Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1175030 | XP_003627434.1 | 96.538 | 780 | 16 | 1 | 1 | 780 | 1 | 769 | 0.0 | 1554 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1175030 | sp|Q6NQ79|ARID4_ARATH | 60.414 | 773 | 267 | 10 | 4 | 769 | 2 | 742 | 0.0 | 928 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa1175030 | TR | ARID |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0052300 | Msa1175030 | 0.817947 | 2.531502e-52 | -8.615850e-47 |
| Msa0052350 | Msa1175030 | 0.818160 | 2.265256e-52 | -8.615850e-47 |
| Msa0097360 | Msa1175030 | 0.808312 | 3.295516e-50 | -8.615850e-47 |
| Msa0146070 | Msa1175030 | 0.822334 | 2.504667e-53 | -8.615850e-47 |
| Msa1175030 | Msa1234580 | 0.854522 | 1.163674e-61 | -8.615850e-47 |
| Msa1175030 | Msa1315430 | 0.883417 | 4.568172e-71 | -8.615850e-47 |
| Msa1175030 | Msa1418960 | 0.826855 | 2.157135e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1175030 | MtrunA17_Chr8g0345011 | 96.410 | 780 | 16 | 2 | 1 | 780 | 1 | 768 | 0.0 | 1548 |
| Msa1175030 | MtrunA17_Chr2g0301851 | 60.714 | 784 | 267 | 11 | 2 | 770 | 1 | 758 | 0.0 | 947 |
| Msa1175030 | MtrunA17_Chr8g0352941 | 96.257 | 187 | 7 | 0 | 1 | 187 | 1 | 187 | 5.62e-126 | 374 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1175030 | AT3G43240.1 | 60.414 | 773 | 267 | 10 | 4 | 769 | 2 | 742 | 0.0 | 928 |
Find 227 sgRNAs with CRISPR-Local
Find 576 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTACCTTTGTTCTTGATTT+AGG | 0.044813 | 8_1:+6268377 | Msa1175030:three_prime_UTR |
| CCTTGAAAGTAAACAAAATT+TGG | 0.119113 | 8_1:-6261557 | None:intergenic |
| CTACCTTTGTTCTTGATTTA+GGG | 0.167772 | 8_1:+6268378 | Msa1175030:three_prime_UTR |
| GCAGGGTCTTGGCGCATTTA+AGG | 0.202754 | 8_1:+6267939 | Msa1175030:CDS |
| AAATTTACTAATTTAGATTA+TGG | 0.212669 | 8_1:+6268406 | Msa1175030:three_prime_UTR |
| TTCCCTGAGTTGGTTTCTTC+GGG | 0.216916 | 8_1:+6260380 | Msa1175030:CDS |
| GCTTCCTCAATGGGCTTTGC+AGG | 0.239030 | 8_1:+6264653 | Msa1175030:CDS |
| CTCTGCCTAGCTGGAGTTAA+TGG | 0.257092 | 8_1:-6265787 | None:intergenic |
| CTTTCAAGGGGAGCAGTTAC+TGG | 0.263650 | 8_1:+6261571 | Msa1175030:CDS |
| AGTGGACCTTCTGGTGTAAA+TGG | 0.273095 | 8_1:+6265871 | Msa1175030:CDS |
| CTGCAAAACTTTCTCCATTT+GGG | 0.274228 | 8_1:-6262173 | None:intergenic |
| GAATCCCATATGTTGTGTTT+TGG | 0.280927 | 8_1:+6262371 | Msa1175030:CDS |
| TTTCCCTGAGTTGGTTTCTT+CGG | 0.299281 | 8_1:+6260379 | Msa1175030:CDS |
| AAGAGCTCTGATATCTCTTC+AGG | 0.306181 | 8_1:-6261641 | None:intergenic |
| TGCAGAGGCCCTTCATCTTA+AGG | 0.306525 | 8_1:+6262191 | Msa1175030:CDS |
| GAGCTAATTCATATTCTAAA+AGG | 0.310868 | 8_1:-6267585 | None:intergenic |
| TCTGCAAAACTTTCTCCATT+TGG | 0.312545 | 8_1:-6262174 | None:intergenic |
| CAATGATGCTGATAGCGATA+TGG | 0.314916 | 8_1:+6262947 | Msa1175030:CDS |
| TGCCCCTCCACCACCGCTTC+AGG | 0.318880 | 8_1:+6263958 | Msa1175030:CDS |
| CACTAAAAGGTGTCATTCTA+TGG | 0.325620 | 8_1:-6265852 | None:intergenic |
| GATTCACACCTCTTTCTTGT+AGG | 0.334905 | 8_1:-6265688 | None:intergenic |
| ACACCAGAAGGTCCACTAAA+AGG | 0.337433 | 8_1:-6265865 | None:intergenic |
| CTTCAAATTACTGCTCATAA+TGG | 0.342001 | 8_1:-6268463 | None:intergenic |
| CCATGTTTCTTCAACGGTAA+TGG | 0.343971 | 8_1:-6266027 | None:intergenic |
| TAGATAGATTAGCGAAATAT+AGG | 0.344333 | 8_1:+6268276 | Msa1175030:three_prime_UTR |
| TCTTCATCATTGTGGATGTC+AGG | 0.348427 | 8_1:-6265727 | None:intergenic |
| AGGAAGTTGGTTCACTGGTT+TGG | 0.360399 | 8_1:+6261597 | Msa1175030:CDS |
| CATATCTCACTTCTAGTATC+TGG | 0.366260 | 8_1:+6264043 | Msa1175030:CDS |
| AAGGGAAAATGTATAGTCTT+AGG | 0.373149 | 8_1:+6268517 | Msa1175030:three_prime_UTR |
| GAAAGATGAACAAGAAAATT+CGG | 0.375092 | 8_1:-6259980 | None:intergenic |
| CCTTCTGGTGTAAATGGCTT+TGG | 0.390245 | 8_1:+6265877 | Msa1175030:CDS |
| CTTGGCATTGCTAGTATTCA+AGG | 0.391786 | 8_1:+6265532 | Msa1175030:CDS |
| GAGAAATTGAAGTGTGAGAA+AGG | 0.392670 | 8_1:-6260060 | None:intergenic |
| TTGTTCGACAGTAGTGCTGC+TGG | 0.395064 | 8_1:+6267859 | Msa1175030:intron |
| AGCTTAATCATAGTTTAAAC+TGG | 0.398194 | 8_1:-6268438 | None:intergenic |
| GATATGGGGCCACACCTTCT+TGG | 0.399730 | 8_1:+6262963 | Msa1175030:CDS |
| AAATCAAGAACAAAGGTAGA+AGG | 0.400577 | 8_1:-6268374 | None:intergenic |
| GAACTCGGCAAGCCCACCTT+GGG | 0.404076 | 8_1:-6267050 | None:intergenic |
| ACAGTAGTGCTGCTGGGGAT+TGG | 0.405607 | 8_1:+6267866 | Msa1175030:intron |
| TGAGTCATTGCTGAGATGTT+TGG | 0.406029 | 8_1:+6263437 | Msa1175030:CDS |
| TCATCATGTATCTGAATAGA+AGG | 0.407728 | 8_1:-6263065 | None:intergenic |
| CCCAATCCACACATCGCGTT+AGG | 0.409531 | 8_1:+6260031 | Msa1175030:five_prime_UTR |
| TCATGGAGTTTCTGATTCTC+CGG | 0.410638 | 8_1:+6267008 | Msa1175030:CDS |
| TGGCGTCGAACATGAGGAAT+TGG | 0.411641 | 8_1:-6265832 | None:intergenic |
| AAAATAATGCGTGACGGAAA+TGG | 0.412532 | 8_1:-6262423 | None:intergenic |
| CAAGTATCCTTTCCCTGAGT+TGG | 0.416051 | 8_1:+6260370 | Msa1175030:CDS |
| CCTAACGCGATGTGTGGATT+GGG | 0.417668 | 8_1:-6260031 | None:intergenic |
| CAGTAGTGCTGCTGGGGATT+GGG | 0.419128 | 8_1:+6267867 | Msa1175030:intron |
| TATCAAAGCTCTGATAAAGA+TGG | 0.426674 | 8_1:+6265607 | Msa1175030:CDS |
| CACCTCTTTCTTGTAGGAGG+GGG | 0.429083 | 8_1:-6265682 | None:intergenic |
| CCCTAACGCGATGTGTGGAT+TGG | 0.429762 | 8_1:-6260032 | None:intergenic |
| ACGTTGGCAATGGCATCAAC+TGG | 0.431163 | 8_1:+6267234 | Msa1175030:CDS |
| TAGCATGAAGCTTCCTCAAT+GGG | 0.431181 | 8_1:+6264644 | Msa1175030:CDS |
| AACTCTTTGCAATCCGGAAA+AGG | 0.432695 | 8_1:+6261502 | Msa1175030:CDS |
| CCAATACTACTACGCTTCAC+AGG | 0.433287 | 8_1:-6265934 | None:intergenic |
| TTTCCATTCAGAATGGCATC+AGG | 0.435615 | 8_1:-6267073 | None:intergenic |
| GCTGCCTGAAGCGGTGGTGG+AGG | 0.438692 | 8_1:-6263962 | None:intergenic |
| GGTTCAAACTCTTTGCAATC+CGG | 0.439687 | 8_1:+6261496 | Msa1175030:intron |
| AATGATGCTGATAGCGATAT+GGG | 0.440722 | 8_1:+6262948 | Msa1175030:CDS |
| TATATAAGTTGTAGAGATCA+AGG | 0.442313 | 8_1:-6267099 | None:intergenic |
| TCATCTTCTTCATCCATCTC+TGG | 0.448210 | 8_1:-6263014 | None:intergenic |
| ACAAATGTCAGTATGTCAAT+AGG | 0.450768 | 8_1:+6268332 | Msa1175030:three_prime_UTR |
| TGTGACAGAAGGCAGGGTCT+TGG | 0.452278 | 8_1:+6267928 | Msa1175030:CDS |
| GGATGTCAGGGCTAGCCCCT+TGG | 0.453940 | 8_1:-6265714 | None:intergenic |
| ACCTCAGAGCAAGTCTGTAC+CGG | 0.455288 | 8_1:-6266063 | None:intergenic |
| CCACAATGATGAAGAGGAAA+AGG | 0.457336 | 8_1:+6265735 | Msa1175030:CDS |
| ACCAAAATACCTTAAGATGA+AGG | 0.457949 | 8_1:-6262200 | None:intergenic |
| CATGGAGTTTCTGATTCTCC+GGG | 0.458678 | 8_1:+6267009 | Msa1175030:CDS |
| AATGCTGCTTGCTGTGTCAC+AGG | 0.459679 | 8_1:+6267626 | Msa1175030:CDS |
| GGGGAGGCTTCAACCAAATG+GGG | 0.466408 | 8_1:-6265663 | None:intergenic |
| AGGATAGGACAATGGTGAAT+GGG | 0.468465 | 8_1:+6265755 | Msa1175030:CDS |
| TCACACCTCTTTCTTGTAGG+AGG | 0.470346 | 8_1:-6265685 | None:intergenic |
| CCTGTGAAGCGTAGTAGTAT+TGG | 0.471268 | 8_1:+6265934 | Msa1175030:CDS |
| TTCCCTGATGCCATTCTGAA+TGG | 0.472931 | 8_1:+6267070 | Msa1175030:CDS |
| TTCAATGAAATAACCTGCTT+AGG | 0.475210 | 8_1:-6266003 | None:intergenic |
| GGATGAGGAAGTTGGTTCAC+TGG | 0.477657 | 8_1:+6261592 | Msa1175030:CDS |
| AGGTACCTGATCATTAAAAC+AGG | 0.479430 | 8_1:-6264077 | None:intergenic |
| CTCTGATATCTCTTCAGGGT+TGG | 0.486126 | 8_1:-6261636 | None:intergenic |
| AAGCTCATCTCAGCCTAAGC+AGG | 0.489092 | 8_1:+6265990 | Msa1175030:CDS |
| GGGAGGCTTCAACCAAATGG+GGG | 0.489152 | 8_1:-6265662 | None:intergenic |
| CCAATCCACACATCGCGTTA+GGG | 0.489507 | 8_1:+6260032 | Msa1175030:five_prime_UTR |
| ATGTTTCTTCTACAGGGAGT+TGG | 0.489899 | 8_1:+6267532 | Msa1175030:intron |
| CTGCCTGAAGCGGTGGTGGA+GGG | 0.490738 | 8_1:-6263961 | None:intergenic |
| AAGGATAGGACAATGGTGAA+TGG | 0.491742 | 8_1:+6265754 | Msa1175030:CDS |
| TGTTCGACAGTAGTGCTGCT+GGG | 0.492752 | 8_1:+6267860 | Msa1175030:intron |
| TCTGGTGTAAATGGCTTTGG+TGG | 0.494892 | 8_1:+6265880 | Msa1175030:CDS |
| AACACAGTAAAGCTTGAAAG+AGG | 0.495127 | 8_1:-6262895 | None:intergenic |
| GGAACTCGGCAAGCCCACCT+TGG | 0.495235 | 8_1:-6267051 | None:intergenic |
| GCAAGCTCCATGGCAAGTAT+AGG | 0.496463 | 8_1:+6263794 | Msa1175030:CDS |
| CAGTTACTGGATGAGGAAGT+TGG | 0.497802 | 8_1:+6261584 | Msa1175030:CDS |
| GATAAAGATGGATGTGATAA+CGG | 0.502582 | 8_1:+6265619 | Msa1175030:CDS |
| GGAGGCTTCAACCAAATGGG+GGG | 0.505795 | 8_1:-6265661 | None:intergenic |
| GGAATTTATTAAAGATGTCA+TGG | 0.506761 | 8_1:+6266991 | Msa1175030:CDS |
| GAAGCTGCCTGAAGCGGTGG+TGG | 0.510387 | 8_1:-6263965 | None:intergenic |
| CACACCTCTTTCTTGTAGGA+GGG | 0.510592 | 8_1:-6265684 | None:intergenic |
| TTAGCATGAAGCTTCCTCAA+TGG | 0.514746 | 8_1:+6264643 | Msa1175030:CDS |
| TTCACTGGTTTGGCAAGGTG+TGG | 0.516514 | 8_1:+6261607 | Msa1175030:CDS |
| CTTCGGTTGTGACAGAAGGC+AGG | 0.517549 | 8_1:+6267921 | Msa1175030:CDS |
| GCTGGGGATTGGGTGAATTG+TGG | 0.518001 | 8_1:+6267877 | Msa1175030:CDS |
| CTTCGATACAGTAGGACAAT+GGG | 0.518580 | 8_1:-6268497 | None:intergenic |
| TACCTTTGTTCTTGATTTAG+GGG | 0.522193 | 8_1:+6268379 | Msa1175030:three_prime_UTR |
| TCAGTATGTCAATAGGAGTA+AGG | 0.522710 | 8_1:+6268339 | Msa1175030:three_prime_UTR |
| AGGGGAGCAGTTACTGGATG+AGG | 0.522856 | 8_1:+6261577 | Msa1175030:CDS |
| CCTTCTGTCACAACCGAAGT+GGG | 0.523965 | 8_1:-6267917 | None:intergenic |
