Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1351990 | XP_003624741.1 | 94.795 | 365 | 10 | 2 | 1 | 365 | 1 | 356 | 0.0 | 699 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1351990 | sp|Q5NBM8|CSA_ORYSJ | 83.761 | 117 | 19 | 0 | 87 | 203 | 45 | 161 | 6.60e-73 | 233 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1351990 | A2Q4D1 | 94.795 | 365 | 10 | 2 | 1 | 365 | 1 | 356 | 0.0 | 699 |
Gene ID | Type | Classification |
---|---|---|
Msa1351990 | TF | MYB |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0033220 | Msa1351990 | 0.816150 | 6.413027e-52 | -8.615850e-47 |
Msa0063940 | Msa1351990 | 0.829005 | 6.556296e-55 | -8.615850e-47 |
Msa0102240 | Msa1351990 | 0.804784 | 1.829384e-49 | -8.615850e-47 |
Msa1351990 | Msa1372000 | 0.811764 | 5.947818e-51 | -8.615850e-47 |
Msa0610690 | Msa1351990 | 0.810951 | 8.930215e-51 | -8.615850e-47 |
Msa0674480 | Msa1351990 | 0.800836 | 1.195265e-48 | -8.615850e-47 |
Msa0742370 | Msa1351990 | -0.811996 | 5.293737e-51 | -8.615850e-47 |
Msa0795750 | Msa1351990 | 0.837088 | 6.387053e-57 | -8.615850e-47 |
Msa0831740 | Msa1351990 | 0.817121 | 3.886565e-52 | -8.615850e-47 |
Msa1251410 | Msa1351990 | 0.813232 | 2.840911e-51 | -8.615850e-47 |
Msa1260220 | Msa1351990 | 0.815443 | 9.221957e-52 | -8.615850e-47 |
Msa1032470 | Msa1351990 | 0.891764 | 2.949802e-74 | -8.615850e-47 |
Msa1072250 | Msa1351990 | 0.841972 | 3.436188e-58 | -8.615850e-47 |
Msa1106590 | Msa1351990 | 0.802748 | 4.841373e-49 | -8.615850e-47 |
Msa0313900 | Msa1351990 | 0.801745 | 7.790789e-49 | -8.615850e-47 |
Msa1159270 | Msa1351990 | 0.851609 | 7.939851e-61 | -8.615850e-47 |
Msa1197720 | Msa1351990 | 0.807631 | 4.599163e-50 | -8.615850e-47 |
Msa1207920 | Msa1351990 | -0.804980 | 1.664898e-49 | -8.615850e-47 |
Msa1213040 | Msa1351990 | 0.814705 | 1.344381e-51 | -8.615850e-47 |
Msa0566940 | Msa1351990 | -0.802739 | 4.861959e-49 | -8.615850e-47 |
Msa0579080 | Msa1351990 | 0.809840 | 1.550877e-50 | -8.615850e-47 |
Msa0579160 | Msa1351990 | 0.824499 | 7.810301e-54 | -8.615850e-47 |
Msa0579220 | Msa1351990 | 0.831356 | 1.748149e-55 | -8.615850e-47 |
Msa0862480 | Msa1351990 | -0.809679 | 1.679592e-50 | -8.615850e-47 |
Msa0928180 | Msa1351990 | 0.801157 | 1.027894e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1351990 | MtrunA17_Chr7g0254261 | 94.795 | 365 | 10 | 2 | 1 | 365 | 1 | 356 | 0.0 | 699 |
Msa1351990 | MtrunA17_Chr6g0460671 | 49.695 | 328 | 131 | 7 | 34 | 361 | 52 | 345 | 1.25e-80 | 250 |
Msa1351990 | MtrunA17_Chr4g0042501 | 75.000 | 140 | 35 | 0 | 64 | 203 | 78 | 217 | 1.23e-74 | 237 |
Msa1351990 | MtrunA17_Chr5g0417621 | 42.236 | 322 | 137 | 10 | 84 | 363 | 127 | 441 | 8.69e-71 | 228 |
Msa1351990 | MtrunA17_Chr3g0125801 | 42.295 | 305 | 128 | 7 | 86 | 365 | 11 | 292 | 3.99e-62 | 201 |
Msa1351990 | MtrunA17_Chr6g0480581 | 73.214 | 112 | 30 | 0 | 88 | 199 | 1 | 112 | 1.01e-60 | 195 |
Msa1351990 | MtrunA17_Chr6g0460661 | 57.143 | 119 | 51 | 0 | 90 | 208 | 15 | 133 | 5.10e-46 | 154 |
Msa1351990 | MtrunA17_Chr4g0008551 | 59.406 | 101 | 41 | 0 | 91 | 191 | 38 | 138 | 5.11e-40 | 144 |
Msa1351990 | MtrunA17_Chr5g0401731 | 46.617 | 133 | 62 | 2 | 91 | 223 | 15 | 138 | 1.16e-37 | 137 |
Msa1351990 | MtrunA17_Chr4g0053431 | 55.446 | 101 | 45 | 0 | 91 | 191 | 5 | 105 | 3.68e-37 | 135 |
Msa1351990 | MtrunA17_Chr3g0133601 | 56.436 | 101 | 44 | 0 | 91 | 191 | 37 | 137 | 1.57e-36 | 132 |
Msa1351990 | MtrunA17_Chr6g0454921 | 50.495 | 101 | 50 | 0 | 91 | 191 | 15 | 115 | 2.28e-34 | 125 |
Msa1351990 | MtrunA17_Chr1g0157731 | 44.444 | 135 | 70 | 2 | 61 | 191 | 58 | 191 | 1.73e-32 | 129 |
Msa1351990 | MtrunA17_Chr3g0139671 | 42.963 | 135 | 72 | 2 | 61 | 191 | 52 | 185 | 2.25e-32 | 128 |
Msa1351990 | MtrunA17_Chr7g0238631 | 53.465 | 101 | 47 | 0 | 91 | 191 | 113 | 213 | 9.30e-32 | 125 |
Msa1351990 | MtrunA17_Chr5g0429661 | 41.379 | 174 | 97 | 2 | 86 | 258 | 117 | 286 | 3.08e-31 | 121 |
Msa1351990 | MtrunA17_Chr5g0437321 | 52.632 | 95 | 45 | 0 | 91 | 185 | 19 | 113 | 3.41e-31 | 119 |
Msa1351990 | MtrunA17_Chr3g0117511 | 38.068 | 176 | 102 | 4 | 91 | 262 | 183 | 355 | 6.36e-29 | 116 |
Msa1351990 | MtrunA17_Chr7g0228401 | 31.154 | 260 | 154 | 6 | 50 | 290 | 236 | 489 | 7.99e-27 | 111 |
Msa1351990 | MtrunA17_Chr4g0058991 | 31.746 | 189 | 118 | 2 | 28 | 216 | 157 | 334 | 1.78e-26 | 109 |
Msa1351990 | MtrunA17_Chr3g0103281 | 46.078 | 102 | 54 | 1 | 91 | 191 | 14 | 115 | 2.40e-26 | 107 |
Msa1351990 | MtrunA17_Chr5g0397841 | 52.174 | 92 | 44 | 0 | 94 | 185 | 113 | 204 | 3.48e-26 | 108 |
Msa1351990 | MtrunA17_Chr4g0022901 | 48.039 | 102 | 52 | 1 | 91 | 191 | 15 | 116 | 3.82e-26 | 105 |
Msa1351990 | MtrunA17_Chr3g0099131 | 44.545 | 110 | 60 | 1 | 91 | 199 | 43 | 152 | 6.08e-26 | 108 |
Msa1351990 | MtrunA17_Chr4g0022911 | 48.039 | 102 | 52 | 1 | 91 | 191 | 15 | 116 | 1.19e-25 | 104 |
Msa1351990 | MtrunA17_Chr7g0228531 | 49.505 | 101 | 50 | 1 | 91 | 191 | 220 | 319 | 1.88e-25 | 106 |
Msa1351990 | MtrunA17_Chr4g0022931 | 37.500 | 144 | 87 | 2 | 91 | 231 | 15 | 158 | 2.90e-25 | 103 |
Msa1351990 | MtrunA17_Chr2g0323351 | 47.059 | 102 | 51 | 2 | 91 | 190 | 14 | 114 | 3.52e-25 | 102 |
Msa1351990 | MtrunA17_Chr1g0203411 | 43.810 | 105 | 58 | 1 | 91 | 194 | 14 | 118 | 4.07e-25 | 103 |
Msa1351990 | MtrunA17_Chr1g0203441 | 46.602 | 103 | 52 | 2 | 91 | 191 | 15 | 116 | 9.36e-25 | 102 |
Msa1351990 | MtrunA17_Chr4g0055981 | 33.918 | 171 | 103 | 5 | 90 | 256 | 56 | 220 | 1.07e-24 | 100 |
Msa1351990 | MtrunA17_Chr5g0417821 | 45.098 | 102 | 55 | 1 | 91 | 191 | 9 | 110 | 1.31e-24 | 101 |
Msa1351990 | MtrunA17_Chr8g0360111 | 48.000 | 100 | 51 | 1 | 91 | 189 | 27 | 126 | 2.18e-24 | 100 |
Msa1351990 | MtrunA17_Chr8g0354661 | 40.602 | 133 | 76 | 2 | 68 | 199 | 18 | 148 | 2.92e-24 | 103 |
Msa1351990 | MtrunA17_Chr2g0311221 | 48.454 | 97 | 49 | 1 | 91 | 186 | 16 | 112 | 3.67e-24 | 101 |
Msa1351990 | MtrunA17_Chr5g0434911 | 44.118 | 102 | 56 | 1 | 91 | 191 | 23 | 124 | 4.27e-24 | 100 |
Msa1351990 | MtrunA17_Chr6g0470971 | 42.718 | 103 | 56 | 2 | 91 | 191 | 16 | 117 | 8.68e-24 | 99.4 |
Msa1351990 | MtrunA17_Chr7g0220341 | 40.496 | 121 | 69 | 1 | 74 | 191 | 10 | 130 | 9.08e-24 | 99.4 |
Msa1351990 | MtrunA17_Chr3g0115821 | 43.103 | 116 | 58 | 3 | 83 | 191 | 1 | 115 | 9.56e-24 | 100 |
Msa1351990 | MtrunA17_Chr3g0080861 | 42.727 | 110 | 62 | 1 | 91 | 199 | 39 | 148 | 1.16e-23 | 102 |
Msa1351990 | MtrunA17_Chr2g0322521 | 45.238 | 126 | 62 | 3 | 76 | 199 | 20 | 140 | 1.64e-23 | 100 |
Msa1351990 | MtrunA17_Chr1g0187761 | 31.111 | 225 | 111 | 6 | 91 | 273 | 14 | 236 | 1.87e-23 | 97.8 |
Msa1351990 | MtrunA17_Chr4g0048511 | 46.078 | 102 | 54 | 1 | 91 | 191 | 15 | 116 | 2.16e-23 | 99.8 |
Msa1351990 | MtrunA17_Chr5g0434831 | 43.137 | 102 | 57 | 1 | 91 | 191 | 9 | 110 | 3.14e-23 | 95.5 |
Msa1351990 | MtrunA17_Chr5g0434841 | 44.118 | 102 | 56 | 1 | 91 | 191 | 22 | 123 | 3.22e-23 | 98.6 |
Msa1351990 | MtrunA17_Chr1g0167691 | 43.137 | 102 | 57 | 1 | 91 | 191 | 14 | 115 | 3.95e-23 | 97.1 |
Msa1351990 | MtrunA17_Chr7g0228991 | 43.137 | 102 | 57 | 1 | 91 | 191 | 31 | 132 | 4.25e-23 | 97.4 |
Msa1351990 | MtrunA17_Chr1g0193801 | 39.344 | 122 | 73 | 1 | 85 | 205 | 8 | 129 | 4.26e-23 | 99.4 |
Msa1351990 | MtrunA17_Chr7g0274581 | 45.098 | 102 | 55 | 1 | 91 | 191 | 14 | 115 | 5.43e-23 | 95.5 |
Msa1351990 | MtrunA17_Chr7g0270891 | 38.525 | 122 | 74 | 1 | 85 | 205 | 8 | 129 | 6.69e-23 | 98.6 |
Msa1351990 | MtrunA17_Chr1g0192411 | 36.765 | 136 | 85 | 1 | 91 | 225 | 14 | 149 | 7.64e-23 | 99.0 |
Msa1351990 | MtrunA17_Chr5g0434931 | 42.157 | 102 | 58 | 1 | 91 | 191 | 37 | 138 | 1.01e-22 | 96.7 |
Msa1351990 | MtrunA17_Chr4g0022891 | 30.942 | 223 | 122 | 7 | 91 | 287 | 14 | 230 | 1.02e-22 | 95.5 |
Msa1351990 | MtrunA17_Chr1g0154031 | 43.636 | 110 | 61 | 1 | 91 | 199 | 78 | 187 | 1.42e-22 | 98.2 |
Msa1351990 | MtrunA17_Chr4g0058631 | 35.938 | 128 | 81 | 1 | 91 | 217 | 14 | 141 | 1.50e-22 | 97.4 |
Msa1351990 | MtrunA17_Chr2g0281071 | 44.118 | 102 | 56 | 1 | 91 | 191 | 15 | 116 | 1.67e-22 | 97.1 |
Msa1351990 | MtrunA17_Chr2g0323411 | 46.078 | 102 | 54 | 1 | 91 | 191 | 14 | 115 | 1.74e-22 | 96.7 |
Msa1351990 | MtrunA17_Chr3g0117091 | 39.535 | 129 | 73 | 3 | 91 | 215 | 14 | 141 | 1.94e-22 | 97.1 |
Msa1351990 | MtrunA17_Chr2g0309911 | 42.718 | 103 | 56 | 2 | 91 | 191 | 13 | 114 | 2.50e-22 | 95.9 |
Msa1351990 | MtrunA17_Chr6g0452271 | 43.137 | 102 | 57 | 1 | 91 | 191 | 14 | 115 | 2.55e-22 | 96.3 |
Msa1351990 | MtrunA17_Chr1g0193371 | 38.211 | 123 | 73 | 2 | 85 | 205 | 8 | 129 | 2.58e-22 | 96.7 |
Msa1351990 | MtrunA17_Chr7g0228481 | 48.958 | 96 | 48 | 1 | 91 | 186 | 220 | 314 | 2.90e-22 | 97.4 |
Msa1351990 | MtrunA17_Chr4g0037141 | 32.934 | 167 | 102 | 4 | 83 | 240 | 1 | 166 | 5.77e-22 | 94.4 |
