAGAGAAAGTGTGG+TGG - chr7_1:67392398-67392417 Msa1032470:intron 40.0%
GCTAAAGCTAATAGATGTGG+TGG - chr7_1:67392485-67392504 Msa1032470:intron 40.0%
AAAGCTAATAGATGTGGTGG+TGG - chr7_1:67392488-67392507 Msa1032470:intron 40.0%
TGAGATATTGGACCTATTGG+TGG + chr7_1:67392568-67392587 None:intergenic 40.0%
! TGGTTGATACAGGAAGATCA+TGG - chr7_1:67392679-67392698 Msa1032470:intron 40.0%
! GGTTGATACAGGAAGATCAT+GGG - chr7_1:67392680-67392699 Msa1032470:intron 40.0%
ATACAGGAAGATCATGGGTT+AGG - chr7_1:67392685-67392704 Msa1032470:intron 40.0%
!! ATCATGGGTTAGGAAAGTGA+GGG - chr7_1:67392695-67392714 Msa1032470:intron 40.0%
ATGAGAAACAGTCCAAAACC+AGG + chr7_1:67392957-67392976 None:intergenic 40.0%
GTACCACAGCATAACAAACA+AGG + chr7_1:67392998-67393017 None:intergenic 40.0%
GTTGAAGGAATAGGAGCTAA+AGG + chr7_1:67390997-67391016 None:intergenic 40.0%
GTTTGTCAAAGGAAGAGCTT+TGG + chr7_1:67391034-67391053 None:intergenic 40.0%
TCCTTTGACAAACCCTGAAA+AGG - chr7_1:67391041-67391060 Msa1032470:three_prime_UTR 40.0%
CCTTTGACAAACCCTGAAAA+GGG - chr7_1:67391042-67391061 Msa1032470:three_prime_UTR 40.0%
! AAAGCACCCATCTTCTACTT+TGG + chr7_1:67391100-67391119 None:intergenic 40.0%
!! AGCTCTGTTTCTGTGAAAGT+TGG - chr7_1:67391174-67391193 Msa1032470:three_prime_UTR 40.0%
!! TACTCCAAGCTTTGTTCTAG+AGG - chr7_1:67391198-67391217 Msa1032470:three_prime_UTR 40.0%
!! ATGACCTCTAGAACAAAGCT+TGG + chr7_1:67391205-67391224 None:intergenic 40.0%
!! AGCTTTGTTCTAGAGGTCAT+TGG - chr7_1:67391205-67391224 Msa1032470:three_prime_UTR 40.0%
!! AAGGAGCTTGTTGCTGAATA+TGG - chr7_1:67391252-67391271 Msa1032470:three_prime_UTR 40.0%
GAACATCTTGAAGGAAGATC+AGG - chr7_1:67391300-67391319 Msa1032470:three_prime_UTR 40.0%
!! TCATCACTTTGAGACACAAC+AGG + chr7_1:67391426-67391445 None:intergenic 40.0%
CTCTTCTTCTTCCTCAGAAA+AGG + chr7_1:67391726-67391745 None:intergenic 40.0%
GAATCATTGGCATGTGATCA+TGG - chr7_1:67391832-67391851 Msa1032470:intron 40.0%
TGATCATGGCTAGAAGACAT+AGG - chr7_1:67391846-67391865 Msa1032470:intron 40.0%
GATCATGGCTAGAAGACATA+GGG - chr7_1:67391847-67391866 Msa1032470:intron 40.0%
ACTATCTCAAGCACCATTGA+TGG - chr7_1:67391968-67391987 Msa1032470:CDS 40.0%
!!! TGAGGACTTAGTTTTGCTGA+AGG + chr7_1:67392028-67392047 None:intergenic 40.0%
TCAAGGCTATGGATCACTAA+TGG - chr7_1:67392084-67392103 Msa1032470:CDS 40.0%