| CCCACTTCGGTTGTGACAGA+AGG | 0.524082 | 8_1:+6267917 | Msa1175030:CDS |
| GTTGGTTCACTGGTTTGGCA+AGG | 0.524333 | 8_1:+6261602 | Msa1175030:CDS |
| CAGAATGGCATCAGGGAACT+CGG | 0.525188 | 8_1:-6267065 | None:intergenic |
| TGCCTGAAGCGGTGGTGGAG+GGG | 0.526869 | 8_1:-6263960 | None:intergenic |
| TGGGTGAATTGTGGCATATG+TGG | 0.528030 | 8_1:+6267886 | Msa1175030:CDS |
| GAATCAGTCGGCTATGCCCC+CGG | 0.528908 | 8_1:-6267027 | None:intergenic |
| ACCTTTGTTCTTGATTTAGG+GGG | 0.529207 | 8_1:+6268380 | Msa1175030:three_prime_UTR |
| GATGATGAAGAAAGTTCCTC+AGG | 0.530128 | 8_1:+6263035 | Msa1175030:CDS |
| AATCAAGAACAAAGGTAGAA+GGG | 0.530607 | 8_1:-6268373 | None:intergenic |
| CTTCATCATTGTGGATGTCA+GGG | 0.531068 | 8_1:-6265726 | None:intergenic |
| GCAGGCAGCATATTGAGAAA+AGG | 0.532018 | 8_1:-6262401 | None:intergenic |
| AGCTTTGATAAAAGAAAAGC+AGG | 0.532122 | 8_1:-6265594 | None:intergenic |
| GTTTACTTAGAAATCCCAAA+TGG | 0.532260 | 8_1:+6262159 | Msa1175030:CDS |
| TCTTTCTCAAAAGAAGCTAC+AGG | 0.532796 | 8_1:-6265559 | None:intergenic |
| CAATGTTGACCCTCCAGAGA+TGG | 0.533538 | 8_1:+6263001 | Msa1175030:CDS |
| CCAAAATACCTTAAGATGAA+GGG | 0.533560 | 8_1:-6262199 | None:intergenic |
| AAACTTCGATAAGAAACATC+AGG | 0.533627 | 8_1:-6265502 | None:intergenic |
| GCCTTCTGTCACAACCGAAG+TGG | 0.533864 | 8_1:-6267918 | None:intergenic |
| CTTTGGTGGTGCCCATGTTG+AGG | 0.535826 | 8_1:+6265894 | Msa1175030:CDS |
| ATTACAGACAAATCAACAAA+GGG | 0.537357 | 8_1:-6268243 | None:intergenic |
| TCTCTACAACTTATATAAAG+AGG | 0.539055 | 8_1:+6267105 | Msa1175030:CDS |
| GGAGGATTTCACGTTGGCAA+TGG | 0.539913 | 8_1:+6267224 | Msa1175030:CDS |
| CGCCCCGAAGAAACCAACTC+AGG | 0.541385 | 8_1:-6260383 | None:intergenic |
| TATCGAAGTTTAGTTGCACT+TGG | 0.543468 | 8_1:+6265514 | Msa1175030:CDS |
| TCTTAGGTGGTTACAAGGGG+AGG | 0.545591 | 8_1:+6267206 | Msa1175030:intron |
| AGATAAGAAGAAGAAAACTA+AGG | 0.550861 | 8_1:-6263755 | None:intergenic |
| TCTTCTTCATCCATCTCTGG+AGG | 0.551868 | 8_1:-6263011 | None:intergenic |
| TGAGATATGTGCAGAACTGC+AGG | 0.552300 | 8_1:-6264029 | None:intergenic |
| AACAAAGGTAGAAGGGGTTG+AGG | 0.555660 | 8_1:-6268366 | None:intergenic |
| GTTGCAAATGGGTATTCTCA+AGG | 0.557448 | 8_1:+6268149 | Msa1175030:CDS |
| ACACCTCTTTCTTGTAGGAG+GGG | 0.558864 | 8_1:-6265683 | None:intergenic |
| CCATTACCGTTGAAGAAACA+TGG | 0.561425 | 8_1:+6266027 | Msa1175030:CDS |
| CCTTCGATACAGTAGGACAA+TGG | 0.561511 | 8_1:-6268498 | None:intergenic |
| CAACATACCTATACTTGCCA+TGG | 0.567611 | 8_1:-6263801 | None:intergenic |
| TTGCTGAGATGTTTGGAGGA+TGG | 0.568116 | 8_1:+6263444 | Msa1175030:CDS |
| CCATTGTCCTACTGTATCGA+AGG | 0.569449 | 8_1:+6268498 | Msa1175030:three_prime_UTR |
| TGGCAATGGCATCAACTGGA+AGG | 0.569612 | 8_1:+6267238 | Msa1175030:CDS |
| CTACAGCCATGTTTCTTCAA+CGG | 0.569703 | 8_1:-6266033 | None:intergenic |
| AACTTGAGATTTCTCATCTG+TGG | 0.569846 | 8_1:+6263095 | Msa1175030:CDS |
| GGTTTCTTCGGGGCGTCTCG+AGG | 0.575757 | 8_1:+6260391 | Msa1175030:CDS |
| ATCAAGAACAAAGGTAGAAG+GGG | 0.576306 | 8_1:-6268372 | None:intergenic |
| TAATGCGTGACGGAAATGGC+AGG | 0.576765 | 8_1:-6262419 | None:intergenic |
| ACATGGCTGTAGCAGAGGCC+CGG | 0.576956 | 8_1:+6266044 | Msa1175030:CDS |
| TGACATCCACAATGATGAAG+AGG | 0.577598 | 8_1:+6265729 | Msa1175030:CDS |
| TTGGCATTGCTAGTATTCAA+GGG | 0.579438 | 8_1:+6265533 | Msa1175030:CDS |
| AGAGCTCTGATATCTCTTCA+GGG | 0.580730 | 8_1:-6261640 | None:intergenic |
| CCTCAGAGCAAGTCTGTACC+GGG | 0.582355 | 8_1:-6266062 | None:intergenic |
| AAGAAACATGGCTGTAGCAG+AGG | 0.582907 | 8_1:+6266039 | Msa1175030:CDS |
| TTCAACAGAACGTGTTTCAG+AGG | 0.582910 | 8_1:-6260324 | None:intergenic |
| GAAGAAACCAACTCAGGGAA+AGG | 0.585243 | 8_1:-6260377 | None:intergenic |
| GCCGACTGATTCCCCAAGGT+GGG | 0.585564 | 8_1:+6267038 | Msa1175030:CDS |
| TTGTGGCATATGTGGTGAGT+GGG | 0.586975 | 8_1:+6267894 | Msa1175030:CDS |
| GTTCGACAGTAGTGCTGCTG+GGG | 0.589071 | 8_1:+6267861 | Msa1175030:intron |
| TAGTTGTCCCCTATTCCAGA+AGG | 0.589661 | 8_1:-6268214 | None:intergenic |
| CTTCTTCATCCATCTCTGGA+GGG | 0.590584 | 8_1:-6263010 | None:intergenic |
| ATTCTATGGCGTCGAACATG+AGG | 0.590589 | 8_1:-6265838 | None:intergenic |
| ATGATGAAGAGGAAAAGGAT+AGG | 0.591727 | 8_1:+6265740 | Msa1175030:CDS |
| CCAAAGCCATTTACACCAGA+AGG | 0.591921 | 8_1:-6265877 | None:intergenic |
| AGTTGTCCCCTATTCCAGAA+GGG | 0.595632 | 8_1:-6268213 | None:intergenic |
| TTCGGTTGTGACAGAAGGCA+GGG | 0.596812 | 8_1:+6267922 | Msa1175030:CDS |
| GTGGCACATAAGCCTCAACA+TGG | 0.597135 | 8_1:-6265906 | None:intergenic |
| ACATACAGCCGTCGGTAATG+TGG | 0.597154 | 8_1:-6261669 | None:intergenic |
| CTACGCTTCACAGGGACAAG+TGG | 0.597593 | 8_1:-6265925 | None:intergenic |
| ATGCGTAGTTGCAAGCTCCA+TGG | 0.599062 | 8_1:+6263784 | Msa1175030:CDS |
| AAAGAAGCTGCCTGAAGCGG+TGG | 0.599822 | 8_1:-6263968 | None:intergenic |
| ATGTTGCAGTTTCAGCCACA+AGG | 0.599844 | 8_1:+6260266 | Msa1175030:CDS |
| TAATTCATATTCTAAAAGGT+AGG | 0.599846 | 8_1:-6267581 | None:intergenic |
| GGCAATGGCATCAACTGGAA+GGG | 0.600155 | 8_1:+6267239 | Msa1175030:CDS |
| CAGAAGCTTACAACAGTGGA+AGG | 0.600470 | 8_1:-6263122 | None:intergenic |
| TTCCATTCAGAATGGCATCA+GGG | 0.602855 | 8_1:-6267072 | None:intergenic |
| TCCCTGAGTTGGTTTCTTCG+GGG | 0.603052 | 8_1:+6260381 | Msa1175030:CDS |
| AGATCTGCTTCAATAGCTTG+TGG | 0.605138 | 8_1:+6264603 | Msa1175030:CDS |
| AAAACCTGCAAAGCCCATTG+AGG | 0.606920 | 8_1:-6264657 | None:intergenic |
| CATTGTCCTACTGTATCGAA+GGG | 0.607990 | 8_1:+6268499 | Msa1175030:three_prime_UTR |
| CAATACTACTACGCTTCACA+GGG | 0.609711 | 8_1:-6265933 | None:intergenic |
| GTCATTGCTGAGATGTTTGG+AGG | 0.610079 | 8_1:+6263440 | Msa1175030:CDS |
| AGAGGTGTGAATCAAGCCAA+GGG | 0.613158 | 8_1:+6265698 | Msa1175030:CDS |
| GGTTGATATATCACATCGCA+TGG | 0.613948 | 8_1:-6264008 | None:intergenic |
| TTGCAAATGGGTATTCTCAA+GGG | 0.613998 | 8_1:+6268150 | Msa1175030:CDS |
| GGCGGAGGAAACTACATCAA+AGG | 0.615031 | 8_1:-6268190 | None:intergenic |
| TGAAACCCTAACGCGATGTG+TGG | 0.616383 | 8_1:-6260037 | None:intergenic |
| TGATCATTAAAACAGGCTTG+TGG | 0.616696 | 8_1:-6264070 | None:intergenic |
| GCCCCGAAGAAACCAACTCA+GGG | 0.619432 | 8_1:-6260382 | None:intergenic |
| ATAGTTTGTGCACAGCTCAA+CGG | 0.621033 | 8_1:+6264546 | Msa1175030:CDS |
| GCTTTACAGTGAAATTGTGA+AGG | 0.621529 | 8_1:-6260105 | None:intergenic |
| AAGAGGTGTGAATCAAGCCA+AGG | 0.621579 | 8_1:+6265697 | Msa1175030:CDS |
| AGCCGACTGATTCCCCAAGG+TGG | 0.622396 | 8_1:+6267037 | Msa1175030:CDS |
| GATTACAGACAAATCAACAA+AGG | 0.624148 | 8_1:-6268244 | None:intergenic |
| TGAATTAGCTCATGATGATG+TGG | 0.628032 | 8_1:+6267597 | Msa1175030:CDS |
| GCCCACCTTGGGGAATCAGT+CGG | 0.628960 | 8_1:-6267039 | None:intergenic |
| TTAGCTCATGATGATGTGGA+TGG | 0.631481 | 8_1:+6267601 | Msa1175030:CDS |
| ATTGTGGCATATGTGGTGAG+TGG | 0.631500 | 8_1:+6267893 | Msa1175030:CDS |
| ACAAGGGGAGGATTTCACGT+TGG | 0.631639 | 8_1:+6267218 | Msa1175030:CDS |
| TCAGCATCATTGCTATCAGT+AGG | 0.634321 | 8_1:-6262936 | None:intergenic |
| GCAGTTCATCTACACACACA+TGG | 0.635510 | 8_1:+6262850 | Msa1175030:intron |
| AGAGGAAAAGGATAGGACAA+TGG | 0.635674 | 8_1:+6265747 | Msa1175030:CDS |
| GCTTGAAAGAGGCACGTGCA+AGG | 0.637439 | 8_1:-6262884 | None:intergenic |
| TTCAGAATACATACAGCCGT+CGG | 0.639840 | 8_1:-6261677 | None:intergenic |
| GTTGTCCCCTATTCCAGAAG+GGG | 0.641666 | 8_1:-6268212 | None:intergenic |
| ATGGAGTTTCTGATTCTCCG+GGG | 0.643557 | 8_1:+6267010 | Msa1175030:CDS |
| GTTTGTTTAGAAGCTCCTTG+TGG | 0.645019 | 8_1:-6260281 | None:intergenic |
| AGACACTCACCAAGAAGGTG+TGG | 0.649077 | 8_1:-6262972 | None:intergenic |
| TGGAGTTTCTGATTCTCCGG+GGG | 0.651219 | 8_1:+6267011 | Msa1175030:CDS |
| CCACTGAAAATAATGCGTGA+CGG | 0.651651 | 8_1:-6262429 | None:intergenic |
| GCACACCATTAACTCCAGCT+AGG | 0.652707 | 8_1:+6265782 | Msa1175030:CDS |
| GATTAAAAGTATCAGCAATG+AGG | 0.652782 | 8_1:+6265809 | Msa1175030:CDS |
| CCCGGTACAGACTTGCTCTG+AGG | 0.653574 | 8_1:+6266062 | Msa1175030:CDS |
| TGTGGTGAGTGGGCCCACTT+CGG | 0.654753 | 8_1:+6267904 | Msa1175030:CDS |
| AATTGTAGTTAAACACGATG+AGG | 0.655078 | 8_1:-6260150 | None:intergenic |
| CATAGCCGACTGATTCCCCA+AGG | 0.655094 | 8_1:+6267034 | Msa1175030:CDS |
| TCCACAGAAGCTTACAACAG+TGG | 0.659825 | 8_1:-6263126 | None:intergenic |
| TTGTCCCCTATTCCAGAAGG+GGG | 0.660697 | 8_1:-6268211 | None:intergenic |
| TGAAAGAGGCACGTGCAAGG+TGG | 0.666954 | 8_1:-6262881 | None:intergenic |
| ATGATGCTGATAGCGATATG+GGG | 0.667822 | 8_1:+6262949 | Msa1175030:CDS |
| CTTCGATACCACATTACCGA+CGG | 0.677069 | 8_1:+6261661 | Msa1175030:CDS |
| AACTCGGCAAGCCCACCTTG+GGG | 0.678033 | 8_1:-6267049 | None:intergenic |
| AATAGAAGGAAGACTGCCTG+AGG | 0.683184 | 8_1:-6263051 | None:intergenic |
| CAGTTCATCTACACACACAT+GGG | 0.683334 | 8_1:+6262851 | Msa1175030:intron |
| TCAACGGTGAAGCAAACACA+CGG | 0.687021 | 8_1:+6264562 | Msa1175030:CDS |
| GCTATTGAAGCAGATCTGCG+AGG | 0.710579 | 8_1:-6264597 | None:intergenic |
| TGGCACATAAGCCTCAACAT+GGG | 0.713146 | 8_1:-6265905 | None:intergenic |
| AAATTCGTAACACTACAATG+AGG | 0.721351 | 8_1:-6268110 | None:intergenic |
| GAGGTGTGAATCAAGCCAAG+GGG | 0.748167 | 8_1:+6265699 | Msa1175030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAAATTCACTTTTATTT+TGG | + | chr8_1:6260420-6260439 | Msa1175030:intron | 10.0% |
