AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1179930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1179930 MtrunA17_Chr8g0341551 88.029 827 86 2 164 979 24 848 0.0 1467
Msa1179930 MtrunA17_Chr8g0341581 76.325 604 122 3 396 979 333 935 0.0 904
Msa1179930 MtrunA17_Chr8g0341581 60.000 175 48 5 250 403 1 174 1.09e-45 178
Msa1179930 MtrunA17_Chr8g0341541 51.142 219 29 6 6 168 39 235 1.08e-38 154
Msa1179930 MtrunA17_Chr8g0341561 68.627 102 22 2 63 164 1 92 5.55e-31 117
Msa1179930 MtrunA17_Chr1g0154531 71.014 69 17 1 401 466 252 320 1.09e-17 85.5
Msa1179930 MtrunA17_Chr8g0341571 85.714 42 6 0 6 47 39 80 1.65e-16 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1179930 AT3G21290.1 30.248 605 331 18 399 977 650 1189 2.08e-47 184
Msa1179930 AT3G21290.1 46.154 78 39 2 273 349 338 413 6.06e-11 67.4
Msa1179930 AT3G21290.2 30.579 605 329 19 399 977 461 1000 2.65e-47 184
Msa1179930 AT3G21290.2 46.154 78 39 2 273 349 149 224 4.78e-11 67.4
Msa1179930 AT1G51720.4 41.096 219 51 6 6 168 39 235 2.25e-27 117
Msa1179930 AT1G51720.2 41.096 219 51 6 6 168 39 235 4.39e-27 117
Msa1179930 AT1G51720.1 41.096 219 51 6 6 168 39 235 6.65e-27 117
Msa1179930 AT1G51720.3 41.096 219 51 6 6 168 39 235 6.65e-27 117

Find 227 sgRNAs with CRISPR-Local

Find 604 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAAGCCTGTTTATGTAAA+AGG 0.173577 8_1:+13663657 Msa1179930:CDS
GTTAAATCCTCCACTGTTAA+TGG 0.178531 8_1:+13669821 Msa1179930:CDS
TTACATTTATTAGATGTATT+TGG 0.193983 8_1:+13671347 Msa1179930:three_prime_UTR
ATTTATCCGGAATTTGAAAA+AGG 0.195954 8_1:-13671443 None:intergenic
ACGGCATTGCAACACAAATT+AGG 0.198017 8_1:+13670895 Msa1179930:CDS
ATGCCTGACTGTATCCTTTC+TGG 0.207056 8_1:-13669397 None:intergenic
AGGATAACTCTTTCTTCTTT+TGG 0.207067 8_1:-13670420 None:intergenic
TCAATACCACGGCTCATTTC+TGG 0.212870 8_1:-13670220 None:intergenic
TTGAAAACAACTTTGGATTC+TGG 0.250712 8_1:+13670025 Msa1179930:CDS
AATGGGCAGATACTTATAAA+TGG 0.255985 8_1:+13663433 Msa1179930:CDS
TTGACATCAATCCAAATCTA+TGG 0.263751 8_1:-13668100 None:intergenic
TTCTTGAAGCTACACTAAAA+AGG 0.266324 8_1:+13664704 Msa1179930:CDS
GTCATTTGGAACTTCCTCTT+TGG 0.270270 8_1:-13668970 None:intergenic
AAGCTTTCTGAATCCACTTC+TGG 0.273625 8_1:-13668650 None:intergenic
GTTATAGGTCCCTTTAATTC+AGG 0.275218 8_1:-13670487 None:intergenic
AAAGGAGGAACCTGAATTAA+AGG 0.288377 8_1:+13670477 Msa1179930:CDS
AGAGCTTTCAGACTTGGATT+TGG 0.288726 8_1:+13669865 Msa1179930:CDS
AAGGAAGAATTACGATAAAA+TGG 0.290031 8_1:+13667883 Msa1179930:CDS
GGCTTTAAAATATACCTTCC+AGG 0.292024 8_1:-13668629 None:intergenic
AACATTCTCTGCAAATCTAT+TGG 0.292811 8_1:-13668287 None:intergenic