Msa1351990 | MtrunA17_Chr1g0211161 | 38.983 | 118 | 69 | 2 | 91 | 206 | 15 | 131 | 6.74e-22 | 93.2 |
Msa1351990 | MtrunA17_Chr8g0342541 | 40.517 | 116 | 61 | 3 | 83 | 191 | 1 | 115 | 9.07e-22 | 95.1 |
Msa1351990 | MtrunA17_Chr5g0435101 | 41.748 | 103 | 59 | 1 | 90 | 191 | 12 | 114 | 9.70e-22 | 92.0 |
Msa1351990 | MtrunA17_Chr5g0397231 | 42.593 | 108 | 56 | 2 | 83 | 184 | 1 | 108 | 1.16e-21 | 94.7 |
Msa1351990 | MtrunA17_Chr1g0209661 | 40.000 | 105 | 62 | 1 | 91 | 194 | 29 | 133 | 1.38e-21 | 94.0 |
Msa1351990 | MtrunA17_Chr2g0327821 | 34.615 | 156 | 90 | 4 | 91 | 244 | 8 | 153 | 1.66e-21 | 92.0 |
Msa1351990 | MtrunA17_Chr4g0032401 | 42.157 | 102 | 58 | 1 | 91 | 191 | 19 | 120 | 1.67e-21 | 94.0 |
Msa1351990 | MtrunA17_Chr2g0330041 | 43.119 | 109 | 54 | 3 | 83 | 184 | 1 | 108 | 1.74e-21 | 94.7 |
Msa1351990 | MtrunA17_Chr2g0328771 | 43.689 | 103 | 55 | 2 | 91 | 191 | 22 | 123 | 1.79e-21 | 93.6 |
Msa1351990 | MtrunA17_Chr5g0400821 | 41.071 | 112 | 59 | 3 | 91 | 195 | 14 | 125 | 1.80e-21 | 93.6 |
Msa1351990 | MtrunA17_Chr4g0070611 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 1.87e-21 | 93.6 |
Msa1351990 | MtrunA17_Chr4g0030881 | 40.678 | 118 | 59 | 3 | 87 | 195 | 5 | 120 | 1.95e-21 | 92.4 |
Msa1351990 | MtrunA17_Chr1g0180391 | 37.162 | 148 | 80 | 4 | 91 | 230 | 21 | 163 | 1.99e-21 | 91.7 |
Msa1351990 | MtrunA17_Chr7g0228891 | 42.718 | 103 | 56 | 2 | 91 | 191 | 14 | 115 | 3.00e-21 | 92.0 |
Msa1351990 | MtrunA17_Chr5g0395281 | 43.689 | 103 | 55 | 2 | 91 | 191 | 14 | 115 | 3.02e-21 | 92.8 |
Msa1351990 | MtrunA17_Chr4g0070641 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 3.15e-21 | 89.7 |
Msa1351990 | MtrunA17_Chr5g0410961 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 3.26e-21 | 93.2 |
Msa1351990 | MtrunA17_Chr8g0385321 | 38.261 | 115 | 65 | 2 | 83 | 191 | 1 | 115 | 3.82e-21 | 92.8 |
Msa1351990 | MtrunA17_Chr7g0261281 | 42.718 | 103 | 56 | 2 | 91 | 191 | 14 | 115 | 4.38e-21 | 91.7 |
Msa1351990 | MtrunA17_Chr8g0342521 | 39.655 | 116 | 62 | 3 | 83 | 191 | 1 | 115 | 4.57e-21 | 92.8 |
Msa1351990 | MtrunA17_Chr1g0151941 | 42.718 | 103 | 57 | 2 | 91 | 191 | 14 | 116 | 4.98e-21 | 91.3 |
Msa1351990 | MtrunA17_Chr7g0217221 | 40.196 | 102 | 60 | 1 | 91 | 191 | 14 | 115 | 5.03e-21 | 91.7 |
Msa1351990 | MtrunA17_Chr7g0271241 | 42.718 | 103 | 56 | 2 | 85 | 185 | 8 | 109 | 5.33e-21 | 93.2 |
Msa1351990 | MtrunA17_Chr5g0441131 | 40.566 | 106 | 60 | 3 | 91 | 194 | 11 | 115 | 5.92e-21 | 89.4 |
Msa1351990 | MtrunA17_Chr1g0177901 | 49.398 | 83 | 42 | 0 | 102 | 184 | 5 | 87 | 6.03e-21 | 89.7 |
Msa1351990 | MtrunA17_Chr8g0387421 | 40.566 | 106 | 62 | 1 | 91 | 195 | 14 | 119 | 6.75e-21 | 92.0 |
Msa1351990 | MtrunA17_Chr3g0135311 | 38.655 | 119 | 67 | 3 | 91 | 203 | 14 | 132 | 7.41e-21 | 92.4 |
Msa1351990 | MtrunA17_Chr4g0028311 | 43.269 | 104 | 55 | 3 | 91 | 191 | 14 | 116 | 8.16e-21 | 92.0 |
Msa1351990 | MtrunA17_Chr8g0342481 | 41.026 | 117 | 60 | 4 | 83 | 191 | 1 | 116 | 9.13e-21 | 92.8 |
Msa1351990 | MtrunA17_Chr4g0022881 | 41.237 | 97 | 54 | 2 | 91 | 185 | 14 | 109 | 1.26e-20 | 89.4 |
Msa1351990 | MtrunA17_Chr1g0167661 | 41.176 | 102 | 59 | 1 | 91 | 191 | 14 | 115 | 1.29e-20 | 90.1 |
Msa1351990 | MtrunA17_Chr8g0334881 | 45.714 | 105 | 55 | 2 | 91 | 193 | 12 | 116 | 1.37e-20 | 91.3 |
Msa1351990 | MtrunA17_Chr1g0194301 | 32.663 | 199 | 114 | 8 | 91 | 273 | 35 | 229 | 1.39e-20 | 90.5 |
Msa1351990 | MtrunA17_Chr7g0275911 | 36.134 | 119 | 70 | 2 | 83 | 195 | 1 | 119 | 1.54e-20 | 89.7 |
Msa1351990 | MtrunA17_Chr7g0240821 | 43.000 | 100 | 54 | 2 | 94 | 191 | 6 | 104 | 1.63e-20 | 89.4 |
Msa1351990 | MtrunA17_Chr1g0186061 | 41.905 | 105 | 58 | 2 | 91 | 193 | 22 | 125 | 1.68e-20 | 89.7 |
Msa1351990 | MtrunA17_Chr8g0346561 | 36.220 | 127 | 73 | 3 | 76 | 198 | 3 | 125 | 1.84e-20 | 90.5 |
Msa1351990 | MtrunA17_Chr8g0343831 | 37.500 | 112 | 69 | 1 | 87 | 197 | 6 | 117 | 2.19e-20 | 89.4 |
Msa1351990 | MtrunA17_Chr3g0088461 | 42.727 | 110 | 61 | 2 | 83 | 191 | 17 | 125 | 2.22e-20 | 90.9 |
Msa1351990 | MtrunA17_Chr4g0039971 | 41.748 | 103 | 57 | 2 | 91 | 191 | 15 | 116 | 2.46e-20 | 90.9 |
Msa1351990 | MtrunA17_Chr4g0042671 | 41.026 | 117 | 64 | 2 | 76 | 191 | 3 | 115 | 2.54e-20 | 91.7 |
Msa1351990 | MtrunA17_Chr3g0131121 | 31.818 | 176 | 92 | 6 | 83 | 250 | 1 | 156 | 2.69e-20 | 90.1 |
Msa1351990 | MtrunA17_Chr3g0121241 | 37.069 | 116 | 72 | 1 | 91 | 205 | 44 | 159 | 2.70e-20 | 90.1 |
Msa1351990 | MtrunA17_Chr4g0054391 | 44.330 | 97 | 52 | 2 | 91 | 185 | 14 | 110 | 2.71e-20 | 89.7 |
Msa1351990 | MtrunA17_Chr7g0228231 | 26.882 | 186 | 122 | 2 | 91 | 275 | 16 | 188 | 2.99e-20 | 87.8 |
Msa1351990 | MtrunA17_Chr7g0233061 | 41.379 | 116 | 57 | 3 | 71 | 186 | 169 | 273 | 3.00e-20 | 90.9 |
Msa1351990 | MtrunA17_Chr1g0152011 | 37.815 | 119 | 67 | 3 | 91 | 202 | 14 | 132 | 3.89e-20 | 90.1 |
Msa1351990 | MtrunA17_Chr6g0453211 | 41.237 | 97 | 56 | 1 | 91 | 186 | 14 | 110 | 4.20e-20 | 89.7 |
Msa1351990 | MtrunA17_Chr2g0327351 | 44.898 | 98 | 52 | 2 | 91 | 186 | 14 | 111 | 4.27e-20 | 89.7 |
Msa1351990 | MtrunA17_Chr6g0453471 | 38.000 | 150 | 82 | 3 | 76 | 224 | 3 | 142 | 4.32e-20 | 90.5 |
Msa1351990 | MtrunA17_Chr7g0264641 | 39.655 | 116 | 63 | 3 | 83 | 191 | 1 | 116 | 4.42e-20 | 89.0 |
Msa1351990 | MtrunA17_Chr5g0440781 | 42.857 | 98 | 54 | 2 | 91 | 186 | 14 | 111 | 4.72e-20 | 87.0 |
Msa1351990 | MtrunA17_Chr4g0044421 | 42.268 | 97 | 53 | 2 | 90 | 184 | 13 | 108 | 5.26e-20 | 87.0 |
Msa1351990 | MtrunA17_Chr5g0440761 | 41.905 | 105 | 56 | 3 | 91 | 193 | 14 | 115 | 6.49e-20 | 88.2 |
Msa1351990 | MtrunA17_Chr7g0254411 | 40.541 | 111 | 61 | 2 | 82 | 191 | 9 | 115 | 7.84e-20 | 89.4 |
Msa1351990 | MtrunA17_Chr5g0441141 | 42.857 | 98 | 54 | 2 | 91 | 186 | 14 | 111 | 8.72e-20 | 88.2 |
Msa1351990 | MtrunA17_Chr4g0013361 | 44.643 | 112 | 57 | 3 | 84 | 193 | 8 | 116 | 1.51e-19 | 87.8 |
Msa1351990 | MtrunA17_Chr4g0060721 | 39.216 | 102 | 61 | 1 | 91 | 191 | 15 | 116 | 1.72e-19 | 88.2 |
Msa1351990 | MtrunA17_Chr7g0217741 | 40.678 | 118 | 63 | 3 | 76 | 191 | 3 | 115 | 1.88e-19 | 87.8 |
Msa1351990 | MtrunA17_Chr1g0194951 | 37.288 | 118 | 67 | 3 | 76 | 191 | 3 | 115 | 1.95e-19 | 88.6 |
Msa1351990 | MtrunA17_Chr3g0092401 | 39.216 | 102 | 61 | 1 | 91 | 191 | 15 | 116 | 1.97e-19 | 87.8 |
Msa1351990 | MtrunA17_Chr1g0168661 | 43.000 | 100 | 54 | 2 | 87 | 184 | 19 | 117 | 4.46e-19 | 85.9 |
Msa1351990 | MtrunA17_Chr7g0238651 | 38.393 | 112 | 66 | 1 | 86 | 194 | 2 | 113 | 1.14e-18 | 86.3 |
Msa1351990 | MtrunA17_Chr4g0072751 | 42.857 | 98 | 54 | 2 | 91 | 186 | 14 | 111 | 1.18e-18 | 86.3 |
Msa1351990 | MtrunA17_Chr5g0434571 | 32.335 | 167 | 98 | 4 | 82 | 238 | 45 | 206 | 1.39e-18 | 85.9 |
Msa1351990 | MtrunA17_Chr4g0068921 | 42.268 | 97 | 55 | 1 | 91 | 186 | 26 | 122 | 3.23e-18 | 82.0 |
Msa1351990 | MtrunA17_Chr5g0434901 | 53.226 | 62 | 29 | 0 | 124 | 185 | 9 | 70 | 3.90e-18 | 79.3 |
Msa1351990 | MtrunA17_Chr3g0110351 | 41.071 | 112 | 59 | 3 | 82 | 191 | 9 | 115 | 4.16e-18 | 84.0 |
Msa1351990 | MtrunA17_Chr1g0194291 | 37.273 | 110 | 67 | 2 | 91 | 198 | 23 | 132 | 5.67e-18 | 82.8 |
Msa1351990 | MtrunA17_Chr2g0293911 | 39.091 | 110 | 65 | 2 | 91 | 198 | 26 | 135 | 5.83e-18 | 84.0 |
Msa1351990 | MtrunA17_Chr4g0068061 | 37.255 | 102 | 63 | 1 | 91 | 191 | 14 | 115 | 7.32e-18 | 83.6 |
Msa1351990 | MtrunA17_Chr4g0057031 | 39.806 | 103 | 59 | 2 | 91 | 191 | 14 | 115 | 9.12e-18 | 82.4 |
Msa1351990 | MtrunA17_Chr6g0450101 | 41.053 | 95 | 55 | 1 | 91 | 184 | 16 | 110 | 1.41e-17 | 80.5 |
Msa1351990 | MtrunA17_Chr7g0247131 | 43.373 | 83 | 47 | 0 | 124 | 206 | 14 | 96 | 1.58e-17 | 81.6 |
Msa1351990 | MtrunA17_Chr8g0349261 | 41.346 | 104 | 57 | 3 | 91 | 191 | 15 | 117 | 1.60e-17 | 82.0 |
Msa1351990 | MtrunA17_Chr5g0416341 | 31.250 | 144 | 77 | 2 | 94 | 228 | 29 | 159 | 2.79e-17 | 82.8 |
Msa1351990 | MtrunA17_Chr7g0229101 | 30.625 | 160 | 84 | 3 | 124 | 256 | 8 | 167 | 3.79e-17 | 79.3 |
Msa1351990 | MtrunA17_Chr8g0362231 | 35.714 | 98 | 63 | 0 | 94 | 191 | 25 | 122 | 6.66e-17 | 81.6 |
Msa1351990 | MtrunA17_Chr3g0099141 | 43.902 | 82 | 45 | 1 | 91 | 171 | 42 | 123 | 4.75e-16 | 74.3 |
Msa1351990 | MtrunA17_Chr7g0229131 | 33.065 | 124 | 77 | 2 | 120 | 237 | 2 | 125 | 1.08e-15 | 74.3 |
Msa1351990 | MtrunA17_Chr6g0487491 | 38.393 | 112 | 59 | 3 | 91 | 192 | 14 | 125 | 1.38e-15 | 75.9 |
Msa1351990 | MtrunA17_Chr5g0425591 | 45.122 | 82 | 41 | 3 | 91 | 169 | 11 | 91 | 2.04e-15 | 71.2 |
Msa1351990 | MtrunA17_Chr3g0093811 | 46.377 | 69 | 35 | 2 | 124 | 191 | 18 | 85 | 2.26e-14 | 72.4 |
Msa1351990 | MtrunA17_Chr7g0269831 | 38.739 | 111 | 63 | 2 | 82 | 191 | 9 | 115 | 3.45e-14 | 73.2 |
Msa1351990 | MtrunA17_Chr6g0483051 | 37.363 | 91 | 56 | 1 | 94 | 184 | 72 | 161 | 4.80e-14 | 73.6 |
