Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1175220 | sp|Q9XF63|ATL3_ARATH | 40.256 | 313 | 143 | 6 | 18 | 307 | 11 | 302 | 2.87e-65 | 211 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1175220 | G7L9W6 | 94.737 | 323 | 15 | 1 | 1 | 323 | 1 | 321 | 0.0 | 561 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0109590 | Msa1175220 | 0.817267 | 3.602480e-52 | -8.615850e-47 |
Msa0685140 | Msa1175220 | 0.802480 | 5.498097e-49 | -8.615850e-47 |
Msa0197660 | Msa1175220 | 0.807519 | 4.858011e-50 | -8.615850e-47 |
Msa0464100 | Msa1175220 | 0.803866 | 2.841934e-49 | -8.615850e-47 |
Msa0239800 | Msa1175220 | 0.807298 | 5.412566e-50 | -8.615850e-47 |
Msa0241470 | Msa1175220 | 0.828305 | 9.680167e-55 | -8.615850e-47 |
Msa0317510 | Msa1175220 | 0.802910 | 4.482552e-49 | -8.615850e-47 |
Msa1175220 | Msa1206360 | 0.804853 | 1.769644e-49 | -8.615850e-47 |
Msa1175220 | Msa1277210 | 0.845171 | 4.796603e-59 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1175220 | MtrunA17_Chr8g0345361 | 95.102 | 245 | 10 | 1 | 1 | 245 | 1 | 243 | 9.97e-161 | 448 |
Msa1175220 | MtrunA17_Chr7g0276591 | 39.357 | 249 | 119 | 5 | 19 | 265 | 12 | 230 | 7.48e-44 | 152 |
Msa1175220 | MtrunA17_Chr4g0067591 | 42.697 | 178 | 75 | 7 | 23 | 182 | 13 | 181 | 1.49e-32 | 122 |
Msa1175220 | MtrunA17_Chr2g0295571 | 37.143 | 175 | 93 | 5 | 21 | 183 | 23 | 192 | 3.00e-31 | 119 |
Msa1175220 | MtrunA17_Chr3g0105441 | 38.150 | 173 | 88 | 4 | 31 | 184 | 26 | 198 | 2.47e-23 | 97.1 |
Msa1175220 | MtrunA17_Chr5g0426781 | 29.808 | 208 | 139 | 5 | 31 | 233 | 63 | 268 | 7.89e-23 | 97.4 |
Msa1175220 | MtrunA17_Chr4g0059281 | 35.385 | 195 | 92 | 8 | 31 | 205 | 48 | 228 | 2.27e-22 | 95.1 |
Msa1175220 | MtrunA17_Chr5g0413841 | 35.507 | 138 | 80 | 4 | 33 | 162 | 49 | 185 | 3.39e-22 | 95.5 |
Msa1175220 | MtrunA17_Chr5g0430781 | 39.860 | 143 | 68 | 3 | 31 | 167 | 28 | 158 | 1.19e-21 | 91.3 |
Msa1175220 | MtrunA17_Chr8g0364881 | 32.639 | 144 | 72 | 4 | 32 | 161 | 4 | 136 | 8.40e-21 | 91.3 |
Msa1175220 | MtrunA17_Chr4g0073141 | 38.793 | 116 | 62 | 3 | 48 | 161 | 78 | 186 | 1.14e-20 | 92.4 |
Msa1175220 | MtrunA17_Chr5g0407431 | 31.288 | 163 | 90 | 3 | 32 | 190 | 33 | 177 | 1.16e-20 | 88.6 |
Msa1175220 | MtrunA17_Chr6g0486651 | 30.631 | 222 | 118 | 7 | 6 | 221 | 21 | 212 | 7.50e-20 | 89.0 |
Msa1175220 | MtrunA17_Chr4g0050041 | 32.584 | 178 | 107 | 4 | 34 | 198 | 58 | 235 | 8.43e-20 | 89.0 |
Msa1175220 | MtrunA17_Chr5g0427431 | 33.333 | 180 | 92 | 5 | 81 | 232 | 121 | 300 | 8.50e-20 | 89.4 |
Msa1175220 | MtrunA17_Chr8g0383861 | 46.835 | 79 | 39 | 2 | 94 | 170 | 113 | 190 | 5.43e-19 | 84.3 |
Msa1175220 | MtrunA17_Chr8g0383881 | 46.835 | 79 | 39 | 2 | 94 | 170 | 103 | 180 | 5.54e-19 | 84.0 |
Msa1175220 | MtrunA17_Chr6g0451161 | 36.957 | 138 | 71 | 5 | 33 | 161 | 71 | 201 | 5.83e-19 | 86.7 |
Msa1175220 | MtrunA17_Chr3g0144241 | 44.737 | 76 | 42 | 0 | 94 | 169 | 79 | 154 | 6.59e-19 | 83.2 |
Msa1175220 | MtrunA17_Chr1g0186661 | 33.824 | 136 | 75 | 4 | 40 | 168 | 53 | 180 | 8.19e-19 | 85.9 |
Msa1175220 | MtrunA17_Chr4g0030831 | 33.548 | 155 | 81 | 7 | 22 | 161 | 7 | 154 | 9.20e-19 | 82.4 |
Msa1175220 | MtrunA17_Chr8g0381731 | 36.792 | 106 | 56 | 2 | 93 | 197 | 147 | 242 | 1.33e-18 | 84.3 |
Msa1175220 | MtrunA17_Chr1g0203541 | 47.297 | 74 | 33 | 1 | 94 | 161 | 105 | 178 | 1.52e-18 | 82.4 |
Msa1175220 | MtrunA17_Chr7g0244851 | 43.158 | 95 | 51 | 2 | 91 | 183 | 78 | 171 | 2.45e-18 | 81.3 |
Msa1175220 | MtrunA17_Chr1g0167811 | 35.461 | 141 | 79 | 5 | 34 | 166 | 34 | 170 | 2.77e-18 | 84.0 |
Msa1175220 | MtrunA17_Chr3g0128771 | 47.222 | 72 | 35 | 1 | 94 | 162 | 91 | 162 | 3.01e-18 | 80.9 |
Msa1175220 | MtrunA17_Chr8g0383941 | 41.935 | 93 | 50 | 3 | 80 | 170 | 94 | 184 | 3.05e-18 | 82.0 |
Msa1175220 | MtrunA17_Chr7g0273051 | 33.333 | 132 | 72 | 5 | 40 | 164 | 44 | 166 | 4.56e-18 | 84.0 |
Msa1175220 | MtrunA17_Chr3g0113811 | 30.573 | 157 | 90 | 6 | 21 | 172 | 17 | 159 | 5.65e-18 | 80.1 |
Msa1175220 | MtrunA17_Chr3g0133001 | 48.000 | 75 | 38 | 1 | 94 | 167 | 130 | 204 | 5.75e-18 | 84.0 |
Msa1175220 | MtrunA17_Chr2g0325161 | 35.669 | 157 | 86 | 3 | 16 | 164 | 19 | 168 | 7.00e-18 | 81.6 |
Msa1175220 | MtrunA17_Chr2g0327791 | 42.308 | 104 | 48 | 3 | 64 | 164 | 86 | 180 | 7.52e-18 | 80.9 |
Msa1175220 | MtrunA17_Chr8g0383871 | 44.304 | 79 | 41 | 2 | 94 | 170 | 112 | 189 | 1.10e-17 | 80.5 |
Msa1175220 | MtrunA17_Chr8g0383921 | 44.304 | 79 | 41 | 2 | 94 | 170 | 111 | 188 | 1.17e-17 | 80.1 |
