AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0241470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0241470 MtrunA17_Chr2g0292951 89.512 410 34 2 1 401 1 410 0.0 677
Msa0241470 MtrunA17_Chr2g0292961 73.626 455 19 5 408 858 1 358 0.0 645
Msa0241470 MtrunA17_Chr5g0442241 43.257 393 182 13 14 395 16 378 3.40e-66 234
Msa0241470 MtrunA17_Chr7g0233411 40.187 214 110 4 186 396 6 204 6.83e-30 119
Msa0241470 MtrunA17_Chr5g0442271 38.525 122 59 3 276 395 2 109 3.99e-15 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0241470 AT2G34780.1 26.349 945 525 26 1 854 1 865 1.79e-38 155
Msa0241470 AT2G34780.3 26.127 865 475 24 81 854 13 804 3.50e-31 132
Msa0241470 AT2G34780.4 26.127 865 475 24 81 854 13 804 3.50e-31 132
Msa0241470 AT2G34780.2 26.127 865 475 24 81 854 13 804 3.50e-31 132

Find 161 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTCTTTGGAAAATTTA+AGG 0.058964 2_2:+17029663 Msa0241470:CDS
GAGATTTCTTTCTCTTCTTA+TGG 0.139780 2_2:-17029157 None:intergenic
AACATTTGCTTTGGATAATA+TGG 0.150474 2_2:+17029466 Msa0241470:CDS
GGCCTTCTCTGCCTCAATTT+TGG 0.175904 2_2:-17026993 None:intergenic
CAGCATCAACTTCCTAATTT+TGG 0.184911 2_2:+17029722 Msa0241470:CDS
TACAGGTATTGGTTCTAAAT+TGG 0.200405 2_2:+17028728 Msa0241470:CDS
AAATTTAAGGGATACATTTC+TGG 0.202649 2_2:+17029676 Msa0241470:CDS
AAGTTCTCCTCGGCTGATTT+TGG 0.265785 2_2:-17028879 None:intergenic
ACAGGTGCTCAGGAAGAAAA+TGG 0.271259 2_2:+17026800 Msa0241470:CDS
GTTGCAGGACACTCATTCTT+TGG 0.274854 2_2:+17029652 Msa0241470:CDS
AGATTTCTTTCTCTTCTTAT+GGG 0.290903 2_2:-17029156 None:intergenic
TTCCTCGCTCGCGCTTCTAA+TGG 0.306463 2_2:+17024952 Msa0241470:five_prime_UTR
TCCTCATAGACTACAGCTTT+TGG 0.312141 2_2:-17029230 None:intergenic
TTCCTTATCCCTATCATAAT+CGG 0.318545 2_2:-17026843 None:intergenic
TCGCTCTCGCTAATTCTTCC+TGG 0.324388 2_2:-17026670 None:intergenic
TTGGTGCATGCGATTCTTTA+AGG 0.337806 2_2:+17028646 Msa0241470:CDS
CCATCTGACAGATCAGTTAT+TGG 0.341357 2_2:+17028927 Msa0241470:CDS
AGAAAACCCAATGAAATATC+TGG 0.343488 2_2:+17027382 Msa0241470:CDS
CTTTGAAAGCCGATTATGAT+AGG 0.345347 2_2:+17026834 Msa0241470:CDS
CGAGACTGAAACATTTGCTT+TGG 0.351796 2_2:+17029457 Msa0241470:CDS
TCACTTTCAGCATTCACATT+AGG 0.351930 2_2:-17027412 None:intergenic
AACTTTGATGAAATATATAA+TGG 0.353085 2_2:+17029341 Msa0241470:CDS
TGCTGAAGCTAGTAAGTTAT+TGG 0.354050 2_2:+17026952 Msa0241470:CDS
GATACTATGAGACCAAAATT+AGG 0.355682 2_2:-17029734 None:intergenic
TTTAGAACCAATACCTGTAA+TGG 0.360175 2_2:-17028724 None:intergenic
AGGATGCATCCAGCATATTA+AGG 0.364535 2_2:-17027627 None:intergenic
TCATTCTTTGGAAAATTTAA+GGG 0.365196 2_2:+17029664 Msa0241470:CDS
ACCGAACCCATTACAGGTAT+TGG 0.365844 2_2:+17028717 Msa0241470:CDS
AGAGGCTTGCTCAAGATAAC+TGG 0.381498 2_2:+17027248 Msa0241470:CDS
GCTAGTAAGTTATTGGATAA+GGG 0.392277 2_2:+17026959 Msa0241470:CDS
TTATTGGTCATGATGGAATA+AGG 0.395603 2_2:+17028943 Msa0241470:CDS
AGAAGAGAAAGAAATCTCAT+AGG 0.395810 2_2:+17029162 Msa0241470:CDS
TTTCAAAGCCTTGCAGCATA+AGG 0.397707 2_2:+17028622 Msa0241470:CDS
TTGAAGGAGATGAATCTCTT+TGG 0.401742 2_2:-17029529 None:intergenic
TTAGAACCAATACCTGTAAT+GGG 0.403828 2_2:-17028723 None:intergenic
CAGAGAAGGCCGAGGAGTAT+AGG 0.405289 2_2:+17027005 Msa0241470:CDS
TAGGCTTCAGCAAGTTCGTT+TGG 0.405325 2_2:+17027024 Msa0241470:CDS
AGCTAGTAAGTTATTGGATA+AGG 0.407822 2_2:+17026958 Msa0241470:CDS
TCAACAGAGCTGTGCATTTG+AGG 0.408398 2_2:-17028591 None:intergenic
GAATAAAATCAAGCTTTAAA+CGG 0.411283 2_2:-17027591 None:intergenic
TCTAAATTGGAGCCTCTCAT+AGG 0.417092 2_2:+17028741 Msa0241470:CDS
ACATCAGGTTTCTGCATGCT+TGG 0.417771 2_2:-17028540 None:intergenic
TTTCTGGTGGAGACTGGAAC+TGG 0.423502 2_2:+17029692 Msa0241470:CDS
AATTATACCGAACCCATTAC+AGG 0.424864 2_2:+17028711 Msa0241470:CDS
AGGAATTGCAAATGCATCAT+TGG 0.426650 2_2:-17029585 None:intergenic
GATACTCCAGATATTTCATT+GGG 0.427376 2_2:-17027388 None:intergenic
TTGTGGAGAAAGAAAAGAAA+AGG 0.433199 2_2:+17026885 Msa0241470:CDS
AGATACTCCAGATATTTCAT+TGG 0.436128 2_2:-17027389 None:intergenic
CTCAAACTACTCAGGCATGC+AGG 0.442053 2_2:+17029294 Msa0241470:CDS
TTGTATAGCACGGTGCAGTT+TGG 0.442206 2_2:+17029808 Msa0241470:CDS
AGTTCTTCACACAGACTTGT+TGG 0.446513 2_2:+17029505 Msa0241470:CDS
ATTTCGTGATTCTTGAAACT+TGG 0.447040 2_2:-17025211 None:intergenic
CAGAGTTGAGTCACGACATC+AGG 0.447147 2_2:-17028555 None:intergenic
CTTGATGGGCTCACAGGAAA+GGG 0.447613 2_2:+17028833 Msa0241470:CDS
TGAAGAACTTCATTCTGAAA+AGG 0.448858 2_2:-17029491 None:intergenic
AGAAGCTCTTAGTGGAGAAA+AGG 0.457969 2_2:+17027134 Msa0241470:CDS
CAGGTGCTCAGGAAGAAAAT+GGG 0.458762 2_2:+17026801 Msa0241470:CDS
AGCATTCAATCCTTCTGAAT+CGG 0.462597 2_2:+17025041 Msa0241470:CDS
TGCAGTTTGGATACTCAAAC+TGG 0.465852 2_2:+17029821 Msa0241470:CDS
AAAGCAAATGTTTCAGTCTC+GGG 0.466468 2_2:-17029455 None:intergenic
AGGATAATAGTTGCATATCT+AGG 0.467438 2_2:+17029765 Msa0241470:CDS