GTGAAGACATTCTTAGATAA+TGG 0.294676 8_1:+13663285 Msa1179930:CDS
CTCAATCTCTGACTTTGTTA+TGG 0.297662 8_1:+13664365 Msa1179930:CDS
GAAGGAGCGCAAAAGTTATA+TGG 0.297964 8_1:+13669094 Msa1179930:CDS
TGAAATGGTTGGTAAGTTAA+AGG 0.299635 8_1:+13669733 Msa1179930:CDS
AAATGGTTCGTTTAAACATA+TGG 0.303322 8_1:+13669943 Msa1179930:CDS
CTTTGCAACAATGGTTTCTT+CGG 0.310288 8_1:-13669909 None:intergenic
GTTGGAGGCTCCCATAGATT+TGG 0.313915 8_1:+13668089 Msa1179930:intron
GGTACAGATGTGAAAATGTT+TGG 0.314198 8_1:+13669293 Msa1179930:CDS
CTCTTCATGGACGGGTTCCC+AGG 0.320343 8_1:-13667667 None:intergenic
ACAGGTGAAAAGGAAGAAAA+TGG 0.334018 8_1:+13663389 Msa1179930:CDS
GAGCTTTCAGACTTGGATTT+GGG 0.337923 8_1:+13669866 Msa1179930:CDS
GTATTTGCAAATAGAAATAA+TGG 0.339653 8_1:+13670394 Msa1179930:CDS
ATTTGCAGGCACTCTTCTAT+TGG 0.343063 8_1:-13670263 None:intergenic
TGCCTTTATCTGGCTCTTCA+TGG 0.345411 8_1:-13667680 None:intergenic
TCTTATGTTTACCTTTAGAT+AGG 0.350397 8_1:-13669181 None:intergenic
GGCACCTCTTCACGTGAATT+AGG 0.352435 8_1:-13670352 None:intergenic
GTTTCCTCCAAATCGTCATT+TGG 0.357367 8_1:-13668984 None:intergenic
AAGGGTTTCCTAGAGGTCTT+TGG 0.361231 8_1:-13669472 None:intergenic
GGCCTCCCAAGACGAAATTA+TGG 0.363858 8_1:+13663626 Msa1179930:CDS
TTAAATCCTCCACTGTTAAT+GGG 0.365396 8_1:+13669822 Msa1179930:CDS
CGGCATTGCAACACAAATTA+GGG 0.367284 8_1:+13670896 Msa1179930:CDS
ACCTTTATTGAAAACAACTT+TGG 0.367488 8_1:+13670018 Msa1179930:CDS
TCTTGCTTAGATCTATTTGC+AGG 0.374707 8_1:-13670277 None:intergenic
GCAAAGCAATTTGAACGAAA+TGG 0.377485 8_1:+13669926 Msa1179930:CDS
TTCCTTCAAAATCTTGTGTA+AGG 0.384924 8_1:-13670699 None:intergenic
TCTTAATCTTGACTTCTTTG+AGG 0.385510 8_1:+13664392 Msa1179930:CDS
TCGGGCCATAATTTCGTCTT+GGG 0.390215 8_1:-13663631 None:intergenic
ACAAGGTACGCAGTCACATT+TGG 0.393123 8_1:+13669763 Msa1179930:CDS
GGAAGTTCCAAATGACGATT+TGG 0.394070 8_1:+13668977 Msa1179930:CDS
CAGCTGCCAATGCCTTTATC+TGG 0.394114 8_1:-13667690 None:intergenic
TGTATCTTACTTTCTTTCAC+AGG 0.395304 8_1:-13670325 None:intergenic
AATGGAAGAGGCTGGACTTA+AGG 0.399312 8_1:+13667901 Msa1179930:CDS
CCAACCTCGGTATTAAGTTC+AGG 0.399713 8_1:+13670052 Msa1179930:CDS
AATGAGCCGTGGTATTGATT+TGG 0.399752 8_1:+13670225 Msa1179930:CDS
AGAGCCATTGACTTGGAGCC+TGG 0.402129 8_1:+13667649 Msa1179930:intron
GGAGAGGACGATCCTTCATT+TGG 0.406683 8_1:+13663312 Msa1179930:CDS
ACTACCATCCCTGAAATTCC+TGG 0.406859 8_1:-13669657 None:intergenic
GGGGAGTTTGTTTGATGAAA+GGG 0.408856 8_1:+13669115 Msa1179930:CDS
GAATGTTAATTTCTCTCCTA+AGG 0.409134 8_1:+13668303 Msa1179930:CDS
GTCCATGAAGAGCCAGATAA+AGG 0.409848 8_1:+13667678 Msa1179930:CDS
GTATTGATTTGGATGGTTGC+AGG 0.410847 8_1:+13670236 Msa1179930:CDS