Msa1175220 | MtrunA17_Chr3g0123641 | 32.000 | 175 | 83 | 5 | 31 | 190 | 1 | 154 | 1.38e-17 | 80.5 |
Msa1175220 | MtrunA17_Chr3g0132491 | 35.915 | 142 | 68 | 7 | 30 | 164 | 57 | 182 | 1.55e-17 | 82.4 |
Msa1175220 | MtrunA17_Chr8g0370171 | 41.250 | 80 | 44 | 1 | 94 | 170 | 70 | 149 | 1.73e-17 | 79.7 |
Msa1175220 | MtrunA17_Chr3g0126931 | 40.230 | 87 | 46 | 2 | 83 | 168 | 95 | 176 | 2.19e-17 | 82.0 |
Msa1175220 | MtrunA17_Chr1g0197031 | 32.836 | 134 | 79 | 3 | 34 | 162 | 18 | 145 | 2.34e-17 | 78.2 |
Msa1175220 | MtrunA17_Chr5g0426881 | 35.252 | 139 | 68 | 5 | 30 | 161 | 62 | 185 | 2.80e-17 | 81.6 |
Msa1175220 | MtrunA17_Chr3g0123631 | 30.688 | 189 | 94 | 6 | 31 | 204 | 1 | 167 | 3.02e-17 | 78.6 |
Msa1175220 | MtrunA17_Chr3g0129671 | 46.154 | 78 | 39 | 2 | 94 | 169 | 109 | 185 | 3.17e-17 | 79.3 |
Msa1175220 | MtrunA17_Chr5g0411081 | 31.387 | 137 | 89 | 3 | 32 | 164 | 58 | 193 | 3.77e-17 | 81.3 |
Msa1175220 | MtrunA17_Chr2g0325141 | 31.655 | 139 | 69 | 4 | 39 | 164 | 11 | 136 | 4.28e-17 | 77.0 |
Msa1175220 | MtrunA17_Chr1g0191601 | 47.368 | 76 | 35 | 2 | 94 | 164 | 98 | 173 | 4.29e-17 | 81.3 |
Msa1175220 | MtrunA17_Chr6g0470751 | 46.914 | 81 | 39 | 2 | 94 | 170 | 97 | 177 | 6.39e-17 | 80.1 |
Msa1175220 | MtrunA17_Chr7g0246761 | 41.463 | 82 | 38 | 2 | 82 | 161 | 59 | 132 | 7.09e-17 | 77.4 |
Msa1175220 | MtrunA17_Chr2g0279431 | 43.038 | 79 | 44 | 1 | 84 | 161 | 125 | 203 | 9.74e-17 | 80.1 |
Msa1175220 | MtrunA17_Chr7g0269491 | 37.143 | 140 | 68 | 5 | 72 | 207 | 47 | 170 | 1.73e-16 | 76.6 |
Msa1175220 | MtrunA17_Chr4g0013561 | 31.973 | 147 | 88 | 5 | 93 | 231 | 84 | 226 | 2.77e-16 | 76.6 |
Msa1175220 | MtrunA17_Chr5g0437361 | 31.858 | 113 | 62 | 2 | 58 | 167 | 51 | 151 | 3.00e-16 | 75.5 |
Msa1175220 | MtrunA17_Chr2g0307411 | 47.059 | 68 | 34 | 1 | 94 | 161 | 77 | 142 | 1.90e-15 | 73.6 |
Msa1175220 | MtrunA17_Chr8g0383901 | 40.244 | 82 | 44 | 2 | 118 | 199 | 130 | 206 | 1.93e-15 | 74.3 |
Msa1175220 | MtrunA17_Chr8g0383931 | 52.830 | 53 | 24 | 1 | 118 | 170 | 140 | 191 | 2.10e-15 | 74.3 |
Msa1175220 | MtrunA17_Chr1g0184171 | 41.892 | 74 | 41 | 1 | 94 | 165 | 103 | 176 | 2.20e-15 | 75.9 |
Msa1175220 | MtrunA17_Chr4g0052671 | 42.105 | 76 | 41 | 1 | 94 | 166 | 78 | 153 | 7.56e-15 | 70.9 |
Msa1175220 | MtrunA17_Chr1g0198201 | 29.412 | 136 | 85 | 3 | 28 | 161 | 4 | 130 | 1.26e-14 | 72.0 |
Msa1175220 | MtrunA17_Chr3g0081611 | 38.961 | 77 | 44 | 1 | 89 | 162 | 75 | 151 | 1.38e-14 | 70.9 |
Msa1175220 | MtrunA17_Chr5g0409211 | 59.574 | 47 | 19 | 0 | 115 | 161 | 90 | 136 | 1.64e-14 | 70.5 |
Msa1175220 | MtrunA17_Chr6g0451051 | 28.859 | 149 | 80 | 3 | 33 | 180 | 4 | 127 | 1.81e-14 | 70.1 |
Msa1175220 | MtrunA17_Chr3g0143301 | 45.333 | 75 | 39 | 1 | 94 | 168 | 48 | 120 | 2.42e-14 | 68.9 |
Msa1175220 | MtrunA17_Chr5g0426871 | 44.444 | 72 | 36 | 2 | 94 | 161 | 108 | 179 | 2.55e-14 | 73.2 |
Msa1175220 | MtrunA17_Chr8g0366561 | 46.667 | 75 | 37 | 2 | 93 | 164 | 113 | 187 | 3.45e-14 | 72.4 |
Msa1175220 | MtrunA17_Chr1g0157091 | 40.244 | 82 | 47 | 1 | 94 | 175 | 48 | 127 | 6.13e-14 | 67.8 |
Msa1175220 | MtrunA17_Chr8g0366521 | 38.710 | 93 | 45 | 3 | 94 | 179 | 76 | 163 | 6.83e-14 | 71.2 |
Msa1175220 | MtrunA17_Chr7g0274741 | 38.667 | 75 | 38 | 2 | 94 | 162 | 70 | 142 | 6.97e-14 | 68.9 |
Msa1175220 | MtrunA17_Chr8g0350741 | 42.647 | 68 | 37 | 1 | 96 | 161 | 64 | 131 | 8.08e-14 | 68.9 |
Msa1175220 | MtrunA17_Chr2g0297011 | 42.466 | 73 | 39 | 2 | 94 | 164 | 76 | 147 | 8.94e-14 | 68.2 |
Msa1175220 | MtrunA17_Chr1g0197021 | 27.660 | 141 | 95 | 1 | 23 | 163 | 10 | 143 | 9.29e-14 | 68.2 |
Msa1175220 | MtrunA17_Chr5g0409201 | 56.250 | 48 | 21 | 0 | 115 | 162 | 89 | 136 | 9.85e-14 | 68.2 |
Msa1175220 | MtrunA17_Chr4g0027761 | 41.096 | 73 | 41 | 2 | 94 | 166 | 100 | 170 | 1.56e-13 | 68.2 |
Msa1175220 | MtrunA17_Chr6g0451031 | 36.250 | 80 | 51 | 0 | 100 | 179 | 50 | 129 | 2.90e-13 | 65.9 |
Msa1175220 | MtrunA17_Chr8g0345401 | 51.064 | 47 | 23 | 0 | 119 | 165 | 49 | 95 | 8.83e-13 | 65.1 |
Msa1175220 | MtrunA17_Chr7g0248841 | 35.897 | 78 | 41 | 2 | 94 | 164 | 74 | 149 | 9.20e-13 | 65.5 |
Msa1175220 | MtrunA17_Chr7g0261091 | 29.452 | 146 | 78 | 7 | 31 | 165 | 15 | 146 | 1.04e-12 | 67.8 |
Msa1175220 | MtrunA17_Chr5g0433861 | 29.221 | 154 | 87 | 6 | 31 | 179 | 27 | 163 | 1.39e-12 | 67.4 |
Msa1175220 | MtrunA17_Chr7g0248831 | 35.616 | 73 | 44 | 1 | 93 | 162 | 79 | 151 | 1.54e-12 | 65.1 |
Msa1175220 | MtrunA17_Chr7g0274711 | 38.356 | 73 | 41 | 2 | 94 | 162 | 67 | 139 | 1.72e-12 | 65.1 |