GAAATGTGGCACAGGTGCTC+AGG 0.470366 2_2:+17026790 Msa0241470:CDS
CTACAATCACCTTAATATGC+TGG 0.470595 2_2:+17027618 Msa0241470:CDS
ACCAATACCTGTAATGGGTT+CGG 0.471714 2_2:-17028718 None:intergenic
GATACATTTCTGGTGGAGAC+TGG 0.473835 2_2:+17029686 Msa0241470:CDS
TATTTCATCAAAGTTGTTTG+AGG 0.475196 2_2:-17029333 None:intergenic
GAAGGATAAGAAGGTAATTG+AGG 0.476320 2_2:+17027324 Msa0241470:CDS
CAAAGCAAATGTTTCAGTCT+CGG 0.476932 2_2:-17029456 None:intergenic
GGAAGAAGTTTGAGCATGAA+AGG 0.478134 2_2:+17027515 Msa0241470:CDS
TAATGAACACAGGGCAAAGC+AGG 0.480131 2_2:+17029610 Msa0241470:CDS
TTTGCCCTGTGTTCATTACA+AGG 0.482017 2_2:-17029605 None:intergenic
ACAAACTGATGTGAAGTTGC+AGG 0.483514 2_2:+17029637 Msa0241470:CDS
TGTAGTTTCTGCAGCATACC+AGG 0.488807 2_2:+17026652 Msa0241470:intron
ATCTACATGCAGAGAATGAC+AGG 0.492112 2_2:+17029132 Msa0241470:CDS
GTCATGATGGAATAAGGAAT+AGG 0.495269 2_2:+17028949 Msa0241470:CDS
GAAGAGAAAGAAATCTCATA+GGG 0.499332 2_2:+17029163 Msa0241470:CDS
ATGACATCACATCTAGTTGA+AGG 0.503133 2_2:-17029545 None:intergenic
AGCCGATTATGATAGGGATA+AGG 0.505472 2_2:+17026841 Msa0241470:CDS
GATTTCTTTCTCTTCTTATG+GGG 0.510360 2_2:-17029155 None:intergenic
CCACTTCTTGCTATATCTGA+AGG 0.510679 2_2:+17028687 Msa0241470:CDS
ACTTCCAGCGACAGGTGAAA+AGG 0.512164 2_2:-17027647 None:intergenic
AGATCAGTTATTGGTCATGA+TGG 0.512517 2_2:+17028936 Msa0241470:CDS
TGCACACTTGATGGGCTCAC+AGG 0.512807 2_2:+17028827 Msa0241470:CDS
GTGACTCAACTCTGCAGTCT+AGG 0.513442 2_2:+17028564 Msa0241470:CDS
TTGGTCTCATAGTATCGGAT+AGG 0.513806 2_2:+17029741 Msa0241470:CDS
TGAAAGATTGAAGAAACTTG+TGG 0.515782 2_2:+17026868 Msa0241470:CDS
CATTCTGTCTGCAGTTGACA+TGG 0.518798 2_2:+17029859 Msa0241470:CDS
AGCATGCAGATGAGCAGAAG+AGG 0.520953 2_2:+17027230 Msa0241470:CDS
GGAGTTATTGAAGGATAAGA+AGG 0.522235 2_2:+17027315 Msa0241470:CDS
AAAATGAACGAATCCGTTGA+AGG 0.524733 2_2:+17029077 Msa0241470:CDS
CAATTCCTTGTAATGAACAC+AGG 0.526138 2_2:+17029600 Msa0241470:CDS
AAGCCTTGCAGCATAAGGAT+TGG 0.528737 2_2:+17028627 Msa0241470:CDS
TTCCAAAATTGAGGCAGAGA+AGG 0.531688 2_2:+17026991 Msa0241470:CDS
CTGTTTGAGCCTCCTATGAG+AGG 0.531881 2_2:-17028753 None:intergenic
CATCTCTCTCCCTCCTTCAA+CGG 0.533480 2_2:-17029090 None:intergenic
TCTTAAAGAACTCAATGCTA+AGG 0.534458 2_2:+17026712 Msa0241470:CDS
CTCGCTCGCGCTTCTAATGG+CGG 0.537445 2_2:+17024955 Msa0241470:five_prime_UTR
GATGCAGCTTTCCAAAATTG+AGG 0.537975 2_2:+17026982 Msa0241470:CDS
TGAGTTGTCAAAGTTTGAAG+AGG 0.538606 2_2:+17027084 Msa0241470:CDS
AATTACGTGCAAAGCATGCA+AGG 0.538964 2_2:+17027473 Msa0241470:CDS
GAGGTCTCAGGAGTTATTGA+AGG 0.539380 2_2:+17027306 Msa0241470:CDS
TCTTGCTTATCAGAGGTCTC+AGG 0.540938 2_2:+17027294 Msa0241470:CDS
GAATGCTTGTTCTGCCGCCA+TGG 0.540941 2_2:-17025025 None:intergenic
GAAGAAAAGAAGAGTCAAGA+AGG 0.541720 2_2:-17024932 None:intergenic
GTAGTTTGAGCATATAATGC+AGG 0.542171 2_2:-17029281 None:intergenic
TGGTCTCATAGTATCGGATA+GGG 0.542983 2_2:+17029742 Msa0241470:CDS
AAAAGCTCAAGAGCAGGCAG+AGG 0.543527 2_2:+17027177 Msa0241470:CDS
TCCAAAAGCTGTAGTCTATG+AGG 0.543533 2_2:+17029229 Msa0241470:CDS
GTTTGGATACTCAAACTGGA+TGG 0.545507 2_2:+17029825 Msa0241470:CDS
CTAGTAAGTTATTGGATAAG+GGG 0.547146 2_2:+17026960 Msa0241470:CDS
TTTGAAAGCCGATTATGATA+GGG 0.547536 2_2:+17026835 Msa0241470:CDS
TCTTGCATTGAAGTTCTCCT+CGG 0.548596 2_2:-17028889 None:intergenic
TGTGGAGAAAGAAAAGAAAA+GGG 0.549198 2_2:+17026886 Msa0241470:CDS
TGTTGCAAATTTGTCTTCTG+AGG 0.550927 2_2:+17028992 Msa0241470:CDS
AAGGGCTGATTCTGAGAAGA+AGG 0.552470 2_2:+17026904 Msa0241470:CDS
ACTCAAACTGGATGGGCAGT+TGG 0.552580 2_2:+17029833 Msa0241470:CDS
ACTTGATGGGCTCACAGGAA+AGG 0.556320 2_2:+17028832 Msa0241470:CDS
TGTTAAATTACTTGAACGAA+AGG 0.557535 2_2:+17025248 Msa0241470:CDS
TCAGTCTCGGGAAAAGATAG+TGG 0.562677 2_2:-17029443 None:intergenic
AAGTATACACGGACTAGCTA+AGG 0.563390 2_2:+17027666 Msa0241470:CDS
TGAACGAATCCGTTGAAGGA+GGG 0.564652 2_2:+17029081 Msa0241470:CDS
ATTATATGCTCAAACTACTC+AGG 0.570062 2_2:+17029286 Msa0241470:CDS
CTTAGAAAATGCTGTTGATG+AGG 0.571987 2_2:+17029385 Msa0241470:CDS
GGGAAAAGTTAAAACATGAA+AGG 0.572495 2_2:+17027494 Msa0241470:CDS
CCGTGTATACTTCCAGCGAC+AGG 0.573559 2_2:-17027655 None:intergenic
TTTAAGGGATACATTTCTGG+TGG 0.575251 2_2:+17029679 Msa0241470:CDS
CCTTCAGATATAGCAAGAAG+TGG 0.581879 2_2:-17028687 None:intergenic
CGCCATTAGAAGCGCGAGCG+AGG 0.583131 2_2:-17024954 None:intergenic
TCAAACTACTCAGGCATGCA+GGG 0.584106 2_2:+17029295 Msa0241470:CDS
CCTGTCGCTGGAAGTATACA+CGG 0.586411 2_2:+17027655 Msa0241470:CDS
CAAAACATCTTGCTTATCAG+AGG 0.592417 2_2:+17027287 Msa0241470:CDS
CACTTCTTGCTATATCTGAA+GGG 0.593010 2_2:+17028688 Msa0241470:CDS
GGAAGAAAATGGGGATGTGA+AGG 0.594233 2_2:+17026811 Msa0241470:CDS
AAATTGGAGCCTCTCATAGG+AGG 0.594640 2_2:+17028744 Msa0241470:CDS
AATTGAGGCAGAGAAGGCCG+AGG 0.598023 2_2:+17026997 Msa0241470:CDS