CAAGGCTATGGATCACTAAT+GGG - chr7_1:67392085-67392104 Msa1032470:CDS 40.0%
TGCGGTAAAATGTAGGCAAA+TGG - chr7_1:67392199-67392218 Msa1032470:CDS 40.0%
GCGGTAAAATGTAGGCAAAT+GGG - chr7_1:67392200-67392219 Msa1032470:CDS 40.0%
! GTATGTTTAGAATCACGACG+AGG - chr7_1:67392272-67392291 Msa1032470:CDS 40.0%
! CAAATCTAGAGAAAGTGTGG+TGG - chr7_1:67392398-67392417 Msa1032470:intron 40.0%
GCTAAAGCTAATAGATGTGG+TGG - chr7_1:67392485-67392504 Msa1032470:intron 40.0%
AAAGCTAATAGATGTGGTGG+TGG - chr7_1:67392488-67392507 Msa1032470:intron 40.0%
TGAGATATTGGACCTATTGG+TGG + chr7_1:67392568-67392587 None:intergenic 40.0%
! TGGTTGATACAGGAAGATCA+TGG - chr7_1:67392679-67392698 Msa1032470:intron 40.0%
! GGTTGATACAGGAAGATCAT+GGG - chr7_1:67392680-67392699 Msa1032470:intron 40.0%
ATACAGGAAGATCATGGGTT+AGG - chr7_1:67392685-67392704 Msa1032470:intron 40.0%
!! ATCATGGGTTAGGAAAGTGA+GGG - chr7_1:67392695-67392714 Msa1032470:intron 40.0%
ATGAGAAACAGTCCAAAACC+AGG + chr7_1:67392957-67392976 None:intergenic 40.0%
GTACCACAGCATAACAAACA+AGG + chr7_1:67392998-67393017 None:intergenic 40.0%
!! CCCTTTTCAGGGTTTGTCAA+AGG + chr7_1:67391045-67391064 None:intergenic 45.0%
AGTAGAAGATGGGTGCTTTG+AGG - chr7_1:67391101-67391120 Msa1032470:three_prime_UTR 45.0%
!! TTGCTAGACTTTTTCCAGGG+AGG - chr7_1:67391792-67391811 Msa1032470:intron 45.0%
AGGAGTGAGTGAGAGATTAG+TGG + chr7_1:67392008-67392027 None:intergenic 45.0%
GTTCCAGTTGAGAGTCATCA+AGG - chr7_1:67392067-67392086 Msa1032470:CDS 45.0%
! TAGCCTTGATGACTCTCAAC+TGG + chr7_1:67392073-67392092 None:intergenic 45.0%
GTTGAGAGTCATCAAGGCTA+TGG - chr7_1:67392073-67392092 Msa1032470:CDS 45.0%
! AGAAAGTGTGGTGGCAACTA+GGG - chr7_1:67392407-67392426 Msa1032470:intron 45.0%
CTGAGTCAGTTACCACCAAT+AGG - chr7_1:67392553-67392572 Msa1032470:intron 45.0%
!! GATCATGGGTTAGGAAAGTG+AGG - chr7_1:67392694-67392713 Msa1032470:intron 45.0%
!! CCCTTTTCAGGGTTTGTCAA+AGG + chr7_1:67391045-67391064 None:intergenic 45.0%
AGTAGAAGATGGGTGCTTTG+AGG - chr7_1:67391101-67391120 Msa1032470:three_prime_UTR 45.0%
!! TTGCTAGACTTTTTCCAGGG+AGG - chr7_1:67391792-67391811 Msa1032470:intron 45.0%
AGGAGTGAGTGAGAGATTAG+TGG + chr7_1:67392008-67392027 None:intergenic 45.0%
GTTCCAGTTGAGAGTCATCA+AGG - chr7_1:67392067-67392086 Msa1032470:CDS 45.0%