Msa1175220 | MtrunA17_Chr8g0345381 | 48.148 | 54 | 28 | 0 | 119 | 172 | 53 | 106 | 1.73e-12 | 64.3 |
Msa1175220 | MtrunA17_Chr8g0369571 | 46.875 | 64 | 30 | 1 | 119 | 178 | 90 | 153 | 1.82e-12 | 65.1 |
Msa1175220 | MtrunA17_Chr3g0118061 | 36.000 | 75 | 45 | 1 | 91 | 162 | 73 | 147 | 2.34e-12 | 65.5 |
Msa1175220 | MtrunA17_Chr1g0184631 | 37.838 | 74 | 40 | 2 | 94 | 162 | 68 | 140 | 2.99e-12 | 64.3 |
Msa1175220 | MtrunA17_Chr8g0348151 | 28.261 | 138 | 93 | 3 | 29 | 162 | 22 | 157 | 3.44e-12 | 64.7 |
Msa1175220 | MtrunA17_Chr5g0406031 | 57.778 | 45 | 19 | 0 | 117 | 161 | 187 | 231 | 3.65e-12 | 65.1 |
Msa1175220 | MtrunA17_Chr7g0274721 | 36.765 | 68 | 43 | 0 | 94 | 161 | 68 | 135 | 3.85e-12 | 63.9 |
Msa1175220 | MtrunA17_Chr8g0388201 | 51.111 | 45 | 22 | 0 | 119 | 163 | 347 | 391 | 4.67e-12 | 66.2 |
Msa1175220 | MtrunA17_Chr2g0300331 | 61.364 | 44 | 17 | 0 | 118 | 161 | 168 | 211 | 4.85e-12 | 64.7 |
Msa1175220 | MtrunA17_Chr7g0237871 | 45.902 | 61 | 31 | 1 | 107 | 165 | 144 | 204 | 5.84e-12 | 64.7 |
Msa1175220 | MtrunA17_Chr3g0120011 | 44.444 | 72 | 36 | 3 | 92 | 161 | 92 | 161 | 9.87e-12 | 63.5 |
Msa1175220 | MtrunA17_Chr3g0118071 | 36.000 | 75 | 45 | 1 | 91 | 162 | 73 | 147 | 1.24e-11 | 63.5 |
Msa1175220 | MtrunA17_Chr4g0060981 | 42.857 | 70 | 38 | 2 | 94 | 162 | 149 | 217 | 1.24e-11 | 63.5 |
Msa1175220 | MtrunA17_Chr4g0010171 | 52.000 | 50 | 24 | 0 | 116 | 165 | 110 | 159 | 1.94e-11 | 62.4 |
Msa1175220 | MtrunA17_Chr1g0200721 | 42.254 | 71 | 37 | 3 | 94 | 161 | 208 | 277 | 3.04e-11 | 63.9 |
Msa1175220 | MtrunA17_Chr5g0396611 | 53.333 | 45 | 21 | 0 | 119 | 163 | 340 | 384 | 3.72e-11 | 63.5 |
Msa1175220 | MtrunA17_Chr5g0396601 | 53.333 | 45 | 21 | 0 | 119 | 163 | 350 | 394 | 5.47e-11 | 63.2 |
Msa1175220 | MtrunA17_Chr3g0124531 | 40.506 | 79 | 43 | 3 | 118 | 195 | 68 | 143 | 5.53e-11 | 60.1 |
Msa1175220 | MtrunA17_Chr2g0301871 | 53.191 | 47 | 22 | 0 | 118 | 164 | 82 | 128 | 6.15e-11 | 62.4 |
Msa1175220 | MtrunA17_Chr8g0343571 | 38.095 | 105 | 58 | 5 | 100 | 198 | 62 | 165 | 6.47e-11 | 60.5 |
Msa1175220 | MtrunA17_Chr7g0274731 | 35.294 | 68 | 44 | 0 | 94 | 161 | 89 | 156 | 7.85e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1175220 | AT1G72310.1 | 40.256 | 313 | 143 | 6 | 18 | 307 | 11 | 302 | 2.92e-66 | 211 |
Msa1175220 | AT1G53820.1 | 45.545 | 303 | 126 | 10 | 26 | 306 | 19 | 304 | 3.22e-66 | 211 |
Msa1175220 | AT3G16720.1 | 36.364 | 297 | 141 | 12 | 22 | 313 | 21 | 274 | 6.19e-40 | 142 |
Msa1175220 | AT3G62690.1 | 36.667 | 150 | 90 | 2 | 16 | 164 | 13 | 158 | 2.05e-25 | 102 |
Msa1175220 | AT4G15975.1 | 42.241 | 116 | 55 | 3 | 49 | 164 | 18 | 121 | 8.37e-24 | 97.8 |
Msa1175220 | AT1G23980.1 | 36.296 | 135 | 81 | 3 | 32 | 161 | 52 | 186 | 4.48e-23 | 98.6 |
Msa1175220 | AT5G05280.1 | 35.366 | 164 | 89 | 4 | 1 | 161 | 6 | 155 | 1.08e-22 | 93.6 |
Msa1175220 | AT5G17600.1 | 33.939 | 165 | 101 | 4 | 34 | 197 | 59 | 216 | 1.45e-22 | 97.1 |
Msa1175220 | AT3G14320.1 | 47.368 | 76 | 40 | 0 | 92 | 167 | 61 | 136 | 2.23e-22 | 93.2 |
Msa1175220 | AT1G49220.1 | 47.170 | 106 | 45 | 4 | 72 | 170 | 84 | 185 | 2.90e-22 | 94.4 |
Msa1175220 | AT2G47560.1 | 36.842 | 152 | 82 | 3 | 16 | 164 | 13 | 153 | 7.87e-22 | 92.4 |
Msa1175220 | AT2G20030.1 | 39.437 | 142 | 72 | 4 | 27 | 167 | 44 | 172 | 5.09e-21 | 93.2 |
Msa1175220 | AT2G42360.1 | 34.932 | 146 | 80 | 2 | 21 | 164 | 21 | 153 | 5.30e-21 | 90.5 |
Msa1175220 | AT1G04360.1 | 35.570 | 149 | 71 | 6 | 31 | 168 | 49 | 183 | 6.05e-21 | 92.8 |
Msa1175220 | AT3G18773.1 | 41.584 | 101 | 56 | 2 | 94 | 192 | 103 | 202 | 2.59e-20 | 88.2 |
Msa1175220 | AT3G48030.2 | 33.108 | 148 | 95 | 2 | 31 | 176 | 41 | 186 | 2.95e-20 | 89.0 |
Msa1175220 | AT1G20823.1 | 33.766 | 154 | 85 | 5 | 21 | 169 | 20 | 161 | 4.78e-20 | 86.7 |
Msa1175220 | AT1G49210.1 | 50.633 | 79 | 36 | 2 | 94 | 170 | 108 | 185 | 5.59e-20 | 87.4 |
Msa1175220 | AT4G40070.1 | 35.714 | 154 | 80 | 6 | 28 | 175 | 40 | 180 | 5.68e-20 | 89.4 |
Msa1175220 | AT3G48030.1 | 33.108 | 148 | 95 | 2 | 31 | 176 | 119 | 264 | 5.80e-20 | 89.4 |
Msa1175220 | AT1G49200.1 | 48.810 | 84 | 40 | 2 | 89 | 170 | 104 | 186 | 7.33e-20 | 87.0 |
Msa1175220 | AT5G43420.1 | 31.841 | 201 | 108 | 7 | 20 | 201 | 31 | 221 | 2.67e-19 | 87.8 |
Msa1175220 | AT5G05810.1 | 52.000 | 75 | 35 | 1 | 94 | 167 | 120 | 194 | 3.07e-19 | 88.2 |
Msa1175220 | AT1G76410.1 | 33.571 | 140 | 78 | 4 | 32 | 169 | 28 | 154 | 3.95e-19 | 84.0 |
Msa1175220 | AT3G10910.1 | 44.565 | 92 | 48 | 2 | 94 | 183 | 88 | 178 | 3.96e-19 | 84.0 |