TTGCAGCAGAAATGTGGCAC+AGG 0.598791 2_2:+17026782 Msa0241470:CDS
GATAAGCTCTCTGACTTGTG+TGG 0.601664 2_2:+17029041 Msa0241470:CDS
GCACCAATCCTTATGCTGCA+AGG 0.601742 2_2:-17028630 None:intergenic
CCAATAACTGATCTGTCAGA+TGG 0.601870 2_2:-17028927 None:intergenic
CGTTGAAGGAGGGAGAGAGA+TGG 0.605052 2_2:+17029091 Msa0241470:CDS
GAGAGATGGTTACTAATCAG+AGG 0.609312 2_2:+17029105 Msa0241470:CDS
TTGCTGAAGCCTATACTCCT+CGG 0.610766 2_2:-17027014 None:intergenic
TTTGGATACTCAAACTGGAT+GGG 0.614156 2_2:+17029826 Msa0241470:CDS
GGGAAAAGATAGTGGTGACA+AGG 0.614805 2_2:-17029435 None:intergenic
ATGAACGAATCCGTTGAAGG+AGG 0.618103 2_2:+17029080 Msa0241470:CDS
GTAGTCTATGAGGATGCAGA+TGG 0.620856 2_2:+17029239 Msa0241470:CDS
CTGCAAGAAGTTGTATAGCA+CGG 0.621117 2_2:+17029798 Msa0241470:CDS
GTTGCAAATTTGTCTTCTGA+GGG 0.622091 2_2:+17028993 Msa0241470:CDS
ACTGCATTGCAGCAGAAATG+TGG 0.627969 2_2:+17026776 Msa0241470:CDS
AGAGATGGTTACTAATCAGA+GGG 0.639120 2_2:+17029106 Msa0241470:CDS
CATACATGTGCATATGAGAG+AGG 0.639402 2_2:-17024907 None:intergenic
AGGTGCTCAGGAAGAAAATG+GGG 0.654066 2_2:+17026802 Msa0241470:CDS
TTGATGGGCTCACAGGAAAG+GGG 0.655794 2_2:+17028834 Msa0241470:CDS
AATTCCTTGTAATGAACACA+GGG 0.656748 2_2:+17029601 Msa0241470:CDS
ATTACGTGCAAAGCATGCAA+GGG 0.659492 2_2:+17027474 Msa0241470:CDS
TCAGATATAGCAAGAAGTGG+AGG 0.662696 2_2:-17028684 None:intergenic
CACATCACCAAAATCAGCCG+AGG 0.667694 2_2:+17028872 Msa0241470:CDS
TCTCATAGTATCGGATAGGG+AGG 0.673146 2_2:+17029745 Msa0241470:CDS
GGAAAAGATAGTGGTGACAA+GGG 0.681082 2_2:-17029434 None:intergenic
GGAAAATCACTGTTGCGCTG+AGG 0.694181 2_2:+17025062 Msa0241470:CDS
AAATCAACAATAAACCATGG+CGG 0.745719 2_2:+17025011 Msa0241470:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAAAATAAAATTATTGATTA+AGG + chr2_2:17025402-17025421 Msa0241470:intron 10.0%
!! AGGAAAAAGAAAAATAAAAA+GGG - chr2_2:17026582-17026601 None:intergenic 15.0%
!! ATTAAAAAATTATCACAGTT+AGG - chr2_2:17028345-17028364 None:intergenic 15.0%
!!! TAACTGTGATAATTTTTTAA+TGG + chr2_2:17028344-17028363 Msa0241470:intron 15.0%
!!! ATTGTTGATTTTTTTTGCAT+CGG - chr2_2:17025002-17025021 None:intergenic 20.0%
!! AAAAAATCAACAATAAACCA+TGG + chr2_2:17025008-17025027 Msa0241470:exon 20.0%
!! CATAGATTTCAAATTTCAAT+CGG - chr2_2:17025144-17025163 None:intergenic 20.0%
!!! AGTATTTTTTGTTTGAATTC+TGG + chr2_2:17025777-17025796 Msa0241470:intron 20.0%
!! TTGAATAAAATTACACATGT+TGG + chr2_2:17026021-17026040 Msa0241470:intron 20.0%
!!! ACTTTCAATTTGGAATATTA+TGG + chr2_2:17026088-17026107 Msa0241470:intron 20.0%
!! TTGATATATTTGAATGTTTG+TGG + chr2_2:17026538-17026557 Msa0241470:intron 20.0%
!! GAAAAAGAAAAATAAAAAGG+GGG - chr2_2:17026580-17026599 None:intergenic 20.0%
!! GGAAAAAGAAAAATAAAAAG+GGG - chr2_2:17026581-17026600 None:intergenic 20.0%
!! GAGGAAAAAGAAAAATAAAA+AGG - chr2_2:17026583-17026602 None:intergenic 20.0%
!!! GAATAAAATCAAGCTTTAAA+CGG - chr2_2:17027594-17027613 None:intergenic 20.0%
!! ACTGTAAAATGTAAATAGTT+CGG - chr2_2:17027704-17027723 None:intergenic 20.0%
!! AAGTTTAATATTGATATGCA+TGG + chr2_2:17027807-17027826 Msa0241470:intron 20.0%
!! GTTATTATACAATCTAAAAG+AGG + chr2_2:17027868-17027887 Msa0241470:intron 20.0%
!!! AACACATGAATAGTAATTTT+AGG + chr2_2:17027984-17028003 Msa0241470:intron 20.0%
!! GAAATAAGTCAAACAATAAA+GGG - chr2_2:17028307-17028326 None:intergenic 20.0%
!! TGAAATAAGTCAAACAATAA+AGG - chr2_2:17028308-17028327 None:intergenic 20.0%
!!! TCATTCTTTGGAAAATTTAA+GGG + chr2_2:17029664-17029683 Msa0241470:CDS 20.0%
! AATCTAGAAGAAATAAAGAG+AGG - chr2_2:17025101-17025120 None:intergenic 25.0%
! TGTTAAATTACTTGAACGAA+AGG + chr2_2:17025248-17025267 Msa0241470:CDS 25.0%
! GAAAATGCTAATCTCAAAAA+AGG + chr2_2:17025288-17025307 Msa0241470:CDS 25.0%
! ATAGCTTCTGCAAATAAATA+AGG - chr2_2:17025590-17025609 None:intergenic 25.0%
! TTTAATAAGCTCAATCCAAA+CGG + chr2_2:17025611-17025630 Msa0241470:intron 25.0%
!!! ATTCCAAATTGAAAGTGTTT+CGG - chr2_2:17026084-17026103 None:intergenic 25.0%
! AATAATGCTTTACTTGACTT+AGG + chr2_2:17026308-17026327 Msa0241470:intron 25.0%
!! TGCAAGAAAAATCTAAGATA+CGG - chr2_2:17026359-17026378 None:intergenic 25.0%
! ACATGATAGAAAATTGCATA+TGG + chr2_2:17026476-17026495 Msa0241470:intron 25.0%
! TACTGAAACAAAAATGAAGT+TGG + chr2_2:17027057-17027076 Msa0241470:CDS 25.0%
! TCACTATTAACATTGAAAGA+CGG - chr2_2:17027841-17027860 None:intergenic 25.0%
! ATTTCTGATGTGTGAAATAA+AGG - chr2_2:17027920-17027939 None:intergenic 25.0%
!! AGTAAAGGTATGTAGATAAA+AGG + chr2_2:17028213-17028232 Msa0241470:intron 25.0%
!! GTAAAGGTATGTAGATAAAA+GGG + chr2_2:17028214-17028233 Msa0241470:intron 25.0%
!! TAAAGGTATGTAGATAAAAG+GGG + chr2_2:17028215-17028234 Msa0241470:intron 25.0%
! GACTTATTTCAATATGTTAG+TGG + chr2_2:17028317-17028336 Msa0241470:intron 25.0%
!!! TCTCTTTTTCATTGAATATG+TGG + chr2_2:17028367-17028386 Msa0241470:intron 25.0%