Msa1351990 | MtrunA17_Chr2g0323321 | 41.250 | 80 | 44 | 2 | 91 | 168 | 13 | 91 | 9.84e-14 | 67.0 |
Msa1351990 | MtrunA17_Chr4g0042611 | 41.333 | 75 | 43 | 1 | 91 | 164 | 14 | 88 | 3.39e-13 | 64.7 |
Msa1351990 | MtrunA17_Chr5g0395221 | 42.667 | 75 | 42 | 1 | 91 | 164 | 14 | 88 | 1.31e-12 | 63.2 |
Msa1351990 | MtrunA17_Chr8g0342511 | 38.636 | 88 | 46 | 3 | 83 | 163 | 1 | 87 | 2.34e-12 | 62.8 |
Msa1351990 | MtrunA17_Chr8g0342531 | 40.260 | 77 | 43 | 2 | 91 | 165 | 14 | 89 | 6.92e-12 | 63.2 |
Msa1351990 | MtrunA17_Chr7g0274481 | 40.000 | 85 | 50 | 1 | 92 | 176 | 8 | 91 | 9.40e-12 | 66.6 |
Msa1351990 | MtrunA17_Chr3g0104491 | 50.000 | 52 | 26 | 0 | 141 | 192 | 17 | 68 | 1.64e-11 | 64.3 |
Msa1351990 | MtrunA17_Chr5g0421201 | 50.000 | 50 | 25 | 0 | 143 | 192 | 12 | 61 | 2.07e-11 | 62.4 |
Msa1351990 | MtrunA17_Chr6g0453751 | 41.573 | 89 | 42 | 4 | 91 | 169 | 22 | 110 | 2.32e-11 | 60.8 |
Msa1351990 | MtrunA17_Chr7g0233151 | 46.154 | 52 | 28 | 0 | 141 | 192 | 1 | 52 | 2.70e-11 | 61.6 |
Msa1351990 | MtrunA17_Chr8g0342461 | 41.026 | 78 | 42 | 3 | 91 | 165 | 14 | 90 | 3.05e-11 | 60.8 |
Msa1351990 | MtrunA17_Chr3g0104501 | 54.902 | 51 | 23 | 0 | 91 | 141 | 133 | 183 | 4.84e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1351990 | AT5G17800.1 | 43.158 | 285 | 104 | 6 | 86 | 362 | 88 | 322 | 6.77e-71 | 224 |
Msa1351990 | AT1G69560.1 | 46.739 | 276 | 94 | 9 | 90 | 363 | 106 | 330 | 2.10e-69 | 221 |
Msa1351990 | AT1G69560.2 | 46.739 | 276 | 94 | 9 | 90 | 363 | 122 | 346 | 2.50e-69 | 221 |
Msa1351990 | AT1G26780.1 | 77.586 | 116 | 26 | 0 | 88 | 203 | 95 | 210 | 3.02e-66 | 211 |
Msa1351990 | AT1G26780.2 | 77.586 | 116 | 26 | 0 | 88 | 203 | 95 | 210 | 9.85e-66 | 212 |
Msa1351990 | AT1G17950.1 | 75.926 | 108 | 26 | 0 | 88 | 195 | 2 | 109 | 6.72e-61 | 196 |
Msa1351990 | AT3G29020.1 | 71.795 | 117 | 33 | 0 | 86 | 202 | 60 | 176 | 1.08e-60 | 195 |
Msa1351990 | AT3G29020.2 | 71.795 | 117 | 33 | 0 | 86 | 202 | 62 | 178 | 5.93e-60 | 196 |
Msa1351990 | AT4G33450.1 | 76.415 | 106 | 25 | 0 | 89 | 194 | 17 | 122 | 2.85e-58 | 189 |
Msa1351990 | AT1G73410.1 | 43.636 | 275 | 116 | 8 | 88 | 361 | 3 | 239 | 4.95e-58 | 189 |
Msa1351990 | AT1G73410.2 | 79.439 | 107 | 22 | 0 | 88 | 194 | 3 | 109 | 5.55e-57 | 184 |
Msa1351990 | AT5G39700.1 | 64.423 | 104 | 37 | 0 | 92 | 195 | 57 | 160 | 4.16e-43 | 148 |
Msa1351990 | AT5G67300.1 | 43.713 | 167 | 80 | 4 | 91 | 250 | 6 | 165 | 6.37e-38 | 138 |
Msa1351990 | AT4G37260.1 | 41.875 | 160 | 78 | 3 | 91 | 248 | 13 | 159 | 2.46e-37 | 137 |
Msa1351990 | AT3G55730.1 | 54.808 | 104 | 47 | 0 | 91 | 194 | 56 | 159 | 2.61e-36 | 136 |
Msa1351990 | AT2G39880.1 | 53.043 | 115 | 52 | 1 | 84 | 198 | 45 | 157 | 5.14e-36 | 134 |
Msa1351990 | AT2G23290.1 | 53.465 | 101 | 47 | 0 | 91 | 191 | 13 | 113 | 3.24e-35 | 131 |
Msa1351990 | AT3G50060.1 | 53.465 | 101 | 47 | 0 | 91 | 191 | 6 | 106 | 7.75e-35 | 130 |
Msa1351990 | AT3G09230.1 | 54.455 | 101 | 46 | 0 | 91 | 191 | 55 | 155 | 1.80e-34 | 131 |
Msa1351990 | AT3G09370.1 | 52.475 | 101 | 48 | 0 | 91 | 191 | 130 | 230 | 1.45e-31 | 125 |
Msa1351990 | AT3G09370.2 | 52.475 | 101 | 48 | 0 | 91 | 191 | 135 | 235 | 1.46e-31 | 125 |
Msa1351990 | AT3G09370.3 | 52.475 | 101 | 48 | 0 | 91 | 191 | 143 | 243 | 2.17e-31 | 124 |
Msa1351990 | AT5G02320.1 | 52.475 | 101 | 48 | 0 | 91 | 191 | 127 | 227 | 3.44e-31 | 124 |
Msa1351990 | AT5G02320.2 | 52.475 | 101 | 48 | 0 | 91 | 191 | 127 | 227 | 3.44e-31 | 124 |
Msa1351990 | AT5G02320.3 | 52.475 | 101 | 48 | 0 | 91 | 191 | 67 | 167 | 4.49e-31 | 123 |
Msa1351990 | AT4G32730.5 | 41.481 | 135 | 74 | 2 | 61 | 191 | 54 | 187 | 2.10e-30 | 123 |
Msa1351990 | AT4G32730.4 | 41.481 | 135 | 74 | 2 | 61 | 191 | 54 | 187 | 2.10e-30 | 123 |
Msa1351990 | AT4G32730.3 | 41.481 | 135 | 74 | 2 | 61 | 191 | 54 | 187 | 2.10e-30 | 123 |
Msa1351990 | AT4G32730.2 | 41.481 | 135 | 74 | 2 | 61 | 191 | 54 | 187 | 2.10e-30 | 123 |
Msa1351990 | AT4G32730.1 | 41.481 | 135 | 74 | 2 | 61 | 191 | 54 | 187 | 2.25e-30 | 122 |
Msa1351990 | AT5G11510.3 | 40.000 | 135 | 76 | 2 | 61 | 191 | 48 | 181 | 9.12e-30 | 121 |
Msa1351990 | AT5G11510.1 | 40.000 | 135 | 76 | 2 | 61 | 191 | 48 | 181 | 9.12e-30 | 121 |
Msa1351990 | AT5G11510.4 | 40.000 | 135 | 76 | 2 | 61 | 191 | 48 | 181 | 9.12e-30 | 121 |
Msa1351990 | AT5G11050.1 | 35.644 | 202 | 93 | 5 | 91 | 290 | 105 | 271 | 1.01e-29 | 119 |
Msa1351990 | AT5G11510.2 | 40.000 | 135 | 76 | 2 | 61 | 191 | 48 | 181 | 1.02e-29 | 120 |
Msa1351990 | AT5G11510.5 | 40.000 | 135 | 76 | 2 | 61 | 191 | 48 | 181 | 1.09e-29 | 120 |
Msa1351990 | AT5G58850.1 | 50.000 | 112 | 56 | 0 | 80 | 191 | 94 | 205 | 1.11e-29 | 119 |
Msa1351990 | AT5G40360.1 | 40.000 | 150 | 87 | 2 | 46 | 192 | 110 | 259 | 4.76e-29 | 115 |
Msa1351990 | AT3G27785.1 | 50.000 | 102 | 51 | 0 | 91 | 192 | 189 | 290 | 1.90e-27 | 112 |
Msa1351990 | AT2G25230.1 | 49.495 | 99 | 48 | 2 | 93 | 190 | 28 | 125 | 4.24e-27 | 107 |
Msa1351990 | AT4G18770.1 | 42.857 | 126 | 72 | 0 | 91 | 216 | 217 | 342 | 5.05e-27 | 111 |
Msa1351990 | AT3G11440.2 | 42.735 | 117 | 66 | 1 | 84 | 199 | 36 | 152 | 2.31e-26 | 110 |
Msa1351990 | AT3G11440.3 | 42.735 | 117 | 66 | 1 | 84 | 199 | 36 | 152 | 3.03e-26 | 110 |
Msa1351990 | AT3G11440.4 | 42.735 | 117 | 66 | 1 | 84 | 199 | 36 | 152 | 3.03e-26 | 110 |
Msa1351990 | AT3G11440.1 | 42.735 | 117 | 66 | 1 | 84 | 199 | 36 | 152 | 3.03e-26 | 110 |
Msa1351990 | AT3G48920.1 | 41.463 | 123 | 69 | 2 | 91 | 210 | 20 | 142 | 7.91e-26 | 104 |
Msa1351990 | AT1G79180.1 | 46.602 | 103 | 52 | 2 | 91 | 191 | 16 | 117 | 4.70e-25 | 103 |
Msa1351990 | AT2G32460.1 | 45.045 | 111 | 58 | 2 | 91 | 199 | 20 | 129 | 6.23e-25 | 105 |
Msa1351990 | AT2G32460.2 | 45.045 | 111 | 58 | 2 | 91 | 199 | 8 | 117 | 6.85e-25 | 105 |
Msa1351990 | AT5G40430.1 | 30.396 | 227 | 138 | 6 | 46 | 262 | 4 | 220 | 6.87e-25 | 102 |
Msa1351990 | AT4G28110.1 | 43.478 | 115 | 59 | 2 | 83 | 191 | 1 | 115 | 8.11e-25 | 102 |
Msa1351990 | AT5G40330.1 | 43.137 | 102 | 57 | 1 | 91 | 191 | 14 | 115 | 9.34e-25 | 100 |
Msa1351990 | AT5G06100.1 | 43.636 | 110 | 61 | 1 | 91 | 199 | 34 | 143 | 1.30e-24 | 104 |
Msa1351990 | AT2G26950.1 | 34.524 | 168 | 96 | 4 | 83 | 243 | 10 | 170 | 1.56e-24 | 103 |
Msa1351990 | AT4G25560.1 | 43.363 | 113 | 61 | 2 | 81 | 191 | 2 | 113 | 1.59e-24 | 102 |
Msa1351990 | AT5G06100.5 | 43.636 | 110 | 61 | 1 | 91 | 199 | 34 | 143 | 1.70e-24 | 105 |
Msa1351990 | AT5G06100.2 | 43.636 | 110 | 61 | 1 | 91 | 199 | 34 | 143 | 1.70e-24 | 105 |
Msa1351990 | AT5G06100.3 | 43.636 | 110 | 61 | 1 | 91 | 199 | 34 | 143 | 1.70e-24 | 105 |
Msa1351990 | AT5G06100.4 | 43.636 | 110 | 61 | 1 | 91 | 199 | 34 | 143 | 1.70e-24 | 105 |
Msa1351990 | AT4G26930.1 | 43.636 | 110 | 61 | 1 | 91 | 199 | 21 | 130 | 1.71e-24 | 103 |
Msa1351990 | AT3G27920.1 | 44.118 | 102 | 56 | 1 | 91 | 191 | 16 | 117 | 1.81e-24 | 100 |
Msa1351990 | AT5G14750.1 | 43.137 | 102 | 57 | 1 | 91 | 191 | 18 | 119 | 1.96e-24 | 99.8 |
Msa1351990 | AT3G23250.1 | 34.637 | 179 | 109 | 3 | 91 | 268 | 14 | 185 | 2.00e-24 | 101 |
Msa1351990 | AT1G63910.1 | 39.695 | 131 | 73 | 2 | 83 | 207 | 1 | 131 | 4.11e-24 | 102 |
Msa1351990 | AT3G12720.1 | 45.631 | 103 | 53 | 2 | 91 | 191 | 24 | 125 | 4.12e-24 | 101 |
Msa1351990 | AT1G18570.1 | 44.118 | 102 | 56 | 1 | 91 | 191 | 15 | 116 | 5.44e-24 | 101 |
Msa1351990 | AT5G56110.1 | 46.078 | 102 | 54 | 1 | 91 | 191 | 14 | 115 | 9.13e-24 | 100 |
Msa1351990 | AT5G61420.2 | 39.007 | 141 | 84 | 2 | 91 | 229 | 14 | 154 | 2.43e-23 | 100 |
Msa1351990 | AT1G74080.1 | 35.802 | 162 | 97 | 3 | 91 | 250 | 14 | 170 | 2.52e-23 | 99.4 |
Msa1351990 | AT3G28470.1 | 49.474 | 95 | 47 | 1 | 91 | 184 | 14 | 108 | 2.85e-23 | 99.0 |
Msa1351990 | AT1G56160.1 | 44.660 | 103 | 54 | 2 | 91 | 191 | 16 | 117 | 3.12e-23 | 98.6 |
Msa1351990 | AT2G31180.1 | 44.118 | 102 | 56 | 1 | 91 | 191 | 14 | 115 | 3.47e-23 | 97.4 |
Msa1351990 | AT4G05100.1 | 42.241 | 116 | 60 | 2 | 83 | 191 | 1 | 116 | 4.30e-23 | 98.6 |
Msa1351990 | AT5G07700.1 | 37.736 | 159 | 91 | 3 | 91 | 242 | 14 | 171 | 5.79e-23 | 98.6 |
Msa1351990 | AT5G07700.2 | 37.736 | 159 | 91 | 3 | 91 | 242 | 14 | 171 | 5.79e-23 | 98.6 |
Msa1351990 | AT5G54230.1 | 43.137 | 102 | 57 | 1 | 91 | 191 | 14 | 115 | 6.55e-23 | 98.2 |
Msa1351990 | AT5G65230.1 | 45.631 | 103 | 53 | 2 | 91 | 191 | 14 | 115 | 6.69e-23 | 97.8 |
Msa1351990 | AT1G09540.1 | 38.462 | 143 | 84 | 3 | 85 | 224 | 8 | 149 | 7.22e-23 | 98.6 |
Msa1351990 | AT2G26960.1 | 43.243 | 111 | 62 | 1 | 90 | 199 | 21 | 131 | 1.06e-22 | 99.0 |
Msa1351990 | AT5G60890.1 | 39.655 | 116 | 69 | 1 | 91 | 205 | 14 | 129 | 1.21e-22 | 97.1 |
Msa1351990 | AT3G12820.1 | 44.660 | 103 | 54 | 2 | 91 | 191 | 16 | 117 | 1.30e-22 | 95.5 |
Msa1351990 | AT5G62470.1 | 41.584 | 101 | 59 | 0 | 91 | 191 | 14 | 114 | 1.34e-22 | 97.8 |