Msa1175220 | AT4G28890.1 | 44.792 | 96 | 50 | 2 | 94 | 188 | 97 | 190 | 8.26e-19 | 87.0 |
Msa1175220 | AT1G72200.1 | 28.910 | 211 | 120 | 5 | 2 | 195 | 36 | 233 | 1.03e-18 | 86.7 |
Msa1175220 | AT4G30400.1 | 42.157 | 102 | 52 | 3 | 65 | 161 | 77 | 176 | 1.37e-18 | 86.7 |
Msa1175220 | AT2G35000.1 | 30.882 | 204 | 119 | 8 | 32 | 224 | 51 | 243 | 1.91e-18 | 85.5 |
Msa1175220 | AT5G40250.1 | 34.014 | 147 | 73 | 4 | 33 | 161 | 45 | 185 | 2.44e-18 | 85.1 |
Msa1175220 | AT5G10380.1 | 52.857 | 70 | 32 | 1 | 93 | 161 | 108 | 177 | 7.95e-18 | 82.8 |
Msa1175220 | AT4G10150.1 | 30.769 | 130 | 88 | 1 | 32 | 161 | 26 | 153 | 8.07e-18 | 81.6 |
Msa1175220 | AT3G03550.1 | 38.182 | 110 | 55 | 2 | 95 | 191 | 134 | 243 | 9.68e-18 | 83.2 |
Msa1175220 | AT2G18650.1 | 45.977 | 87 | 44 | 3 | 82 | 165 | 87 | 173 | 1.50e-17 | 83.2 |
Msa1175220 | AT5G01880.1 | 45.833 | 72 | 38 | 1 | 92 | 162 | 77 | 148 | 2.04e-17 | 78.6 |
Msa1175220 | AT3G19140.1 | 41.176 | 85 | 44 | 1 | 83 | 161 | 37 | 121 | 2.14e-17 | 78.2 |
Msa1175220 | AT3G05200.1 | 37.500 | 104 | 56 | 3 | 94 | 188 | 99 | 202 | 2.78e-17 | 82.4 |
Msa1175220 | AT2G27940.1 | 31.343 | 134 | 89 | 1 | 32 | 162 | 50 | 183 | 5.32e-17 | 79.3 |
Msa1175220 | AT1G33480.1 | 40.698 | 86 | 48 | 1 | 76 | 161 | 60 | 142 | 6.69e-17 | 79.7 |
Msa1175220 | AT4G33565.1 | 36.792 | 106 | 66 | 1 | 84 | 188 | 181 | 286 | 8.72e-17 | 80.5 |
Msa1175220 | AT4G10160.1 | 36.842 | 114 | 61 | 4 | 92 | 204 | 70 | 173 | 9.96e-17 | 78.2 |
Msa1175220 | AT5G42200.1 | 31.544 | 149 | 80 | 4 | 19 | 161 | 14 | 146 | 1.01e-16 | 76.6 |
Msa1175220 | AT2G17450.1 | 40.777 | 103 | 48 | 3 | 75 | 169 | 55 | 152 | 1.23e-16 | 77.0 |
Msa1175220 | AT4G09110.1 | 32.374 | 139 | 72 | 3 | 33 | 167 | 51 | 171 | 1.63e-16 | 79.0 |
Msa1175220 | AT4G17905.1 | 44.186 | 86 | 45 | 2 | 84 | 166 | 117 | 202 | 2.06e-16 | 79.0 |
Msa1175220 | AT1G72220.1 | 29.861 | 144 | 94 | 3 | 25 | 166 | 86 | 224 | 2.09e-16 | 79.7 |
Msa1175220 | AT4G17905.2 | 44.186 | 86 | 45 | 2 | 84 | 166 | 143 | 228 | 2.42e-16 | 79.0 |
Msa1175220 | AT4G09120.1 | 38.144 | 97 | 55 | 2 | 75 | 167 | 76 | 171 | 2.55e-16 | 79.0 |
Msa1175220 | AT1G49230.1 | 40.659 | 91 | 51 | 2 | 94 | 182 | 104 | 193 | 2.92e-16 | 77.0 |
Msa1175220 | AT2G42350.1 | 30.496 | 141 | 82 | 1 | 21 | 161 | 18 | 142 | 3.76e-16 | 76.6 |
Msa1175220 | AT5G27420.1 | 41.463 | 82 | 44 | 2 | 94 | 171 | 95 | 176 | 5.80e-16 | 78.2 |
Msa1175220 | AT1G32361.1 | 36.364 | 99 | 56 | 3 | 69 | 167 | 111 | 202 | 7.02e-16 | 77.8 |
Msa1175220 | AT5G57750.1 | 30.464 | 151 | 86 | 5 | 21 | 162 | 25 | 165 | 8.49e-16 | 75.5 |
Msa1175220 | AT2G34990.2 | 43.056 | 72 | 37 | 1 | 94 | 161 | 89 | 160 | 9.32e-16 | 77.0 |
Msa1175220 | AT2G34990.1 | 43.056 | 72 | 37 | 1 | 94 | 161 | 67 | 138 | 1.17e-15 | 76.6 |
Msa1175220 | AT4G09130.1 | 37.363 | 91 | 53 | 2 | 82 | 168 | 79 | 169 | 1.73e-15 | 76.6 |
Msa1175220 | AT1G74410.1 | 42.500 | 80 | 44 | 2 | 87 | 164 | 142 | 221 | 2.01e-15 | 74.7 |
Msa1175220 | AT2G35420.1 | 32.031 | 128 | 77 | 4 | 37 | 161 | 25 | 145 | 3.53e-15 | 74.7 |
Msa1175220 | AT5G07040.1 | 39.189 | 74 | 42 | 1 | 92 | 162 | 64 | 137 | 3.56e-15 | 72.4 |
Msa1175220 | AT4G17920.1 | 39.394 | 99 | 55 | 2 | 94 | 188 | 81 | 178 | 5.99e-15 | 74.3 |
Msa1175220 | AT3G18930.2 | 36.559 | 93 | 47 | 2 | 84 | 164 | 109 | 201 | 1.36e-14 | 74.3 |
Msa1175220 | AT3G18930.3 | 36.559 | 93 | 47 | 2 | 84 | 164 | 109 | 201 | 1.36e-14 | 74.3 |
Msa1175220 | AT3G18930.1 | 36.559 | 93 | 47 | 2 | 84 | 164 | 109 | 201 | 1.36e-14 | 74.3 |
Msa1175220 | AT1G22500.1 | 40.217 | 92 | 50 | 2 | 80 | 166 | 75 | 166 | 1.66e-14 | 73.9 |
Msa1175220 | AT4G09100.1 | 44.000 | 75 | 38 | 1 | 94 | 164 | 56 | 130 | 3.69e-14 | 68.9 |
Msa1175220 | AT5G58580.1 | 39.286 | 112 | 60 | 3 | 94 | 197 | 111 | 222 | 3.81e-14 | 72.4 |
Msa1175220 | AT5G46650.1 | 34.507 | 142 | 72 | 7 | 32 | 161 | 25 | 157 | 4.20e-14 | 72.0 |
Msa1175220 | AT1G35330.1 | 41.667 | 72 | 38 | 1 | 94 | 161 | 100 | 171 | 1.12e-13 | 71.2 |
Msa1175220 | AT3G61550.1 | 31.034 | 116 | 60 | 4 | 60 | 162 | 71 | 179 | 4.55e-13 | 67.8 |
Msa1175220 | AT4G24015.1 | 40.449 | 89 | 49 | 3 | 93 | 179 | 79 | 165 | 8.92e-13 | 66.2 |
Msa1175220 | AT3G60220.1 | 38.372 | 86 | 46 | 2 | 84 | 162 | 75 | 160 | 1.18e-12 | 68.2 |
Msa1175220 | AT2G46493.1 | 45.833 | 48 | 26 | 0 | 115 | 162 | 134 | 181 | 1.67e-12 | 65.5 |
Msa1175220 | AT3G11110.1 | 30.000 | 150 | 88 | 3 | 21 | 168 | 22 | 156 | 1.97e-12 | 64.7 |
Msa1175220 | AT2G46160.1 | 30.612 | 98 | 57 | 2 | 76 | 162 | 84 | 181 | 2.42e-12 | 65.9 |