| !!! | TTTTTTTTTTAATGAAATGA+AGG | + | chr8_1:6261475-6261494 | Msa1175030:intron | 10.0% |
| !! | GATTTAATATACAATTAAAT+AGG | - | chr8_1:6264369-6264388 | None:intergenic | 10.0% |
| !! | TTAATTGTATATTAAATCAA+CGG | + | chr8_1:6264371-6264390 | Msa1175030:intron | 10.0% |
| !!! | ATATTCTTTTTAAAGATAAA+TGG | - | chr8_1:6264862-6264881 | None:intergenic | 10.0% |
| !!! | ATTTTAAAAAATTCATGAAT+AGG | - | chr8_1:6266699-6266718 | None:intergenic | 10.0% |
| !!! | TTTTTAAAATACACATTTTT+TGG | + | chr8_1:6266709-6266728 | Msa1175030:intron | 10.0% |
| !! | TTTAAATTTAATTAATCCAT+TGG | - | chr8_1:6266939-6266958 | None:intergenic | 10.0% |
| !! | ATTAAAAAAAAATGAGAATT+AGG | + | chr8_1:6268299-6268318 | Msa1175030:three_prime_UTR | 10.0% |
| !! | AAATTTACTAATTTAGATTA+TGG | + | chr8_1:6268406-6268425 | Msa1175030:three_prime_UTR | 10.0% |
| !! | TTATATGTAATACGTAATAT+AGG | + | chr8_1:6261729-6261748 | Msa1175030:intron | 15.0% |
| !! | TATATGTAATACGTAATATA+GGG | + | chr8_1:6261730-6261749 | Msa1175030:intron | 15.0% |
| !!! | TTACTTTCTATGTTAATTTT+TGG | + | chr8_1:6261811-6261830 | Msa1175030:intron | 15.0% |
| !!! | TACTTTCTATGTTAATTTTT+GGG | + | chr8_1:6261812-6261831 | Msa1175030:intron | 15.0% |
| !!! | TTAATTTTTGGGTTATTTAT+TGG | + | chr8_1:6261823-6261842 | Msa1175030:intron | 15.0% |
| !!! | TTTTTGTTTTGAATTATGAA+TGG | + | chr8_1:6262702-6262721 | Msa1175030:intron | 15.0% |
| !!! | TGTTTTAGCTAAAAAAAAAA+AGG | - | chr8_1:6263161-6263180 | None:intergenic | 15.0% |
| !!! | ATCTTAAGATTTTTGTAAAA+TGG | - | chr8_1:6263544-6263563 | None:intergenic | 15.0% |
| !!! | TAAAGGTATATATTATTACA+AGG | - | chr8_1:6263925-6263944 | None:intergenic | 15.0% |
| !! | TGTAAAATTAGACAATTTAA+TGG | - | chr8_1:6264343-6264362 | None:intergenic | 15.0% |
| !! | ACTAAAAAAATAAAGAGAAA+TGG | - | chr8_1:6264789-6264808 | None:intergenic | 15.0% |
| !! | TTATAAGAATAACTTATGTT+TGG | + | chr8_1:6265363-6265382 | Msa1175030:intron | 15.0% |
| !!! | AATTATCAATTGTCTTATTT+TGG | + | chr8_1:6266488-6266507 | Msa1175030:intron | 15.0% |
| !! | AATATGGCTTATTTATATTT+AGG | - | chr8_1:6266747-6266766 | None:intergenic | 15.0% |
| !! | TAAATATAAATAAGCCATAT+TGG | + | chr8_1:6266746-6266765 | Msa1175030:intron | 15.0% |
| !! | AAATATAAATAAGCCATATT+GGG | + | chr8_1:6266747-6266766 | Msa1175030:intron | 15.0% |
| !!! | GAATATGGTTTAATTTTTTT+TGG | - | chr8_1:6266850-6266869 | None:intergenic | 15.0% |
| !!! | AGCTAGTTTATTTTTTTGAA+TGG | + | chr8_1:6260633-6260652 | Msa1175030:intron | 20.0% |
| !! | CAAAAAATACCAAAAATACA+GGG | + | chr8_1:6260772-6260791 | Msa1175030:intron | 20.0% |
| !!! | TATTTCTAAAATGTGGTTAT+AGG | + | chr8_1:6261134-6261153 | Msa1175030:intron | 20.0% |
| !!! | ACAATATGATGATTTTTTGT+TGG | + | chr8_1:6261170-6261189 | Msa1175030:intron | 20.0% |
| !! | AAAAACGTCTAAAAGTTTAA+TGG | - | chr8_1:6261206-6261225 | None:intergenic | 20.0% |
| !! | GAGTAAAAACAAAAACAAAA+CGG | - | chr8_1:6261429-6261448 | None:intergenic | 20.0% |
| !!! | CAAATTTTGTTTACTTTCAA+GGG | + | chr8_1:6261558-6261577 | Msa1175030:CDS | 20.0% |
| !!! | AAATTTTGTTTACTTTCAAG+GGG | + | chr8_1:6261559-6261578 | Msa1175030:CDS | 20.0% |
| !! | ATTCATGAGATGAAAAATTT+AGG | + | chr8_1:6262025-6262044 | Msa1175030:intron | 20.0% |
| !!! | TATTTTCAACATGCATTTTT+GGG | - | chr8_1:6263245-6263264 | None:intergenic | 20.0% |
| !!! | ATATTTTCAACATGCATTTT+TGG | - | chr8_1:6263246-6263265 | None:intergenic | 20.0% |
| !! | AAATGTTGAACAAAGTAATT+TGG | + | chr8_1:6263274-6263293 | Msa1175030:intron | 20.0% |
| !! | GAAACAAAACCATTTATAAT+TGG | - | chr8_1:6263408-6263427 | None:intergenic | 20.0% |
| !!! | ACTTTTTAGCATTAATTCAA+AGG | - | chr8_1:6263576-6263595 | None:intergenic | 20.0% |
| !!! | TTTCATTAGAAGTATGAATA+TGG | + | chr8_1:6263892-6263911 | Msa1175030:intron | 20.0% |
| !! | ACTAAACAATTAAATAGCAT+GGG | - | chr8_1:6264157-6264176 | None:intergenic | 20.0% |
| !! | AACTAAACAATTAAATAGCA+TGG | - | chr8_1:6264158-6264177 | None:intergenic | 20.0% |
| !!! | ATTGAAGTTAAAATTTTGTG+TGG | + | chr8_1:6264291-6264310 | Msa1175030:intron | 20.0% |
| !! | TAGACAATTTAATGGAAAAA+TGG | - | chr8_1:6264335-6264354 | None:intergenic | 20.0% |
| !!! | CTATTACATGTTGAAATTTT+TGG | + | chr8_1:6264435-6264454 | Msa1175030:intron | 20.0% |
| !!! | ATTTTTGGATTCTTATTCTT+TGG | + | chr8_1:6264450-6264469 | Msa1175030:intron | 20.0% |
| !!! | TTCTTTTTAAAGATAAATGG+AGG | - | chr8_1:6264859-6264878 | None:intergenic | 20.0% |
| !! | TAAGAATGGTTCATATATAA+TGG | + | chr8_1:6265183-6265202 | Msa1175030:intron | 20.0% |
| !! | AAGAATGGTTCATATATAAT+GGG | + | chr8_1:6265184-6265203 | Msa1175030:intron | 20.0% |
| !!! | ATTCCAATTCTTTTTCTAAT+TGG | + | chr8_1:6265393-6265412 | Msa1175030:intron | 20.0% |
| !! | ATTCCAATTAGAAAAAGAAT+TGG | - | chr8_1:6265399-6265418 | None:intergenic | 20.0% |
| !! | GAAAAGGATATTAAAAACAA+TGG | - | chr8_1:6266103-6266122 | None:intergenic | 20.0% |
| !! | ATAACATATGTAGCATTTAT+AGG | - | chr8_1:6266342-6266361 | None:intergenic | 20.0% |
| !! | AAAATAAAAGATTTCATCCT+TGG | - | chr8_1:6266659-6266678 | None:intergenic | 20.0% |
| !!! | AAATACACATTTTTTGGAAA+AGG | + | chr8_1:6266715-6266734 | Msa1175030:intron | 20.0% |
| !! | AGTATCGTTTAGTAATATTT+AGG | - | chr8_1:6266889-6266908 | None:intergenic | 20.0% |
| !! | TAAATATTACTAAACGATAC+TGG | + | chr8_1:6266888-6266907 | Msa1175030:intron | 20.0% |
| !!! | GGAAATTACAACTTTTAAAT+TGG | - | chr8_1:6266962-6266981 | None:intergenic | 20.0% |
| !!! | AGATTTGTTTTTGAATTTGT+TGG | + | chr8_1:6267180-6267199 | Msa1175030:intron | 20.0% |
| !!! | TTTTAAGATCCATAATTCAT+GGG | + | chr8_1:6267400-6267419 | Msa1175030:intron | 20.0% |
| !! | TGTTTGATTATTTACTAACT+GGG | - | chr8_1:6267458-6267477 | None:intergenic | 20.0% |
| !! | ATGTTTGATTATTTACTAAC+TGG | - | chr8_1:6267459-6267478 | None:intergenic | 20.0% |
| !! | ATATCTTATGTCAAATTAAC+TGG | + | chr8_1:6267483-6267502 | Msa1175030:intron | 20.0% |
| !!! | TAATTCATATTCTAAAAGGT+AGG | - | chr8_1:6267584-6267603 | None:intergenic | 20.0% |
| !! | AAAAACGATGTGTTATATTA+AGG | + | chr8_1:6268014-6268033 | Msa1175030:intron | 20.0% |
| ! | GAAAGATGAACAAGAAAATT+CGG | - | chr8_1:6259983-6260002 | None:intergenic | 25.0% |
| ! | AGTATATAGTATTGCAATGT+AGG | + | chr8_1:6260450-6260469 | Msa1175030:intron | 25.0% |
| !!! | TGTATTGCTAATTTTGTTTG+AGG | + | chr8_1:6260495-6260514 | Msa1175030:intron | 25.0% |
| !!! | CCTGTATTTTTGGTATTTTT+TGG | - | chr8_1:6260774-6260793 | None:intergenic | 25.0% |
| ! | CCAAAAAATACCAAAAATAC+AGG | + | chr8_1:6260771-6260790 | Msa1175030:intron | 25.0% |
| ! | TCTGATAAAAATTGAGTATC+TGG | + | chr8_1:6261107-6261126 | Msa1175030:intron | 25.0% |
| !!! | TGGTAGTTATTTCTAAAATG+TGG | + | chr8_1:6261127-6261146 | Msa1175030:intron | 25.0% |
| ! | TGTGATATTAGAAGTAGTTA+TGG | + | chr8_1:6261317-6261336 | Msa1175030:intron | 25.0% |
| ! | GTAAAATATCTTTACACAGA+CGG | + | chr8_1:6261387-6261406 | Msa1175030:intron | 25.0% |
| ! | AACATTGAAATAACATGATG+TGG | + | chr8_1:6261450-6261469 | Msa1175030:intron | 25.0% |
| ! | CCTTGAAAGTAAACAAAATT+TGG | - | chr8_1:6261560-6261579 | None:intergenic | 25.0% |
| !!! | CCAAATTTTGTTTACTTTCA+AGG | + | chr8_1:6261557-6261576 | Msa1175030:CDS | 25.0% |
| ! | AGATAAGTGAAGAAATAGAT+TGG | + | chr8_1:6261772-6261791 | Msa1175030:intron | 25.0% |
| !!! | TTTTTGGGTTATTTATTGGT+TGG | + | chr8_1:6261827-6261846 | Msa1175030:intron | 25.0% |
| !! | GTAACTTTCAAATTTTCTTC+AGG | + | chr8_1:6262137-6262156 | Msa1175030:intron | 25.0% |
| ! | TATAAAACTACCACAATGAA+AGG | - | chr8_1:6262313-6262332 | None:intergenic | 25.0% |
| !!! | TTCATTGTGGTAGTTTTATA+TGG | + | chr8_1:6262313-6262332 | Msa1175030:intron | 25.0% |
| !!! | GGTAGTTTTATATGGAATAT+TGG | + | chr8_1:6262321-6262340 | Msa1175030:intron | 25.0% |
| !! | TTTTCCAAAACACAACATAT+GGG | - | chr8_1:6262378-6262397 | None:intergenic | 25.0% |
| !! | TTTTTCCAAAACACAACATA+TGG | - | chr8_1:6262379-6262398 | None:intergenic | 25.0% |
| ! | AAAGAAAGAAAAAGTCATAC+TGG | - | chr8_1:6262743-6262762 | None:intergenic | 25.0% |
| !!! | TGACTTTTTCTTTCTTTTCA+TGG | + | chr8_1:6262746-6262765 | Msa1175030:intron | 25.0% |
| !! | CAGTCTTTTCCAATTATAAA+TGG | + | chr8_1:6263396-6263415 | Msa1175030:intron | 25.0% |
| !!! | AAATGGTTTTGTTTCTTTTC+AGG | + | chr8_1:6263413-6263432 | Msa1175030:intron | 25.0% |
| ! | TTATGTTCTATTGCTTTCAT+GGG | - | chr8_1:6263657-6263676 | None:intergenic | 25.0% |
| ! | TTTATGTTCTATTGCTTTCA+TGG | - | chr8_1:6263658-6263677 | None:intergenic | 25.0% |
| !! | TTTTTGTTGCAATTTTTCAC+AGG | + | chr8_1:6263729-6263748 | Msa1175030:intron | 25.0% |
| !! | TTTTGTTGCAATTTTTCACA+GGG | + | chr8_1:6263730-6263749 | Msa1175030:intron | 25.0% |
| ! | AGATAAGAAGAAGAAAACTA+AGG | - | chr8_1:6263758-6263777 | None:intergenic | 25.0% |
| !!! | TACTCGTCTTATTTTTCATT+AGG | + | chr8_1:6263868-6263887 | Msa1175030:intron | 25.0% |
| ! | AGGTATATATTATTACAAGG+TGG | - | chr8_1:6263922-6263941 | None:intergenic | 25.0% |
| ! | TATAATATATTCCTGTGCTT+TGG | + | chr8_1:6264220-6264239 | Msa1175030:intron | 25.0% |
| ! | AAAAAAATAATCCAAAGCAC+AGG | - | chr8_1:6264234-6264253 | None:intergenic | 25.0% |
| ! | TTTAATGGAAAAATGGTCAA+AGG | - | chr8_1:6264328-6264347 | None:intergenic | 25.0% |