!! TTTTTCATTGAATATGTGGA+TGG + chr2_2:17028371-17028390 Msa0241470:intron 25.0%
! GTGAAGATAGAAATTGTAAA+AGG + chr2_2:17028397-17028416 Msa0241470:intron 25.0%
! GATAGAAATTGTAAAAGGTT+AGG + chr2_2:17028402-17028421 Msa0241470:intron 25.0%
! AGATTTCTTTCTCTTCTTAT+GGG - chr2_2:17029159-17029178 None:intergenic 25.0%
! TATTTCATCAAAGTTGTTTG+AGG - chr2_2:17029336-17029355 None:intergenic 25.0%
!! AACATTTGCTTTGGATAATA+TGG + chr2_2:17029466-17029485 Msa0241470:CDS 25.0%
!! CTCATTCTTTGGAAAATTTA+AGG + chr2_2:17029663-17029682 Msa0241470:CDS 25.0%
! AAATTTAAGGGATACATTTC+TGG + chr2_2:17029676-17029695 Msa0241470:CDS 25.0%
!!! TAATTTTGGTCTCATAGTAT+CGG + chr2_2:17029736-17029755 Msa0241470:CDS 25.0%
AAAAAGTGATAGAGGGTTTA+GGG + chr2_2:17024864-17024883 Msa0241470:five_prime_UTR 30.0%
!!! TTTTTTGCATCGGAGATTTA+GGG - chr2_2:17024992-17025011 None:intergenic 30.0%
!!! TTTTTTTGCATCGGAGATTT+AGG - chr2_2:17024993-17025012 None:intergenic 30.0%
AAATCAACAATAAACCATGG+CGG + chr2_2:17025011-17025030 Msa0241470:exon 30.0%
ATTTCGTGATTCTTGAAACT+TGG - chr2_2:17025214-17025233 None:intergenic 30.0%
TAAAATAAGCCAATCCAAAC+GGG - chr2_2:17025429-17025448 None:intergenic 30.0%
CTAAAATAAGCCAATCCAAA+CGG - chr2_2:17025430-17025449 None:intergenic 30.0%
TTAATAAGCTCAATCCAAAC+GGG + chr2_2:17025612-17025631 Msa0241470:intron 30.0%
TCAAATTATCACTAGTAGTG+AGG - chr2_2:17025987-17026006 None:intergenic 30.0%
TCACTACTAGTGATAATTTG+AGG + chr2_2:17025986-17026005 Msa0241470:intron 30.0%
!! TTCCAAATTGAAAGTGTTTC+GGG - chr2_2:17026083-17026102 None:intergenic 30.0%
! TTTGGAATATTATGGTGACT+TGG + chr2_2:17026096-17026115 Msa0241470:intron 30.0%
! ATGTCTAACTATGTTTGTTG+AGG + chr2_2:17026226-17026245 Msa0241470:intron 30.0%
AAACTACAAGTTACAGAGTT+TGG - chr2_2:17026640-17026659 None:intergenic 30.0%
TCTTAAAGAACTCAATGCTA+AGG + chr2_2:17026712-17026731 Msa0241470:CDS 30.0%
TTTGAAAGCCGATTATGATA+GGG + chr2_2:17026835-17026854 Msa0241470:CDS 30.0%
TTCCTTATCCCTATCATAAT+CGG - chr2_2:17026846-17026865 None:intergenic 30.0%
TGAAAGATTGAAGAAACTTG+TGG + chr2_2:17026868-17026887 Msa0241470:CDS 30.0%
TTGTGGAGAAAGAAAAGAAA+AGG + chr2_2:17026885-17026904 Msa0241470:CDS 30.0%
TGTGGAGAAAGAAAAGAAAA+GGG + chr2_2:17026886-17026905 Msa0241470:CDS 30.0%
AGCTAGTAAGTTATTGGATA+AGG + chr2_2:17026958-17026977 Msa0241470:CDS 30.0%
GCTAGTAAGTTATTGGATAA+GGG + chr2_2:17026959-17026978 Msa0241470:CDS 30.0%
CTAGTAAGTTATTGGATAAG+GGG + chr2_2:17026960-17026979 Msa0241470:CDS 30.0%
! GATATTTCATTGGGTTTTCT+TGG - chr2_2:17027382-17027401 None:intergenic 30.0%
AGAAAACCCAATGAAATATC+TGG + chr2_2:17027382-17027401 Msa0241470:CDS 30.0%
GATACTCCAGATATTTCATT+GGG - chr2_2:17027391-17027410 None:intergenic 30.0%
AGATACTCCAGATATTTCAT+TGG - chr2_2:17027392-17027411 None:intergenic 30.0%
GGGAAAAGTTAAAACATGAA+AGG + chr2_2:17027494-17027513 Msa0241470:CDS 30.0%
AAAATGTAAATAGTTCGGCA+AGG - chr2_2:17027699-17027718 None:intergenic 30.0%
TCCTGGTAAAACTTATTTGT+TGG + chr2_2:17028042-17028061 Msa0241470:intron 30.0%
! TCCAACAAATAAGTTTTACC+AGG - chr2_2:17028046-17028065 None:intergenic 30.0%
! CTTTTGCACACGTTAATTTT+TGG + chr2_2:17028121-17028140 Msa0241470:intron 30.0%
!!! TTTTGGCTTGTAGTTTTTTG+TGG + chr2_2:17028138-17028157 Msa0241470:intron 30.0%
AATTGATCAGACATATGTAC+AGG - chr2_2:17028480-17028499 None:intergenic 30.0%
TTAGAACCAATACCTGTAAT+GGG - chr2_2:17028726-17028745 None:intergenic 30.0%
! TTTAGAACCAATACCTGTAA+TGG - chr2_2:17028727-17028746 None:intergenic 30.0%
!! TACAGGTATTGGTTCTAAAT+TGG + chr2_2:17028728-17028747 Msa0241470:CDS 30.0%
! TTATTGGTCATGATGGAATA+AGG + chr2_2:17028943-17028962 Msa0241470:CDS 30.0%
GATTTCTTTCTCTTCTTATG+GGG - chr2_2:17029158-17029177 None:intergenic 30.0%
GAGATTTCTTTCTCTTCTTA+TGG - chr2_2:17029160-17029179 None:intergenic 30.0%
AGAAGAGAAAGAAATCTCAT+AGG + chr2_2:17029162-17029181 Msa0241470:CDS 30.0%
GAAGAGAAAGAAATCTCATA+GGG + chr2_2:17029163-17029182 Msa0241470:CDS 30.0%
ATTATATGCTCAAACTACTC+AGG + chr2_2:17029286-17029305 Msa0241470:CDS 30.0%
! TGAAGAACTTCATTCTGAAA+AGG - chr2_2:17029494-17029513 None:intergenic 30.0%
AATTCCTTGTAATGAACACA+GGG + chr2_2:17029601-17029620 Msa0241470:CDS 30.0%
GATACTATGAGACCAAAATT+AGG - chr2_2:17029737-17029756 None:intergenic 30.0%
AGGATAATAGTTGCATATCT+AGG + chr2_2:17029765-17029784 Msa0241470:CDS 30.0%
GAAAAAGTGATAGAGGGTTT+AGG + chr2_2:17024863-17024882 Msa0241470:five_prime_UTR 35.0%
GAAGAAAAGAAGAGTCAAGA+AGG - chr2_2:17024935-17024954 None:intergenic 35.0%
AGCATTCAATCCTTCTGAAT+CGG + chr2_2:17025041-17025060 Msa0241470:CDS 35.0%
ATCGGTGAAAATGAAAGCAA+TGG - chr2_2:17025126-17025145 None:intergenic 35.0%
TAATAAGCTCAATCCAAACG+GGG + chr2_2:17025613-17025632 Msa0241470:intron 35.0%
CACACACTACACATAACTTT+AGG - chr2_2:17025639-17025658 None:intergenic 35.0%