Msa1351990 | AT3G13890.2 | 33.158 | 190 | 117 | 5 | 83 | 262 | 1 | 190 | 1.35e-22 | 97.8 |
Msa1351990 | AT5G10280.1 | 44.660 | 103 | 54 | 2 | 91 | 191 | 14 | 115 | 1.36e-22 | 97.4 |
Msa1351990 | AT4G00540.2 | 46.154 | 104 | 53 | 1 | 91 | 191 | 103 | 206 | 1.63e-22 | 98.2 |
Msa1351990 | AT1G74430.1 | 37.600 | 125 | 77 | 1 | 91 | 214 | 14 | 138 | 1.71e-22 | 95.9 |
Msa1351990 | AT5G52600.1 | 44.118 | 102 | 56 | 1 | 91 | 191 | 14 | 115 | 1.80e-22 | 94.4 |
Msa1351990 | AT1G16490.1 | 44.660 | 103 | 54 | 2 | 91 | 191 | 16 | 117 | 1.88e-22 | 95.9 |
Msa1351990 | AT3G30210.1 | 37.500 | 128 | 79 | 1 | 89 | 215 | 27 | 154 | 2.40e-22 | 95.9 |
Msa1351990 | AT4G00540.1 | 46.154 | 104 | 53 | 1 | 91 | 191 | 101 | 204 | 3.30e-22 | 97.8 |
Msa1351990 | AT4G17785.2 | 42.735 | 117 | 58 | 3 | 83 | 191 | 1 | 116 | 3.49e-22 | 96.7 |
Msa1351990 | AT4G17785.1 | 42.735 | 117 | 58 | 3 | 83 | 191 | 1 | 116 | 3.87e-22 | 96.7 |
Msa1351990 | AT5G52260.1 | 48.544 | 103 | 50 | 2 | 91 | 191 | 14 | 115 | 4.10e-22 | 94.7 |
Msa1351990 | AT5G55020.1 | 41.818 | 110 | 63 | 1 | 91 | 199 | 28 | 137 | 5.13e-22 | 97.8 |
Msa1351990 | AT1G57560.2 | 34.302 | 172 | 108 | 3 | 85 | 252 | 8 | 178 | 6.99e-22 | 94.4 |
Msa1351990 | AT5G26660.1 | 34.615 | 156 | 95 | 3 | 91 | 240 | 14 | 168 | 7.68e-22 | 95.5 |
Msa1351990 | AT1G22640.1 | 30.870 | 230 | 124 | 7 | 83 | 278 | 1 | 229 | 8.07e-22 | 94.0 |
Msa1351990 | AT3G47600.1 | 42.157 | 102 | 58 | 1 | 91 | 191 | 14 | 115 | 8.10e-22 | 95.1 |
Msa1351990 | AT4G38620.1 | 35.252 | 139 | 84 | 2 | 83 | 215 | 1 | 139 | 8.70e-22 | 94.4 |
Msa1351990 | AT3G13890.1 | 31.156 | 199 | 118 | 5 | 83 | 262 | 1 | 199 | 9.39e-22 | 95.5 |
Msa1351990 | AT1G35515.1 | 36.522 | 115 | 67 | 2 | 83 | 191 | 1 | 115 | 1.59e-21 | 92.0 |
Msa1351990 | AT5G07690.1 | 39.516 | 124 | 69 | 2 | 91 | 213 | 14 | 132 | 1.64e-21 | 94.4 |
Msa1351990 | AT5G57620.1 | 43.689 | 103 | 56 | 2 | 91 | 191 | 14 | 116 | 1.71e-21 | 94.4 |
Msa1351990 | AT3G53200.1 | 42.056 | 107 | 59 | 2 | 91 | 195 | 11 | 116 | 2.04e-21 | 92.4 |
Msa1351990 | AT4G01680.3 | 39.091 | 110 | 66 | 1 | 85 | 193 | 8 | 117 | 2.05e-21 | 92.4 |
Msa1351990 | AT3G02940.2 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 2.13e-21 | 93.6 |
Msa1351990 | AT4G21440.1 | 43.137 | 102 | 57 | 1 | 91 | 191 | 14 | 115 | 2.49e-21 | 94.4 |
Msa1351990 | AT1G79180.2 | 37.037 | 135 | 51 | 2 | 91 | 191 | 16 | 150 | 2.78e-21 | 93.6 |
Msa1351990 | AT5G23000.1 | 43.269 | 104 | 55 | 2 | 91 | 191 | 14 | 116 | 2.86e-21 | 93.6 |
Msa1351990 | AT5G16770.4 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 2.96e-21 | 93.6 |
Msa1351990 | AT5G16770.3 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 2.96e-21 | 93.6 |
Msa1351990 | AT3G02940.1 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 3.18e-21 | 93.6 |
Msa1351990 | AT3G02940.3 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 3.18e-21 | 93.6 |
Msa1351990 | AT5G35550.1 | 40.777 | 103 | 60 | 1 | 90 | 191 | 15 | 117 | 3.33e-21 | 92.0 |
Msa1351990 | AT1G34670.1 | 40.000 | 115 | 63 | 2 | 83 | 191 | 1 | 115 | 3.47e-21 | 94.0 |
Msa1351990 | AT5G16770.1 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 3.77e-21 | 93.6 |
Msa1351990 | AT5G16770.2 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 3.77e-21 | 93.6 |
Msa1351990 | AT5G62470.2 | 41.176 | 102 | 59 | 1 | 91 | 191 | 14 | 115 | 4.02e-21 | 93.6 |
Msa1351990 | AT4G01680.1 | 39.091 | 110 | 66 | 1 | 85 | 193 | 8 | 117 | 5.40e-21 | 93.2 |
Msa1351990 | AT4G09460.1 | 31.609 | 174 | 103 | 3 | 83 | 240 | 1 | 174 | 5.49e-21 | 90.9 |
Msa1351990 | AT1G06180.1 | 41.026 | 117 | 61 | 4 | 82 | 195 | 9 | 120 | 5.62e-21 | 91.3 |
Msa1351990 | AT1G66370.1 | 37.963 | 108 | 66 | 1 | 91 | 197 | 10 | 117 | 6.86e-21 | 90.9 |
Msa1351990 | AT5G15310.1 | 37.415 | 147 | 83 | 3 | 83 | 223 | 1 | 144 | 7.03e-21 | 92.4 |
Msa1351990 | AT5G15310.2 | 37.415 | 147 | 83 | 3 | 83 | 223 | 1 | 144 | 8.21e-21 | 92.0 |
Msa1351990 | AT3G49690.1 | 43.689 | 103 | 56 | 2 | 91 | 191 | 14 | 116 | 1.16e-20 | 91.7 |
Msa1351990 | AT3G01140.2 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 1.25e-20 | 92.0 |
Msa1351990 | AT5G12870.1 | 37.391 | 115 | 71 | 1 | 78 | 191 | 7 | 121 | 1.27e-20 | 90.9 |
Msa1351990 | AT3G46130.1 | 41.121 | 107 | 60 | 2 | 91 | 195 | 11 | 116 | 1.42e-20 | 90.5 |
Msa1351990 | AT1G57560.1 | 35.172 | 145 | 89 | 3 | 85 | 227 | 8 | 149 | 1.58e-20 | 91.3 |
Msa1351990 | AT5G59780.3 | 40.187 | 107 | 61 | 2 | 91 | 195 | 10 | 115 | 1.60e-20 | 89.7 |
Msa1351990 | AT5G14340.1 | 40.000 | 105 | 60 | 2 | 91 | 193 | 26 | 129 | 1.96e-20 | 90.5 |
Msa1351990 | AT5G14750.3 | 48.529 | 68 | 35 | 0 | 124 | 191 | 18 | 85 | 1.99e-20 | 87.8 |
Msa1351990 | AT3G01140.1 | 41.176 | 102 | 59 | 1 | 91 | 191 | 57 | 158 | 2.13e-20 | 92.0 |
Msa1351990 | AT3G60460.1 | 45.714 | 105 | 55 | 2 | 91 | 193 | 13 | 117 | 2.57e-20 | 90.5 |
Msa1351990 | AT1G18710.1 | 40.196 | 102 | 60 | 1 | 91 | 191 | 14 | 115 | 2.57e-20 | 89.7 |
Msa1351990 | AT5G15310.4 | 39.130 | 115 | 64 | 2 | 83 | 191 | 1 | 115 | 2.63e-20 | 89.4 |
Msa1351990 | AT5G65790.1 | 34.752 | 141 | 86 | 3 | 91 | 225 | 14 | 154 | 3.78e-20 | 91.3 |
Msa1351990 | AT2G47190.1 | 40.000 | 110 | 64 | 2 | 91 | 198 | 22 | 131 | 4.10e-20 | 89.4 |
Msa1351990 | AT3G08500.1 | 42.157 | 102 | 58 | 1 | 91 | 191 | 32 | 133 | 4.66e-20 | 90.5 |
Msa1351990 | AT1G25340.2 | 38.462 | 104 | 60 | 1 | 91 | 194 | 20 | 119 | 6.72e-20 | 89.0 |
Msa1351990 | AT1G66380.1 | 37.600 | 125 | 77 | 1 | 84 | 207 | 3 | 127 | 6.87e-20 | 85.5 |
Msa1351990 | AT1G25340.3 | 38.462 | 104 | 60 | 1 | 91 | 194 | 20 | 119 | 8.19e-20 | 89.4 |
Msa1351990 | AT4G01680.2 | 37.705 | 122 | 63 | 2 | 85 | 193 | 8 | 129 | 8.38e-20 | 89.7 |
Msa1351990 | AT1G25340.1 | 38.095 | 105 | 64 | 1 | 91 | 194 | 20 | 124 | 9.86e-20 | 88.6 |
Msa1351990 | AT3G28910.1 | 40.196 | 102 | 60 | 1 | 91 | 191 | 14 | 115 | 1.03e-19 | 89.4 |
Msa1351990 | AT2G16720.1 | 37.069 | 116 | 65 | 3 | 83 | 191 | 1 | 115 | 1.03e-19 | 88.2 |
Msa1351990 | AT3G61250.1 | 37.594 | 133 | 76 | 3 | 82 | 212 | 9 | 136 | 1.18e-19 | 88.6 |
Msa1351990 | AT4G34990.1 | 37.391 | 115 | 66 | 2 | 83 | 191 | 1 | 115 | 1.23e-19 | 88.2 |
Msa1351990 | AT3G13540.1 | 30.247 | 162 | 103 | 2 | 91 | 242 | 25 | 186 | 1.35e-19 | 87.4 |
Msa1351990 | AT1G56650.1 | 31.176 | 170 | 109 | 3 | 84 | 252 | 3 | 165 | 1.51e-19 | 87.4 |
Msa1351990 | AT1G68320.1 | 39.623 | 106 | 61 | 2 | 91 | 194 | 21 | 125 | 1.72e-19 | 87.8 |
Msa1351990 | AT1G66230.1 | 33.939 | 165 | 100 | 5 | 82 | 242 | 9 | 168 | 2.03e-19 | 87.8 |
Msa1351990 | AT5G16600.1 | 37.594 | 133 | 76 | 3 | 82 | 212 | 9 | 136 | 2.19e-19 | 88.2 |
Msa1351990 | AT5G49620.1 | 36.232 | 138 | 82 | 3 | 63 | 198 | 4 | 137 | 3.01e-19 | 87.4 |
Msa1351990 | AT1G74650.1 | 38.235 | 102 | 62 | 1 | 91 | 191 | 14 | 115 | 3.89e-19 | 87.8 |
Msa1351990 | AT2G02820.1 | 33.884 | 121 | 80 | 0 | 94 | 214 | 33 | 153 | 5.38e-19 | 88.6 |
Msa1351990 | AT2G02820.3 | 33.884 | 121 | 80 | 0 | 94 | 214 | 33 | 153 | 5.87e-19 | 87.0 |
Msa1351990 | AT2G02820.2 | 33.884 | 121 | 80 | 0 | 94 | 214 | 33 | 153 | 6.19e-19 | 88.6 |
Msa1351990 | AT1G08810.1 | 34.014 | 147 | 94 | 2 | 91 | 234 | 14 | 160 | 7.91e-19 | 85.9 |
Msa1351990 | AT3G12820.2 | 51.471 | 68 | 33 | 0 | 124 | 191 | 2 | 69 | 8.57e-19 | 84.0 |
Msa1351990 | AT2G36890.1 | 42.308 | 104 | 56 | 3 | 91 | 191 | 14 | 116 | 9.27e-19 | 85.9 |
Msa1351990 | AT4G13480.1 | 40.187 | 107 | 61 | 2 | 87 | 191 | 4 | 109 | 9.96e-19 | 85.1 |
Msa1351990 | AT2G36890.2 | 42.308 | 104 | 56 | 3 | 91 | 191 | 55 | 157 | 1.00e-18 | 86.7 |
Msa1351990 | AT3G24310.1 | 41.748 | 103 | 57 | 2 | 91 | 191 | 20 | 121 | 1.03e-18 | 85.5 |
Msa1351990 | AT3G53200.2 | 48.611 | 72 | 37 | 0 | 124 | 195 | 12 | 83 | 1.41e-18 | 83.6 |
Msa1351990 | AT1G48000.1 | 43.158 | 95 | 53 | 1 | 91 | 184 | 34 | 128 | 1.68e-18 | 84.3 |
Msa1351990 | AT5G35550.2 | 46.154 | 78 | 40 | 1 | 116 | 191 | 43 | 120 | 2.21e-18 | 84.3 |
Msa1351990 | AT5G40350.1 | 41.053 | 95 | 55 | 1 | 91 | 184 | 19 | 113 | 3.29e-18 | 82.8 |
Msa1351990 | AT4G12350.1 | 38.679 | 106 | 62 | 2 | 88 | 191 | 11 | 115 | 3.62e-18 | 84.3 |
Msa1351990 | AT3G27810.1 | 41.053 | 95 | 55 | 1 | 91 | 184 | 22 | 116 | 6.08e-18 | 82.4 |
Msa1351990 | AT3G01530.1 | 40.196 | 102 | 58 | 2 | 91 | 190 | 27 | 127 | 1.02e-17 | 81.3 |
Msa1351990 | AT4G22680.1 | 40.777 | 103 | 58 | 2 | 91 | 191 | 14 | 115 | 1.15e-17 | 82.4 |
Msa1351990 | AT2G47460.1 | 35.556 | 135 | 77 | 3 | 91 | 224 | 14 | 139 | 1.26e-17 | 83.6 |
Msa1351990 | AT5G26660.2 | 35.537 | 121 | 74 | 1 | 124 | 240 | 17 | 137 | 1.43e-17 | 82.8 |
Msa1351990 | AT1G14350.2 | 34.951 | 103 | 67 | 0 | 94 | 196 | 28 | 130 | 1.44e-17 | 84.0 |
Msa1351990 | AT1G14350.1 | 34.951 | 103 | 67 | 0 | 94 | 196 | 28 | 130 | 1.44e-17 | 84.0 |