Msa1175220 | AT2G46160.2 | 30.612 | 98 | 57 | 2 | 76 | 162 | 84 | 181 | 2.42e-12 | 65.9 |
Msa1175220 | AT4G35480.1 | 44.828 | 58 | 32 | 0 | 112 | 169 | 106 | 163 | 2.52e-12 | 65.5 |
Msa1175220 | AT5G06490.1 | 34.615 | 78 | 43 | 1 | 93 | 162 | 95 | 172 | 3.00e-12 | 65.1 |
Msa1175220 | AT1G71980.1 | 36.782 | 87 | 51 | 3 | 94 | 177 | 205 | 290 | 3.53e-12 | 67.4 |
Msa1175220 | AT2G44578.1 | 58.140 | 43 | 18 | 0 | 119 | 161 | 70 | 112 | 6.46e-12 | 63.2 |
Msa1175220 | AT2G46494.1 | 47.917 | 48 | 25 | 0 | 115 | 162 | 312 | 359 | 7.75e-12 | 65.9 |
Msa1175220 | AT5G66070.5 | 54.348 | 46 | 21 | 0 | 117 | 162 | 174 | 219 | 7.82e-12 | 64.3 |
Msa1175220 | AT5G66070.1 | 54.348 | 46 | 21 | 0 | 117 | 162 | 174 | 219 | 7.82e-12 | 64.3 |
Msa1175220 | AT5G53110.1 | 36.735 | 98 | 54 | 3 | 73 | 162 | 276 | 373 | 8.28e-12 | 65.9 |
Msa1175220 | AT2G17730.1 | 40.278 | 72 | 39 | 1 | 94 | 161 | 167 | 238 | 1.22e-11 | 64.3 |
Msa1175220 | AT5G66070.2 | 55.556 | 45 | 20 | 0 | 117 | 161 | 198 | 242 | 1.29e-11 | 64.3 |
Msa1175220 | AT2G34000.1 | 33.333 | 99 | 58 | 2 | 73 | 163 | 37 | 135 | 1.49e-11 | 62.0 |
Msa1175220 | AT5G47610.1 | 41.270 | 63 | 35 | 1 | 104 | 164 | 90 | 152 | 2.10e-11 | 62.0 |
Msa1175220 | AT1G28040.1 | 45.833 | 48 | 26 | 0 | 115 | 162 | 249 | 296 | 2.21e-11 | 63.9 |
Msa1175220 | AT3G60966.1 | 60.465 | 43 | 17 | 0 | 119 | 161 | 62 | 104 | 7.53e-11 | 59.7 |
Msa1175220 | AT2G44581.1 | 53.488 | 43 | 20 | 0 | 119 | 161 | 70 | 112 | 8.13e-11 | 59.7 |
Msa1175220 | AT2G46495.1 | 45.833 | 48 | 26 | 0 | 115 | 162 | 316 | 363 | 8.51e-11 | 62.8 |
Msa1175220 | AT2G46495.2 | 45.833 | 48 | 26 | 0 | 115 | 162 | 288 | 335 | 8.85e-11 | 62.8 |
Msa1175220 | AT1G22670.1 | 36.047 | 86 | 51 | 3 | 94 | 176 | 205 | 289 | 9.39e-11 | 62.8 |
Msa1175220 | AT3G20395.1 | 36.111 | 72 | 45 | 1 | 94 | 165 | 147 | 217 | 9.43e-11 | 61.2 |
Find 54 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTCAAGATCCTGTTGTTTA+TGG | 0.168039 | 8_1:-6509658 | Msa1175220:CDS |
CCATTTGAATCAGTACTATT+TGG | 0.192512 | 8_1:+6509391 | None:intergenic |
TCTTAAGTCTTTGCCTGTTT+TGG | 0.218884 | 8_1:-6509605 | Msa1175220:CDS |
TGAAACCCATGATTGCATTT+TGG | 0.226368 | 8_1:+6509496 | None:intergenic |
CGTCGACGACGGCGGTTTCT+TGG | 0.237232 | 8_1:+6509700 | None:intergenic |
ATTCTACTTGTCCTCTTTGT+AGG | 0.257676 | 8_1:-6509441 | Msa1175220:CDS |
ATTTATATGCAAAGTGGTTT+TGG | 0.278266 | 8_1:-6509753 | Msa1175220:CDS |
CATTGTCACCTTCTGATAAT+AGG | 0.288696 | 8_1:-6509081 | Msa1175220:CDS |
TCCTTCAACTCCAAGTTCTA+TGG | 0.291895 | 8_1:-6508975 | Msa1175220:CDS |
AAATTTCCCTACAAATGTTT+TGG | 0.305638 | 8_1:-6509299 | Msa1175220:CDS |
GTTTATGGAAGTCACCAAAT+TGG | 0.322819 | 8_1:-6509643 | Msa1175220:CDS |
ACACAAGTTAGTTCTTCTTT+TGG | 0.347982 | 8_1:-6509259 | Msa1175220:CDS |
TGAGGATTTCAAAGATGGTT+TGG | 0.348325 | 8_1:-6509572 | Msa1175220:CDS |
AAAGGGTCAGGTGATGTATT+AGG | 0.362982 | 8_1:-6509865 | Msa1175220:CDS |
AGTAATAGATGTAATGGAAA+TGG | 0.371817 | 8_1:-6509151 | Msa1175220:CDS |
TCATCATCATCATCTACTTT+AGG | 0.382831 | 8_1:-6509190 | Msa1175220:CDS |
GCAACTGCAACTGCAACAAA+AGG | 0.394252 | 8_1:-6509883 | Msa1175220:CDS |
CCCCAAACCAAAACATTTGT+AGG | 0.395435 | 8_1:+6509292 | None:intergenic |
AAGAATGAGGATTTCAAAGA+TGG | 0.398458 | 8_1:-6509577 | Msa1175220:CDS |
TCTAATACAGTTGAAATAAC+AGG | 0.400393 | 8_1:-6509838 | Msa1175220:CDS |
CAAGATTGAGGTCATTTAAG+AGG | 0.400414 | 8_1:-6509024 | Msa1175220:CDS |
TCTACTTTAGGTAGTGATAA+TGG | 0.408867 | 8_1:-6509178 | Msa1175220:CDS |
GGTAATAGTAATAGATGTAA+TGG | 0.421867 | 8_1:-6509157 | Msa1175220:CDS |
TGTCTTTGTGATGTTGTTGA+AGG | 0.438454 | 8_1:-6509538 | Msa1175220:CDS |
TCATTCTTGAAAACCAAAAC+AGG | 0.442504 | 8_1:+6509592 | None:intergenic |
TCCATAGAACTTGGAGTTGA+AGG | 0.444903 | 8_1:+6508974 | None:intergenic |
ATTTAGATTGTATTGATATG+TGG | 0.449698 | 8_1:-6509474 | Msa1175220:CDS |
TGGTGACTTCCATAAACAAC+AGG | 0.454316 | 8_1:+6509649 | None:intergenic |
CGACGGCGGTTTCTTGGTTG+AGG | 0.455007 | 8_1:+6509706 | None:intergenic |
GACCTCAATCTTGTTGTCAT+TGG | 0.460150 | 8_1:+6509034 | None:intergenic |
TTAGAAGTCACTACTAGCTC+TGG | 0.474659 | 8_1:+6508939 | None:intergenic |
TGTTCCACATCCATAGAACT+TGG | 0.475183 | 8_1:+6508965 | None:intergenic |
AACTCCAAGTTCTATGGATG+TGG | 0.479911 | 8_1:-6508969 | Msa1175220:CDS |
GAACTAAATTCACTTGGTAA+TGG | 0.506647 | 8_1:+6509109 | None:intergenic |
CCAAATAGTACTGATTCAAA+TGG | 0.506743 | 8_1:-6509391 | Msa1175220:CDS |
GAAAATTTGAGTCATGTGAA+TGG | 0.511787 | 8_1:-6509334 | Msa1175220:CDS |