TTCCTTTGCTTGCCCTGGTA+GGG 0.412398 8_1:-13668250 None:intergenic
GTTTGATTCTTCTTTCACTT+TGG 0.412549 8_1:-13669021 None:intergenic
TAATAGTTTGCTTCATAAAG+AGG 0.415011 8_1:+13663587 Msa1179930:CDS
TCATGCGGTCGAGTTCATTC+AGG 0.415859 8_1:+13664732 Msa1179930:CDS
GGATACAGTCAGGCATTGTC+TGG 0.418533 8_1:+13669404 Msa1179930:CDS
TTCAAATTGCTTTGCAACAA+TGG 0.421556 8_1:-13669918 None:intergenic
AGGGCAAGCAAAGGAAATAA+TGG 0.422038 8_1:+13668257 Msa1179930:CDS
GTGAAAGCACAAGGCACAAC+AGG 0.430221 8_1:+13669525 Msa1179930:CDS
GTCGGGCCATAATTTCGTCT+TGG 0.430504 8_1:-13663632 None:intergenic
TATCTAAAGGTAAACATAAG+AGG 0.431160 8_1:+13669183 Msa1179930:CDS
AATGGTTCGTTTAAACATAT+GGG 0.431845 8_1:+13669944 Msa1179930:CDS
TTTGCAACAATGGTTTCTTC+GGG 0.433287 8_1:-13669908 None:intergenic
ACCGAATCCTTTCTTCCATC+AGG 0.434761 8_1:-13670373 None:intergenic
TAAGAGAGAGCTTTCAGACT+TGG 0.434843 8_1:+13669859 Msa1179930:CDS
GTACAGATGTGAAAATGTTT+GGG 0.435714 8_1:+13669294 Msa1179930:CDS
CTCATACTCAACAGGTGAAA+AGG 0.436078 8_1:+13663379 Msa1179930:CDS
TTTCCTTTGCTTGCCCTGGT+AGG 0.437033 8_1:-13668251 None:intergenic
TTTATCTGGCTCTTCATGGA+CGG 0.439452 8_1:-13667676 None:intergenic
CCGTGAAGAACGTTTGCCCT+TGG 0.441672 8_1:-13668135 None:intergenic
CTCTTATTCAAAGTTTGAAA+AGG 0.443955 8_1:+13670459 Msa1179930:CDS
AGAATATGTGCAGGATTACC+AGG 0.445496 8_1:+13670655 Msa1179930:CDS
TTCCGTTAGGGTTATCCCTT+AGG 0.447956 8_1:-13668319 None:intergenic
AGATTTGTCTCATACTCAAC+AGG 0.452612 8_1:+13663371 Msa1179930:CDS
AACTATTATTGTATTCTTCG+AGG 0.452851 8_1:-13663572 None:intergenic
CATAAACAGGCTTGTATTGT+CGG 0.454422 8_1:-13663650 None:intergenic
ACCTCAAAAGTCATTCCGTT+AGG 0.455562 8_1:-13668332 None:intergenic
CGAGTTCATTCAGGCAATCC+AGG 0.456450 8_1:+13664741 Msa1179930:CDS
AAGGAGCGCAAAAGTTATAT+GGG 0.456627 8_1:+13669095 Msa1179930:CDS
TTACTTTCTTTCACAGGGTA+GGG 0.458346 8_1:-13670319 None:intergenic
CAAGAGCTTGAACTACCTCC+TGG 0.464257 8_1:-13664759 None:intergenic
TGCAATCGTGGTTTCCAGAA+AGG 0.466804 8_1:+13669383 Msa1179930:CDS
TATTGTGCTTCATGAAGAAC+TGG 0.468321 8_1:+13671134 Msa1179930:CDS
AATGTGACTGCGTACCTTGT+CGG 0.468490 8_1:-13669760 None:intergenic
TTATCTGGCTCTTCATGGAC+GGG 0.469150 8_1:-13667675 None:intergenic
CACAAATTAGGGAATCCTAT+AGG 0.471035 8_1:+13670907 Msa1179930:CDS
TACCGATCCGCATTGCCTAT+AGG 0.473587 8_1:-13670922 None:intergenic
ACAATTTCTTCACCAAATGA+AGG 0.476033 8_1:-13663324 None:intergenic
ATTATTTCCTTTGCTTGCCC+TGG 0.482147 8_1:-13668255 None:intergenic
TTGTACTACATCAGCTCCAC+AGG 0.483865 8_1:+13668938 Msa1179930:CDS
GTCAATAAGTGCTACTGCCA+AGG 0.484243 8_1:+13668118 Msa1179930:CDS
AAAACAATACAACATTTATC+CGG 0.484770 8_1:-13671456 None:intergenic
GTGATGGCACAACATCATAA+AGG 0.486404 8_1:-13668181 None:intergenic