! TAGCCTTGATGACTCTCAAC+TGG + chr7_1:67392073-67392092 None:intergenic 45.0%
GTTGAGAGTCATCAAGGCTA+TGG - chr7_1:67392073-67392092 Msa1032470:CDS 45.0%
! AGAAAGTGTGGTGGCAACTA+GGG - chr7_1:67392407-67392426 Msa1032470:intron 45.0%
CTGAGTCAGTTACCACCAAT+AGG - chr7_1:67392553-67392572 Msa1032470:intron 45.0%
!! GATCATGGGTTAGGAAAGTG+AGG - chr7_1:67392694-67392713 Msa1032470:intron 45.0%
!!! TTTAATATTTTCTTAAAAAT+GGG + chr7_1:67391340-67391359 None:intergenic 5.0%
!!! TTTTTAATATTTATAAATTG+GGG - chr7_1:67391545-67391564 Msa1032470:CDS 5.0%
!!! TTTAATATTTTCTTAAAAAT+GGG + chr7_1:67391340-67391359 None:intergenic 5.0%
!!! TTTTTAATATTTATAAATTG+GGG - chr7_1:67391545-67391564 Msa1032470:CDS 5.0%
!! GATGGGTGCTTTGAGGTTCA+AGG - chr7_1:67391108-67391127 Msa1032470:three_prime_UTR 50.0%
ACTGCATTATCTGTCCTCCC+TGG + chr7_1:67391809-67391828 None:intergenic 50.0%
AGAATCACGACGAGGTTCAC+CGG - chr7_1:67392280-67392299 Msa1032470:CDS 50.0%
! GAGAAAGTGTGGTGGCAACT+AGG - chr7_1:67392406-67392425 Msa1032470:intron 50.0%
AGTGAGGGTAGTCAGATGCA+AGG - chr7_1:67392710-67392729 Msa1032470:intron 50.0%
GTGAGGGTAGTCAGATGCAA+GGG - chr7_1:67392711-67392730 Msa1032470:intron 50.0%
TGCAAGGGAACCGTTTGTGT+TGG - chr7_1:67392726-67392745 Msa1032470:CDS 50.0%
GCAAGGGAACCGTTTGTGTT+GGG - chr7_1:67392727-67392746 Msa1032470:CDS 50.0%
!! GGGCCTTGTTTGTTATGCTG+TGG - chr7_1:67392992-67393011 Msa1032470:CDS 50.0%
!! GATGGGTGCTTTGAGGTTCA+AGG - chr7_1:67391108-67391127 Msa1032470:three_prime_UTR 50.0%
ACTGCATTATCTGTCCTCCC+TGG + chr7_1:67391809-67391828 None:intergenic 50.0%
AGAATCACGACGAGGTTCAC+CGG - chr7_1:67392280-67392299 Msa1032470:CDS 50.0%
! GAGAAAGTGTGGTGGCAACT+AGG - chr7_1:67392406-67392425 Msa1032470:intron 50.0%
AGTGAGGGTAGTCAGATGCA+AGG - chr7_1:67392710-67392729 Msa1032470:intron 50.0%
GTGAGGGTAGTCAGATGCAA+GGG - chr7_1:67392711-67392730 Msa1032470:intron 50.0%
TGCAAGGGAACCGTTTGTGT+TGG - chr7_1:67392726-67392745 Msa1032470:CDS 50.0%
GCAAGGGAACCGTTTGTGTT+GGG - chr7_1:67392727-67392746 Msa1032470:CDS 50.0%
!! GGGCCTTGTTTGTTATGCTG+TGG - chr7_1:67392992-67393011 Msa1032470:CDS 50.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 67390946 67393094 67390946 ID=Msa1032470;Name=Msa1032470
chr7_1 mRNA 67390946 67393094 67390946 ID=Msa1032470-mRNA-1;Parent=Msa1032470;Name=Msa1032470-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.33|1|1|1|3|417|365