| ! | ATATTGTAGCAGAGTTTATT+AGG | + | chr8_1:6264878-6264897 | Msa1175030:intron | 25.0% |
| ! | AATGCTGATATAACATGATA+AGG | + | chr8_1:6264907-6264926 | Msa1175030:intron | 25.0% |
| ! | GAACCATTCTTATAAAAGTA+AGG | - | chr8_1:6265175-6265194 | None:intergenic | 25.0% |
| ! | GATCAACAAATTTGAAAACA+GGG | - | chr8_1:6265241-6265260 | None:intergenic | 25.0% |
| ! | AGATCAACAAATTTGAAAAC+AGG | - | chr8_1:6265242-6265261 | None:intergenic | 25.0% |
| ! | TTCTGTGGTAAATAATGAAT+TGG | + | chr8_1:6265266-6265285 | Msa1175030:intron | 25.0% |
| ! | ATTTATAGGCACAAAAACAT+TGG | - | chr8_1:6265305-6265324 | None:intergenic | 25.0% |
| !! | TTTTGTGCCTATAAATTACA+TGG | + | chr8_1:6265309-6265328 | Msa1175030:intron | 25.0% |
| ! | TCAACATCCATGTAATTTAT+AGG | - | chr8_1:6265319-6265338 | None:intergenic | 25.0% |
| ! | CTTATAAGATACAAAACCTT+AGG | - | chr8_1:6265350-6265369 | None:intergenic | 25.0% |
| ! | ATATTAAAAACAATGGACAG+AGG | - | chr8_1:6266096-6266115 | None:intergenic | 25.0% |
| !! | AAAAAGTCTTTATGTCACTT+TGG | - | chr8_1:6266213-6266232 | None:intergenic | 25.0% |
| ! | TAATCATGTGATCAATTCTT+TGG | + | chr8_1:6266250-6266269 | Msa1175030:intron | 25.0% |
| ! | AAGTCGCATTACATTAATAT+TGG | - | chr8_1:6266414-6266433 | None:intergenic | 25.0% |
| ! | GATATTATGCAAATATGAAC+TGG | + | chr8_1:6266553-6266572 | Msa1175030:intron | 25.0% |
| ! | AAAAAGAAACGGATGTATTA+TGG | - | chr8_1:6266817-6266836 | None:intergenic | 25.0% |
| !!! | AATACATCCGTTTCTTTTTT+TGG | + | chr8_1:6266818-6266837 | Msa1175030:intron | 25.0% |
| ! | TTAAACCATATTCCATCAAA+TGG | + | chr8_1:6266857-6266876 | Msa1175030:intron | 25.0% |
| ! | GGAATTTATTAAAGATGTCA+TGG | + | chr8_1:6266991-6267010 | Msa1175030:CDS | 25.0% |
| ! | TATATAAGTTGTAGAGATCA+AGG | - | chr8_1:6267102-6267121 | None:intergenic | 25.0% |
| ! | TCTCTACAACTTATATAAAG+AGG | + | chr8_1:6267105-6267124 | Msa1175030:CDS | 25.0% |
| !!! | TTGAATTTGTTGGTTTTCTT+AGG | + | chr8_1:6267190-6267209 | Msa1175030:intron | 25.0% |
| !! | GGACAAATCTTTTCAAAAAT+GGG | + | chr8_1:6267260-6267279 | Msa1175030:CDS | 25.0% |
| !!! | CGATTTTTTTGTTTTGATTC+TGG | + | chr8_1:6267361-6267380 | Msa1175030:intron | 25.0% |
| !!! | CTTTTAAGATCCATAATTCA+TGG | + | chr8_1:6267399-6267418 | Msa1175030:intron | 25.0% |
| ! | GAGCTAATTCATATTCTAAA+AGG | - | chr8_1:6267588-6267607 | None:intergenic | 25.0% |
| ! | TAAATTATGACTCCTTAACA+GGG | - | chr8_1:6267732-6267751 | None:intergenic | 25.0% |
| ! | ATAAATTATGACTCCTTAAC+AGG | - | chr8_1:6267733-6267752 | None:intergenic | 25.0% |
| ! | CGAACAATAAAAAGATTGTA+AGG | - | chr8_1:6267846-6267865 | None:intergenic | 25.0% |
| !!! | TATAACACATCGTTTTTCAT+TGG | - | chr8_1:6268011-6268030 | None:intergenic | 25.0% |
| !!! | AAAAAACAAAGTGTTGCAAA+TGG | + | chr8_1:6268137-6268156 | Msa1175030:CDS | 25.0% |
| !!! | AAAAACAAAGTGTTGCAAAT+GGG | + | chr8_1:6268138-6268157 | Msa1175030:CDS | 25.0% |
| ! | ATTACAGACAAATCAACAAA+GGG | - | chr8_1:6268246-6268265 | None:intergenic | 25.0% |
| ! | TAGATAGATTAGCGAAATAT+AGG | + | chr8_1:6268276-6268295 | Msa1175030:three_prime_UTR | 25.0% |
| ! | AGCTTAATCATAGTTTAAAC+TGG | - | chr8_1:6268441-6268460 | None:intergenic | 25.0% |
| !!! | TGTAAAGCTGTTTTTCTCAT+CGG | + | chr8_1:6260120-6260139 | Msa1175030:five_prime_UTR | 30.0% |
| AATTGTAGTTAAACACGATG+AGG | - | chr8_1:6260153-6260172 | None:intergenic | 30.0% | |
| GTATATAAACACGAAGAAAG+CGG | + | chr8_1:6260668-6260687 | Msa1175030:intron | 30.0% | |
| TATATAAACACGAAGAAAGC+GGG | + | chr8_1:6260669-6260688 | Msa1175030:intron | 30.0% | |
| TCCAGCAAAGATTAAATCAT+TGG | + | chr8_1:6260991-6261010 | Msa1175030:intron | 30.0% | |
| !! | ATGCTTTTATGTGGACTATA+TGG | - | chr8_1:6261025-6261044 | None:intergenic | 30.0% |
| TAAGAGTAGAAGTTGAGAAT+GGG | + | chr8_1:6261052-6261071 | Msa1175030:intron | 30.0% | |
| CTAAAATGTGGTTATAGGAT+AGG | + | chr8_1:6261139-6261158 | Msa1175030:intron | 30.0% | |
| !! | TACTTACTAGTATTGACTGT+GGG | + | chr8_1:6261853-6261872 | Msa1175030:intron | 30.0% |
| AATCTAACATTCATAGACCA+TGG | - | chr8_1:6261928-6261947 | None:intergenic | 30.0% | |
| GTTTACTTAGAAATCCCAAA+TGG | + | chr8_1:6262159-6262178 | Msa1175030:CDS | 30.0% | |
| CCAAAATACCTTAAGATGAA+GGG | - | chr8_1:6262202-6262221 | None:intergenic | 30.0% | |
| ACCAAAATACCTTAAGATGA+AGG | - | chr8_1:6262203-6262222 | None:intergenic | 30.0% | |
| !!! | GTCTAAGTTTTGAGAAAACT+CGG | + | chr8_1:6262221-6262240 | Msa1175030:intron | 30.0% |
| AATCAACAATGATAGTCTGT+TGG | - | chr8_1:6262257-6262276 | None:intergenic | 30.0% | |
| TCAGTATAACAGTTAGGTTT+AGG | - | chr8_1:6262536-6262555 | None:intergenic | 30.0% | |
| GGAATAACTCGTAAAATATG+TGG | + | chr8_1:6262629-6262648 | Msa1175030:intron | 30.0% | |
| !!! | CATACTGGATTTTAAAACTC+TGG | - | chr8_1:6262728-6262747 | None:intergenic | 30.0% |
| CTTAACAAAATGTACGACTT+TGG | - | chr8_1:6262788-6262807 | None:intergenic | 30.0% | |
| TCATCATGTATCTGAATAGA+AGG | - | chr8_1:6263068-6263087 | None:intergenic | 30.0% | |
| GTCAAAATGAGACAAAAGAA+AGG | + | chr8_1:6263300-6263319 | Msa1175030:intron | 30.0% | |
| ! | GAGTAATAAAATGTGTTGGT+AGG | - | chr8_1:6263853-6263872 | None:intergenic | 30.0% |
| AGACGAGTAATAAAATGTGT+TGG | - | chr8_1:6263857-6263876 | None:intergenic | 30.0% | |
| ATTACTGAAACAAACAACCA+AGG | + | chr8_1:6264124-6264143 | Msa1175030:intron | 30.0% | |
| CATATATTACACTTCAGATG+TGG | - | chr8_1:6264398-6264417 | None:intergenic | 30.0% | |
| AAGCAGCAAAATTGGATAAA+AGG | - | chr8_1:6265034-6265053 | None:intergenic | 30.0% | |
| ! | TGCATTTTAAGCAGCAAAAT+TGG | - | chr8_1:6265042-6265061 | None:intergenic | 30.0% |
| GTACATGATATTAGAAACAG+AGG | - | chr8_1:6265091-6265110 | None:intergenic | 30.0% | |
| TCATTTGAAAGAGGAAATAC+GGG | - | chr8_1:6265132-6265151 | None:intergenic | 30.0% | |
| CTCATTTGAAAGAGGAAATA+CGG | - | chr8_1:6265133-6265152 | None:intergenic | 30.0% | |
| !! | TCGCCTTACTTTTATAAGAA+TGG | + | chr8_1:6265169-6265188 | Msa1175030:intron | 30.0% |
| TTTGTTGATCTACATTTCTG+TGG | + | chr8_1:6265251-6265270 | Msa1175030:intron | 30.0% | |
| GTAAATAATGAATTGGAAGC+AGG | + | chr8_1:6265273-6265292 | Msa1175030:intron | 30.0% | |
| GAAACGCAAGTAAATATGTT+TGG | - | chr8_1:6265429-6265448 | None:intergenic | 30.0% | |
| GAAGAAAGTAACAAGATGTT+TGG | - | chr8_1:6265462-6265481 | None:intergenic | 30.0% | |
| AAACTTCGATAAGAAACATC+AGG | - | chr8_1:6265505-6265524 | None:intergenic | 30.0% | |
| !! | TTCTTTTGAGAAAGATGATG+CGG | + | chr8_1:6265567-6265586 | Msa1175030:CDS | 30.0% |
| ! | AGCTTTGATAAAAGAAAAGC+AGG | - | chr8_1:6265597-6265616 | None:intergenic | 30.0% |
| ! | TATCAAAGCTCTGATAAAGA+TGG | + | chr8_1:6265607-6265626 | Msa1175030:CDS | 30.0% |
| GATAAAGATGGATGTGATAA+CGG | + | chr8_1:6265619-6265638 | Msa1175030:CDS | 30.0% | |
| !! | GATTAAAAGTATCAGCAATG+AGG | + | chr8_1:6265809-6265828 | Msa1175030:CDS | 30.0% |
| TTCAATGAAATAACCTGCTT+AGG | - | chr8_1:6266006-6266025 | None:intergenic | 30.0% | |
| AATTGATCACATGATTAGTG+AGG | - | chr8_1:6266247-6266266 | None:intergenic | 30.0% | |
| ! | AGCAAAAGAGATTTGAGATT+TGG | + | chr8_1:6266381-6266400 | Msa1175030:intron | 30.0% |
| TTAATTGTGCATACATCACT+AGG | - | chr8_1:6266459-6266478 | None:intergenic | 30.0% | |
| !! | ATTGAGAATACTCTAGAATG+TGG | - | chr8_1:6266606-6266625 | None:intergenic | 30.0% |
| TTGAAGTTAGTTATTCTCCA+AGG | + | chr8_1:6266639-6266658 | Msa1175030:intron | 30.0% | |
| GAGATTGATTAAACCCAATA+TGG | - | chr8_1:6266763-6266782 | None:intergenic | 30.0% | |
| AACGGATGTATTATGGAATA+TGG | - | chr8_1:6266810-6266829 | None:intergenic | 30.0% | |
| GAAGCAACCAAAAAAAGAAA+CGG | - | chr8_1:6266828-6266847 | None:intergenic | 30.0% | |
| TAACACCATTTGATGGAATA+TGG | - | chr8_1:6266865-6266884 | None:intergenic | 30.0% | |
| ! | TTTAGGATAACACCATTTGA+TGG | - | chr8_1:6266872-6266891 | None:intergenic | 30.0% |
| AAAGTTGTAATTTCCACTGT+AGG | + | chr8_1:6266967-6266986 | Msa1175030:intron | 30.0% | |
| TTAATAAATTCCTCCTACAG+TGG | - | chr8_1:6266983-6267002 | None:intergenic | 30.0% | |
| GTGTTTGTGGAGAATTATTA+TGG | + | chr8_1:6267143-6267162 | Msa1175030:intron | 30.0% | |
| !!! | AATTTGTTGGTTTTCTTAGG+TGG | + | chr8_1:6267193-6267212 | Msa1175030:intron | 30.0% |
| ! | GGGACAAATCTTTTCAAAAA+TGG | + | chr8_1:6267259-6267278 | Msa1175030:CDS | 30.0% |
| AGGATTATGCAAAAACAGAT+GGG | + | chr8_1:6268072-6268091 | Msa1175030:intron | 30.0% | |
| AAATTCGTAACACTACAATG+AGG | - | chr8_1:6268113-6268132 | None:intergenic | 30.0% | |
| GATTACAGACAAATCAACAA+AGG | - | chr8_1:6268247-6268266 | None:intergenic | 30.0% | |
| ACAAATGTCAGTATGTCAAT+AGG | + | chr8_1:6268332-6268351 | Msa1175030:three_prime_UTR | 30.0% | |
| AATCAAGAACAAAGGTAGAA+GGG | - | chr8_1:6268376-6268395 | None:intergenic | 30.0% | |
| AAATCAAGAACAAAGGTAGA+AGG | - | chr8_1:6268377-6268396 | None:intergenic | 30.0% | |
| TCTACCTTTGTTCTTGATTT+AGG | + | chr8_1:6268377-6268396 | Msa1175030:three_prime_UTR | 30.0% | |
| CTACCTTTGTTCTTGATTTA+GGG | + | chr8_1:6268378-6268397 | Msa1175030:three_prime_UTR | 30.0% | |
| TACCTTTGTTCTTGATTTAG+GGG | + | chr8_1:6268379-6268398 | Msa1175030:three_prime_UTR | 30.0% | |
| CTTCAAATTACTGCTCATAA+TGG | - | chr8_1:6268466-6268485 | None:intergenic | 30.0% | |