TGGGGAGTTTGTTTGATGAA+AGG 0.488167 8_1:+13669114 Msa1179930:CDS
GAGTCTTCAGTAAGTTCAAA+TGG 0.488966 8_1:-13669335 None:intergenic
AAGGAGGAACCTGAATTAAA+GGG 0.489126 8_1:+13670478 Msa1179930:CDS
AGGAAACCCTTCCTATCCAT+TGG 0.492029 8_1:+13669484 Msa1179930:CDS
AACAATGGTTTCTTCGGGAG+TGG 0.492458 8_1:-13669903 None:intergenic
GCCTGATGGAAGAAAGGATT+CGG 0.492807 8_1:+13670372 Msa1179930:CDS
TTCAAGAAACCTACTGAAAG+TGG 0.492887 8_1:+13668671 Msa1179930:CDS
ATGGGCAGATACTTATAAAT+GGG 0.495944 8_1:+13663434 Msa1179930:CDS
CTACCATCCCTGAAATTCCT+GGG 0.502637 8_1:-13669656 None:intergenic
TCCTCCACTGTTAATGGGCG+AGG 0.503211 8_1:+13669827 Msa1179930:CDS
CTCAGGGATAACAACAGAAC+TGG 0.503518 8_1:+13669794 Msa1179930:CDS
TTTGTGTTGTCCAAAATGCT+AGG 0.504612 8_1:-13670079 None:intergenic
CAACAGGAAACACACAGGAC+AGG 0.508670 8_1:+13669541 Msa1179930:CDS
CCTCAAAAGTCATTCCGTTA+GGG 0.508736 8_1:-13668331 None:intergenic
TACGATAAAATGGAAGAGGC+TGG 0.509401 8_1:+13667893 Msa1179930:CDS
AATGAAGGATCGTCCTCTCC+AGG 0.510240 8_1:-13663309 None:intergenic
ATCTAAAGGTAAACATAAGA+GGG 0.510952 8_1:+13669184 Msa1179930:CDS
GCTTTAAAATATACCTTCCA+GGG 0.513152 8_1:-13668628 None:intergenic
AGGGTTGAGTTTCAGAAACT+AGG 0.515836 8_1:+13670825 Msa1179930:intron
CCAAGGGCAAACGTTCTTCA+CGG 0.516971 8_1:+13668135 Msa1179930:CDS
ATAAACAGGCTTGTATTGTC+GGG 0.518253 8_1:-13663649 None:intergenic
CACACATCCAAGTTTCATAC+AGG 0.519016 8_1:+13668489 Msa1179930:CDS
TGCTTGTCTGTCATTCGTGA+TGG 0.519371 8_1:-13668197 None:intergenic
AGAAAATGGTTGTTAAAAGA+CGG 0.519561 8_1:+13663403 Msa1179930:CDS
TAAAAGACGGAGAGAGGAAT+GGG 0.521660 8_1:+13663416 Msa1179930:CDS
AGAGGCTCTTCGTCTTCAAT+CGG 0.522456 8_1:+13663605 Msa1179930:CDS
AAGCTCTTGAGAGAGTCATC+AGG 0.528546 8_1:+13664773 Msa1179930:CDS
GTTCCCAGGCTCCAAGTCAA+TGG 0.531249 8_1:-13667653 None:intergenic
ACTATTATTGTATTCTTCGA+GGG 0.531586 8_1:-13663571 None:intergenic
TTACGATAGAGCCATTGACT+TGG 0.534203 8_1:+13667642 Msa1179930:intron
CTTACTTTCTTTCACAGGGT+AGG 0.535379 8_1:-13670320 None:intergenic
CCTGAACTTAATACCGAGGT+TGG 0.536440 8_1:-13670052 None:intergenic
TTATTCAAAGTTTGAAAAGG+AGG 0.536538 8_1:+13670462 Msa1179930:CDS
GACTTCTTTGAGGTTCCACA+AGG 0.540563 8_1:+13664402 Msa1179930:CDS
AAGGCATTGGCAGCTGATGA+AGG 0.543539 8_1:+13667697 Msa1179930:CDS
AACACCTAATTCACGTGAAG+AGG 0.543666 8_1:+13670348 Msa1179930:CDS
AGAGGTGCCTGATGGAAGAA+AGG 0.543673 8_1:+13670366 Msa1179930:CDS
TCAAGATCCTGTATGAAACT+TGG 0.544273 8_1:-13668496 None:intergenic
GCAAGATACAAAACATGGAA+TGG 0.545271 8_1:+13670294 Msa1179930:CDS
GGTTGTTAAAAGACGGAGAG+AGG 0.545436 8_1:+13663410 Msa1179930:CDS
TTAGAGAATGCTAAAAGCAA+GGG 0.546685 8_1:+13670855 Msa1179930:CDS