GTGTTCAATGTTACATGTGT+CGG + chr2_2:17026054-17026073 Msa0241470:intron 35.0%
ATCGCTAAAGACTTGAATTG+AGG - chr2_2:17026208-17026227 None:intergenic 35.0%
CTTTACTTGACTTAGGTGAT+AGG + chr2_2:17026315-17026334 Msa0241470:intron 35.0%
TTTCTTGCAATACTCTGAGT+TGG + chr2_2:17026370-17026389 Msa0241470:intron 35.0%
AGGACACACTGATAATATGA+AGG + chr2_2:17026410-17026429 Msa0241470:intron 35.0%
CACAAATATTGTTGCAGTTG+TGG + chr2_2:17026444-17026463 Msa0241470:intron 35.0%
!! AAATAAAAAGGGGGCATCAA+GGG - chr2_2:17026571-17026590 None:intergenic 35.0%
!! AAAATAAAAAGGGGGCATCA+AGG - chr2_2:17026572-17026591 None:intergenic 35.0%
GAGAGCGAAAATTGAAAAAG+AGG + chr2_2:17026685-17026704 Msa0241470:CDS 35.0%
! TGCAGTGATCTCAGATTTTA+AGG - chr2_2:17026762-17026781 None:intergenic 35.0%
! CTTTGAAAGCCGATTATGAT+AGG + chr2_2:17026834-17026853 Msa0241470:CDS 35.0%
! AGCCTTCTTTTTCTCATTCA+CGG - chr2_2:17026933-17026952 None:intergenic 35.0%
TGCTGAAGCTAGTAAGTTAT+TGG + chr2_2:17026952-17026971 Msa0241470:CDS 35.0%
TGAGTTGTCAAAGTTTGAAG+AGG + chr2_2:17027084-17027103 Msa0241470:CDS 35.0%
TGAAAAACAGAAGCTCTTAG+TGG + chr2_2:17027126-17027145 Msa0241470:CDS 35.0%
CAAAACATCTTGCTTATCAG+AGG + chr2_2:17027287-17027306 Msa0241470:CDS 35.0%
GGAGTTATTGAAGGATAAGA+AGG + chr2_2:17027315-17027334 Msa0241470:CDS 35.0%
GAAGGATAAGAAGGTAATTG+AGG + chr2_2:17027324-17027343 Msa0241470:CDS 35.0%
TCACTTTCAGCATTCACATT+AGG - chr2_2:17027415-17027434 None:intergenic 35.0%
CTACAATCACCTTAATATGC+TGG + chr2_2:17027618-17027637 Msa0241470:CDS 35.0%
TTGAAAACCTATATGTGCCA+TGG - chr2_2:17027774-17027793 None:intergenic 35.0%
TTAGGATGACAGCATTTGAT+TGG + chr2_2:17028002-17028021 Msa0241470:intron 35.0%
CCTTTACTTATAGAGAAAGC+TGG - chr2_2:17028201-17028220 None:intergenic 35.0%
CCAGCTTTCTCTATAAGTAA+AGG + chr2_2:17028198-17028217 Msa0241470:intron 35.0%
! TCTGATCAATTTTTGTCTGC+TGG + chr2_2:17028489-17028508 Msa0241470:intron 35.0%
! TTTTTGTCTGCTGGATGATT+TGG + chr2_2:17028498-17028517 Msa0241470:intron 35.0%
! CACTTCTTGCTATATCTGAA+GGG + chr2_2:17028688-17028707 Msa0241470:CDS 35.0%
AATTATACCGAACCCATTAC+AGG + chr2_2:17028711-17028730 Msa0241470:CDS 35.0%
! TTTTTCTGATGCACACTTGA+TGG + chr2_2:17028818-17028837 Msa0241470:CDS 35.0%
! TTTTCTGATGCACACTTGAT+GGG + chr2_2:17028819-17028838 Msa0241470:CDS 35.0%
AGATCAGTTATTGGTCATGA+TGG + chr2_2:17028936-17028955 Msa0241470:CDS 35.0%
! GTCATGATGGAATAAGGAAT+AGG + chr2_2:17028949-17028968 Msa0241470:CDS 35.0%
TGTTGCAAATTTGTCTTCTG+AGG + chr2_2:17028992-17029011 Msa0241470:CDS 35.0%
GTTGCAAATTTGTCTTCTGA+GGG + chr2_2:17028993-17029012 Msa0241470:CDS 35.0%
AAAATGAACGAATCCGTTGA+AGG + chr2_2:17029077-17029096 Msa0241470:CDS 35.0%
AGAGATGGTTACTAATCAGA+GGG + chr2_2:17029106-17029125 Msa0241470:CDS 35.0%
AAATCTCATAGGGAAAAAGC+AGG + chr2_2:17029173-17029192 Msa0241470:CDS 35.0%
GTAGTTTGAGCATATAATGC+AGG - chr2_2:17029284-17029303 None:intergenic 35.0%
CTTAGAAAATGCTGTTGATG+AGG + chr2_2:17029385-17029404 Msa0241470:CDS 35.0%
AAAGCAAATGTTTCAGTCTC+GGG - chr2_2:17029458-17029477 None:intergenic 35.0%
CAAAGCAAATGTTTCAGTCT+CGG - chr2_2:17029459-17029478 None:intergenic 35.0%
TTGAAGGAGATGAATCTCTT+TGG - chr2_2:17029532-17029551 None:intergenic 35.0%
ATGACATCACATCTAGTTGA+AGG - chr2_2:17029548-17029567 None:intergenic 35.0%
AGGAATTGCAAATGCATCAT+TGG - chr2_2:17029588-17029607 None:intergenic 35.0%
CAATTCCTTGTAATGAACAC+AGG + chr2_2:17029600-17029619 Msa0241470:CDS 35.0%
! TTTAAGGGATACATTTCTGG+TGG + chr2_2:17029679-17029698 Msa0241470:CDS 35.0%
! CAGCATCAACTTCCTAATTT+TGG + chr2_2:17029722-17029741 Msa0241470:CDS 35.0%
TTTGGATACTCAAACTGGAT+GGG + chr2_2:17029826-17029845 Msa0241470:CDS 35.0%
CATACATGTGCATATGAGAG+AGG - chr2_2:17024910-17024929 None:intergenic 40.0%
! CAGTGATTTTCCGATTCAGA+AGG - chr2_2:17025054-17025073 None:intergenic 40.0%
! TTATTGATTAAGGGCCCGTT+TGG + chr2_2:17025412-17025431 Msa0241470:intron 40.0%
! CTGTATCGGTGCTTAATACA+AGG - chr2_2:17025676-17025695 None:intergenic 40.0%
!! ATTAAGCACCGATACAGACA+CGG + chr2_2:17025679-17025698 Msa0241470:intron 40.0%
!! TTGAGGGTTGAAAGTATTGG+AGG - chr2_2:17025804-17025823 None:intergenic 40.0%
! GAGTTGAGGGTTGAAAGTAT+TGG - chr2_2:17025807-17025826 None:intergenic 40.0%
TTGCACGTAATCACATGTGT+CGG - chr2_2:17025885-17025904 None:intergenic 40.0%
!! TACACATGTTGGTGTTGTGT+TGG + chr2_2:17026032-17026051 Msa0241470:intron 40.0%
CACCCGAAACACTTTCAATT+TGG + chr2_2:17026078-17026097 Msa0241470:intron 40.0%
CACAAATCATACACTCTGAG+AGG - chr2_2:17026602-17026621 None:intergenic 40.0%
! CAGAGTGTATGATTTGTGAG+AGG + chr2_2:17026604-17026623 Msa0241470:intron 40.0%
AGCCGATTATGATAGGGATA+AGG + chr2_2:17026841-17026860 Msa0241470:CDS 40.0%
TGCCGTGAATGAGAAAAAGA+AGG + chr2_2:17026928-17026947 Msa0241470:CDS 40.0%
GATGCAGCTTTCCAAAATTG+AGG + chr2_2:17026982-17027001 Msa0241470:CDS 40.0%