| AAGGGAAAATGTATAGTCTT+AGG | + | chr8_1:6268517-6268536 | Msa1175030:three_prime_UTR | 30.0% | |
| GAGAAATTGAAGTGTGAGAA+AGG | - | chr8_1:6260063-6260082 | None:intergenic | 35.0% | |
| GCTTTACAGTGAAATTGTGA+AGG | - | chr8_1:6260108-6260127 | None:intergenic | 35.0% | |
| ! | TGTTTGAGGCTCAAAAATAG+CGG | + | chr8_1:6260509-6260528 | Msa1175030:intron | 35.0% |
| CTGATTGAAATTGTTGTGTG+TGG | + | chr8_1:6260574-6260593 | Msa1175030:intron | 35.0% | |
| ! | ATTTTCTTTCCTTTGCTGCT+TGG | - | chr8_1:6260745-6260764 | None:intergenic | 35.0% |
| TACTCATCTTGTCTGTGATT+GGG | - | chr8_1:6260817-6260836 | None:intergenic | 35.0% | |
| !! | TGAATTTTCTAGCCTGGAAA+TGG | - | chr8_1:6260937-6260956 | None:intergenic | 35.0% |
| GCCAATGATTTAATCTTTGC+TGG | - | chr8_1:6260995-6261014 | None:intergenic | 35.0% | |
| ! | TAGTTTGGCATGCTTTTATG+TGG | - | chr8_1:6261034-6261053 | None:intergenic | 35.0% |
| CTCAACTTCTACTCTTAGTT+TGG | - | chr8_1:6261049-6261068 | None:intergenic | 35.0% | |
| CTAAGAGTAGAAGTTGAGAA+TGG | + | chr8_1:6261051-6261070 | Msa1175030:intron | 35.0% | |
| AAGAGTAGAAGTTGAGAATG+GGG | + | chr8_1:6261053-6261072 | Msa1175030:intron | 35.0% | |
| ! | TTACGAAACTGTTCCTTTTC+CGG | - | chr8_1:6261518-6261537 | None:intergenic | 35.0% |
| !! | GTACTTACTAGTATTGACTG+TGG | + | chr8_1:6261852-6261871 | Msa1175030:intron | 35.0% |
| !! | GTGAAGAATTTTAGAGACCA+TGG | + | chr8_1:6261908-6261927 | Msa1175030:intron | 35.0% |
| CTGCAAAACTTTCTCCATTT+GGG | - | chr8_1:6262176-6262195 | None:intergenic | 35.0% | |
| TCTGCAAAACTTTCTCCATT+TGG | - | chr8_1:6262177-6262196 | None:intergenic | 35.0% | |
| ! | AAATGGAGAAAGTTTTGCAG+AGG | + | chr8_1:6262176-6262195 | Msa1175030:CDS | 35.0% |
| !! | CCCTTCATCTTAAGGTATTT+TGG | + | chr8_1:6262199-6262218 | Msa1175030:intron | 35.0% |
| CACAAGAATACCTTTCATTG+TGG | + | chr8_1:6262300-6262319 | Msa1175030:intron | 35.0% | |
| ! | TATGGAATATTGGCTGATTC+AGG | + | chr8_1:6262331-6262350 | Msa1175030:intron | 35.0% |
| ! | ATTGGCTGATTCAGGTTATT+TGG | + | chr8_1:6262339-6262358 | Msa1175030:intron | 35.0% |
| ! | GAATCCCATATGTTGTGTTT+TGG | + | chr8_1:6262371-6262390 | Msa1175030:CDS | 35.0% |
| ! | AAAATAATGCGTGACGGAAA+TGG | - | chr8_1:6262426-6262445 | None:intergenic | 35.0% |
| GTGGTGCATTTACTATGAAA+TGG | + | chr8_1:6262500-6262519 | Msa1175030:intron | 35.0% | |
| CTTGCATCAGTATAACAGTT+AGG | - | chr8_1:6262542-6262561 | None:intergenic | 35.0% | |
| AACACAGTAAAGCTTGAAAG+AGG | - | chr8_1:6262898-6262917 | None:intergenic | 35.0% | |
| ! | AATGATGCTGATAGCGATAT+GGG | + | chr8_1:6262948-6262967 | Msa1175030:CDS | 35.0% |
| AACTTGAGATTTCTCATCTG+TGG | + | chr8_1:6263095-6263114 | Msa1175030:CDS | 35.0% | |
| AGATAAAACATCCACATCCA+CGG | + | chr8_1:6263369-6263388 | Msa1175030:intron | 35.0% | |
| CATATCTCACTTCTAGTATC+TGG | + | chr8_1:6264043-6264062 | Msa1175030:CDS | 35.0% | |
| TGATCATTAAAACAGGCTTG+TGG | - | chr8_1:6264073-6264092 | None:intergenic | 35.0% | |
| !!! | ACAAGCCTGTTTTAATGATC+AGG | + | chr8_1:6264072-6264091 | Msa1175030:CDS | 35.0% |
| AGGTACCTGATCATTAAAAC+AGG | - | chr8_1:6264080-6264099 | None:intergenic | 35.0% | |
| AAAAACAGTGCATAGACACT+TGG | - | chr8_1:6264104-6264123 | None:intergenic | 35.0% | |
| ATGATTCTCCAAGAGCTAAA+AGG | - | chr8_1:6264496-6264515 | None:intergenic | 35.0% | |
| !! | TTGGGTTGAGATAACAGAAA+GGG | + | chr8_1:6264956-6264975 | Msa1175030:intron | 35.0% |
| ! | AGTTAGTCTCTAGTGTTAAG+TGG | + | chr8_1:6264987-6265006 | Msa1175030:intron | 35.0% |
| ! | GTTAGTCTCTAGTGTTAAGT+GGG | + | chr8_1:6264988-6265007 | Msa1175030:intron | 35.0% |
| CGGGTAAAATCTAAAAGCAA+TGG | - | chr8_1:6265113-6265132 | None:intergenic | 35.0% | |
| GTTGTACTCTCATTTGAAAG+AGG | - | chr8_1:6265141-6265160 | None:intergenic | 35.0% | |
| TATCGAAGTTTAGTTGCACT+TGG | + | chr8_1:6265514-6265533 | Msa1175030:CDS | 35.0% | |
| TTGGCATTGCTAGTATTCAA+GGG | + | chr8_1:6265533-6265552 | Msa1175030:CDS | 35.0% | |
| TCTTTCTCAAAAGAAGCTAC+AGG | - | chr8_1:6265562-6265581 | None:intergenic | 35.0% | |
| ATGATGAAGAGGAAAAGGAT+AGG | + | chr8_1:6265740-6265759 | Msa1175030:CDS | 35.0% | |
| !! | CACTAAAAGGTGTCATTCTA+TGG | - | chr8_1:6265855-6265874 | None:intergenic | 35.0% |
| ! | CATAGAATGACACCTTTTAG+TGG | + | chr8_1:6265853-6265872 | Msa1175030:CDS | 35.0% |
| GGCATCTAATGATACTGAAA+AGG | - | chr8_1:6266119-6266138 | None:intergenic | 35.0% | |
| ! | AAGTAAAACTTTGGAGACCA+CGG | - | chr8_1:6266152-6266171 | None:intergenic | 35.0% |
| ACTCTAATGCAAACATCCAA+TGG | + | chr8_1:6266920-6266939 | Msa1175030:intron | 35.0% | |
| AGTCAGTGAAATTGTGTTTG+TGG | + | chr8_1:6267130-6267149 | Msa1175030:intron | 35.0% | |
| ! | GTTTTCTTAGGTGGTTACAA+GGG | + | chr8_1:6267202-6267221 | Msa1175030:intron | 35.0% |
| ! | TTTTCTTAGGTGGTTACAAG+GGG | + | chr8_1:6267203-6267222 | Msa1175030:intron | 35.0% |
| TTATGTACGCCCATGAATTA+TGG | - | chr8_1:6267412-6267431 | None:intergenic | 35.0% | |
| ! | TGAATTAGCTCATGATGATG+TGG | + | chr8_1:6267597-6267616 | Msa1175030:CDS | 35.0% |
| GATGTAAGTACATAATCTGC+AGG | - | chr8_1:6267705-6267724 | None:intergenic | 35.0% | |
| TGATGATTAACAGCCAAAAG+TGG | + | chr8_1:6267762-6267781 | Msa1175030:intron | 35.0% | |
| CAGGATTATGCAAAAACAGA+TGG | + | chr8_1:6268071-6268090 | Msa1175030:intron | 35.0% | |
| TTGCAAATGGGTATTCTCAA+GGG | + | chr8_1:6268150-6268169 | Msa1175030:CDS | 35.0% | |
| TCAGTATGTCAATAGGAGTA+AGG | + | chr8_1:6268339-6268358 | Msa1175030:three_prime_UTR | 35.0% | |
| ATCAAGAACAAAGGTAGAAG+GGG | - | chr8_1:6268375-6268394 | None:intergenic | 35.0% | |
| ACCTTTGTTCTTGATTTAGG+GGG | + | chr8_1:6268380-6268399 | Msa1175030:three_prime_UTR | 35.0% | |
| GTTTGTTTAGAAGCTCCTTG+TGG | - | chr8_1:6260284-6260303 | None:intergenic | 40.0% | |
| TTCAACAGAACGTGTTTCAG+AGG | - | chr8_1:6260327-6260346 | None:intergenic | 40.0% | |
| !! | TTTCCCTGAGTTGGTTTCTT+CGG | + | chr8_1:6260379-6260398 | Msa1175030:CDS | 40.0% |
| ! | GTTTTCCATTTCGGACTTTG+CGG | - | chr8_1:6260719-6260738 | None:intergenic | 40.0% |
| !! | GCTTGGTTCGTTTTCCATTT+CGG | - | chr8_1:6260728-6260747 | None:intergenic | 40.0% |
| GTACTCATCTTGTCTGTGAT+TGG | - | chr8_1:6260818-6260837 | None:intergenic | 40.0% | |
| !! | ATAGGGTGAATTTTCTAGCC+TGG | - | chr8_1:6260943-6260962 | None:intergenic | 40.0% |
| AAAATTCACCCTATCCACCA+AGG | + | chr8_1:6260949-6260968 | Msa1175030:intron | 40.0% | |
| AGAGTAGAAGTTGAGAATGG+GGG | + | chr8_1:6261054-6261073 | Msa1175030:intron | 40.0% | |
| CTGTCAGTGTAATTATAGCG+AGG | + | chr8_1:6261084-6261103 | Msa1175030:intron | 40.0% | |
| GGTTCAAACTCTTTGCAATC+CGG | + | chr8_1:6261496-6261515 | Msa1175030:intron | 40.0% | |
| AACTCTTTGCAATCCGGAAA+AGG | + | chr8_1:6261502-6261521 | Msa1175030:CDS | 40.0% | |
| ! | AGAGCTCTGATATCTCTTCA+GGG | - | chr8_1:6261643-6261662 | None:intergenic | 40.0% |
| ! | AAGAGCTCTGATATCTCTTC+AGG | - | chr8_1:6261644-6261663 | None:intergenic | 40.0% |
| TTCAGAATACATACAGCCGT+CGG | - | chr8_1:6261680-6261699 | None:intergenic | 40.0% | |
| ! | TATTGACTGTGGGTGAAAGA+AGG | + | chr8_1:6261863-6261882 | Msa1175030:intron | 40.0% |
| CCAACAACTCTTCTATCAAC+TGG | - | chr8_1:6261998-6262017 | None:intergenic | 40.0% | |
| !! | CCAGTTGATAGAAGAGTTGT+TGG | + | chr8_1:6261995-6262014 | Msa1175030:intron | 40.0% |
| CCACTGAAAATAATGCGTGA+CGG | - | chr8_1:6262432-6262451 | None:intergenic | 40.0% | |
| ! | CATTATTTTCAGTGGTGCAG+AGG | + | chr8_1:6262437-6262456 | Msa1175030:CDS | 40.0% |
| ATGCAAGTCATACTGATGTC+TGG | + | chr8_1:6262555-6262574 | Msa1175030:intron | 40.0% | |
| GTCATACTGATGTCTGGTTA+TGG | + | chr8_1:6262561-6262580 | Msa1175030:intron | 40.0% | |
| TTGACGACAAATCCATGTAG+CGG | + | chr8_1:6262594-6262613 | Msa1175030:intron | 40.0% | |
| CCATGACATGTAAGCTATAC+AGG | - | chr8_1:6262656-6262675 | None:intergenic | 40.0% | |
| CCTGTATAGCTTACATGTCA+TGG | + | chr8_1:6262653-6262672 | Msa1175030:intron | 40.0% | |
| CAGTTCATCTACACACACAT+GGG | + | chr8_1:6262851-6262870 | Msa1175030:intron | 40.0% | |
| TCAGCATCATTGCTATCAGT+AGG | - | chr8_1:6262939-6262958 | None:intergenic | 40.0% | |
| ! | CAATGATGCTGATAGCGATA+TGG | + | chr8_1:6262947-6262966 | Msa1175030:CDS | 40.0% |
| ! | ATGATGCTGATAGCGATATG+GGG | + | chr8_1:6262949-6262968 | Msa1175030:CDS | 40.0% |
| !!! | TTTTGAGACACTCACCAAGA+AGG | - | chr8_1:6262980-6262999 | None:intergenic | 40.0% |
| TCATCTTCTTCATCCATCTC+TGG | - | chr8_1:6263017-6263036 | None:intergenic | 40.0% | |
| GATGATGAAGAAAGTTCCTC+AGG | + | chr8_1:6263035-6263054 | Msa1175030:CDS | 40.0% | |
| TGAGTCATTGCTGAGATGTT+TGG | + | chr8_1:6263437-6263456 | Msa1175030:CDS | 40.0% | |
| AGTTTACTGTGAGTCTAAGC+TGG | + | chr8_1:6263593-6263612 | Msa1175030:intron | 40.0% | |
| GTTCTATTGCTTTCATGGGA+AGG | - | chr8_1:6263653-6263672 | None:intergenic | 40.0% | |
| GTAAAAAGCTACTCGACAAC+AGG | - | chr8_1:6263690-6263709 | None:intergenic | 40.0% | |
| AAAGTTCTCAGACAAGAGAC+TGG | - | chr8_1:6263712-6263731 | None:intergenic | 40.0% | |
| CAACATACCTATACTTGCCA+TGG | - | chr8_1:6263804-6263823 | None:intergenic | 40.0% | |
| GGTAGTACTAGTCATATGGA+AGG | - | chr8_1:6263832-6263851 | None:intergenic | 40.0% | |
| GGTAGGTAGTACTAGTCATA+TGG | - | chr8_1:6263836-6263855 | None:intergenic | 40.0% | |
| GGCACTATACAACAGCATAA+AGG | - | chr8_1:6263942-6263961 | None:intergenic | 40.0% | |