Msa1351990 | AT3G06490.1 | 39.091 | 110 | 65 | 2 | 91 | 198 | 21 | 130 | 1.45e-17 | 83.2 |
Msa1351990 | AT4G37780.1 | 37.864 | 103 | 62 | 2 | 91 | 191 | 14 | 116 | 2.12e-17 | 82.4 |
Msa1351990 | AT5G49330.1 | 37.864 | 103 | 61 | 2 | 91 | 191 | 14 | 115 | 3.69e-17 | 82.0 |
Msa1351990 | AT5G59780.2 | 45.833 | 72 | 39 | 0 | 124 | 195 | 23 | 94 | 4.00e-17 | 79.7 |
Msa1351990 | AT2G37630.1 | 33.571 | 140 | 83 | 2 | 91 | 220 | 4 | 143 | 5.82e-17 | 81.6 |
Msa1351990 | AT3G46130.3 | 43.210 | 81 | 44 | 1 | 117 | 195 | 4 | 84 | 6.45e-17 | 79.3 |
Msa1351990 | AT1G66390.1 | 40.000 | 110 | 65 | 1 | 84 | 192 | 3 | 112 | 6.57e-17 | 79.7 |
Msa1351990 | AT3G46130.4 | 45.833 | 72 | 39 | 0 | 124 | 195 | 23 | 94 | 8.06e-17 | 79.3 |
Msa1351990 | AT3G62610.1 | 35.043 | 117 | 71 | 2 | 76 | 191 | 3 | 115 | 1.62e-16 | 80.1 |
Msa1351990 | AT3G18100.1 | 38.298 | 94 | 58 | 0 | 91 | 184 | 546 | 639 | 2.81e-16 | 80.9 |
Msa1351990 | AT3G18100.1 | 33.684 | 95 | 61 | 2 | 91 | 184 | 495 | 588 | 7.25e-11 | 64.3 |
Msa1351990 | AT3G18100.3 | 38.298 | 94 | 58 | 0 | 91 | 184 | 498 | 591 | 3.25e-16 | 80.9 |
Msa1351990 | AT3G18100.3 | 33.684 | 95 | 61 | 2 | 91 | 184 | 447 | 540 | 8.71e-11 | 63.9 |
Msa1351990 | AT3G18100.4 | 38.298 | 94 | 58 | 0 | 91 | 184 | 385 | 478 | 4.54e-16 | 80.1 |
Msa1351990 | AT3G18100.2 | 38.298 | 94 | 58 | 0 | 91 | 184 | 333 | 426 | 5.24e-16 | 79.7 |
Msa1351990 | AT5G49620.2 | 32.895 | 152 | 82 | 4 | 63 | 198 | 4 | 151 | 7.46e-16 | 78.2 |
Msa1351990 | AT5G40350.2 | 47.541 | 61 | 32 | 0 | 124 | 184 | 8 | 68 | 1.36e-15 | 74.3 |
Msa1351990 | AT3G27810.2 | 47.541 | 61 | 32 | 0 | 124 | 184 | 7 | 67 | 2.88e-15 | 73.6 |
Msa1351990 | AT1G66380.3 | 42.857 | 84 | 48 | 0 | 124 | 207 | 11 | 94 | 3.25e-15 | 71.2 |
Msa1351990 | AT5G62320.1 | 38.182 | 110 | 58 | 3 | 91 | 191 | 15 | 123 | 3.99e-15 | 74.7 |
Msa1351990 | AT3G47600.2 | 45.588 | 68 | 37 | 0 | 124 | 191 | 42 | 109 | 8.72e-15 | 75.1 |
Msa1351990 | AT1G71030.2 | 41.538 | 65 | 38 | 0 | 127 | 191 | 5 | 69 | 1.29e-13 | 68.9 |
Msa1351990 | AT1G71030.1 | 41.538 | 65 | 38 | 0 | 127 | 191 | 19 | 83 | 1.74e-13 | 68.9 |
Msa1351990 | AT5G14750.4 | 41.379 | 58 | 34 | 0 | 134 | 191 | 1 | 58 | 6.07e-13 | 66.2 |
Msa1351990 | AT5G14750.2 | 41.379 | 58 | 34 | 0 | 134 | 191 | 1 | 58 | 6.07e-13 | 66.2 |
Msa1351990 | AT3G23250.2 | 31.852 | 135 | 85 | 2 | 134 | 268 | 1 | 128 | 2.68e-12 | 66.2 |
Msa1351990 | AT1G22640.3 | 29.070 | 172 | 95 | 4 | 134 | 278 | 1 | 172 | 3.71e-12 | 65.1 |
Msa1351990 | AT1G09770.1 | 40.000 | 85 | 50 | 1 | 92 | 176 | 8 | 91 | 2.17e-11 | 65.9 |
Find 89 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTACAGTTTGTTCCATAAA+AGG | 0.190696 | tig0012398:-1449 | Msa1351990:three_prime_UTR |
CTGAATATGGTCCTCAAAAT+TGG | 0.247103 | tig0012398:-2927 | Msa1351990:CDS |
AGGTCCAATATCTCAATTTC+TGG | 0.252170 | tig0012398:-1658 | Msa1351990:CDS |
TTCACCAGAAATTGAGATAT+TGG | 0.257304 | tig0012398:+1654 | None:intergenic |
ATTGTATAAACTCCTGGTTT+TGG | 0.307076 | tig0012398:-1297 | Msa1351990:three_prime_UTR |
AAGGAGCTTGTTGCTGAATA+TGG | 0.317262 | tig0012398:-2940 | Msa1351990:CDS |
CTCTTCTTCTTCCTCAGAAA+AGG | 0.328360 | tig0012398:+2508 | None:intergenic |
TTGTTATGCTGTGGTACTTT+TGG | 0.354798 | tig0012398:-1238 | Msa1351990:three_prime_UTR |
TTAAGTTTAGCATCTTCTAT+TGG | 0.361231 | tig0012398:+2961 | None:intergenic |
GAAAGACTTTCAACAACAAC+AGG | 0.361584 | tig0012398:+2332 | None:intergenic |
ACTATCTCAAGCACCATTGA+TGG | 0.370339 | tig0012398:-2263 | Msa1351990:CDS |
TCAAGGCTATGGATCACTAA+TGG | 0.371833 | tig0012398:-2147 | Msa1351990:CDS |
AGGAGCTATACAAAGCTAAA+TGG | 0.376612 | tig0012398:-1572 | Msa1351990:exon |
AAAGCACCCATCTTCTACTT+TGG | 0.377594 | tig0012398:+3095 | None:intergenic |
AGGAGTGAGTGAGAGATTAG+TGG | 0.388076 | tig0012398:+2226 | None:intergenic |
AATTGAGATATTGGACCTAT+TGG | 0.389765 | tig0012398:+1663 | None:intergenic |
ATAAAATGTATGGTAACAAA+TGG | 0.396082 | tig0012398:-2469 | Msa1351990:CDS |
TTAGCTGCTCATAAAATGTA+TGG | 0.406757 | tig0012398:-2479 | Msa1351990:CDS |
ACAAGATAAGTTGAAGGAAT+AGG | 0.408227 | tig0012398:+3189 | None:intergenic |
TCCTTTGACAAACCCTGAAA+AGG | 0.411626 | tig0012398:-3151 | Msa1351990:CDS |
AGCTTTGTTCTAGAGGTCAT+TGG | 0.416349 | tig0012398:-2987 | Msa1351990:CDS |
GTTTGTCAAAGGAAGAGCTT+TGG | 0.416396 | tig0012398:+3161 | None:intergenic |
AATAGAAGATGCTAAACTTA+AGG | 0.419512 | tig0012398:-2959 | Msa1351990:CDS |
AGCTCTGTTTCTGTGAAAGT+TGG | 0.422370 | tig0012398:-3018 | Msa1351990:CDS |
TATTCCTTCAACTTATCTTG+TGG | 0.429455 | tig0012398:-3187 | Msa1351990:CDS |
AACAGTGTACTGTGTATAGA+AGG | 0.441649 | tig0012398:-2361 | Msa1351990:CDS |
CCATCCAAGTCATAAAACTT+TGG | 0.446284 | tig0012398:+1197 | None:intergenic |
CAAGGCTATGGATCACTAAT+GGG | 0.446395 | tig0012398:-2146 | Msa1351990:intron |
TTGATTGCAGAACATCTTGA+AGG | 0.454431 | tig0012398:-2901 | Msa1351990:CDS |
CAAAGCTAAATGGTTGATAC+AGG | 0.458360 | tig0012398:-1562 | Msa1351990:exon |
TTTAAGTCCAAAGTAGAAGA+TGG | 0.458745 | tig0012398:-3102 | Msa1351990:CDS |
GTTGAAGGAATAGGAGCTAA+AGG | 0.461111 | tig0012398:+3198 | None:intergenic |
AGTTGAGACATTTCCATCAA+TGG | 0.463655 | tig0012398:+2250 | None:intergenic |
ACTTTGGACTTAAACATTGA+GGG | 0.468793 | tig0012398:+3111 | None:intergenic |
TTCTCATATAGCAGAATACT+AGG | 0.469714 | tig0012398:-1269 | Msa1351990:three_prime_UTR |
ATAATAATTGTATAAACTCC+TGG | 0.469951 | tig0012398:-1303 | Msa1351990:three_prime_UTR |
ATAATGCAGTGAAGAATCAT+TGG | 0.470220 | tig0012398:-2412 | Msa1351990:CDS |
GAGAAAGTGTGGTGGCAACT+AGG | 0.473551 | tig0012398:-1825 | Msa1351990:CDS |
AGAAAGTGTGGTGGCAACTA+GGG | 0.475189 | tig0012398:-1824 | Msa1351990:CDS |
GAACATCTTGAAGGAAGATC+AGG | 0.475989 | tig0012398:-2892 | Msa1351990:intron |
ATACAGGAAGATCATGGGTT+AGG | 0.478477 | tig0012398:-1546 | Msa1351990:three_prime_UTR |
GATGGGTGCTTTGAGGTTCA+AGG | 0.478786 | tig0012398:-3084 | Msa1351990:CDS |
TACTTTGGACTTAAACATTG+AGG | 0.483288 | tig0012398:+3110 | None:intergenic |
CATTACCAAGTTTCAAAGAC+AGG | 0.490809 | tig0012398:+3055 | None:intergenic |
CCTTTGACAAACCCTGAAAA+GGG | 0.491757 | tig0012398:-3150 | Msa1351990:CDS |
CTGAGTCAGTTACCACCAAT+AGG | 0.493276 | tig0012398:-1678 | Msa1351990:CDS |
TACTCCAAGCTTTGTTCTAG+AGG | 0.507196 | tig0012398:-2994 | Msa1351990:CDS |
TAAAATGTATGGTAACAAAT+GGG | 0.508678 | tig0012398:-2468 | Msa1351990:CDS |
GTCGAGAGTCATCAAGGCTA+TGG | 0.512571 | tig0012398:-2158 | Msa1351990:CDS |
ACTCCAAGAAAATCAATGAA+TGG | 0.522689 | tig0012398:+1595 | None:intergenic |
TGAGATATTGGACCTATTGG+TGG | 0.526375 | tig0012398:+1666 | None:intergenic |
GAATCCACAAGATAAGTTGA+AGG | 0.528997 | tig0012398:+3183 | None:intergenic |
GCAAGGGAACCGTTTGTGTT+GGG | 0.529275 | tig0012398:-1504 | Msa1351990:three_prime_UTR |
AGTAGAAGATGGGTGCTTTG+AGG | 0.530721 | tig0012398:-3091 | Msa1351990:CDS |
TGAGGACTTAGTTTAGCTGA+AGG | 0.532322 | tig0012398:+2206 | None:intergenic |
GAATCATTGGCATGTGATCA+TGG | 0.539113 | tig0012398:-2399 | Msa1351990:CDS |
TGTTGTTGAAAGTCTTTCAA+AGG | 0.540837 | tig0012398:-2327 | Msa1351990:CDS |
TCTCATATAGCAGAATACTA+GGG | 0.547555 | tig0012398:-1268 | Msa1351990:three_prime_UTR |
TGCAAGGGAACCGTTTGTGT+TGG | 0.549674 | tig0012398:-1505 | Msa1351990:three_prime_UTR |
TGGTTGATACAGGAAGATCA+TGG | 0.550140 | tig0012398:-1552 | Msa1351990:three_prime_UTR |
TGATCATGGCTAGAAGACAT+AGG | 0.551949 | tig0012398:-2385 | Msa1351990:CDS |
ATGACCTCTAGAACAAAGCT+TGG | 0.553743 | tig0012398:+2990 | None:intergenic |
TAGCCTTGATGACTCTCGAC+TGG | 0.560007 | tig0012398:+2161 | None:intergenic |
GATCATGGGTTAGGAAAGTG+AGG | 0.563056 | tig0012398:-1537 | Msa1351990:three_prime_UTR |
ACTGCATTATCTGTCCTCCC+TGG | 0.564600 | tig0012398:+2425 | None:intergenic |
GATCATGGCTAGAAGACATA+GGG | 0.580957 | tig0012398:-2384 | Msa1351990:CDS |
GGGCCTTGTTTGTTATGCTG+TGG | 0.583138 | tig0012398:-1247 | Msa1351990:three_prime_UTR |
AAAGCTAATAGATGTGGTGG+TGG | 0.583743 | tig0012398:-1743 | Msa1351990:CDS |
GTTCCAGTCGAGAGTCATCA+AGG | 0.591505 | tig0012398:-2164 | Msa1351990:CDS |
TCTGGTGAAAGTGAAAATGT+TGG | 0.594833 | tig0012398:-1640 | Msa1351990:CDS |
TTAAGTCCAAAGTAGAAGAT+GGG | 0.595363 | tig0012398:-3101 | Msa1351990:CDS |
AGCTTGTAAGAAGAATGAAC+AGG | 0.595462 | tig0012398:-1776 | Msa1351990:CDS |
GCTAAAGCTAATAGATGTGG+TGG | 0.598165 | tig0012398:-1746 | Msa1351990:CDS |
TATGAAAGTGATGATGACTT+AGG | 0.598889 | tig0012398:-1350 | Msa1351990:three_prime_UTR |
TATGGAACAAACTGTACACA+AGG | 0.603512 | tig0012398:+1454 | None:intergenic |
ACTAGTTTATCAAACAGTTG+AGG | 0.605771 | tig0012398:+2188 | None:intergenic |
AAAGCTAAAGCTAATAGATG+TGG | 0.612393 | tig0012398:-1749 | Msa1351990:CDS |
ATGAGAAACAGTCCAAAACC+AGG | 0.613282 | tig0012398:+1285 | None:intergenic |