AAACAAACCGCCGTCGACGA+CGG | 0.534947 | 8_1:+6509689 | None:intergenic |
CCCAAACCAAAACATTTGTA+GGG | 0.536138 | 8_1:+6509293 | None:intergenic |
TGCTTCATTTATATGCAAAG+TGG | 0.539115 | 8_1:-6509759 | Msa1175220:CDS |
GCAACTGCAACAAAAGGGTC+AGG | 0.546145 | 8_1:-6509877 | Msa1175220:CDS |
CAACTGCAACTGCAACAAAA+GGG | 0.548726 | 8_1:-6509882 | Msa1175220:CDS |
CACCAATGACAACAAGATTG+AGG | 0.562761 | 8_1:-6509036 | Msa1175220:CDS |
GAAACTAAATTCCTACAAAG+AGG | 0.564972 | 8_1:+6509430 | None:intergenic |
CAAGAAACCGCCGTCGTCGA+CGG | 0.576823 | 8_1:-6509699 | Msa1175220:CDS |
AGTTCTATGGATGTGGAACA+AGG | 0.581073 | 8_1:-6508962 | Msa1175220:CDS |
ATGTAATGGAAATGGAATGT+TGG | 0.589041 | 8_1:-6509143 | Msa1175220:CDS |
GAGGAAGAACTAAATTCACT+TGG | 0.635097 | 8_1:+6509103 | None:intergenic |
TCAACACACCTATTATCAGA+AGG | 0.647870 | 8_1:+6509073 | None:intergenic |
AATGTGTTAGTCTCATCAGA+AGG | 0.648849 | 8_1:-6509358 | Msa1175220:CDS |
CAAACCGCCGTCGACGACGG+CGG | 0.650391 | 8_1:+6509692 | None:intergenic |
GAAACCGCCGTCGTCGACGG+CGG | 0.652134 | 8_1:-6509696 | Msa1175220:CDS |
ATTATCAGAAGGTGACAATG+AGG | 0.655023 | 8_1:+6509084 | None:intergenic |
TAAACAACAGGATCTTGACC+AGG | 0.667684 | 8_1:+6509661 | None:intergenic |
GATGATGATGATGCTGAACA+AGG | 0.671827 | 8_1:+6509202 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGAAATAACAGGAAAAATTA+TGG | - | chr8_1:6509026-6509045 | Msa1175220:CDS | 20.0% |
!!! | AGCAATAATTTTTCTATTCA+TGG | - | chr8_1:6509053-6509072 | Msa1175220:CDS | 20.0% |
!!! | ATTTAGATTGTATTGATATG+TGG | - | chr8_1:6509379-6509398 | Msa1175220:CDS | 20.0% |
!! | TGAAATAACAGGAAAAATTA+TGG | - | chr8_1:6509026-6509045 | Msa1175220:CDS | 20.0% |
!!! | AGCAATAATTTTTCTATTCA+TGG | - | chr8_1:6509053-6509072 | Msa1175220:CDS | 20.0% |
!!! | ATTTAGATTGTATTGATATG+TGG | - | chr8_1:6509379-6509398 | Msa1175220:CDS | 20.0% |
! | TCTAATACAGTTGAAATAAC+AGG | - | chr8_1:6509015-6509034 | Msa1175220:CDS | 25.0% |
!! | ATTTATATGCAAAGTGGTTT+TGG | - | chr8_1:6509100-6509119 | Msa1175220:CDS | 25.0% |
!! | TTTTACCAAAATGCAATCAT+GGG | - | chr8_1:6509352-6509371 | Msa1175220:CDS | 25.0% |
!! | AAATTTCCCTACAAATGTTT+TGG | - | chr8_1:6509554-6509573 | Msa1175220:CDS | 25.0% |
! | GGTAATAGTAATAGATGTAA+TGG | - | chr8_1:6509696-6509715 | Msa1175220:CDS | 25.0% |
!! | AGTAATAGATGTAATGGAAA+TGG | - | chr8_1:6509702-6509721 | Msa1175220:CDS | 25.0% |
! | TCTAATACAGTTGAAATAAC+AGG | - | chr8_1:6509015-6509034 | Msa1175220:CDS | 25.0% |
!! | ATTTATATGCAAAGTGGTTT+TGG | - | chr8_1:6509100-6509119 | Msa1175220:CDS | 25.0% |
!! | TTTTACCAAAATGCAATCAT+GGG | - | chr8_1:6509352-6509371 | Msa1175220:CDS | 25.0% |
!! | AAATTTCCCTACAAATGTTT+TGG | - | chr8_1:6509554-6509573 | Msa1175220:CDS | 25.0% |
! | GGTAATAGTAATAGATGTAA+TGG | - | chr8_1:6509696-6509715 | Msa1175220:CDS | 25.0% |
!! | AGTAATAGATGTAATGGAAA+TGG | - | chr8_1:6509702-6509721 | Msa1175220:CDS | 25.0% |
TGCTTCATTTATATGCAAAG+TGG | - | chr8_1:6509094-6509113 | Msa1175220:CDS | 30.0% | |
!!! | TTTTAGCTTCAAGTCCAATT+TGG | + | chr8_1:6509227-6509246 | None:intergenic | 30.0% |
TCATTCTTGAAAACCAAAAC+AGG | + | chr8_1:6509264-6509283 | None:intergenic | 30.0% | |
!!! | TGTTTTGGTTTTCAAGAATG+AGG | - | chr8_1:6509263-6509282 | Msa1175220:CDS | 30.0% |
AAGAATGAGGATTTCAAAGA+TGG | - | chr8_1:6509276-6509295 | Msa1175220:CDS | 30.0% | |
TTGTTGAAGGAGAAAAAACT+AGG | - | chr8_1:6509328-6509347 | Msa1175220:CDS | 30.0% | |
! | CTTTTACCAAAATGCAATCA+TGG | - | chr8_1:6509351-6509370 | Msa1175220:CDS | 30.0% |
GAAACTAAATTCCTACAAAG+AGG | + | chr8_1:6509426-6509445 | None:intergenic | 30.0% | |
CCATTTGAATCAGTACTATT+TGG | + | chr8_1:6509465-6509484 | None:intergenic | 30.0% | |
!! | CCAAATAGTACTGATTCAAA+TGG | - | chr8_1:6509462-6509481 | Msa1175220:CDS | 30.0% |
GAAAATTTGAGTCATGTGAA+TGG | - | chr8_1:6509519-6509538 | Msa1175220:CDS | 30.0% | |
!! | ACACAAGTTAGTTCTTCTTT+TGG | - | chr8_1:6509594-6509613 | Msa1175220:CDS | 30.0% |
!!! | TTCTTCTTTTGGTGTTTCTT+TGG | - | chr8_1:6509605-6509624 | Msa1175220:CDS | 30.0% |
TCATCATCATCATCTACTTT+AGG | - | chr8_1:6509663-6509682 | Msa1175220:CDS | 30.0% | |
TCTACTTTAGGTAGTGATAA+TGG | - | chr8_1:6509675-6509694 | Msa1175220:CDS | 30.0% | |
! | ATGTAATGGAAATGGAATGT+TGG | - | chr8_1:6509710-6509729 | Msa1175220:CDS | 30.0% |
GAACTAAATTCACTTGGTAA+TGG | + | chr8_1:6509747-6509766 | None:intergenic | 30.0% | |
TGCTTCATTTATATGCAAAG+TGG | - | chr8_1:6509094-6509113 | Msa1175220:CDS | 30.0% | |
!!! | TTTTAGCTTCAAGTCCAATT+TGG | + | chr8_1:6509227-6509246 | None:intergenic | 30.0% |