| ! | GGTTGATATATCACATCGCA+TGG | - | chr8_1:6264011-6264030 | None:intergenic | 40.0% |
| !!! | GCTTTTGACCTTTTAGCTCT+TGG | + | chr8_1:6264485-6264504 | Msa1175030:intron | 40.0% |
| ! | ATAGTTTGTGCACAGCTCAA+CGG | + | chr8_1:6264546-6264565 | Msa1175030:CDS | 40.0% |
| AGATCTGCTTCAATAGCTTG+TGG | + | chr8_1:6264603-6264622 | Msa1175030:CDS | 40.0% | |
| TTAGCATGAAGCTTCCTCAA+TGG | + | chr8_1:6264643-6264662 | Msa1175030:CDS | 40.0% | |
| TAGCATGAAGCTTCCTCAAT+GGG | + | chr8_1:6264644-6264663 | Msa1175030:CDS | 40.0% | |
| AAATGGCTTCCTAGCAAGAA+GGG | - | chr8_1:6264772-6264791 | None:intergenic | 40.0% | |
| !! | CTTGGGTTGAGATAACAGAA+AGG | + | chr8_1:6264955-6264974 | Msa1175030:intron | 40.0% |
| GATGTTGAGTATAGCACCTA+AGG | + | chr8_1:6265331-6265350 | Msa1175030:intron | 40.0% | |
| CTTGGCATTGCTAGTATTCA+AGG | + | chr8_1:6265532-6265551 | Msa1175030:CDS | 40.0% | |
| ! | ACGGCAATATAGTTTTCAGC+AGG | + | chr8_1:6265638-6265657 | Msa1175030:CDS | 40.0% |
| GATTCACACCTCTTTCTTGT+AGG | - | chr8_1:6265691-6265710 | None:intergenic | 40.0% | |
| CTTCATCATTGTGGATGTCA+GGG | - | chr8_1:6265729-6265748 | None:intergenic | 40.0% | |
| TCTTCATCATTGTGGATGTC+AGG | - | chr8_1:6265730-6265749 | None:intergenic | 40.0% | |
| TGACATCCACAATGATGAAG+AGG | + | chr8_1:6265729-6265748 | Msa1175030:CDS | 40.0% | |
| ! | CCTTTTCCTCTTCATCATTG+TGG | - | chr8_1:6265738-6265757 | None:intergenic | 40.0% |
| CCACAATGATGAAGAGGAAA+AGG | + | chr8_1:6265735-6265754 | Msa1175030:CDS | 40.0% | |
| AGAGGAAAAGGATAGGACAA+TGG | + | chr8_1:6265747-6265766 | Msa1175030:CDS | 40.0% | |
| AAGGATAGGACAATGGTGAA+TGG | + | chr8_1:6265754-6265773 | Msa1175030:CDS | 40.0% | |
| AGGATAGGACAATGGTGAAT+GGG | + | chr8_1:6265755-6265774 | Msa1175030:CDS | 40.0% | |
| ! | ACTTTTAATCTCTGCCTAGC+TGG | - | chr8_1:6265799-6265818 | None:intergenic | 40.0% |
| CAATACTACTACGCTTCACA+GGG | - | chr8_1:6265936-6265955 | None:intergenic | 40.0% | |
| CCATGTTTCTTCAACGGTAA+TGG | - | chr8_1:6266030-6266049 | None:intergenic | 40.0% | |
| CCATTACCGTTGAAGAAACA+TGG | + | chr8_1:6266027-6266046 | Msa1175030:CDS | 40.0% | |
| CTACAGCCATGTTTCTTCAA+CGG | - | chr8_1:6266036-6266055 | None:intergenic | 40.0% | |
| CCTTGGCACAAGTAAAACTT+TGG | - | chr8_1:6266161-6266180 | None:intergenic | 40.0% | |
| ! | CCAAAGTTTTACTTGTGCCA+AGG | + | chr8_1:6266158-6266177 | Msa1175030:intron | 40.0% |
| AATGCACTACATCAAAGCCT+TGG | - | chr8_1:6266178-6266197 | None:intergenic | 40.0% | |
| !! | GAGAATACTCTAGAATGTGG+TGG | - | chr8_1:6266603-6266622 | None:intergenic | 40.0% |
| GTTGTAATTTCCACTGTAGG+AGG | + | chr8_1:6266970-6266989 | Msa1175030:intron | 40.0% | |
| TCATGGAGTTTCTGATTCTC+CGG | + | chr8_1:6267008-6267027 | Msa1175030:CDS | 40.0% | |
| TTCCATTCAGAATGGCATCA+GGG | - | chr8_1:6267075-6267094 | None:intergenic | 40.0% | |
| TTTCCATTCAGAATGGCATC+AGG | - | chr8_1:6267076-6267095 | None:intergenic | 40.0% | |
| !! | AAGGCGTTTTCCATTCAGAA+TGG | - | chr8_1:6267083-6267102 | None:intergenic | 40.0% |
| ! | GGTTTTCTTAGGTGGTTACA+AGG | + | chr8_1:6267201-6267220 | Msa1175030:intron | 40.0% |
| CAAGCACGGAATATACACAA+AGG | - | chr8_1:6267326-6267345 | None:intergenic | 40.0% | |
| AACAATGAACCACACAAGCA+CGG | - | chr8_1:6267340-6267359 | None:intergenic | 40.0% | |
| TCCCATGATGTTTCTTCTAC+AGG | + | chr8_1:6267525-6267544 | Msa1175030:intron | 40.0% | |
| CCCTGTAGAAGAAACATCAT+GGG | - | chr8_1:6267529-6267548 | None:intergenic | 40.0% | |
| CCCATGATGTTTCTTCTACA+GGG | + | chr8_1:6267526-6267545 | Msa1175030:intron | 40.0% | |
| TCCCTGTAGAAGAAACATCA+TGG | - | chr8_1:6267530-6267549 | None:intergenic | 40.0% | |
| ATGTTTCTTCTACAGGGAGT+TGG | + | chr8_1:6267532-6267551 | Msa1175030:intron | 40.0% | |
| ! | TTAGCTCATGATGATGTGGA+TGG | + | chr8_1:6267601-6267620 | Msa1175030:CDS | 40.0% |
| AAGCAACTGCATAGCTTCAT+TGG | - | chr8_1:6267670-6267689 | None:intergenic | 40.0% | |
| ! | CTATGCAGTTGCTTTGTGTA+TGG | + | chr8_1:6267676-6267695 | Msa1175030:intron | 40.0% |
| CTTACATCATCTCCCTGTTA+AGG | + | chr8_1:6267717-6267736 | Msa1175030:intron | 40.0% | |
| ATTAACAGCCAAAAGTGGCT+GGG | + | chr8_1:6267767-6267786 | Msa1175030:intron | 40.0% | |
| CTGCAGAAGTTGTGAATGAA+GGG | - | chr8_1:6268054-6268073 | None:intergenic | 40.0% | |
| TTATGCAAAAACAGATGGGC+TGG | + | chr8_1:6268076-6268095 | Msa1175030:CDS | 40.0% | |
| GTTGCAAATGGGTATTCTCA+AGG | + | chr8_1:6268149-6268168 | Msa1175030:CDS | 40.0% | |
| TCCCCCTAAATCAAGAACAA+AGG | - | chr8_1:6268384-6268403 | None:intergenic | 40.0% | |
| CTTCGATACAGTAGGACAAT+GGG | - | chr8_1:6268500-6268519 | None:intergenic | 40.0% | |
| CATTGTCCTACTGTATCGAA+GGG | + | chr8_1:6268499-6268518 | Msa1175030:three_prime_UTR | 40.0% | |
| ! | CATTTTCCCTTCGATACAGT+AGG | - | chr8_1:6268508-6268527 | None:intergenic | 40.0% |
| ATGTTGCAGTTTCAGCCACA+AGG | + | chr8_1:6260266-6260285 | Msa1175030:CDS | 45.0% | |
| CAAGTATCCTTTCCCTGAGT+TGG | + | chr8_1:6260370-6260389 | Msa1175030:CDS | 45.0% | |
| GAAGAAACCAACTCAGGGAA+AGG | - | chr8_1:6260380-6260399 | None:intergenic | 45.0% | |
| !! | TTCCCTGAGTTGGTTTCTTC+GGG | + | chr8_1:6260380-6260399 | Msa1175030:CDS | 45.0% |
| GAAAACGAACCAAGCAGCAA+AGG | + | chr8_1:6260733-6260752 | Msa1175030:intron | 45.0% | |
| ATCTTGTCTGTGATTGGGCA+GGG | - | chr8_1:6260812-6260831 | None:intergenic | 45.0% | |
| GACAAGATGAGTACCACTAC+AGG | + | chr8_1:6260824-6260843 | Msa1175030:intron | 45.0% | |
| CTCTTGCTCCTTCTATGAGT+GGG | - | chr8_1:6260885-6260904 | None:intergenic | 45.0% | |
| !! | TCTAGCCTGGAAATGGATTG+TGG | - | chr8_1:6260930-6260949 | None:intergenic | 45.0% |
| ! | TGTTGAGTCCTTGGTGGATA+GGG | - | chr8_1:6260960-6260979 | None:intergenic | 45.0% |
| CAGTTACTGGATGAGGAAGT+TGG | + | chr8_1:6261584-6261603 | Msa1175030:CDS | 45.0% | |
| ! | AGGAAGTTGGTTCACTGGTT+TGG | + | chr8_1:6261597-6261616 | Msa1175030:CDS | 45.0% |
| CTCTGATATCTCTTCAGGGT+TGG | - | chr8_1:6261639-6261658 | None:intergenic | 45.0% | |
| CTTCGATACCACATTACCGA+CGG | + | chr8_1:6261661-6261680 | Msa1175030:CDS | 45.0% | |
| ATACCAACAATGCGAACTGG+GGG | - | chr8_1:6262102-6262121 | None:intergenic | 45.0% | |
| CATACCAACAATGCGAACTG+GGG | - | chr8_1:6262103-6262122 | None:intergenic | 45.0% | |
| CCATACCAACAATGCGAACT+GGG | - | chr8_1:6262104-6262123 | None:intergenic | 45.0% | |
| ACCATACCAACAATGCGAAC+TGG | - | chr8_1:6262105-6262124 | None:intergenic | 45.0% | |
| !! | TTCAGGTTATTTGGCTCTGC+AGG | + | chr8_1:6262348-6262367 | Msa1175030:intron | 45.0% |
| !! | TCAGGTTATTTGGCTCTGCA+GGG | + | chr8_1:6262349-6262368 | Msa1175030:intron | 45.0% |
| GCAGGCAGCATATTGAGAAA+AGG | - | chr8_1:6262404-6262423 | None:intergenic | 45.0% | |
| ! | CCGTCACGCATTATTTTCAG+TGG | + | chr8_1:6262429-6262448 | Msa1175030:CDS | 45.0% |
| ! | TTTTCAGTGGTGCAGAGGTA+TGG | + | chr8_1:6262442-6262461 | Msa1175030:intron | 45.0% |
| TGACGACAAATCCATGTAGC+GGG | + | chr8_1:6262595-6262614 | Msa1175030:intron | 45.0% | |
| TCTCATAATGACCCGCTACA+TGG | - | chr8_1:6262609-6262628 | None:intergenic | 45.0% | |
| !! | ATGTAGCGGGTCATTATGAG+AGG | + | chr8_1:6262608-6262627 | Msa1175030:intron | 45.0% |
| GCAGTTCATCTACACACACA+TGG | + | chr8_1:6262850-6262869 | Msa1175030:intron | 45.0% | |
| CTTCTTCATCCATCTCTGGA+GGG | - | chr8_1:6263013-6263032 | None:intergenic | 45.0% | |
| TCTTCTTCATCCATCTCTGG+AGG | - | chr8_1:6263014-6263033 | None:intergenic | 45.0% | |
| AATAGAAGGAAGACTGCCTG+AGG | - | chr8_1:6263054-6263073 | None:intergenic | 45.0% | |
| CAGAAGCTTACAACAGTGGA+AGG | - | chr8_1:6263125-6263144 | None:intergenic | 45.0% | |
| TCCACTGTTGTAAGCTTCTG+TGG | + | chr8_1:6263125-6263144 | Msa1175030:intron | 45.0% | |
| TCCACAGAAGCTTACAACAG+TGG | - | chr8_1:6263129-6263148 | None:intergenic | 45.0% | |
| TTGGAAAAGACTGTCTACCG+TGG | - | chr8_1:6263389-6263408 | None:intergenic | 45.0% | |
| GTCATTGCTGAGATGTTTGG+AGG | + | chr8_1:6263440-6263459 | Msa1175030:CDS | 45.0% | |
| TTGCTGAGATGTTTGGAGGA+TGG | + | chr8_1:6263444-6263463 | Msa1175030:CDS | 45.0% | |
| GAAAAAGAAGCTGCCTGAAG+CGG | - | chr8_1:6263974-6263993 | None:intergenic | 45.0% | |
| TGAGATATGTGCAGAACTGC+AGG | - | chr8_1:6264032-6264051 | None:intergenic | 45.0% | |
| ACAGTGCATAGACACTTGGA+AGG | - | chr8_1:6264100-6264119 | None:intergenic | 45.0% | |
| ATAGCATGGGCAGATAACCT+TGG | - | chr8_1:6264144-6264163 | None:intergenic | 45.0% | |
| TCAACGGTGAAGCAAACACA+CGG | + | chr8_1:6264562-6264581 | Msa1175030:CDS | 45.0% | |
| AAAACCTGCAAAGCCCATTG+AGG | - | chr8_1:6264660-6264679 | None:intergenic | 45.0% | |
| AATGGCTTCCTAGCAAGAAG+GGG | - | chr8_1:6264771-6264790 | None:intergenic | 45.0% | |
| GAAATGGCTTCCTAGCAAGA+AGG | - | chr8_1:6264773-6264792 | None:intergenic | 45.0% | |
| ATGCTGAGGCAAGGATTTCT+TGG | + | chr8_1:6264937-6264956 | Msa1175030:intron | 45.0% | |
| TGCTGAGGCAAGGATTTCTT+GGG | + | chr8_1:6264938-6264957 | Msa1175030:intron | 45.0% | |
| AGTGTTAAGTGGGTCACTTG+AGG | + | chr8_1:6264998-6265017 | Msa1175030:intron | 45.0% | |
| ACACCTCTTTCTTGTAGGAG+GGG | - | chr8_1:6265686-6265705 | None:intergenic | 45.0% | |
| CACACCTCTTTCTTGTAGGA+GGG | - | chr8_1:6265687-6265706 | None:intergenic | 45.0% | |
| TCACACCTCTTTCTTGTAGG+AGG | - | chr8_1:6265688-6265707 | None:intergenic | 45.0% | |