chr7_1 exon 67390946 67391643 67390946 ID=Msa1032470-mRNA-1:exon:15489;Parent=Msa1032470-mRNA-1
chr7_1 exon 67391934 67392374 67391934 ID=Msa1032470-mRNA-1:exon:15488;Parent=Msa1032470-mRNA-1
chr7_1 exon 67392719 67393094 67392719 ID=Msa1032470-mRNA-1:exon:15487;Parent=Msa1032470-mRNA-1
chr7_1 CDS 67392719 67393094 67392719 ID=Msa1032470-mRNA-1:cds;Parent=Msa1032470-mRNA-1
chr7_1 CDS 67391934 67392374 67391934 ID=Msa1032470-mRNA-1:cds;Parent=Msa1032470-mRNA-1
chr7_1 CDS 67391363 67391643 67391363 ID=Msa1032470-mRNA-1:cds;Parent=Msa1032470-mRNA-1
chr7_1 three_prime_UTR 67390946 67391362 67390946 ID=Msa1032470-mRNA-1:three_prime_utr;Parent=Msa1032470-mRNA-1
Gene Sequence

>Msa1032470

ATGACTTCACAAAAGTTCAACAATGGTGATATCAATATGAGTCTTTTTCCTTTAGCTCCTATTCCTTCAACTCATCTTGTTGATTCCAAAGCTCTTCCTTTGACAAACCCTGAAAAGGGTCTTCAGATTTTGAGACCCTCAATGTTTAAGTCCAAAGTAGAAGATGGGTGCTTTGAGGTTCAAGGAAAAAACTTGTTTTTGAAACTTGGTAATGAAGTAGAAGATAAAAGCTCTGTTTCTGTGAAAGTTGGATACTCCAAGCTTTGTTCTAGAGGTCATTGGAGACCAATAGAAGATGCTAAACTTAAGGAGCTTGTTGCTGAATATGGTCCTCAAAATTGGAACTTGATTGCAGAACATCTTGAAGGAAGATCAGGAAAAAGTTGTAGATTGAGGTGGTTCAATCAGCTAGACCCAAGAATCAACAAAAAAACCTTTTCTGAGGAAGAAGAAGAGAGACTTTTAGCTGCTCATAAAATGTATGGTAACAAATGGGCTATAATTGCTAGACTTTTTCCAGGGAGGACAGATAATGCAGTTAAGAATCATTGGCATGTGATCATGGCTAGAAGACATAGGGAACAGTGTACTGTGTATAGAAGGAGAAAGCCAGTTGTTGTTGAAAGTCTTTCAAAGGATTTAAAATTAAGTCTTTCAAACAATGCAGCTAGTGATTCAACTATCTCAAGCACCATTGATGGAAATGTCTCAACTTCCACTAATCTCTCACTCACTCCTTCAGCAAAACTAAGTCCTCAACTGTTTGATAAACTAGTTGTTCCAGTTGAGAGTCATCAAGGCTATGGATCACTAATGGACAAATCTAGAGAAAGTGTGGTGGCAACTAGGGAAGTGAATTTTGACAAGTATTTTGGAGCTAGTAAGAAGAATGAACAAGTGGAAAAGCTAAAGCTAATAGATGTGGTGGTGGACCAGTCCAATTTTTCAGATTCAAACTCTGAAGTATCAGTATCTGAGTCAGTTACCACCAATAGGTCCAATATCTCAATTTCTGGTGAAAGTGAAAATGTTGGTGTTAAGATTAACATGTTACTACCATTCATTGATTTTCTTGGAGTAGGAGCTATACAAAGCTAA
Protein sequence

>Msa1032470

MTSQKFNNGDINMSLFPLAPIPSTHLVDSKALPLTNPEKGLQILRPSMFKSKVEDGCFEVQGKNLFLKLGNEVEDKSSVSVKVGYSKLCSRGHWRPIEDAKLKELVAEYGPQNWNLIAEHLEGRSGKSCRLRWFNQLDPRINKKTFSEEEEERLLAAHKMYGNKWAIIARLFPGRTDNAVKNHWHVIMARRHREQCTVYRRRKPVVVESLSKDLKLSLSNNAASDSTISSTIDGNVSTSTNLSLTPSAKLSPQLFDKLVVPVESHQGYGSLMDKSRESVVATREVNFDKYFGASKKNEQVEKLKLIDVVVDQSNFSDSNSEVSVSESVTTNRSNISISGESENVGVKINMLLPFIDFLGVGAIQS*