TTCCAAAATTGAGGCAGAGA+AGG + chr2_2:17026991-17027010 Msa0241470:CDS 40.0%
AGAAGCTCTTAGTGGAGAAA+AGG + chr2_2:17027134-17027153 Msa0241470:CDS 40.0%
GATGAAAAAAGCTCAAGAGC+AGG + chr2_2:17027171-17027190 Msa0241470:CDS 40.0%
TTGAAAAACAGAAGGCTGCT+AGG + chr2_2:17027200-17027219 Msa0241470:CDS 40.0%
TGAAAAACAGAAGGCTGCTA+GGG + chr2_2:17027201-17027220 Msa0241470:CDS 40.0%
! AGCAAGATGTTTTGCTTCGT+TGG - chr2_2:17027281-17027300 None:intergenic 40.0%
AATTACGTGCAAAGCATGCA+AGG + chr2_2:17027473-17027492 Msa0241470:CDS 40.0%
ATTACGTGCAAAGCATGCAA+GGG + chr2_2:17027474-17027493 Msa0241470:CDS 40.0%
GGAAGAAGTTTGAGCATGAA+AGG + chr2_2:17027515-17027534 Msa0241470:CDS 40.0%
AGGATGCATCCAGCATATTA+AGG - chr2_2:17027630-17027649 None:intergenic 40.0%
!! AAGTATACACGGACTAGCTA+AGG + chr2_2:17027666-17027685 Msa0241470:CDS 40.0%
TGTATCCTTTCATCACACCA+TGG + chr2_2:17027754-17027773 Msa0241470:intron 40.0%
TTTCAAAGCCTTGCAGCATA+AGG + chr2_2:17028622-17028641 Msa0241470:CDS 40.0%
TTGGTGCATGCGATTCTTTA+AGG + chr2_2:17028646-17028665 Msa0241470:CDS 40.0%
TCAGATATAGCAAGAAGTGG+AGG - chr2_2:17028687-17028706 None:intergenic 40.0%
CCTTCAGATATAGCAAGAAG+TGG - chr2_2:17028690-17028709 None:intergenic 40.0%
! CCACTTCTTGCTATATCTGA+AGG + chr2_2:17028687-17028706 Msa0241470:CDS 40.0%
!! ACCAATACCTGTAATGGGTT+CGG - chr2_2:17028721-17028740 None:intergenic 40.0%
TCTAAATTGGAGCCTCTCAT+AGG + chr2_2:17028741-17028760 Msa0241470:CDS 40.0%
TCTTGCATTGAAGTTCTCCT+CGG - chr2_2:17028892-17028911 None:intergenic 40.0%
CCAATAACTGATCTGTCAGA+TGG - chr2_2:17028930-17028949 None:intergenic 40.0%
CCATCTGACAGATCAGTTAT+TGG + chr2_2:17028927-17028946 Msa0241470:CDS 40.0%
GAGAGATGGTTACTAATCAG+AGG + chr2_2:17029105-17029124 Msa0241470:CDS 40.0%
ATCTACATGCAGAGAATGAC+AGG + chr2_2:17029132-17029151 Msa0241470:CDS 40.0%
TCCAAAAGCTGTAGTCTATG+AGG + chr2_2:17029229-17029248 Msa0241470:CDS 40.0%
! TCCTCATAGACTACAGCTTT+TGG - chr2_2:17029233-17029252 None:intergenic 40.0%
! GGAAAAGATAGTGGTGACAA+GGG - chr2_2:17029437-17029456 None:intergenic 40.0%
CGAGACTGAAACATTTGCTT+TGG + chr2_2:17029457-17029476 Msa0241470:CDS 40.0%
AGTTCTTCACACAGACTTGT+TGG + chr2_2:17029505-17029524 Msa0241470:CDS 40.0%
TTTGCCCTGTGTTCATTACA+AGG - chr2_2:17029608-17029627 None:intergenic 40.0%
ACAAACTGATGTGAAGTTGC+AGG + chr2_2:17029637-17029656 Msa0241470:CDS 40.0%
! TTGGTCTCATAGTATCGGAT+AGG + chr2_2:17029741-17029760 Msa0241470:CDS 40.0%
! TGGTCTCATAGTATCGGATA+GGG + chr2_2:17029742-17029761 Msa0241470:CDS 40.0%
CTGCAAGAAGTTGTATAGCA+CGG + chr2_2:17029798-17029817 Msa0241470:CDS 40.0%
TGCAGTTTGGATACTCAAAC+TGG + chr2_2:17029821-17029840 Msa0241470:CDS 40.0%
GTTTGGATACTCAAACTGGA+TGG + chr2_2:17029825-17029844 Msa0241470:CDS 40.0%
ACATAACTTTAGGCCCCGTT+TGG - chr2_2:17025629-17025648 None:intergenic 45.0%
TGTCATTGCCGTGTCTGTAT+CGG - chr2_2:17025690-17025709 None:intergenic 45.0%
!! ACTCAACTGGTTCGAGTTGA+GGG - chr2_2:17025820-17025839 None:intergenic 45.0%
!! AACTCAACTGGTTCGAGTTG+AGG - chr2_2:17025821-17025840 None:intergenic 45.0%
ACACCTTCCATCAGATGTGT+CGG - chr2_2:17025853-17025872 None:intergenic 45.0%
TGTCAGTGTTGTGCCTGTAT+CGG + chr2_2:17025933-17025952 Msa0241470:intron 45.0%
!! CTATGATGAAGCACCGATAC+AGG - chr2_2:17025949-17025968 None:intergenic 45.0%
! CTGTATCGGTGCTTCATCAT+AGG + chr2_2:17025947-17025966 Msa0241470:intron 45.0%
! CTTGCAATACTCTGAGTTGG+TGG + chr2_2:17026373-17026392 Msa0241470:intron 45.0%
!! TGAGTTGGTGGTTATCCACT+GGG + chr2_2:17026385-17026404 Msa0241470:intron 45.0%
TGTAGTTTCTGCAGCATACC+AGG + chr2_2:17026652-17026671 Msa0241470:intron 45.0%
ACTGCATTGCAGCAGAAATG+TGG + chr2_2:17026776-17026795 Msa0241470:CDS 45.0%
ACAGGTGCTCAGGAAGAAAA+TGG + chr2_2:17026800-17026819 Msa0241470:CDS 45.0%
CAGGTGCTCAGGAAGAAAAT+GGG + chr2_2:17026801-17026820 Msa0241470:CDS 45.0%
AGGTGCTCAGGAAGAAAATG+GGG + chr2_2:17026802-17026821 Msa0241470:CDS 45.0%
GGAAGAAAATGGGGATGTGA+AGG + chr2_2:17026811-17026830 Msa0241470:CDS 45.0%
! AAGGGCTGATTCTGAGAAGA+AGG + chr2_2:17026904-17026923 Msa0241470:CDS 45.0%
TTGCTGAAGCCTATACTCCT+CGG - chr2_2:17027017-17027036 None:intergenic 45.0%
TAGGCTTCAGCAAGTTCGTT+TGG + chr2_2:17027024-17027043 Msa0241470:CDS 45.0%
GGCAGAGGTTGAAAAACAGA+AGG + chr2_2:17027192-17027211 Msa0241470:CDS 45.0%
! AGAGGCTTGCTCAAGATAAC+TGG + chr2_2:17027248-17027267 Msa0241470:CDS 45.0%
TCTTGCTTATCAGAGGTCTC+AGG + chr2_2:17027294-17027313 Msa0241470:CDS 45.0%
GAGGTCTCAGGAGTTATTGA+AGG + chr2_2:17027306-17027325 Msa0241470:CDS 45.0%
ATGTGCCATGGTGTGATGAA+AGG - chr2_2:17027762-17027781 None:intergenic 45.0%
CATCACACCATGGCACATAT+AGG + chr2_2:17027764-17027783 Msa0241470:intron 45.0%
CTAAAAGAGGACAGCTGCAA+TGG + chr2_2:17027881-17027900 Msa0241470:intron 45.0%
CAGCATTTGATTGGCAGAAG+AGG + chr2_2:17028011-17028030 Msa0241470:intron 45.0%
CAGAAGAGGAAGACAAATCC+TGG + chr2_2:17028025-17028044 Msa0241470:intron 45.0%