TCATTCTTGAAAACCAAAAC+AGG | + | chr8_1:6509264-6509283 | None:intergenic | 30.0% | |
!!! | TGTTTTGGTTTTCAAGAATG+AGG | - | chr8_1:6509263-6509282 | Msa1175220:CDS | 30.0% |
AAGAATGAGGATTTCAAAGA+TGG | - | chr8_1:6509276-6509295 | Msa1175220:CDS | 30.0% | |
TTGTTGAAGGAGAAAAAACT+AGG | - | chr8_1:6509328-6509347 | Msa1175220:CDS | 30.0% | |
! | CTTTTACCAAAATGCAATCA+TGG | - | chr8_1:6509351-6509370 | Msa1175220:CDS | 30.0% |
GAAACTAAATTCCTACAAAG+AGG | + | chr8_1:6509426-6509445 | None:intergenic | 30.0% | |
CCATTTGAATCAGTACTATT+TGG | + | chr8_1:6509465-6509484 | None:intergenic | 30.0% | |
!! | CCAAATAGTACTGATTCAAA+TGG | - | chr8_1:6509462-6509481 | Msa1175220:CDS | 30.0% |
GAAAATTTGAGTCATGTGAA+TGG | - | chr8_1:6509519-6509538 | Msa1175220:CDS | 30.0% | |
!! | ACACAAGTTAGTTCTTCTTT+TGG | - | chr8_1:6509594-6509613 | Msa1175220:CDS | 30.0% |
!!! | TTCTTCTTTTGGTGTTTCTT+TGG | - | chr8_1:6509605-6509624 | Msa1175220:CDS | 30.0% |
TCATCATCATCATCTACTTT+AGG | - | chr8_1:6509663-6509682 | Msa1175220:CDS | 30.0% | |
TCTACTTTAGGTAGTGATAA+TGG | - | chr8_1:6509675-6509694 | Msa1175220:CDS | 30.0% | |
! | ATGTAATGGAAATGGAATGT+TGG | - | chr8_1:6509710-6509729 | Msa1175220:CDS | 30.0% |
GAACTAAATTCACTTGGTAA+TGG | + | chr8_1:6509747-6509766 | None:intergenic | 30.0% | |
!!! | TATATGCAAAGTGGTTTTGG+TGG | - | chr8_1:6509103-6509122 | Msa1175220:CDS | 35.0% |
GTTTATGGAAGTCACCAAAT+TGG | - | chr8_1:6509210-6509229 | Msa1175220:CDS | 35.0% | |
! | TCTTAAGTCTTTGCCTGTTT+TGG | - | chr8_1:6509248-6509267 | Msa1175220:CDS | 35.0% |
TGAGGATTTCAAAGATGGTT+TGG | - | chr8_1:6509281-6509300 | Msa1175220:CDS | 35.0% | |
TGTCTTTGTGATGTTGTTGA+AGG | - | chr8_1:6509315-6509334 | Msa1175220:CDS | 35.0% | |
! | TGAAACCCATGATTGCATTT+TGG | + | chr8_1:6509360-6509379 | None:intergenic | 35.0% |
ATTCTACTTGTCCTCTTTGT+AGG | - | chr8_1:6509412-6509431 | Msa1175220:CDS | 35.0% | |
! | AATGTGTTAGTCTCATCAGA+AGG | - | chr8_1:6509495-6509514 | Msa1175220:CDS | 35.0% |
!!! | TCCCTACAAATGTTTTGGTT+TGG | - | chr8_1:6509559-6509578 | Msa1175220:CDS | 35.0% |
CCCAAACCAAAACATTTGTA+GGG | + | chr8_1:6509563-6509582 | None:intergenic | 35.0% | |
!!! | CCCTACAAATGTTTTGGTTT+GGG | - | chr8_1:6509560-6509579 | Msa1175220:CDS | 35.0% |
!!! | CCTACAAATGTTTTGGTTTG+GGG | - | chr8_1:6509561-6509580 | Msa1175220:CDS | 35.0% |
!!! | CTACAAATGTTTTGGTTTGG+GGG | - | chr8_1:6509562-6509581 | Msa1175220:CDS | 35.0% |
GAGGAAGAACTAAATTCACT+TGG | + | chr8_1:6509753-6509772 | None:intergenic | 35.0% | |
ATTATCAGAAGGTGACAATG+AGG | + | chr8_1:6509772-6509791 | None:intergenic | 35.0% | |
CATTGTCACCTTCTGATAAT+AGG | - | chr8_1:6509772-6509791 | Msa1175220:CDS | 35.0% | |
TCAACACACCTATTATCAGA+AGG | + | chr8_1:6509783-6509802 | None:intergenic | 35.0% | |
CAAGATTGAGGTCATTTAAG+AGG | - | chr8_1:6509829-6509848 | Msa1175220:CDS | 35.0% | |
!!! | TATATGCAAAGTGGTTTTGG+TGG | - | chr8_1:6509103-6509122 | Msa1175220:CDS | 35.0% |
GTTTATGGAAGTCACCAAAT+TGG | - | chr8_1:6509210-6509229 | Msa1175220:CDS | 35.0% | |
! | TCTTAAGTCTTTGCCTGTTT+TGG | - | chr8_1:6509248-6509267 | Msa1175220:CDS | 35.0% |
TGAGGATTTCAAAGATGGTT+TGG | - | chr8_1:6509281-6509300 | Msa1175220:CDS | 35.0% | |
TGTCTTTGTGATGTTGTTGA+AGG | - | chr8_1:6509315-6509334 | Msa1175220:CDS | 35.0% | |
! | TGAAACCCATGATTGCATTT+TGG | + | chr8_1:6509360-6509379 | None:intergenic | 35.0% |
ATTCTACTTGTCCTCTTTGT+AGG | - | chr8_1:6509412-6509431 | Msa1175220:CDS | 35.0% | |
! | AATGTGTTAGTCTCATCAGA+AGG | - | chr8_1:6509495-6509514 | Msa1175220:CDS | 35.0% |
!!! | TCCCTACAAATGTTTTGGTT+TGG | - | chr8_1:6509559-6509578 | Msa1175220:CDS | 35.0% |
CCCAAACCAAAACATTTGTA+GGG | + | chr8_1:6509563-6509582 | None:intergenic | 35.0% | |
!!! | CCCTACAAATGTTTTGGTTT+GGG | - | chr8_1:6509560-6509579 | Msa1175220:CDS | 35.0% |
!!! | CCTACAAATGTTTTGGTTTG+GGG | - | chr8_1:6509561-6509580 | Msa1175220:CDS | 35.0% |
!!! | CTACAAATGTTTTGGTTTGG+GGG | - | chr8_1:6509562-6509581 | Msa1175220:CDS | 35.0% |
GAGGAAGAACTAAATTCACT+TGG | + | chr8_1:6509753-6509772 | None:intergenic | 35.0% | |
ATTATCAGAAGGTGACAATG+AGG | + | chr8_1:6509772-6509791 | None:intergenic | 35.0% | |
CATTGTCACCTTCTGATAAT+AGG | - | chr8_1:6509772-6509791 | Msa1175220:CDS | 35.0% | |
TCAACACACCTATTATCAGA+AGG | + | chr8_1:6509783-6509802 | None:intergenic | 35.0% | |
CAAGATTGAGGTCATTTAAG+AGG | - | chr8_1:6509829-6509848 | Msa1175220:CDS | 35.0% | |
CAACTGCAACTGCAACAAAA+GGG | - | chr8_1:6508971-6508990 | Msa1175220:CDS | 40.0% | |