| ! | AAGAGGTGTGAATCAAGCCA+AGG | + | chr8_1:6265697-6265716 | Msa1175030:CDS | 45.0% |
| ! | AGAGGTGTGAATCAAGCCAA+GGG | + | chr8_1:6265698-6265717 | Msa1175030:CDS | 45.0% |
| ! | ATTCTATGGCGTCGAACATG+AGG | - | chr8_1:6265841-6265860 | None:intergenic | 45.0% |
| !! | ACACCTTTTAGTGGACCTTC+TGG | + | chr8_1:6265862-6265881 | Msa1175030:CDS | 45.0% |
| ACACCAGAAGGTCCACTAAA+AGG | - | chr8_1:6265868-6265887 | None:intergenic | 45.0% | |
| AGTGGACCTTCTGGTGTAAA+TGG | + | chr8_1:6265871-6265890 | Msa1175030:CDS | 45.0% | |
| CCAAAGCCATTTACACCAGA+AGG | - | chr8_1:6265880-6265899 | None:intergenic | 45.0% | |
| CCTTCTGGTGTAAATGGCTT+TGG | + | chr8_1:6265877-6265896 | Msa1175030:CDS | 45.0% | |
| !! | TCTGGTGTAAATGGCTTTGG+TGG | + | chr8_1:6265880-6265899 | Msa1175030:CDS | 45.0% |
| TGGCACATAAGCCTCAACAT+GGG | - | chr8_1:6265908-6265927 | None:intergenic | 45.0% | |
| CCAATACTACTACGCTTCAC+AGG | - | chr8_1:6265937-6265956 | None:intergenic | 45.0% | |
| CCTGTGAAGCGTAGTAGTAT+TGG | + | chr8_1:6265934-6265953 | Msa1175030:CDS | 45.0% | |
| AAGAAACATGGCTGTAGCAG+AGG | + | chr8_1:6266039-6266058 | Msa1175030:CDS | 45.0% | |
| AGATGCCTAGTATGATACCG+TGG | + | chr8_1:6266132-6266151 | Msa1175030:intron | 45.0% | |
| CATGGAGTTTCTGATTCTCC+GGG | + | chr8_1:6267009-6267028 | Msa1175030:CDS | 45.0% | |
| ATGGAGTTTCTGATTCTCCG+GGG | + | chr8_1:6267010-6267029 | Msa1175030:CDS | 45.0% | |
| TTCCCTGATGCCATTCTGAA+TGG | + | chr8_1:6267070-6267089 | Msa1175030:CDS | 45.0% | |
| GTGTATATTCCGTGCTTGTG+TGG | + | chr8_1:6267328-6267347 | Msa1175030:intron | 45.0% | |
| GATTAACAGCCAAAAGTGGC+TGG | + | chr8_1:6267766-6267785 | Msa1175030:intron | 45.0% | |
| !! | CATCAATACCCAGCCACTTT+TGG | - | chr8_1:6267778-6267797 | None:intergenic | 45.0% |
| TGGGTGAATTGTGGCATATG+TGG | + | chr8_1:6267886-6267905 | Msa1175030:CDS | 45.0% | |
| ATTGTGGCATATGTGGTGAG+TGG | + | chr8_1:6267893-6267912 | Msa1175030:CDS | 45.0% | |
| TTGTGGCATATGTGGTGAGT+GGG | + | chr8_1:6267894-6267913 | Msa1175030:CDS | 45.0% | |
| CCTGCAGAAGTTGTGAATGA+AGG | - | chr8_1:6268055-6268074 | None:intergenic | 45.0% | |
| CCTTCATTCACAACTTCTGC+AGG | + | chr8_1:6268052-6268071 | Msa1175030:intron | 45.0% | |
| AGTTGTCCCCTATTCCAGAA+GGG | - | chr8_1:6268216-6268235 | None:intergenic | 45.0% | |
| TAGTTGTCCCCTATTCCAGA+AGG | - | chr8_1:6268217-6268236 | None:intergenic | 45.0% | |
| AACAAAGGTAGAAGGGGTTG+AGG | - | chr8_1:6268369-6268388 | None:intergenic | 45.0% | |
| CCTTCGATACAGTAGGACAA+TGG | - | chr8_1:6268501-6268520 | None:intergenic | 45.0% | |
| CCATTGTCCTACTGTATCGA+AGG | + | chr8_1:6268498-6268517 | Msa1175030:three_prime_UTR | 45.0% | |
| CCTAACGCGATGTGTGGATT+GGG | - | chr8_1:6260034-6260053 | None:intergenic | 50.0% | |
| CCAATCCACACATCGCGTTA+GGG | + | chr8_1:6260032-6260051 | Msa1175030:five_prime_UTR | 50.0% | |
| TGAAACCCTAACGCGATGTG+TGG | - | chr8_1:6260040-6260059 | None:intergenic | 50.0% | |
| !! | TCCCTGAGTTGGTTTCTTCG+GGG | + | chr8_1:6260381-6260400 | Msa1175030:CDS | 50.0% |
| ! | GGGCTTCTGCCCTGTATTTT+TGG | - | chr8_1:6260784-6260803 | None:intergenic | 50.0% |
| TCTTGTCTGTGATTGGGCAG+GGG | - | chr8_1:6260811-6260830 | None:intergenic | 50.0% | |
| CATCTTGTCTGTGATTGGGC+AGG | - | chr8_1:6260813-6260832 | None:intergenic | 50.0% | |
| TTCCACCTCCCACTCATAGA+AGG | + | chr8_1:6260874-6260893 | Msa1175030:intron | 50.0% | |
| TTGCTCCTTCTATGAGTGGG+AGG | - | chr8_1:6260882-6260901 | None:intergenic | 50.0% | |
| GCTCTTGCTCCTTCTATGAG+TGG | - | chr8_1:6260886-6260905 | None:intergenic | 50.0% | |
| CTTCGCCACAATCCATTTCC+AGG | + | chr8_1:6260922-6260941 | Msa1175030:intron | 50.0% | |
| ! | CTGTTGAGTCCTTGGTGGAT+AGG | - | chr8_1:6260961-6260980 | None:intergenic | 50.0% |
| ATCCACCAAGGACTCAACAG+AGG | + | chr8_1:6260961-6260980 | Msa1175030:intron | 50.0% | |
| TTCCTCTGTTGAGTCCTTGG+TGG | - | chr8_1:6260966-6260985 | None:intergenic | 50.0% | |
| CTCTTCCTCTGTTGAGTCCT+TGG | - | chr8_1:6260969-6260988 | None:intergenic | 50.0% | |
| CTTTCAAGGGGAGCAGTTAC+TGG | + | chr8_1:6261571-6261590 | Msa1175030:CDS | 50.0% | |
| ! | GGATGAGGAAGTTGGTTCAC+TGG | + | chr8_1:6261592-6261611 | Msa1175030:CDS | 50.0% |
| !! | GTTGGTTCACTGGTTTGGCA+AGG | + | chr8_1:6261602-6261621 | Msa1175030:CDS | 50.0% |
| !! | TTCACTGGTTTGGCAAGGTG+TGG | + | chr8_1:6261607-6261626 | Msa1175030:CDS | 50.0% |
| ACATACAGCCGTCGGTAATG+TGG | - | chr8_1:6261672-6261691 | None:intergenic | 50.0% | |
| TACCAACAATGCGAACTGGG+GGG | - | chr8_1:6262101-6262120 | None:intergenic | 50.0% | |
| CCCAGTTCGCATTGTTGGTA+TGG | + | chr8_1:6262101-6262120 | Msa1175030:intron | 50.0% | |
| TGCAGAGGCCCTTCATCTTA+AGG | + | chr8_1:6262191-6262210 | Msa1175030:CDS | 50.0% | |
| ! | TAATGCGTGACGGAAATGGC+AGG | - | chr8_1:6262422-6262441 | None:intergenic | 50.0% |
| GATTGCAACTTGCATGCACG+TGG | + | chr8_1:6262481-6262500 | Msa1175030:intron | 50.0% | |
| AGACACTCACCAAGAAGGTG+TGG | - | chr8_1:6262975-6262994 | None:intergenic | 50.0% | |
| CAATGTTGACCCTCCAGAGA+TGG | + | chr8_1:6263001-6263020 | Msa1175030:CDS | 50.0% | |
| AAGACTGTCTACCGTGGATG+TGG | - | chr8_1:6263383-6263402 | None:intergenic | 50.0% | |
| CCACGAGATTGGACAGTGAT+GGG | - | chr8_1:6263630-6263649 | None:intergenic | 50.0% | |
| ATGCGTAGTTGCAAGCTCCA+TGG | + | chr8_1:6263784-6263803 | Msa1175030:CDS | 50.0% | |
| GCAAGCTCCATGGCAAGTAT+AGG | + | chr8_1:6263794-6263813 | Msa1175030:CDS | 50.0% | |
| ! | CAGGCAGCTTCTTTTTCTCG+CGG | + | chr8_1:6263977-6263996 | Msa1175030:CDS | 50.0% |
| GCTATTGAAGCAGATCTGCG+AGG | - | chr8_1:6264600-6264619 | None:intergenic | 50.0% | |
| ATGTGTCACCCCTTCTTGCT+AGG | + | chr8_1:6264760-6264779 | Msa1175030:intron | 50.0% | |
| CACCTCTTTCTTGTAGGAGG+GGG | - | chr8_1:6265685-6265704 | None:intergenic | 50.0% | |
| GAGGTGTGAATCAAGCCAAG+GGG | + | chr8_1:6265699-6265718 | Msa1175030:CDS | 50.0% | |
| GCACACCATTAACTCCAGCT+AGG | + | chr8_1:6265782-6265801 | Msa1175030:CDS | 50.0% | |
| CTCTGCCTAGCTGGAGTTAA+TGG | - | chr8_1:6265790-6265809 | None:intergenic | 50.0% | |
| ! | TGGCGTCGAACATGAGGAAT+TGG | - | chr8_1:6265835-6265854 | None:intergenic | 50.0% |
| GTGGCACATAAGCCTCAACA+TGG | - | chr8_1:6265909-6265928 | None:intergenic | 50.0% | |
| AAGCTCATCTCAGCCTAAGC+AGG | + | chr8_1:6265990-6266009 | Msa1175030:CDS | 50.0% | |
| ACCTCAGAGCAAGTCTGTAC+CGG | - | chr8_1:6266066-6266085 | None:intergenic | 50.0% | |
| GGAGACCACGGTATCATACT+AGG | - | chr8_1:6266140-6266159 | None:intergenic | 50.0% | |
| TGGAGTTTCTGATTCTCCGG+GGG | + | chr8_1:6267011-6267030 | Msa1175030:CDS | 50.0% | |
| CAGAATGGCATCAGGGAACT+CGG | - | chr8_1:6267068-6267087 | None:intergenic | 50.0% | |
| TCTTAGGTGGTTACAAGGGG+AGG | + | chr8_1:6267206-6267225 | Msa1175030:intron | 50.0% | |
| ACAAGGGGAGGATTTCACGT+TGG | + | chr8_1:6267218-6267237 | Msa1175030:CDS | 50.0% | |
| GGAGGATTTCACGTTGGCAA+TGG | + | chr8_1:6267224-6267243 | Msa1175030:CDS | 50.0% | |
| ACGTTGGCAATGGCATCAAC+TGG | + | chr8_1:6267234-6267253 | Msa1175030:CDS | 50.0% | |
| TGGCAATGGCATCAACTGGA+AGG | + | chr8_1:6267238-6267257 | Msa1175030:CDS | 50.0% | |
| GGCAATGGCATCAACTGGAA+GGG | + | chr8_1:6267239-6267258 | Msa1175030:CDS | 50.0% | |
| !! | AATGCTGCTTGCTGTGTCAC+AGG | + | chr8_1:6267626-6267645 | Msa1175030:CDS | 50.0% |
| TTGTTCGACAGTAGTGCTGC+TGG | + | chr8_1:6267859-6267878 | Msa1175030:intron | 50.0% | |
| ! | TGTTCGACAGTAGTGCTGCT+GGG | + | chr8_1:6267860-6267879 | Msa1175030:intron | 50.0% |
| CCTTCTGTCACAACCGAAGT+GGG | - | chr8_1:6267920-6267939 | None:intergenic | 50.0% | |
| TTCGGTTGTGACAGAAGGCA+GGG | + | chr8_1:6267922-6267941 | Msa1175030:CDS | 50.0% | |
| GGCGGAGGAAACTACATCAA+AGG | - | chr8_1:6268193-6268212 | None:intergenic | 50.0% | |
| TTGTCCCCTATTCCAGAAGG+GGG | - | chr8_1:6268214-6268233 | None:intergenic | 50.0% | |
| GTTGTCCCCTATTCCAGAAG+GGG | - | chr8_1:6268215-6268234 | None:intergenic | 50.0% | |
| CCCAATCCACACATCGCGTT+AGG | + | chr8_1:6260031-6260050 | Msa1175030:five_prime_UTR | 55.0% | |
| CCCTAACGCGATGTGTGGAT+TGG | - | chr8_1:6260035-6260054 | None:intergenic | 55.0% | |
| GCCCCGAAGAAACCAACTCA+GGG | - | chr8_1:6260385-6260404 | None:intergenic | 55.0% | |
| TCGGACTTTGCGGCTAGGTT+TGG | - | chr8_1:6260709-6260728 | None:intergenic | 55.0% | |
| CCATTTCGGACTTTGCGGCT+AGG | - | chr8_1:6260714-6260733 | None:intergenic | 55.0% | |
| CCTAGCCGCAAAGTCCGAAA+TGG | + | chr8_1:6260711-6260730 | Msa1175030:intron | 55.0% | |
| TTGTCTGTGATTGGGCAGGG+GGG | - | chr8_1:6260809-6260828 | None:intergenic | 55.0% | |
| CTTGTCTGTGATTGGGCAGG+GGG | - | chr8_1:6260810-6260829 | None:intergenic | 55.0% | |
| TACCACTACAGGACCCTACC+AGG | + | chr8_1:6260835-6260854 | Msa1175030:intron | 55.0% | |
| GTCATGTGCTGGACCTGGTA+GGG | - | chr8_1:6260851-6260870 | None:intergenic | 55.0% | |
| CTACCAGGTCCAGCACATGA+CGG | + | chr8_1:6260850-6260869 | Msa1175030:intron | 55.0% | |
| TACCAGGTCCAGCACATGAC+GGG | + | chr8_1:6260851-6260870 | Msa1175030:intron | 55.0% | |
| CTCCTTCTATGAGTGGGAGG+TGG | - | chr8_1:6260879-6260898 | None:intergenic | 55.0% | |
| AGGGGAGCAGTTACTGGATG+AGG | + | chr8_1:6261577-6261596 | Msa1175030:CDS | 55.0% | |
| ACCAACAATGCGAACTGGGG+GGG | - | chr8_1:6262100-6262119 | None:intergenic | 55.0% | |
| ! | TGAAAGAGGCACGTGCAAGG+TGG | - | chr8_1:6262884-6262903 | None:intergenic | 55.0% |