AATGTTAATTTCTCTCCTAA+GGG 0.547049 8_1:+13668304 Msa1179930:CDS
GTGAAGTCACGGATAGCTCT+AGG 0.549205 8_1:+13669141 Msa1179930:CDS
ATCCTATAGGCAATGCGGAT+CGG 0.549244 8_1:+13670920 Msa1179930:CDS
CAGATTGCAAAATATATCCC+TGG 0.549346 8_1:+13668611 Msa1179930:intron
AAAGCAGACAGCGCGAACGT+TGG 0.549641 8_1:+13670181 Msa1179930:CDS
AAAAGTCCCCAGGAATTTCA+GGG 0.555998 8_1:+13669649 Msa1179930:CDS
ACTCGTGAATCATATTCTCT+AGG 0.559267 8_1:+13669272 Msa1179930:CDS
GAAGAGCCAGATAAAGGCAT+TGG 0.560331 8_1:+13667684 Msa1179930:CDS
AGTTCCAAATGACGATTTGG+AGG 0.560361 8_1:+13668980 Msa1179930:CDS
TGACATCAATCCAAATCTAT+GGG 0.560951 8_1:-13668099 None:intergenic
TAGATATAAAGAATATGTGC+AGG 0.561399 8_1:+13670646 Msa1179930:intron
AGGGAAGTGGAAACTCTTCA+AGG 0.563795 8_1:+13667926 Msa1179930:CDS
GAGCCATTGACTTGGAGCCT+GGG 0.564055 8_1:+13667650 Msa1179930:intron
TTTAGAGAATGCTAAAAGCA+AGG 0.564095 8_1:+13670854 Msa1179930:CDS
GGCCATAATTTCGTCTTGGG+AGG 0.564695 8_1:-13663628 None:intergenic
CAAAAGAAACTTCATGTGTA+CGG 0.567423 8_1:-13669568 None:intergenic
TTGAGAAAGAAATCCCTACC+AGG 0.568222 8_1:+13668237 Msa1179930:CDS
CAGTCTGATAGCCTATCTAA+AGG 0.569155 8_1:+13669170 Msa1179930:CDS
ACATCAGCTCCACAGGGAAG+AGG 0.573845 8_1:+13668945 Msa1179930:CDS
GTCACTGACTACTTTCTCCA+AGG 0.574553 8_1:-13668467 None:intergenic
GAATTACGATAAAATGGAAG+AGG 0.574680 8_1:+13667889 Msa1179930:CDS
TATTGATTTGGATGGTTGCA+GGG 0.575522 8_1:+13670237 Msa1179930:CDS
AACATTGATGAGAAATCTGA+AGG 0.576151 8_1:+13669221 Msa1179930:CDS
AAACAACTTTGGATTCTGGA+AGG 0.579277 8_1:+13670029 Msa1179930:CDS
TTAAAAGACGGAGAGAGGAA+TGG 0.579738 8_1:+13663415 Msa1179930:CDS
TCACGTGAAGAGGTGCCTGA+TGG 0.580927 8_1:+13670358 Msa1179930:CDS
TGGACTTAAGGAAAGGGAAG+TGG 0.582283 8_1:+13667913 Msa1179930:CDS
AGAGGCTGGACTTAAGGAAA+GGG 0.582567 8_1:+13667907 Msa1179930:CDS
GAAAGAAGAATCAAACACAT+TGG 0.583451 8_1:+13669028 Msa1179930:CDS
ACATTCTTAGATAATGGACC+TGG 0.584938 8_1:+13663291 Msa1179930:CDS
AAATGTAATTACTTATGCAT+AGG 0.587387 8_1:+13671393 Msa1179930:three_prime_UTR
ATCCCTACCAGGGCAAGCAA+AGG 0.588238 8_1:+13668248 Msa1179930:CDS
CTCCTAAGGGATAACCCTAA+CGG 0.588556 8_1:+13668317 Msa1179930:CDS
TTTCCAGAAAGGATACAGTC+AGG 0.589711 8_1:+13669394 Msa1179930:CDS
TCTTTGGAACCTCTTCCCTG+TGG 0.592959 8_1:-13668954 None:intergenic
GTATCTTACTTTCTTTCACA+GGG 0.594347 8_1:-13670324 None:intergenic
AGGTACCTTCCACTTTCAGT+AGG 0.595336 8_1:-13668680 None:intergenic
ACATGATTATCAACAGCTGA+AGG 0.598984 8_1:+13669076 Msa1179930:CDS
TGAGAAAGAAATCCCTACCA+GGG 0.599233 8_1:+13668238 Msa1179930:CDS
TCAATAAGTGCTACTGCCAA+GGG 0.601074 8_1:+13668119 Msa1179930:CDS
TGAAAGGGAAAGTGAAGTCA+CGG 0.603338 8_1:+13669130 Msa1179930:CDS