AAAGGGTCAGGTGATGTATT+AGG | - | chr8_1:6508988-6509007 | Msa1175220:CDS | 40.0% | |
TAAACAACAGGATCTTGACC+AGG | + | chr8_1:6509195-6509214 | None:intergenic | 40.0% | |
! | GGTCAAGATCCTGTTGTTTA+TGG | - | chr8_1:6509195-6509214 | Msa1175220:CDS | 40.0% |
TGGTGACTTCCATAAACAAC+AGG | + | chr8_1:6509207-6509226 | None:intergenic | 40.0% | |
CCCCAAACCAAAACATTTGT+AGG | + | chr8_1:6509564-6509583 | None:intergenic | 40.0% | |
! | GATGATGATGATGCTGAACA+AGG | + | chr8_1:6509654-6509673 | None:intergenic | 40.0% |
CACCAATGACAACAAGATTG+AGG | - | chr8_1:6509817-6509836 | Msa1175220:CDS | 40.0% | |
! | GACCTCAATCTTGTTGTCAT+TGG | + | chr8_1:6509822-6509841 | None:intergenic | 40.0% |
TCCTTCAACTCCAAGTTCTA+TGG | - | chr8_1:6509878-6509897 | Msa1175220:CDS | 40.0% | |
TCCATAGAACTTGGAGTTGA+AGG | + | chr8_1:6509882-6509901 | None:intergenic | 40.0% | |
AACTCCAAGTTCTATGGATG+TGG | - | chr8_1:6509884-6509903 | Msa1175220:CDS | 40.0% | |
TGTTCCACATCCATAGAACT+TGG | + | chr8_1:6509891-6509910 | None:intergenic | 40.0% | |
AGTTCTATGGATGTGGAACA+AGG | - | chr8_1:6509891-6509910 | Msa1175220:CDS | 40.0% | |
CAACTGCAACTGCAACAAAA+GGG | - | chr8_1:6508971-6508990 | Msa1175220:CDS | 40.0% | |
AAAGGGTCAGGTGATGTATT+AGG | - | chr8_1:6508988-6509007 | Msa1175220:CDS | 40.0% | |
TAAACAACAGGATCTTGACC+AGG | + | chr8_1:6509195-6509214 | None:intergenic | 40.0% | |
! | GGTCAAGATCCTGTTGTTTA+TGG | - | chr8_1:6509195-6509214 | Msa1175220:CDS | 40.0% |
TGGTGACTTCCATAAACAAC+AGG | + | chr8_1:6509207-6509226 | None:intergenic | 40.0% | |
CCCCAAACCAAAACATTTGT+AGG | + | chr8_1:6509564-6509583 | None:intergenic | 40.0% | |
! | GATGATGATGATGCTGAACA+AGG | + | chr8_1:6509654-6509673 | None:intergenic | 40.0% |
CACCAATGACAACAAGATTG+AGG | - | chr8_1:6509817-6509836 | Msa1175220:CDS | 40.0% | |
! | GACCTCAATCTTGTTGTCAT+TGG | + | chr8_1:6509822-6509841 | None:intergenic | 40.0% |
TCCTTCAACTCCAAGTTCTA+TGG | - | chr8_1:6509878-6509897 | Msa1175220:CDS | 40.0% | |
TCCATAGAACTTGGAGTTGA+AGG | + | chr8_1:6509882-6509901 | None:intergenic | 40.0% | |
AACTCCAAGTTCTATGGATG+TGG | - | chr8_1:6509884-6509903 | Msa1175220:CDS | 40.0% | |
TGTTCCACATCCATAGAACT+TGG | + | chr8_1:6509891-6509910 | None:intergenic | 40.0% | |
AGTTCTATGGATGTGGAACA+AGG | - | chr8_1:6509891-6509910 | Msa1175220:CDS | 40.0% | |
GCAACTGCAACTGCAACAAA+AGG | - | chr8_1:6508970-6508989 | Msa1175220:CDS | 45.0% | |
GCAACTGCAACTGCAACAAA+AGG | - | chr8_1:6508970-6508989 | Msa1175220:CDS | 45.0% | |
GCAACTGCAACAAAAGGGTC+AGG | - | chr8_1:6508976-6508995 | Msa1175220:CDS | 50.0% | |
!!! | GTGGTTTTGGTGGCGTTTTG+AGG | - | chr8_1:6509113-6509132 | Msa1175220:CDS | 50.0% |
GCAACTGCAACAAAAGGGTC+AGG | - | chr8_1:6508976-6508995 | Msa1175220:CDS | 50.0% | |
!!! | GTGGTTTTGGTGGCGTTTTG+AGG | - | chr8_1:6509113-6509132 | Msa1175220:CDS | 50.0% |
AAACAAACCGCCGTCGACGA+CGG | + | chr8_1:6509167-6509186 | None:intergenic | 55.0% | |
!!! | CGGCGGTTTGTTTTTGCTCC+TGG | - | chr8_1:6509174-6509193 | Msa1175220:CDS | 55.0% |
AAACAAACCGCCGTCGACGA+CGG | + | chr8_1:6509167-6509186 | None:intergenic | 55.0% | |
!!! | CGGCGGTTTGTTTTTGCTCC+TGG | - | chr8_1:6509174-6509193 | Msa1175220:CDS | 55.0% |
CGACGGCGGTTTCTTGGTTG+AGG | + | chr8_1:6509150-6509169 | None:intergenic | 60.0% | |
CAAGAAACCGCCGTCGTCGA+CGG | - | chr8_1:6509154-6509173 | Msa1175220:CDS | 60.0% | |
CGACGGCGGTTTCTTGGTTG+AGG | + | chr8_1:6509150-6509169 | None:intergenic | 60.0% | |
CAAGAAACCGCCGTCGTCGA+CGG | - | chr8_1:6509154-6509173 | Msa1175220:CDS | 60.0% | |
CGTCGACGACGGCGGTTTCT+TGG | + | chr8_1:6509156-6509175 | None:intergenic | 65.0% | |
CGTCGACGACGGCGGTTTCT+TGG | + | chr8_1:6509156-6509175 | None:intergenic | 65.0% | |
GAAACCGCCGTCGTCGACGG+CGG | - | chr8_1:6509157-6509176 | Msa1175220:CDS | 70.0% | |
CAAACCGCCGTCGACGACGG+CGG | + | chr8_1:6509164-6509183 | None:intergenic | 70.0% | |
GAAACCGCCGTCGTCGACGG+CGG | - | chr8_1:6509157-6509176 | Msa1175220:CDS | 70.0% | |
CAAACCGCCGTCGACGACGG+CGG | + | chr8_1:6509164-6509183 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 6508952 | 6509923 | 6508952 | ID=Msa1175220;Name=Msa1175220 |
chr8_1 | mRNA | 6508952 | 6509923 | 6508952 | ID=Msa1175220-mRNA-1;Parent=Msa1175220;Name=Msa1175220-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|323 |
chr8_1 | exon | 6508952 | 6509923 | 6508952 | ID=Msa1175220-mRNA-1:exon:2324;Parent=Msa1175220-mRNA-1 |
chr8_1 | CDS | 6508952 | 6509923 | 6508952 | ID=Msa1175220-mRNA-1:cds;Parent=Msa1175220-mRNA-1 |
Gene Sequence |
Protein sequence |