| ! | GCTTGAAAGAGGCACGTGCA+AGG | - | chr8_1:6262887-6262906 | None:intergenic | 55.0% |
| GATATGGGGCCACACCTTCT+TGG | + | chr8_1:6262963-6262982 | Msa1175030:CDS | 55.0% | |
| CCCATCACTGTCCAATCTCG+TGG | + | chr8_1:6263627-6263646 | Msa1175030:intron | 55.0% | |
| GCCACGAGATTGGACAGTGA+TGG | - | chr8_1:6263631-6263650 | None:intergenic | 55.0% | |
| TCATGGGAAGGCCACGAGAT+TGG | - | chr8_1:6263641-6263660 | None:intergenic | 55.0% | |
| AAAGAAGCTGCCTGAAGCGG+TGG | - | chr8_1:6263971-6263990 | None:intergenic | 55.0% | |
| ! | GCTTCCTCAATGGGCTTTGC+AGG | + | chr8_1:6264653-6264672 | Msa1175030:CDS | 55.0% |
| ! | TTTTCAGCAGGCCCCCCATT+TGG | + | chr8_1:6265650-6265669 | Msa1175030:CDS | 55.0% |
| GGAGGCTTCAACCAAATGGG+GGG | - | chr8_1:6265664-6265683 | None:intergenic | 55.0% | |
| GGGAGGCTTCAACCAAATGG+GGG | - | chr8_1:6265665-6265684 | None:intergenic | 55.0% | |
| GGGGAGGCTTCAACCAAATG+GGG | - | chr8_1:6265666-6265685 | None:intergenic | 55.0% | |
| GGGGGAGGCTTCAACCAAAT+GGG | - | chr8_1:6265667-6265686 | None:intergenic | 55.0% | |
| AGGGGGAGGCTTCAACCAAA+TGG | - | chr8_1:6265668-6265687 | None:intergenic | 55.0% | |
| CTCTTTCTTGTAGGAGGGGG+AGG | - | chr8_1:6265682-6265701 | None:intergenic | 55.0% | |
| CTCCCCCTCCTACAAGAAAG+AGG | + | chr8_1:6265680-6265699 | Msa1175030:CDS | 55.0% | |
| !! | CTTTGGTGGTGCCCATGTTG+AGG | + | chr8_1:6265894-6265913 | Msa1175030:CDS | 55.0% |
| CTACGCTTCACAGGGACAAG+TGG | - | chr8_1:6265928-6265947 | None:intergenic | 55.0% | |
| CCTCAGAGCAAGTCTGTACC+GGG | - | chr8_1:6266065-6266084 | None:intergenic | 55.0% | |
| ! | CATAGCCGACTGATTCCCCA+AGG | + | chr8_1:6267034-6267053 | Msa1175030:CDS | 55.0% |
| ! | GTTCGACAGTAGTGCTGCTG+GGG | + | chr8_1:6267861-6267880 | Msa1175030:intron | 55.0% |
| ! | ACAGTAGTGCTGCTGGGGAT+TGG | + | chr8_1:6267866-6267885 | Msa1175030:intron | 55.0% |
| ! | CAGTAGTGCTGCTGGGGATT+GGG | + | chr8_1:6267867-6267886 | Msa1175030:intron | 55.0% |
| GCTGGGGATTGGGTGAATTG+TGG | + | chr8_1:6267877-6267896 | Msa1175030:CDS | 55.0% | |
| CCCACTTCGGTTGTGACAGA+AGG | + | chr8_1:6267917-6267936 | Msa1175030:CDS | 55.0% | |
| GCCTTCTGTCACAACCGAAG+TGG | - | chr8_1:6267921-6267940 | None:intergenic | 55.0% | |
| CTTCGGTTGTGACAGAAGGC+AGG | + | chr8_1:6267921-6267940 | Msa1175030:CDS | 55.0% | |
| TGTGACAGAAGGCAGGGTCT+TGG | + | chr8_1:6267928-6267947 | Msa1175030:CDS | 55.0% | |
| GCAGGGTCTTGGCGCATTTA+AGG | + | chr8_1:6267939-6267958 | Msa1175030:CDS | 55.0% | |
| CGCCCCGAAGAAACCAACTC+AGG | - | chr8_1:6260386-6260405 | None:intergenic | 60.0% | |
| GACCTGGTAGGGTCCTGTAG+TGG | - | chr8_1:6260840-6260859 | None:intergenic | 60.0% | |
| CGTCATGTGCTGGACCTGGT+AGG | - | chr8_1:6260852-6260871 | None:intergenic | 60.0% | |
| AACCCGTCATGTGCTGGACC+TGG | - | chr8_1:6260856-6260875 | None:intergenic | 60.0% | |
| AGGTGGAACCCGTCATGTGC+TGG | - | chr8_1:6260862-6260881 | None:intergenic | 60.0% | |
| TCCCCCCCAGTTCGCATTGT+TGG | + | chr8_1:6262096-6262115 | Msa1175030:intron | 60.0% | |
| ACATGGCTGTAGCAGAGGCC+CGG | + | chr8_1:6266044-6266063 | Msa1175030:CDS | 60.0% | |
| ! | CCCGGTACAGACTTGCTCTG+AGG | + | chr8_1:6266062-6266081 | Msa1175030:CDS | 60.0% |
| GAATCAGTCGGCTATGCCCC+CGG | - | chr8_1:6267030-6267049 | None:intergenic | 60.0% | |
| ! | AGCCGACTGATTCCCCAAGG+TGG | + | chr8_1:6267037-6267056 | Msa1175030:CDS | 60.0% |
| ! | GCCGACTGATTCCCCAAGGT+GGG | + | chr8_1:6267038-6267057 | Msa1175030:CDS | 60.0% |
| GCCCACCTTGGGGAATCAGT+CGG | - | chr8_1:6267042-6267061 | None:intergenic | 60.0% | |
| AACTCGGCAAGCCCACCTTG+GGG | - | chr8_1:6267052-6267071 | None:intergenic | 60.0% | |
| GAACTCGGCAAGCCCACCTT+GGG | - | chr8_1:6267053-6267072 | None:intergenic | 60.0% | |
| TGTGGTGAGTGGGCCCACTT+CGG | + | chr8_1:6267904-6267923 | Msa1175030:CDS | 60.0% | |
| TAGTTTCCTCCGCCCCCTTC+TGG | + | chr8_1:6268199-6268218 | Msa1175030:three_prime_UTR | 60.0% | |
| !! | CTCCGCCCCCTTCTGGAATA+GGG | + | chr8_1:6268206-6268225 | Msa1175030:three_prime_UTR | 60.0% |
| !! | TCCGCCCCCTTCTGGAATAG+GGG | + | chr8_1:6268207-6268226 | Msa1175030:three_prime_UTR | 60.0% |
| TCCCCTATTCCAGAAGGGGG+CGG | - | chr8_1:6268211-6268230 | None:intergenic | 60.0% | |
| ! | GGTTTCTTCGGGGCGTCTCG+AGG | + | chr8_1:6260391-6260410 | Msa1175030:CDS | 65.0% |
| TCTGTGATTGGGCAGGGGGG+CGG | - | chr8_1:6260806-6260825 | None:intergenic | 65.0% | |
| !! | TGCCTGAAGCGGTGGTGGAG+GGG | - | chr8_1:6263963-6263982 | None:intergenic | 65.0% |
| !! | CTGCCTGAAGCGGTGGTGGA+GGG | - | chr8_1:6263964-6263983 | None:intergenic | 65.0% |
| GAAGCTGCCTGAAGCGGTGG+TGG | - | chr8_1:6263968-6263987 | None:intergenic | 65.0% | |
| !! | GGATGTCAGGGCTAGCCCCT+TGG | - | chr8_1:6265717-6265736 | None:intergenic | 65.0% |
| GGAACTCGGCAAGCCCACCT+TGG | - | chr8_1:6267054-6267073 | None:intergenic | 65.0% | |
| CCTATTCCAGAAGGGGGCGG+AGG | - | chr8_1:6268208-6268227 | None:intergenic | 65.0% | |
| !! | CCTCCGCCCCCTTCTGGAAT+AGG | + | chr8_1:6268205-6268224 | Msa1175030:three_prime_UTR | 65.0% |
| TGTGATTGGGCAGGGGGGCG+GGG | - | chr8_1:6260804-6260823 | None:intergenic | 70.0% | |
| CTGTGATTGGGCAGGGGGGC+GGG | - | chr8_1:6260805-6260824 | None:intergenic | 70.0% | |
| TGCCCCTCCACCACCGCTTC+AGG | + | chr8_1:6263958-6263977 | Msa1175030:CDS | 70.0% | |
| ! | GCTGCCTGAAGCGGTGGTGG+AGG | - | chr8_1:6263965-6263984 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 6259934 | 6268544 | 6259934 | ID=Msa1175030;Name=Msa1175030 |
| chr8_1 | mRNA | 6259934 | 6268544 | 6259934 | ID=Msa1175030-mRNA-1;Parent=Msa1175030;Name=Msa1175030-mRNA-1;_AED=0.07;_eAED=0.07;_QI=251|1|1|1|0.93|0.87|16|348|780 |
| chr8_1 | exon | 6259934 | 6260176 | 6259934 | ID=Msa1175030-mRNA-1:exon:2148;Parent=Msa1175030-mRNA-1 |
| chr8_1 | exon | 6260258 | 6260412 | 6260258 | ID=Msa1175030-mRNA-1:exon:2149;Parent=Msa1175030-mRNA-1 |
| chr8_1 | exon | 6261497 | 6261685 | 6261497 | ID=Msa1175030-mRNA-1:exon:2150;Parent=Msa1175030-mRNA-1 |
| chr8_1 | exon | 6262159 | 6262212 | 6262159 | ID=Msa1175030-mRNA-1:exon:2151;Parent=Msa1175030-mRNA-1 |
| chr8_1 | exon | 6262370 | 6262458 | 6262370 | ID=Msa1175030-mRNA-1:exon:2152;Parent=Msa1175030-mRNA-1 |
| chr8_1 | exon | 6262854 | 6263133 | 6262854 | ID=Msa1175030-mRNA-1:exon:2153;Parent=Msa1175030-mRNA-1 |
| chr8_1 | exon | 6263435 | 6263491 | 6263435 | ID=Msa1175030-mRNA-1:exon:2154;Parent=Msa1175030-mRNA-1 |
| chr8_1 | exon | 6263751 | 6263815 | 6263751 | ID=Msa1175030-mRNA-1:exon:2155;Parent=Msa1175030-mRNA-1 |
| chr8_1 | exon | 6263958 | 6264093 | 6263958 | ID=Msa1175030-mRNA-1:exon:2156;Parent=Msa1175030-mRNA-1 |
| chr8_1 | exon | 6264501 | 6264674 | 6264501 | ID=Msa1175030-mRNA-1:exon:2157;Parent=Msa1175030-mRNA-1 |
| chr8_1 | exon | 6265484 | 6266083 | 6265484 | ID=Msa1175030-mRNA-1:exon:2158;Parent=Msa1175030-mRNA-1 |
| chr8_1 | exon | 6266989 | 6267126 | 6266989 | ID=Msa1175030-mRNA-1:exon:2159;Parent=Msa1175030-mRNA-1 |
| chr8_1 | exon | 6267212 | 6267310 | 6267212 | ID=Msa1175030-mRNA-1:exon:2160;Parent=Msa1175030-mRNA-1 |
| chr8_1 | exon | 6267547 | 6267647 | 6267547 | ID=Msa1175030-mRNA-1:exon:2161;Parent=Msa1175030-mRNA-1 |
| chr8_1 | exon | 6267870 | 6267960 | 6267870 | ID=Msa1175030-mRNA-1:exon:2162;Parent=Msa1175030-mRNA-1 |
| chr8_1 | exon | 6268074 | 6268544 | 6268074 | ID=Msa1175030-mRNA-1:exon:2163;Parent=Msa1175030-mRNA-1 |
| chr8_1 | five_prime_UTR | 6259934 | 6260176 | 6259934 | ID=Msa1175030-mRNA-1:five_prime_utr;Parent=Msa1175030-mRNA-1 |
| chr8_1 | five_prime_UTR | 6260258 | 6260265 | 6260258 | ID=Msa1175030-mRNA-1:five_prime_utr;Parent=Msa1175030-mRNA-1 |
| chr8_1 | CDS | 6260266 | 6260412 | 6260266 | ID=Msa1175030-mRNA-1:cds;Parent=Msa1175030-mRNA-1 |
| chr8_1 | CDS | 6261497 | 6261685 | 6261497 | ID=Msa1175030-mRNA-1:cds;Parent=Msa1175030-mRNA-1 |
| chr8_1 | CDS | 6262159 | 6262212 | 6262159 | ID=Msa1175030-mRNA-1:cds;Parent=Msa1175030-mRNA-1 |
| chr8_1 | CDS | 6262370 | 6262458 | 6262370 | ID=Msa1175030-mRNA-1:cds;Parent=Msa1175030-mRNA-1 |
| chr8_1 | CDS | 6262854 | 6263133 | 6262854 | ID=Msa1175030-mRNA-1:cds;Parent=Msa1175030-mRNA-1 |
| chr8_1 | CDS | 6263435 | 6263491 | 6263435 | ID=Msa1175030-mRNA-1:cds;Parent=Msa1175030-mRNA-1 |
| chr8_1 | CDS | 6263751 | 6263815 | 6263751 | ID=Msa1175030-mRNA-1:cds;Parent=Msa1175030-mRNA-1 |
| chr8_1 | CDS | 6263958 | 6264093 | 6263958 | ID=Msa1175030-mRNA-1:cds;Parent=Msa1175030-mRNA-1 |
| chr8_1 | CDS | 6264501 | 6264674 | 6264501 | ID=Msa1175030-mRNA-1:cds;Parent=Msa1175030-mRNA-1 |
| chr8_1 | CDS | 6265484 | 6266083 | 6265484 | ID=Msa1175030-mRNA-1:cds;Parent=Msa1175030-mRNA-1 |
| chr8_1 | CDS | 6266989 | 6267126 | 6266989 | ID=Msa1175030-mRNA-1:cds;Parent=Msa1175030-mRNA-1 |
| chr8_1 | CDS | 6267212 | 6267310 | 6267212 | ID=Msa1175030-mRNA-1:cds;Parent=Msa1175030-mRNA-1 |
| chr8_1 | CDS | 6267547 | 6267647 | 6267547 | ID=Msa1175030-mRNA-1:cds;Parent=Msa1175030-mRNA-1 |
| chr8_1 | CDS | 6267870 | 6267960 | 6267870 | ID=Msa1175030-mRNA-1:cds;Parent=Msa1175030-mRNA-1 |
| chr8_1 | CDS | 6268074 | 6268196 | 6268074 | ID=Msa1175030-mRNA-1:cds;Parent=Msa1175030-mRNA-1 |
| chr8_1 | three_prime_UTR | 6268197 | 6268544 | 6268197 | ID=Msa1175030-mRNA-1:three_prime_utr;Parent=Msa1175030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