TTTGAACTTACTGAAGACTC+TGG 0.604563 8_1:+13669338 Msa1179930:CDS
AAGTTAAAGGAAGGCCGACA+AGG 0.609269 8_1:+13669746 Msa1179930:CDS
AGCCGTGGTATTGATTTGGA+TGG 0.609459 8_1:+13670229 Msa1179930:CDS
GGGGATAAGGATAGATATGA+CGG 0.609668 8_1:+13670876 Msa1179930:CDS
AATCAAAGCAAACACTTCAG+AGG 0.610844 8_1:+13669967 Msa1179930:CDS
AAAGAAGAAAGAGTTATCCT+CGG 0.615874 8_1:+13670423 Msa1179930:CDS
CTTAGATAATGGACCTGGAG+AGG 0.616199 8_1:+13663296 Msa1179930:CDS
ACCTCGCCCATTAACAGTGG+AGG 0.616632 8_1:-13669828 None:intergenic
AAGAGGCTGGACTTAAGGAA+AGG 0.616765 8_1:+13667906 Msa1179930:CDS
ACAAAGTCAGAGATTGAGAG+AGG 0.625508 8_1:-13664360 None:intergenic
TTGCAAAATATATCCCTGGA+AGG 0.627342 8_1:+13668615 Msa1179930:CDS
TCATGCAGAATACGAAGCAA+AGG 0.627546 8_1:+13671274 Msa1179930:intron
TAGAGAATGCTAAAAGCAAG+GGG 0.628194 8_1:+13670856 Msa1179930:CDS
AGACAAAGAAACTGCAATCG+TGG 0.628447 8_1:+13669371 Msa1179930:CDS
ATGGTTGGTAAGTTAAAGGA+AGG 0.628985 8_1:+13669737 Msa1179930:CDS
AGGCACAACAGGAAACACAC+AGG 0.630047 8_1:+13669536 Msa1179930:CDS
TAAGCAGTCACTATTATCAG+TGG 0.630365 8_1:+13669688 Msa1179930:CDS
AGAAACCTACTGAAAGTGGA+AGG 0.630726 8_1:+13668675 Msa1179930:CDS
GGTACAAAGAGGTTGAAAGC+AGG 0.631155 8_1:+13669242 Msa1179930:CDS
AATTTCAGGGATGGTAGTAA+CGG 0.631596 8_1:+13669662 Msa1179930:CDS
GGATTCTGGAAGGCCAACCT+CGG 0.634141 8_1:+13670039 Msa1179930:CDS
GTCCCCAGGAATTTCAGGGA+TGG 0.638703 8_1:+13669653 Msa1179930:CDS
ATAAACTTGGTGAAAGCACA+AGG 0.641003 8_1:+13669516 Msa1179930:CDS
TGTAACTCTCGTATTTACCC+TGG 0.649216 8_1:-13670673 None:intergenic
TCTAAGCAAGATACAAAACA+TGG 0.654002 8_1:+13670289 Msa1179930:CDS
GATACCTCGCCCATTAACAG+TGG 0.656512 8_1:-13669831 None:intergenic
GAATATGTGCAGGATTACCA+GGG 0.661750 8_1:+13670656 Msa1179930:CDS
AGAAATCTGAAGGTACAAAG+AGG 0.664818 8_1:+13669231 Msa1179930:CDS
ACAGGGAAGAGGTTCCAAAG+AGG 0.666131 8_1:+13668956 Msa1179930:CDS
TACCATCCCTGAAATTCCTG+GGG 0.670935 8_1:-13669655 None:intergenic
TCTAAAGGTAAACATAAGAG+GGG 0.678462 8_1:+13669185 Msa1179930:CDS
TGTGCTTCATGAAGAACTGG+TGG 0.680636 8_1:+13671137 Msa1179930:CDS
AACCATCCAAATCAATACCA+CGG 0.681549 8_1:-13670231 None:intergenic
AAAACCTGAACTTAATACCG+AGG 0.696878 8_1:-13670056 None:intergenic
AGGAGCGCAAAAGTTATATG+GGG 0.703396 8_1:+13669096 Msa1179930:CDS
TGTACTACATCAGCTCCACA+GGG 0.707042 8_1:+13668939 Msa1179930:CDS
GGATAGGAAGGGTTTCCTAG+AGG 0.708535 8_1:-13669479 None:intergenic
TCCCTTGTCTAGCTACACCA+AGG 0.710926 8_1:+13667864 Msa1179930:intron
AAATTGCCAGAAATGAGCCG+TGG 0.712649 8_1:+13670214 Msa1179930:CDS
GTTCATTCAGGCAATCCAGG+AGG 0.724550 8_1:+13664744 Msa1179930:CDS
AGGGAATCCTATAGGCAATG+CGG 0.732333 8_1:+13670915 Msa1179930:CDS