ACATCAGGTTTCTGCATGCT+TGG - chr2_2:17028543-17028562 None:intergenic 45.0%
TCAACAGAGCTGTGCATTTG+AGG - chr2_2:17028594-17028613 None:intergenic 45.0%
AAGCCTTGCAGCATAAGGAT+TGG + chr2_2:17028627-17028646 Msa0241470:CDS 45.0%
ACCGAACCCATTACAGGTAT+TGG + chr2_2:17028717-17028736 Msa0241470:CDS 45.0%
AAATTGGAGCCTCTCATAGG+AGG + chr2_2:17028744-17028763 Msa0241470:CDS 45.0%
!! AAGTTCTCCTCGGCTGATTT+TGG - chr2_2:17028882-17028901 None:intergenic 45.0%
! GATAAGCTCTCTGACTTGTG+TGG + chr2_2:17029041-17029060 Msa0241470:CDS 45.0%
ATGAACGAATCCGTTGAAGG+AGG + chr2_2:17029080-17029099 Msa0241470:CDS 45.0%
TGAACGAATCCGTTGAAGGA+GGG + chr2_2:17029081-17029100 Msa0241470:CDS 45.0%
GGAAAAAGCAGGTACTTCTG+TGG + chr2_2:17029184-17029203 Msa0241470:CDS 45.0%
GTAGTCTATGAGGATGCAGA+TGG + chr2_2:17029239-17029258 Msa0241470:CDS 45.0%
TCAAACTACTCAGGCATGCA+GGG + chr2_2:17029295-17029314 Msa0241470:CDS 45.0%
! GGGAAAAGATAGTGGTGACA+AGG - chr2_2:17029438-17029457 None:intergenic 45.0%
TCAGTCTCGGGAAAAGATAG+TGG - chr2_2:17029446-17029465 None:intergenic 45.0%
TAATGAACACAGGGCAAAGC+AGG + chr2_2:17029610-17029629 Msa0241470:CDS 45.0%
GTTGCAGGACACTCATTCTT+TGG + chr2_2:17029652-17029671 Msa0241470:CDS 45.0%
!! GATACATTTCTGGTGGAGAC+TGG + chr2_2:17029686-17029705 Msa0241470:CDS 45.0%
! TCTCATAGTATCGGATAGGG+AGG + chr2_2:17029745-17029764 Msa0241470:CDS 45.0%
TTGTATAGCACGGTGCAGTT+TGG + chr2_2:17029808-17029827 Msa0241470:CDS 45.0%
CATTCTGTCTGCAGTTGACA+TGG + chr2_2:17029859-17029878 Msa0241470:CDS 45.0%
!!! AAAATAAAATTATTGATTAA+GGG + chr2_2:17025403-17025422 Msa0241470:intron 5.0%
!!! AATATTTTATATAAATCTTA+TGG + chr2_2:17028258-17028277 Msa0241470:intron 5.0%
GGAAAATCACTGTTGCGCTG+AGG + chr2_2:17025062-17025081 Msa0241470:CDS 50.0%
GATTAAGGGCCCGTTTGGAT+TGG + chr2_2:17025417-17025436 Msa0241470:intron 50.0%
CGGTGTACACTCAACTCAAC+TGG - chr2_2:17025833-17025852 None:intergenic 50.0%
GTGTACACCGACACATCTGA+TGG + chr2_2:17025843-17025862 Msa0241470:intron 50.0%
ACACCGACACATCTGATGGA+AGG + chr2_2:17025847-17025866 Msa0241470:intron 50.0%
! CATCTGATGGAAGGTGTGTC+AGG + chr2_2:17025856-17025875 Msa0241470:intron 50.0%
TACAGGCACAACACTGACAC+TGG - chr2_2:17025932-17025951 None:intergenic 50.0%
!! CTGAGTTGGTGGTTATCCAC+TGG + chr2_2:17026384-17026403 Msa0241470:intron 50.0%
TCGCTCTCGCTAATTCTTCC+TGG - chr2_2:17026673-17026692 None:intergenic 50.0%
TTGCAGCAGAAATGTGGCAC+AGG + chr2_2:17026782-17026801 Msa0241470:CDS 50.0%
! GGCCTTCTCTGCCTCAATTT+TGG - chr2_2:17026996-17027015 None:intergenic 50.0%
AAAAGCTCAAGAGCAGGCAG+AGG + chr2_2:17027177-17027196 Msa0241470:CDS 50.0%
AGCATGCAGATGAGCAGAAG+AGG + chr2_2:17027230-17027249 Msa0241470:CDS 50.0%
ACTTCCAGCGACAGGTGAAA+AGG - chr2_2:17027650-17027669 None:intergenic 50.0%
! CCTGTCGCTGGAAGTATACA+CGG + chr2_2:17027655-17027674 Msa0241470:CDS 50.0%
! GCTGAAACTGCTGACTGAGT+TGG + chr2_2:17028082-17028101 Msa0241470:intron 50.0%
CAGAGTTGAGTCACGACATC+AGG - chr2_2:17028558-17028577 None:intergenic 50.0%
GTGACTCAACTCTGCAGTCT+AGG + chr2_2:17028564-17028583 Msa0241470:CDS 50.0%
GCACCAATCCTTATGCTGCA+AGG - chr2_2:17028633-17028652 None:intergenic 50.0%
CTGTTTGAGCCTCCTATGAG+AGG - chr2_2:17028756-17028775 None:intergenic 50.0%
!! ACTTGATGGGCTCACAGGAA+AGG + chr2_2:17028832-17028851 Msa0241470:CDS 50.0%
!! CTTGATGGGCTCACAGGAAA+GGG + chr2_2:17028833-17028852 Msa0241470:CDS 50.0%
!! TTGATGGGCTCACAGGAAAG+GGG + chr2_2:17028834-17028853 Msa0241470:CDS 50.0%
!!! CTCGGCTGATTTTGGTGATG+TGG - chr2_2:17028874-17028893 None:intergenic 50.0%
CACATCACCAAAATCAGCCG+AGG + chr2_2:17028872-17028891 Msa0241470:CDS 50.0%
CATCTCTCTCCCTCCTTCAA+CGG - chr2_2:17029093-17029112 None:intergenic 50.0%
CTCAAACTACTCAGGCATGC+AGG + chr2_2:17029294-17029313 Msa0241470:CDS 50.0%
! TTTCTGGTGGAGACTGGAAC+TGG + chr2_2:17029692-17029711 Msa0241470:CDS 50.0%
ACTCAAACTGGATGGGCAGT+TGG + chr2_2:17029833-17029852 Msa0241470:CDS 50.0%
TTCCTCGCTCGCGCTTCTAA+TGG + chr2_2:17024952-17024971 Msa0241470:five_prime_UTR 55.0%
GAATGCTTGTTCTGCCGCCA+TGG - chr2_2:17025028-17025047 None:intergenic 55.0%
TGGTGGTTATCCACTGGGAG+AGG + chr2_2:17026390-17026409 Msa0241470:intron 55.0%
ATCAGTGTGTCCTCTCCCAG+TGG - chr2_2:17026403-17026422 None:intergenic 55.0%
GAAATGTGGCACAGGTGCTC+AGG + chr2_2:17026790-17026809 Msa0241470:CDS 55.0%
AATTGAGGCAGAGAAGGCCG+AGG + chr2_2:17026997-17027016 Msa0241470:CDS 55.0%
! CAGAGAAGGCCGAGGAGTAT+AGG + chr2_2:17027005-17027024 Msa0241470:CDS 55.0%
! GCATCCTTTTCACCTGTCGC+TGG + chr2_2:17027643-17027662 Msa0241470:CDS 55.0%
CCGTGTATACTTCCAGCGAC+AGG - chr2_2:17027658-17027677 None:intergenic 55.0%
!! TGCACACTTGATGGGCTCAC+AGG + chr2_2:17028827-17028846 Msa0241470:CDS 55.0%
CGTTGAAGGAGGGAGAGAGA+TGG + chr2_2:17029091-17029110 Msa0241470:CDS 55.0%