GGTTGATACAGGAAGATCAT+GGG | 0.615733 | tig0012398:-1551 | Msa1351990:three_prime_UTR |
GTGAGGGTAGTCAGATGCAA+GGG | 0.623599 | tig0012398:-1520 | Msa1351990:three_prime_UTR |
AGTGAGGGTAGTCAGATGCA+AGG | 0.624309 | tig0012398:-1521 | Msa1351990:three_prime_UTR |
ATCATGGGTTAGGAAAGTGA+GGG | 0.631123 | tig0012398:-1536 | Msa1351990:three_prime_UTR |
ACTTCACAAAAGTTCAACAA+TGG | 0.637959 | tig0012398:-3243 | Msa1351990:CDS |
CTCATATAGCAGAATACTAG+GGG | 0.639695 | tig0012398:-1267 | Msa1351990:three_prime_UTR |
AGACAAATCTAGAGAAAGTG+TGG | 0.652450 | tig0012398:-1836 | Msa1351990:CDS |
GTACCACAGCATAACAAACA+AGG | 0.673323 | tig0012398:+1244 | None:intergenic |
TTGTAAGAAGAATGAACAGG+TGG | 0.680203 | tig0012398:-1773 | Msa1351990:CDS |
ATGGAACAAACTGTACACAA+GGG | 0.692043 | tig0012398:+1455 | None:intergenic |
CAAATCTAGAGAAAGTGTGG+TGG | 0.706572 | tig0012398:-1833 | Msa1351990:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTAATATTTATAAATT+GGG | - | tig0012398:1763-1782 | Msa1351990:CDS | 0.0% |
!!! | TTTTTTAATATTTATAAATT+GGG | - | tig0012398:1763-1782 | Msa1351990:CDS | 0.0% |
!!! | TTAATATTTTCTTAAAAATG+GGG | + | tig0012398:1560-1579 | None:intergenic | 10.0% |
!!! | CTTTAATATTTTCTTAAAAA+TGG | + | tig0012398:1562-1581 | None:intergenic | 10.0% |
!!! | TTAATATTTTCTTAAAAATG+GGG | + | tig0012398:1560-1579 | None:intergenic | 10.0% |
!!! | CTTTAATATTTTCTTAAAAA+TGG | + | tig0012398:1562-1581 | None:intergenic | 10.0% |
!! | AATATATTAAAATACATGCA+AGG | + | tig0012398:1805-1824 | None:intergenic | 15.0% |
!! | ATATTTAATAATCTCTCATT+AGG | - | tig0012398:2296-2315 | Msa1351990:CDS | 15.0% |
!!! | ACTATGTTTTATACTATTAT+AGG | + | tig0012398:2322-2341 | None:intergenic | 15.0% |
!! | TGTTATGTAACAATTAAATT+TGG | + | tig0012398:2529-2548 | None:intergenic | 15.0% |
!! | AATGAATTGAACAAAAAAAT+AGG | - | tig0012398:3007-3026 | Msa1351990:CDS | 15.0% |
!! | AATATATTAAAATACATGCA+AGG | + | tig0012398:1805-1824 | None:intergenic | 15.0% |
!! | ATATTTAATAATCTCTCATT+AGG | - | tig0012398:2296-2315 | Msa1351990:CDS | 15.0% |
!!! | ACTATGTTTTATACTATTAT+AGG | + | tig0012398:2322-2341 | None:intergenic | 15.0% |
!! | TGTTATGTAACAATTAAATT+TGG | + | tig0012398:2529-2548 | None:intergenic | 15.0% |
!! | AATGAATTGAACAAAAAAAT+AGG | - | tig0012398:3007-3026 | Msa1351990:CDS | 15.0% |
!!! | TTGTTTTCAATTTTAATTGC+AGG | - | tig0012398:1826-1845 | Msa1351990:CDS | 20.0% |
!! | ATAAAATGTATGGTAACAAA+TGG | - | tig0012398:1944-1963 | Msa1351990:intron | 20.0% |
!! | TAAAATGTATGGTAACAAAT+GGG | - | tig0012398:1945-1964 | Msa1351990:intron | 20.0% |
!!! | TAAAACATAGTTTTAAGTTG+CGG | - | tig0012398:2331-2350 | Msa1351990:CDS | 20.0% |
!! | CACTACAAATATTTATATTG+CGG | - | tig0012398:2363-2382 | Msa1351990:CDS | 20.0% |
!! | AATATAGTTTAGCAAATTTC+CGG | + | tig0012398:2484-2503 | None:intergenic | 20.0% |
!!! | TTTTTACTTTTTGCCTTTTA+TGG | + | tig0012398:2980-2999 | None:intergenic | 20.0% |
!! | ATAATAATTGTATAAACTCC+TGG | - | tig0012398:3110-3129 | Msa1351990:CDS | 20.0% |
!!! | TTGTTTTCAATTTTAATTGC+AGG | - | tig0012398:1826-1845 | Msa1351990:CDS | 20.0% |
!! | ATAAAATGTATGGTAACAAA+TGG | - | tig0012398:1944-1963 | Msa1351990:intron | 20.0% |
!! | TAAAATGTATGGTAACAAAT+GGG | - | tig0012398:1945-1964 | Msa1351990:intron | 20.0% |
!!! | TAAAACATAGTTTTAAGTTG+CGG | - | tig0012398:2331-2350 | Msa1351990:CDS | 20.0% |
!! | CACTACAAATATTTATATTG+CGG | - | tig0012398:2363-2382 | Msa1351990:CDS | 20.0% |
!! | AATATAGTTTAGCAAATTTC+CGG | + | tig0012398:2484-2503 | None:intergenic | 20.0% |
!!! | TTTTTACTTTTTGCCTTTTA+TGG | + | tig0012398:2980-2999 | None:intergenic | 20.0% |
!! | ATAATAATTGTATAAACTCC+TGG | - | tig0012398:3110-3129 | Msa1351990:CDS | 20.0% |
! | TTAAGTTTAGCATCTTCTAT+TGG | + | tig0012398:1455-1474 | None:intergenic | 25.0% |
! | AATAGAAGATGCTAAACTTA+AGG | - | tig0012398:1454-1473 | Msa1351990:three_prime_UTR | 25.0% |
!!! | AGGTTTTTTTGTTGATTCTT+GGG | + | tig0012398:1888-1907 | None:intergenic | 25.0% |
!!! | AAGGTTTTTTTGTTGATTCT+TGG | + | tig0012398:1889-1908 | None:intergenic | 25.0% |
! | CGCAATATAAATATTTGTAG+TGG | + | tig0012398:2365-2384 | None:intergenic | 25.0% |
! | TTTATATTGCGGTAAAATGT+AGG | - | tig0012398:2374-2393 | Msa1351990:CDS | 25.0% |
! | GTAACAATTAAATTTGGACA+TGG | + | tig0012398:2523-2542 | None:intergenic | 25.0% |
!!! | GTGAATTTTGACAAGTATTT+TGG | - | tig0012398:2614-2633 | Msa1351990:intron | 25.0% |
! | AGAGTTTGAATCTGAAAAAT+TGG | + | tig0012398:2702-2721 | None:intergenic | 25.0% |
! | TTAAGTTTAGCATCTTCTAT+TGG | + | tig0012398:1455-1474 | None:intergenic | 25.0% |
! | AATAGAAGATGCTAAACTTA+AGG | - | tig0012398:1454-1473 | Msa1351990:three_prime_UTR | 25.0% |
!!! | AGGTTTTTTTGTTGATTCTT+GGG | + | tig0012398:1888-1907 | None:intergenic | 25.0% |
!!! | AAGGTTTTTTTGTTGATTCT+TGG | + | tig0012398:1889-1908 | None:intergenic | 25.0% |
! | CGCAATATAAATATTTGTAG+TGG | + | tig0012398:2365-2384 | None:intergenic | 25.0% |
! | TTTATATTGCGGTAAAATGT+AGG | - | tig0012398:2374-2393 | Msa1351990:CDS | 25.0% |
! | GTAACAATTAAATTTGGACA+TGG | + | tig0012398:2523-2542 | None:intergenic | 25.0% |
!!! | GTGAATTTTGACAAGTATTT+TGG | - | tig0012398:2614-2633 | Msa1351990:intron | 25.0% |
! | AGAGTTTGAATCTGAAAAAT+TGG | + | tig0012398:2702-2721 | None:intergenic | 25.0% |
ACTTCACAAAAGTTCAACAA+TGG | - | tig0012398:1170-1189 | Msa1351990:three_prime_UTR | 30.0% | |
! | ACAAGATAAGTTGAAGGAAT+AGG | + | tig0012398:1227-1246 | None:intergenic | 30.0% |
TATTCCTTCAACTTATCTTG+TGG | - | tig0012398:1226-1245 | Msa1351990:three_prime_UTR | 30.0% | |
ACTTTGGACTTAAACATTGA+GGG | + | tig0012398:1305-1324 | None:intergenic | 30.0% | |
TACTTTGGACTTAAACATTG+AGG | + | tig0012398:1306-1325 | None:intergenic | 30.0% | |
TTTAAGTCCAAAGTAGAAGA+TGG | - | tig0012398:1311-1330 | Msa1351990:three_prime_UTR | 30.0% | |
TTAAGTCCAAAGTAGAAGAT+GGG | - | tig0012398:1312-1331 | Msa1351990:three_prime_UTR | 30.0% | |
!! | AAAAACCTGTCTTTGAAACT+TGG | - | tig0012398:1353-1372 | Msa1351990:three_prime_UTR | 30.0% |
! | ATTTTCTTAAAAATGGGGTG+AGG | + | tig0012398:1555-1574 | None:intergenic | 30.0% |
! | CAACAAAAAAACCTTTTCTG+AGG | - | tig0012398:1894-1913 | Msa1351990:intron | 30.0% |
TTAGCTGCTCATAAAATGTA+TGG | - | tig0012398:1934-1953 | Msa1351990:intron | 30.0% | |
!! | ATAATTGCTAGACTTTTTCC+AGG | - | tig0012398:1970-1989 | Msa1351990:intron | 30.0% |
!! | TAATTGCTAGACTTTTTCCA+GGG | - | tig0012398:1971-1990 | Msa1351990:intron | 30.0% |
ATAATGCAGTGAAGAATCAT+TGG | - | tig0012398:2001-2020 | Msa1351990:intron | 30.0% | |
TGTTGTTGAAAGTCTTTCAA+AGG | - | tig0012398:2086-2105 | Msa1351990:intron | 30.0% | |
! | ACTAGTTTATCAAACAGTTG+AGG | + | tig0012398:2228-2247 | None:intergenic | 30.0% |
AAAGCTAAAGCTAATAGATG+TGG | - | tig0012398:2664-2683 | Msa1351990:intron | 30.0% | |
TTGAATCTGAAAAATTGGAC+TGG | + | tig0012398:2697-2716 | None:intergenic | 30.0% | |
AATTGAGATATTGGACCTAT+TGG | + | tig0012398:2753-2772 | None:intergenic | 30.0% | |
TTCACCAGAAATTGAGATAT+TGG | + | tig0012398:2762-2781 | None:intergenic | 30.0% | |
!!! | CTACCATTCATTGATTTTCT+TGG | - | tig0012398:2815-2834 | Msa1351990:intron | 30.0% |
ACTCCAAGAAAATCAATGAA+TGG | + | tig0012398:2821-2840 | None:intergenic | 30.0% | |
!!! | TTCATTGATTTTCTTGGAGT+AGG | - | tig0012398:2821-2840 | Msa1351990:intron | 30.0% |
! | TGTACAGTTTGTTCCATAAA+AGG | - | tig0012398:2964-2983 | Msa1351990:CDS | 30.0% |
! | TATGAAAGTGATGATGACTT+AGG | - | tig0012398:3063-3082 | Msa1351990:CDS | 30.0% |
! | ATTGTATAAACTCCTGGTTT+TGG | - | tig0012398:3116-3135 | Msa1351990:CDS | 30.0% |
TTCTCATATAGCAGAATACT+AGG | - | tig0012398:3144-3163 | Msa1351990:CDS | 30.0% | |
TCTCATATAGCAGAATACTA+GGG | - | tig0012398:3145-3164 | Msa1351990:CDS | 30.0% | |
ACTTCACAAAAGTTCAACAA+TGG | - | tig0012398:1170-1189 | Msa1351990:three_prime_UTR | 30.0% | |
! | ACAAGATAAGTTGAAGGAAT+AGG | + | tig0012398:1227-1246 | None:intergenic | 30.0% |
TATTCCTTCAACTTATCTTG+TGG | - | tig0012398:1226-1245 | Msa1351990:three_prime_UTR | 30.0% | |
ACTTTGGACTTAAACATTGA+GGG | + | tig0012398:1305-1324 | None:intergenic | 30.0% | |
TACTTTGGACTTAAACATTG+AGG | + | tig0012398:1306-1325 | None:intergenic | 30.0% | |
TTTAAGTCCAAAGTAGAAGA+TGG | - | tig0012398:1311-1330 | Msa1351990:three_prime_UTR | 30.0% | |
TTAAGTCCAAAGTAGAAGAT+GGG | - | tig0012398:1312-1331 | Msa1351990:three_prime_UTR | 30.0% | |
!! | AAAAACCTGTCTTTGAAACT+TGG | - | tig0012398:1353-1372 | Msa1351990:three_prime_UTR | 30.0% |
! | ATTTTCTTAAAAATGGGGTG+AGG | + | tig0012398:1555-1574 | None:intergenic | 30.0% |
! | CAACAAAAAAACCTTTTCTG+AGG | - | tig0012398:1894-1913 | Msa1351990:intron | 30.0% |
TTAGCTGCTCATAAAATGTA+TGG | - | tig0012398:1934-1953 | Msa1351990:intron | 30.0% | |