AGAGAATGCTAAAAGCAAGG+GGG 0.757081 8_1:+13670857 Msa1179930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAGTTAATCTTTATTATTT+TGG + chr8_1:13663762-13663781 Msa1179930:intron 10.0%
!!! TTTAATTTCTTGATAAAAAA+TGG + chr8_1:13664611-13664630 Msa1179930:intron 10.0%
!! TATAAAAATTTCATACAAAA+AGG - chr8_1:13665628-13665647 None:intergenic 10.0%
!! TAATTAATAAGACAAAAAAT+GGG - chr8_1:13667610-13667629 None:intergenic 10.0%
!! ATAATTAATAAGACAAAAAA+TGG - chr8_1:13667611-13667630 None:intergenic 10.0%
!! ATAAAAAAAATATCAGATTA+AGG - chr8_1:13671185-13671204 None:intergenic 10.0%
!!! TTTAGATCATTCTATTTTTT+TGG + chr8_1:13663789-13663808 Msa1179930:intron 15.0%
!!! AATTATATCGGTTTTTATAT+TGG - chr8_1:13665173-13665192 None:intergenic 15.0%
!! TGGAAGAAAAAAAATTATAT+CGG - chr8_1:13665185-13665204 None:intergenic 15.0%
!!! TTTCTTATTAAACATGATTT+TGG - chr8_1:13665205-13665224 None:intergenic 15.0%
!!! TAAGTATTTTAATCTAGATT+CGG - chr8_1:13665443-13665462 None:intergenic 15.0%
!!! ATTTTTATATGTAGTTTGAA+AGG + chr8_1:13665639-13665658 Msa1179930:intron 15.0%
!!! ATCTGAATATTTTTTTTAGA+TGG + chr8_1:13666008-13666027 Msa1179930:intron 15.0%
!!! ACTTGTATTTATAAATTTTG+AGG + chr8_1:13666060-13666079 Msa1179930:intron 15.0%
!!! CTTGTATTTATAAATTTTGA+GGG + chr8_1:13666061-13666080 Msa1179930:intron 15.0%
!! AAAAAAAAATCAAATATGTG+AGG - chr8_1:13666208-13666227 None:intergenic 15.0%
!!! ATTTTTTTTTTCTTTCTGAA+TGG + chr8_1:13666218-13666237 Msa1179930:intron 15.0%
!! AAATTCAAATTTAAAAACTC+AGG - chr8_1:13667763-13667782 None:intergenic 15.0%
!! TTACATTTATTAGATGTATT+TGG + chr8_1:13671347-13671366 Msa1179930:three_prime_UTR 15.0%
!! TTTCTTTATGTAAAAACATA+CGG - chr8_1:13671375-13671394 None:intergenic 15.0%
!! AGTTTCATTAACAACATTAA+TGG + chr8_1:13663730-13663749 Msa1179930:intron 20.0%
!!! GTGATTTTTAGATAATTCTA+TGG + chr8_1:13663814-13663833 Msa1179930:intron 20.0%
!! TTCTATCAAGAAGATAAATA+AGG - chr8_1:13664546-13664565 None:intergenic 20.0%
!!! TTATCTTCTTGATAGAATTT+TGG + chr8_1:13664549-13664568 Msa1179930:intron 20.0%
!! AAAAAATGGTTGTATTCTTT+AGG + chr8_1:13664625-13664644 Msa1179930:intron 20.0%
!! AAAAATGGTTGTATTCTTTA+GGG + chr8_1:13664626-13664645 Msa1179930:intron 20.0%
!! AAAGTAACAAGAATATATTG+AGG + chr8_1:13665025-13665044 Msa1179930:intron 20.0%
!! AAGTAACAAGAATATATTGA+GGG + chr8_1:13665026-13665045 Msa1179930:intron 20.0%
!!! AAGTATTTTAATCTAGATTC+GGG - chr8_1:13665442-13665461 None:intergenic 20.0%
!! GTATTGTATTAGTGATATAT+AGG + chr8_1:13665465-13665484 Msa1179930:intron 20.0%
!! TTCTTGTTAATTTATGCATT+TGG + chr8_1:13665930-13665949 Msa1179930:intron 20.0%
!!! ATTTTTACGCATGATATATT+TGG + chr8_1:13665977-13665996 Msa1179930:intron 20.0%