CTCGCTCGCGCTTCTAATGG+CGG + chr2_2:17024955-17024974 Msa0241470:five_prime_UTR 60.0%
! CGCCATTAGAAGCGCGAGCG+AGG - chr2_2:17024957-17024976 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 17024863 17029904 17024863 ID=Msa0241470;Name=Msa0241470
chr2_2 mRNA 17024863 17029904 17024863 ID=Msa0241470-mRNA-1;Parent=Msa0241470;Name=Msa0241470-mRNA-1;_AED=0.08;_eAED=0.08;_QI=164|1|0.75|1|1|1|4|0|859
chr2_2 exon 17024863 17025083 17024863 ID=Msa0241470-mRNA-1:exon:7038;Parent=Msa0241470-mRNA-1
chr2_2 exon 17025195 17025309 17025195 ID=Msa0241470-mRNA-1:exon:7039;Parent=Msa0241470-mRNA-1
chr2_2 exon 17026657 17027687 17026657 ID=Msa0241470-mRNA-1:exon:7040;Parent=Msa0241470-mRNA-1
chr2_2 exon 17028528 17029904 17028528 ID=Msa0241470-mRNA-1:exon:7041;Parent=Msa0241470-mRNA-1
chr2_2 five_prime_UTR 17024863 17025026 17024863 ID=Msa0241470-mRNA-1:five_prime_utr;Parent=Msa0241470-mRNA-1
chr2_2 CDS 17025027 17025083 17025027 ID=Msa0241470-mRNA-1:cds;Parent=Msa0241470-mRNA-1
chr2_2 CDS 17025195 17025309 17025195 ID=Msa0241470-mRNA-1:cds;Parent=Msa0241470-mRNA-1
chr2_2 CDS 17026657 17027687 17026657 ID=Msa0241470-mRNA-1:cds;Parent=Msa0241470-mRNA-1
chr2_2 CDS 17028528 17029904 17028528 ID=Msa0241470-mRNA-1:cds;Parent=Msa0241470-mRNA-1
Gene Sequence

>Msa0241470

ATGGCGGCAGAACAAGCATTCAATCCTTCTGAATCGGAAAATCACTGTTGCGCTGAGTTGAAGAAAAAGTATTCCAAGTTTCAAGAATCACGAAATGCTCTACGTGAAGCTGTTAAATTACTTGAACGAAAGGTGAATGAGTACAAAGCTGAAAATGCTAATCTCAAAAAAGTTTCTGCAGCATACCAGGAAGAATTAGCGAGAGCGAAAATTGAAAAAGAGGAAAATCTTAAAGAACTCAATGCTAAGGTTTCTTTAGAGAATGAAGTTTCTGCCTTAAAATCTGAGATCACTGCATTGCAGCAGAAATGTGGCACAGGTGCTCAGGAAGAAAATGGGGATGTGAAGGCTTTGAAAGCCGATTATGATAGGGATAAGGAAATTGAAAGATTGAAGAAACTTGTGGAGAAAGAAAAGAAAAGGGCTGATTCTGAGAAGAAGGTTGCCGTGAATGAGAAAAAGAAGGCTGCTGAAGCTAGTAAGTTATTGGATAAGGGGATGCAGCTTTCCAAAATTGAGGCAGAGAAGGCCGAGGAGTATAGGCTTCAGCAAGTTCGTTTGGAGAAAGAAGTTACTGAAACAAAAATGAAGTTGGCTTCTGAGTTGTCAAAGTTTGAAGAGGCAATCAAAAGAGTTGAAACTGAAAAACAGAAGCTCTTAGTGGAGAAAAGGAATGCAGAGTCAAAGATGAAAAAAGCTCAAGAGCAGGCAGAGGTTGAAAAACAGAAGGCTGCTAGGGAAAAGCAGCATGCAGATGAGCAGAAGAGGCTTGCTCAAGATAACTGGACGAGCGCCAACGAAGCAAAACATCTTGCTTATCAGAGGTCTCAGGAGTTATTGAAGGATAAGAAGGTAATTGAGGATTTGAAGCAGAAGATACACGAACTTTCATCACCAAGAAAACCCAATGAAATATCTGGAGTATCTCCTAATGTGAATGCTGAAAGTGATAAAATACACTTTCTGAAAAGCAGTTTAGAGCTTGAAAAATTACGTGCAAAGCATGCAAGGGAAAAGTTAAAACATGAAAGGAAGAAGTTTGAGCATGAAAGGATGAAGTTTAAATACGAAGAAAGTTGTCGTAGCATTTTACAGCATGAATTGCACCGTTTAAAGCTTGATTTTATTCAAAACTACAATCACCTTAATATGCTGGATGCATCCTTTTCACCTGTCGCTGGAAGTATACACGGACTAGCTAAGTCTCAAAATAAGCCAAGCATGCAGAAACCTGATGTCGTGACTCAACTCTGCAGTCTAGGTATGCCTCAAATGCACAGCTCTGTTGAAAATGAACTTTCAAAGCCTTGCAGCATAAGGATTGGTGCATGCGATTCTTTAAGGAAAAGCATGCAGAGTCCTCCACTTCTTGCTATATCTGAAGGGAATTATACCGAACCCATTACAGGTATTGGTTCTAAATTGGAGCCTCTCATAGGAGGCTCAAACAGAACATCGATACAGAGTTATGCAGTAAATTCTAGTACAGCATCTTTTTCTGATGCACACTTGATGGGCTCACAGGAAAGGGGTGCTTTGCAAGTTACCACATCACCAAAATCAGCCGAGGAGAACTTCAATGCAAGATCAAGCATGTTGAAACCATCTGACAGATCAGTTATTGGTCATGATGGAATAAGGAATAGGATTTCTGATACAATCGAATGTGTTGCAAATTTGTCTTCTGAGGGTAAGAAGTTAAACATGCAGCTAGAAGATAAGCTCTCTGACTTGTGTGGTTTATTGTACGACAAAATGAACGAATCCGTTGAAGGAGGGAGAGAGATGGTTACTAATCAGAGGGACAATCTACATGCAGAGAATGACAGGCCCCATAAGAAGAGAAAGAAATCTCATAGGGAAAAAGCAGGTACTTCTGTGGATGAGAAAAAGAAAACAGAAGATCCAAAAGCTGTAGTCTATGAGGATGCAGATGGCTTCAAACAAACTAGCTGTCCTGCATTATATGCTCAAACTACTCAGGCATGCAGGGAGAAGATATTTGATGCCTCAAACAACTTTGATGAAATATATAATGGAAATGTTATGAAGTTGTTAGTCTTAGAAAATGCTGTTGATGAGGAACGCTATAGCATAGCGATGAATGCACCCTTGTCACCACTATCTTTTCCCGAGACTGAAACATTTGCTTTGGATAATATGGAGCCTTTTCAGAATGAAGTTCTTCACACAGACTTGTTGGACCAAAGAGATTCATCTCCTTCAACTAGATGTGATGTCATTGATGTTGAGATGAATTCCAATGATGCATTTGCAATTCCTTGTAATGAACACAGGGCAAAGCAGGCTGTACAAACTGATGTGAAGTTGCAGGACACTCATTCTTTGGAAAATTTAAGGGATACATTTCTGGTGGAGACTGGAACTGGATCTTTACAGCATCAACTTCCTAATTTTGGTCTCATAGTATCGGATAGGGAGGATAATAGTTGCATATCTAGGACACTTCTTGCTGCAAGAAGTTGTATAGCACGGTGCAGTTTGGATACTCAAACTGGATGGGCAGTTGGTAGCATTCTGTCTGCAGTTGACATGGAAGAAATATCCATACAAAAGTAA

Protein sequence

>Msa0241470

MAAEQAFNPSESENHCCAELKKKYSKFQESRNALREAVKLLERKVNEYKAENANLKKVSAAYQEELARAKIEKEENLKELNAKVSLENEVSALKSEITALQQKCGTGAQEENGDVKALKADYDRDKEIERLKKLVEKEKKRADSEKKVAVNEKKKAAEASKLLDKGMQLSKIEAEKAEEYRLQQVRLEKEVTETKMKLASELSKFEEAIKRVETEKQKLLVEKRNAESKMKKAQEQAEVEKQKAAREKQHADEQKRLAQDNWTSANEAKHLAYQRSQELLKDKKVIEDLKQKIHELSSPRKPNEISGVSPNVNAESDKIHFLKSSLELEKLRAKHAREKLKHERKKFEHERMKFKYEESCRSILQHELHRLKLDFIQNYNHLNMLDASFSPVAGSIHGLAKSQNKPSMQKPDVVTQLCSLGMPQMHSSVENELSKPCSIRIGACDSLRKSMQSPPLLAISEGNYTEPITGIGSKLEPLIGGSNRTSIQSYAVNSSTASFSDAHLMGSQERGALQVTTSPKSAEENFNARSSMLKPSDRSVIGHDGIRNRISDTIECVANLSSEGKKLNMQLEDKLSDLCGLLYDKMNESVEGGREMVTNQRDNLHAENDRPHKKRKKSHREKAGTSVDEKKKTEDPKAVVYEDADGFKQTSCPALYAQTTQACREKIFDASNNFDEIYNGNVMKLLVLENAVDEERYSIAMNAPLSPLSFPETETFALDNMEPFQNEVLHTDLLDQRDSSPSTRCDVIDVEMNSNDAFAIPCNEHRAKQAVQTDVKLQDTHSLENLRDTFLVETGTGSLQHQLPNFGLIVSDREDNSCISRTLLAARSCIARCSLDTQTGWAVGSILSAVDMEEISIQK*