!! | ATAATTGCTAGACTTTTTCC+AGG | - | tig0012398:1970-1989 | Msa1351990:intron | 30.0% |
!! | TAATTGCTAGACTTTTTCCA+GGG | - | tig0012398:1971-1990 | Msa1351990:intron | 30.0% |
ATAATGCAGTGAAGAATCAT+TGG | - | tig0012398:2001-2020 | Msa1351990:intron | 30.0% | |
TGTTGTTGAAAGTCTTTCAA+AGG | - | tig0012398:2086-2105 | Msa1351990:intron | 30.0% | |
! | ACTAGTTTATCAAACAGTTG+AGG | + | tig0012398:2228-2247 | None:intergenic | 30.0% |
AAAGCTAAAGCTAATAGATG+TGG | - | tig0012398:2664-2683 | Msa1351990:intron | 30.0% | |
TTGAATCTGAAAAATTGGAC+TGG | + | tig0012398:2697-2716 | None:intergenic | 30.0% | |
AATTGAGATATTGGACCTAT+TGG | + | tig0012398:2753-2772 | None:intergenic | 30.0% | |
TTCACCAGAAATTGAGATAT+TGG | + | tig0012398:2762-2781 | None:intergenic | 30.0% | |
!!! | CTACCATTCATTGATTTTCT+TGG | - | tig0012398:2815-2834 | Msa1351990:intron | 30.0% |
ACTCCAAGAAAATCAATGAA+TGG | + | tig0012398:2821-2840 | None:intergenic | 30.0% | |
!!! | TTCATTGATTTTCTTGGAGT+AGG | - | tig0012398:2821-2840 | Msa1351990:intron | 30.0% |
! | TGTACAGTTTGTTCCATAAA+AGG | - | tig0012398:2964-2983 | Msa1351990:CDS | 30.0% |
! | TATGAAAGTGATGATGACTT+AGG | - | tig0012398:3063-3082 | Msa1351990:CDS | 30.0% |
! | ATTGTATAAACTCCTGGTTT+TGG | - | tig0012398:3116-3135 | Msa1351990:CDS | 30.0% |
TTCTCATATAGCAGAATACT+AGG | - | tig0012398:3144-3163 | Msa1351990:CDS | 30.0% | |
TCTCATATAGCAGAATACTA+GGG | - | tig0012398:3145-3164 | Msa1351990:CDS | 30.0% | |
! | GAATCCACAAGATAAGTTGA+AGG | + | tig0012398:1233-1252 | None:intergenic | 35.0% |
! | AAATCTGAAGACCCTTTTCA+GGG | + | tig0012398:1277-1296 | None:intergenic | 35.0% |
! | AAAATCTGAAGACCCTTTTC+AGG | + | tig0012398:1278-1297 | None:intergenic | 35.0% |
CATTACCAAGTTTCAAAGAC+AGG | + | tig0012398:1361-1380 | None:intergenic | 35.0% | |
CTGAATATGGTCCTCAAAAT+TGG | - | tig0012398:1486-1505 | Msa1351990:three_prime_UTR | 35.0% | |
! | GCAATCAAGTTCCAATTTTG+AGG | + | tig0012398:1500-1519 | None:intergenic | 35.0% |
TTGATTGCAGAACATCTTGA+AGG | - | tig0012398:1512-1531 | Msa1351990:three_prime_UTR | 35.0% | |
!! | TTCTAGAGTAAGTGCATGTT+TGG | - | tig0012398:1598-1617 | Msa1351990:CDS | 35.0% |
GTAAGTGCATGTTTGGATTT+AGG | - | tig0012398:1605-1624 | Msa1351990:CDS | 35.0% | |
CAGGAAAAAGTTGTAGATTG+AGG | - | tig0012398:1845-1864 | Msa1351990:intron | 35.0% | |
GAAAAAGTTGTAGATTGAGG+TGG | - | tig0012398:1848-1867 | Msa1351990:intron | 35.0% | |
AACAGTGTACTGTGTATAGA+AGG | - | tig0012398:2052-2071 | Msa1351990:intron | 35.0% | |
GAAAGACTTTCAACAACAAC+AGG | + | tig0012398:2084-2103 | None:intergenic | 35.0% | |
AGTTGAGACATTTCCATCAA+TGG | + | tig0012398:2166-2185 | None:intergenic | 35.0% | |
! | AATTGTAAATGCGAAGGCAT+CGG | + | tig0012398:2408-2427 | None:intergenic | 35.0% |
CATCACAATTGTAAATGCGA+AGG | + | tig0012398:2414-2433 | None:intergenic | 35.0% | |
AGACAAATCTAGAGAAAGTG+TGG | - | tig0012398:2577-2596 | Msa1351990:intron | 35.0% | |
AGCTTGTAAGAAGAATGAAC+AGG | - | tig0012398:2637-2656 | Msa1351990:intron | 35.0% | |
TTGTAAGAAGAATGAACAGG+TGG | - | tig0012398:2640-2659 | Msa1351990:intron | 35.0% | |
AGGTCCAATATCTCAATTTC+TGG | - | tig0012398:2755-2774 | Msa1351990:intron | 35.0% | |
TCTGGTGAAAGTGAAAATGT+TGG | - | tig0012398:2773-2792 | Msa1351990:intron | 35.0% | |
AGGAGCTATACAAAGCTAAA+TGG | - | tig0012398:2841-2860 | Msa1351990:intron | 35.0% | |
! | CAAAGCTAAATGGTTGATAC+AGG | - | tig0012398:2851-2870 | Msa1351990:intron | 35.0% |
! | TCATTTTCACCCAACACAAA+CGG | + | tig0012398:2921-2940 | None:intergenic | 35.0% |
ATGGAACAAACTGTACACAA+GGG | + | tig0012398:2961-2980 | None:intergenic | 35.0% | |
TATGGAACAAACTGTACACA+AGG | + | tig0012398:2962-2981 | None:intergenic | 35.0% | |
CTCATATAGCAGAATACTAG+GGG | - | tig0012398:3146-3165 | Msa1351990:CDS | 35.0% | |
! | TTGTTATGCTGTGGTACTTT+TGG | - | tig0012398:3175-3194 | Msa1351990:CDS | 35.0% |
!! | GAAGCCAAAGTTTTATGACT+TGG | - | tig0012398:3212-3231 | Msa1351990:CDS | 35.0% |
CCATCCAAGTCATAAAACTT+TGG | + | tig0012398:3219-3238 | None:intergenic | 35.0% | |
!! | CCAAAGTTTTATGACTTGGA+TGG | - | tig0012398:3216-3235 | Msa1351990:CDS | 35.0% |
!! | AGTTTTATGACTTGGATGGA+TGG | - | tig0012398:3220-3239 | Msa1351990:CDS | 35.0% |
! | GAATCCACAAGATAAGTTGA+AGG | + | tig0012398:1233-1252 | None:intergenic | 35.0% |
! | AAATCTGAAGACCCTTTTCA+GGG | + | tig0012398:1277-1296 | None:intergenic | 35.0% |
! | AAAATCTGAAGACCCTTTTC+AGG | + | tig0012398:1278-1297 | None:intergenic | 35.0% |
CATTACCAAGTTTCAAAGAC+AGG | + | tig0012398:1361-1380 | None:intergenic | 35.0% | |
CTGAATATGGTCCTCAAAAT+TGG | - | tig0012398:1486-1505 | Msa1351990:three_prime_UTR | 35.0% | |
! | GCAATCAAGTTCCAATTTTG+AGG | + | tig0012398:1500-1519 | None:intergenic | 35.0% |
TTGATTGCAGAACATCTTGA+AGG | - | tig0012398:1512-1531 | Msa1351990:three_prime_UTR | 35.0% | |
!! | TTCTAGAGTAAGTGCATGTT+TGG | - | tig0012398:1598-1617 | Msa1351990:CDS | 35.0% |
GTAAGTGCATGTTTGGATTT+AGG | - | tig0012398:1605-1624 | Msa1351990:CDS | 35.0% | |
CAGGAAAAAGTTGTAGATTG+AGG | - | tig0012398:1845-1864 | Msa1351990:intron | 35.0% | |
GAAAAAGTTGTAGATTGAGG+TGG | - | tig0012398:1848-1867 | Msa1351990:intron | 35.0% | |
AACAGTGTACTGTGTATAGA+AGG | - | tig0012398:2052-2071 | Msa1351990:intron | 35.0% | |
GAAAGACTTTCAACAACAAC+AGG | + | tig0012398:2084-2103 | None:intergenic | 35.0% | |
AGTTGAGACATTTCCATCAA+TGG | + | tig0012398:2166-2185 | None:intergenic | 35.0% | |
! | AATTGTAAATGCGAAGGCAT+CGG | + | tig0012398:2408-2427 | None:intergenic | 35.0% |
CATCACAATTGTAAATGCGA+AGG | + | tig0012398:2414-2433 | None:intergenic | 35.0% | |
AGACAAATCTAGAGAAAGTG+TGG | - | tig0012398:2577-2596 | Msa1351990:intron | 35.0% | |
AGCTTGTAAGAAGAATGAAC+AGG | - | tig0012398:2637-2656 | Msa1351990:intron | 35.0% | |
TTGTAAGAAGAATGAACAGG+TGG | - | tig0012398:2640-2659 | Msa1351990:intron | 35.0% | |
AGGTCCAATATCTCAATTTC+TGG | - | tig0012398:2755-2774 | Msa1351990:intron | 35.0% | |
TCTGGTGAAAGTGAAAATGT+TGG | - | tig0012398:2773-2792 | Msa1351990:intron | 35.0% | |
AGGAGCTATACAAAGCTAAA+TGG | - | tig0012398:2841-2860 | Msa1351990:intron | 35.0% | |
! | CAAAGCTAAATGGTTGATAC+AGG | - | tig0012398:2851-2870 | Msa1351990:intron | 35.0% |
! | TCATTTTCACCCAACACAAA+CGG | + | tig0012398:2921-2940 | None:intergenic | 35.0% |
ATGGAACAAACTGTACACAA+GGG | + | tig0012398:2961-2980 | None:intergenic | 35.0% | |
TATGGAACAAACTGTACACA+AGG | + | tig0012398:2962-2981 | None:intergenic | 35.0% | |
CTCATATAGCAGAATACTAG+GGG | - | tig0012398:3146-3165 | Msa1351990:CDS | 35.0% | |
! | TTGTTATGCTGTGGTACTTT+TGG | - | tig0012398:3175-3194 | Msa1351990:CDS | 35.0% |
!! | GAAGCCAAAGTTTTATGACT+TGG | - | tig0012398:3212-3231 | Msa1351990:CDS | 35.0% |
CCATCCAAGTCATAAAACTT+TGG | + | tig0012398:3219-3238 | None:intergenic | 35.0% | |
!! | CCAAAGTTTTATGACTTGGA+TGG | - | tig0012398:3216-3235 | Msa1351990:CDS | 35.0% |
!! | AGTTTTATGACTTGGATGGA+TGG | - | tig0012398:3220-3239 | Msa1351990:CDS | 35.0% |
GTTGAAGGAATAGGAGCTAA+AGG | + | tig0012398:1218-1237 | None:intergenic | 40.0% | |
GTTTGTCAAAGGAAGAGCTT+TGG | + | tig0012398:1255-1274 | None:intergenic | 40.0% | |
TCCTTTGACAAACCCTGAAA+AGG | - | tig0012398:1262-1281 | Msa1351990:three_prime_UTR | 40.0% | |
CCTTTGACAAACCCTGAAAA+GGG | - | tig0012398:1263-1282 | Msa1351990:three_prime_UTR | 40.0% | |
! | AAAGCACCCATCTTCTACTT+TGG | + | tig0012398:1321-1340 | None:intergenic | 40.0% |
!! | AGCTCTGTTTCTGTGAAAGT+TGG | - | tig0012398:1395-1414 | Msa1351990:three_prime_UTR | 40.0% |
!! | TACTCCAAGCTTTGTTCTAG+AGG | - | tig0012398:1419-1438 | Msa1351990:three_prime_UTR | 40.0% |
!! | ATGACCTCTAGAACAAAGCT+TGG | + | tig0012398:1426-1445 | None:intergenic | 40.0% |
!! | AGCTTTGTTCTAGAGGTCAT+TGG | - | tig0012398:1426-1445 | Msa1351990:three_prime_UTR | 40.0% |
!! | AAGGAGCTTGTTGCTGAATA+TGG | - | tig0012398:1473-1492 | Msa1351990:three_prime_UTR | 40.0% |
GAACATCTTGAAGGAAGATC+AGG | - | tig0012398:1521-1540 | Msa1351990:three_prime_UTR | 40.0% | |
TCATCACTTTGTGACACAAC+AGG | + | tig0012398:1647-1666 | None:intergenic | 40.0% | |
CTCTTCTTCTTCCTCAGAAA+AGG | + | tig0012398:1908-1927 | None:intergenic | 40.0% | |
GAATCATTGGCATGTGATCA+TGG | - | tig0012398:2014-2033 | Msa1351990:intron | 40.0% | |
TGATCATGGCTAGAAGACAT+AGG | - | tig0012398:2028-2047 | Msa1351990:intron | 40.0% | |
GATCATGGCTAGAAGACATA+GGG | - | tig0012398:2029-2048 | Msa1351990:intron | 40.0% | |
ACTATCTCAAGCACCATTGA+TGG | - | tig0012398:2150-2169 | Msa1351990:CDS | 40.0% | |
TGAGGACTTAGTTTAGCTGA+AGG | + | tig0012398:2210-2229 | None:intergenic | 40.0% | |
TCAAGGCTATGGATCACTAA+TGG | - | tig0012398:2266-2285 | Msa1351990:CDS | 40.0% | |
CAAGGCTATGGATCACTAAT+GGG | - | tig0012398:2267-2286 | Msa1351990:CDS | 40.0% | |
TGCGGTAAAATGTAGGCAAA+TGG | - | tig0012398:2381-2400 | Msa1351990:CDS | 40.0% | |
GCGGTAAAATGTAGGCAAAT+GGG | - | tig0012398:2382-2401 | Msa1351990:CDS | 40.0% | |
! | GTATGTTTAGAATCACGACG+AGG | - | tig0012398:2454-2473 | Msa1351990:CDS | 40.0% |
! | CAAATCTAGAGAAAGTGTGG+TGG | - | tig0012398:2580-2599 | Msa1351990:intron | 40.0% |
GCTAAAGCTAATAGATGTGG+TGG | - | tig0012398:2667-2686 | Msa1351990:intron | 40.0% | |
AAAGCTAATAGATGTGGTGG+TGG | - | tig0012398:2670-2689 | Msa1351990:intron | 40.0% | |
TGAGATATTGGACCTATTGG+TGG | + | tig0012398:2750-2769 | None:intergenic | 40.0% | |
! | TGGTTGATACAGGAAGATCA+TGG | - | tig0012398:2861-2880 | Msa1351990:intron | 40.0% |
! | GGTTGATACAGGAAGATCAT+GGG | - | tig0012398:2862-2881 | Msa1351990:intron | 40.0% |
ATACAGGAAGATCATGGGTT+AGG | - | tig0012398:2867-2886 | Msa1351990:intron | 40.0% | |
!! | ATCATGGGTTAGGAAAGTGA+GGG | - | tig0012398:2877-2896 | Msa1351990:intron | 40.0% |
ATGAGAAACAGTCCAAAACC+AGG | + | tig0012398:3131-3150 | None:intergenic | 40.0% | |
GTACCACAGCATAACAAACA+AGG | + | tig0012398:3172-3191 | None:intergenic | 40.0% | |
GTTGAAGGAATAGGAGCTAA+AGG | + | tig0012398:1218-1237 | None:intergenic | 40.0% | |
GTTTGTCAAAGGAAGAGCTT+TGG | + | tig0012398:1255-1274 | None:intergenic | 40.0% | |
TCCTTTGACAAACCCTGAAA+AGG | - | tig0012398:1262-1281 | Msa1351990:three_prime_UTR | 40.0% | |
CCTTTGACAAACCCTGAAAA+GGG | - | tig0012398:1263-1282 | Msa1351990:three_prime_UTR | 40.0% | |
! | AAAGCACCCATCTTCTACTT+TGG | + | tig0012398:1321-1340 | None:intergenic | 40.0% |
!! | AGCTCTGTTTCTGTGAAAGT+TGG | - | tig0012398:1395-1414 | Msa1351990:three_prime_UTR | 40.0% |
!! | TACTCCAAGCTTTGTTCTAG+AGG | - | tig0012398:1419-1438 | Msa1351990:three_prime_UTR | 40.0% |
!! | ATGACCTCTAGAACAAAGCT+TGG | + | tig0012398:1426-1445 | None:intergenic | 40.0% |
!! | AGCTTTGTTCTAGAGGTCAT+TGG | - | tig0012398:1426-1445 | Msa1351990:three_prime_UTR | 40.0% |
!! | AAGGAGCTTGTTGCTGAATA+TGG | - | tig0012398:1473-1492 | Msa1351990:three_prime_UTR | 40.0% |
GAACATCTTGAAGGAAGATC+AGG | - | tig0012398:1521-1540 | Msa1351990:three_prime_UTR | 40.0% | |
TCATCACTTTGTGACACAAC+AGG | + | tig0012398:1647-1666 | None:intergenic | 40.0% | |
CTCTTCTTCTTCCTCAGAAA+AGG | + | tig0012398:1908-1927 | None:intergenic | 40.0% | |
GAATCATTGGCATGTGATCA+TGG | - | tig0012398:2014-2033 | Msa1351990:intron | 40.0% | |
TGATCATGGCTAGAAGACAT+AGG | - | tig0012398:2028-2047 | Msa1351990:intron | 40.0% | |
GATCATGGCTAGAAGACATA+GGG | - | tig0012398:2029-2048 | Msa1351990:intron | 40.0% | |
ACTATCTCAAGCACCATTGA+TGG | - | tig0012398:2150-2169 | Msa1351990:CDS | 40.0% | |
TGAGGACTTAGTTTAGCTGA+AGG | + | tig0012398:2210-2229 | None:intergenic | 40.0% | |
TCAAGGCTATGGATCACTAA+TGG | - | tig0012398:2266-2285 | Msa1351990:CDS | 40.0% | |
CAAGGCTATGGATCACTAAT+GGG | - | tig0012398:2267-2286 | Msa1351990:CDS | 40.0% | |
TGCGGTAAAATGTAGGCAAA+TGG | - | tig0012398:2381-2400 | Msa1351990:CDS | 40.0% | |
GCGGTAAAATGTAGGCAAAT+GGG | - | tig0012398:2382-2401 | Msa1351990:CDS | 40.0% | |
! | GTATGTTTAGAATCACGACG+AGG | - | tig0012398:2454-2473 | Msa1351990:CDS | 40.0% |
! | CAAATCTAGAGAAAGTGTGG+TGG | - | tig0012398:2580-2599 | Msa1351990:intron | 40.0% |
GCTAAAGCTAATAGATGTGG+TGG | - | tig0012398:2667-2686 | Msa1351990:intron | 40.0% | |
AAAGCTAATAGATGTGGTGG+TGG | - | tig0012398:2670-2689 | Msa1351990:intron | 40.0% | |
TGAGATATTGGACCTATTGG+TGG | + | tig0012398:2750-2769 | None:intergenic | 40.0% | |
! | TGGTTGATACAGGAAGATCA+TGG | - | tig0012398:2861-2880 | Msa1351990:intron | 40.0% |
! | GGTTGATACAGGAAGATCAT+GGG | - | tig0012398:2862-2881 | Msa1351990:intron | 40.0% |
ATACAGGAAGATCATGGGTT+AGG | - | tig0012398:2867-2886 | Msa1351990:intron | 40.0% | |
!! | ATCATGGGTTAGGAAAGTGA+GGG | - | tig0012398:2877-2896 | Msa1351990:intron | 40.0% |
ATGAGAAACAGTCCAAAACC+AGG | + | tig0012398:3131-3150 | None:intergenic | 40.0% | |
GTACCACAGCATAACAAACA+AGG | + | tig0012398:3172-3191 | None:intergenic | 40.0% | |
!! | CCCTTTTCAGGGTTTGTCAA+AGG | + | tig0012398:1266-1285 | None:intergenic | 45.0% |
AGTAGAAGATGGGTGCTTTG+AGG | - | tig0012398:1322-1341 | Msa1351990:three_prime_UTR | 45.0% | |
!! | TTGCTAGACTTTTTCCAGGG+AGG | - | tig0012398:1974-1993 | Msa1351990:intron | 45.0% |
AGGAGTGAGTGAGAGATTAG+TGG | + | tig0012398:2190-2209 | None:intergenic | 45.0% | |
! | AGAAAGTGTGGTGGCAACTA+GGG | - | tig0012398:2589-2608 | Msa1351990:intron | 45.0% |
CTGAGTCAGTTACCACCAAT+AGG | - | tig0012398:2735-2754 | Msa1351990:intron | 45.0% | |
!! | GATCATGGGTTAGGAAAGTG+AGG | - | tig0012398:2876-2895 | Msa1351990:intron | 45.0% |
!! | CCCTTTTCAGGGTTTGTCAA+AGG | + | tig0012398:1266-1285 | None:intergenic | 45.0% |
AGTAGAAGATGGGTGCTTTG+AGG | - | tig0012398:1322-1341 | Msa1351990:three_prime_UTR | 45.0% | |
!! | TTGCTAGACTTTTTCCAGGG+AGG | - | tig0012398:1974-1993 | Msa1351990:intron | 45.0% |
AGGAGTGAGTGAGAGATTAG+TGG | + | tig0012398:2190-2209 | None:intergenic | 45.0% | |
! | AGAAAGTGTGGTGGCAACTA+GGG | - | tig0012398:2589-2608 | Msa1351990:intron | 45.0% |
CTGAGTCAGTTACCACCAAT+AGG | - | tig0012398:2735-2754 | Msa1351990:intron | 45.0% | |
!! | GATCATGGGTTAGGAAAGTG+AGG | - | tig0012398:2876-2895 | Msa1351990:intron | 45.0% |
!!! | TTTAATATTTTCTTAAAAAT+GGG | + | tig0012398:1561-1580 | None:intergenic | 5.0% |
!!! | CTTTTTTAATATTTATAAAT+TGG | - | tig0012398:1762-1781 | Msa1351990:CDS | 5.0% |
!!! | TTTTTAATATTTATAAATTG+GGG | - | tig0012398:1764-1783 | Msa1351990:CDS | 5.0% |
!!! | TTTAATATTTTCTTAAAAAT+GGG | + | tig0012398:1561-1580 | None:intergenic | 5.0% |
!!! | CTTTTTTAATATTTATAAAT+TGG | - | tig0012398:1762-1781 | Msa1351990:CDS | 5.0% |
!!! | TTTTTAATATTTATAAATTG+GGG | - | tig0012398:1764-1783 | Msa1351990:CDS | 5.0% |
!! | GATGGGTGCTTTGAGGTTCA+AGG | - | tig0012398:1329-1348 | Msa1351990:three_prime_UTR | 50.0% |
ACTGCATTATCTGTCCTCCC+TGG | + | tig0012398:1991-2010 | None:intergenic | 50.0% | |
GTTCCAGTCGAGAGTCATCA+AGG | - | tig0012398:2249-2268 | Msa1351990:CDS | 50.0% | |
! | TAGCCTTGATGACTCTCGAC+TGG | + | tig0012398:2255-2274 | None:intergenic | 50.0% |
GTCGAGAGTCATCAAGGCTA+TGG | - | tig0012398:2255-2274 | Msa1351990:CDS | 50.0% | |
AGAATCACGACGAGGTTCAC+CGG | - | tig0012398:2462-2481 | Msa1351990:CDS | 50.0% | |
! | GAGAAAGTGTGGTGGCAACT+AGG | - | tig0012398:2588-2607 | Msa1351990:intron | 50.0% |
AGTGAGGGTAGTCAGATGCA+AGG | - | tig0012398:2892-2911 | Msa1351990:intron | 50.0% | |
GTGAGGGTAGTCAGATGCAA+GGG | - | tig0012398:2893-2912 | Msa1351990:CDS | 50.0% | |
TGCAAGGGAACCGTTTGTGT+TGG | - | tig0012398:2908-2927 | Msa1351990:CDS | 50.0% | |
GCAAGGGAACCGTTTGTGTT+GGG | - | tig0012398:2909-2928 | Msa1351990:CDS | 50.0% | |
!! | GGGCCTTGTTTGTTATGCTG+TGG | - | tig0012398:3166-3185 | Msa1351990:CDS | 50.0% |
!! | GATGGGTGCTTTGAGGTTCA+AGG | - | tig0012398:1329-1348 | Msa1351990:three_prime_UTR | 50.0% |
ACTGCATTATCTGTCCTCCC+TGG | + | tig0012398:1991-2010 | None:intergenic | 50.0% | |
GTTCCAGTCGAGAGTCATCA+AGG | - | tig0012398:2249-2268 | Msa1351990:CDS | 50.0% | |
! | TAGCCTTGATGACTCTCGAC+TGG | + | tig0012398:2255-2274 | None:intergenic | 50.0% |
GTCGAGAGTCATCAAGGCTA+TGG | - | tig0012398:2255-2274 | Msa1351990:CDS | 50.0% | |
AGAATCACGACGAGGTTCAC+CGG | - | tig0012398:2462-2481 | Msa1351990:CDS | 50.0% | |
! | GAGAAAGTGTGGTGGCAACT+AGG | - | tig0012398:2588-2607 | Msa1351990:intron | 50.0% |
AGTGAGGGTAGTCAGATGCA+AGG | - | tig0012398:2892-2911 | Msa1351990:intron | 50.0% | |
GTGAGGGTAGTCAGATGCAA+GGG | - | tig0012398:2893-2912 | Msa1351990:CDS | 50.0% | |
TGCAAGGGAACCGTTTGTGT+TGG | - | tig0012398:2908-2927 | Msa1351990:CDS | 50.0% | |
GCAAGGGAACCGTTTGTGTT+GGG | - | tig0012398:2909-2928 | Msa1351990:CDS | 50.0% | |
!! | GGGCCTTGTTTGTTATGCTG+TGG | - | tig0012398:3166-3185 | Msa1351990:CDS | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0012398 | gene | 1167 | 3268 | 1167 | ID=Msa1351990;Name=Msa1351990 |
tig0012398 | mRNA | 1167 | 3268 | 1167 | ID=Msa1351990-mRNA-1;Parent=Msa1351990;Name=Msa1351990-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.33|1|1|1|3|409|365 |
tig0012398 | exon | 1167 | 1856 | 1167 | ID=Msa1351990-mRNA-1:exon:7970;Parent=Msa1351990-mRNA-1 |
tig0012398 | exon | 2147 | 2587 | 2147 | ID=Msa1351990-mRNA-1:exon:7969;Parent=Msa1351990-mRNA-1 |
tig0012398 | exon | 2893 | 3268 | 2893 | ID=Msa1351990-mRNA-1:exon:7968;Parent=Msa1351990-mRNA-1 |
tig0012398 | CDS | 2893 | 3268 | 2893 | ID=Msa1351990-mRNA-1:cds;Parent=Msa1351990-mRNA-1 |
tig0012398 | CDS | 2147 | 2587 | 2147 | ID=Msa1351990-mRNA-1:cds;Parent=Msa1351990-mRNA-1 |
tig0012398 | CDS | 1576 | 1856 | 1576 | ID=Msa1351990-mRNA-1:cds;Parent=Msa1351990-mRNA-1 |
tig0012398 | three_prime_UTR | 1167 | 1575 | 1167 | ID=Msa1351990-mRNA-1:three_prime_utr;Parent=Msa1351990-mRNA-1 |
Gene Sequence |
Protein sequence |