!!! TTTTTTTAGATGGTAACTAT+TGG + chr8_1:13666018-13666037 Msa1179930:intron 20.0%
!! TAGAAGAAATAAAGGAAAAT+GGG + chr8_1:13666525-13666544 Msa1179930:intron 20.0%
!! ATGTTACAATGAAAATATCA+AGG - chr8_1:13667227-13667246 None:intergenic 20.0%
!! ATAGTGTTAAAAGTCTAAAT+AGG + chr8_1:13667494-13667513 Msa1179930:intron 20.0%
!! ATTAAATGTAAAGTTAGAGA+TGG - chr8_1:13668409-13668428 None:intergenic 20.0%
!! ATAAATAGTCTAATATATGC+CGG + chr8_1:13668876-13668895 Msa1179930:intron 20.0%
!!! TCTTTAAGAGATTTATTTTC+CGG - chr8_1:13669596-13669615 None:intergenic 20.0%
!! GTATTTGCAAATAGAAATAA+TGG + chr8_1:13670394-13670413 Msa1179930:CDS 20.0%
!!! GTAAAAGTTTCTTTGATTTT+TGG + chr8_1:13670744-13670763 Msa1179930:intron 20.0%
!! AAATGTAATTACTTATGCAT+AGG + chr8_1:13671393-13671412 Msa1179930:three_prime_UTR 20.0%
!! AAAACAATACAACATTTATC+CGG - chr8_1:13671459-13671478 None:intergenic 20.0%
! AGAAAATGGTTGTTAAAAGA+CGG + chr8_1:13663403-13663422 Msa1179930:CDS 25.0%
! ACTATTATTGTATTCTTCGA+GGG - chr8_1:13663574-13663593 None:intergenic 25.0%
! AACTATTATTGTATTCTTCG+AGG - chr8_1:13663575-13663594 None:intergenic 25.0%
!!! TAATAGTTTGCTTCATAAAG+AGG + chr8_1:13663587-13663606 Msa1179930:CDS 25.0%
! AAGGAAACTAAATTTGCAAA+GGG - chr8_1:13663860-13663879 None:intergenic 25.0%
!!! TTCCTTGTATACTTTTTGTA+AGG + chr8_1:13663874-13663893 Msa1179930:intron 25.0%
!! TGTGATTTTCTCATTATTTG+CGG - chr8_1:13663962-13663981 None:intergenic 25.0%
! TTCAGTGTAATTATATGTGT+CGG + chr8_1:13663985-13664004 Msa1179930:intron 25.0%
!!! TGCACACTGAAATTTTAAAA+TGG - chr8_1:13664475-13664494 None:intergenic 25.0%
! CTTCAATTATAGAATTTGTC+GGG - chr8_1:13664657-13664676 None:intergenic 25.0%
! GCTTCAATTATAGAATTTGT+CGG - chr8_1:13664658-13664677 None:intergenic 25.0%
!! AGTAATATTACTCCTCTTTT+GGG - chr8_1:13665347-13665366 None:intergenic 25.0%
!! TAGTAATATTACTCCTCTTT+TGG - chr8_1:13665348-13665367 None:intergenic 25.0%
!!! ATATTCTAGATTTTAGTGAG+TGG + chr8_1:13665382-13665401 Msa1179930:intron 25.0%
! AAACTATGTACATCATTCAT+TGG - chr8_1:13665503-13665522 None:intergenic 25.0%
!! TAAAAAGTTTGTCACGTTTT+TGG - chr8_1:13665535-13665554 None:intergenic 25.0%
!!! AGCAAGTTTTAAATTCTTGA+CGG + chr8_1:13666133-13666152 Msa1179930:intron 25.0%
!! TCTCTTTTAAATGATCACAA+AGG + chr8_1:13666172-13666191 Msa1179930:intron 25.0%
! CTAACATTTGCCATTAAAAA+GGG - chr8_1:13666366-13666385 None:intergenic 25.0%
! ACTAACATTTGCCATTAAAA+AGG - chr8_1:13666367-13666386 None:intergenic 25.0%
! TAAAAGAATTACGGAGTTAA+AGG - chr8_1:13666442-13666461 None:intergenic 25.0%
!! TTTAACTCCGTAATTCTTTT+AGG + chr8_1:13666441-13666460 Msa1179930:intron 25.0%
! AACAAAGCCTAAAAGAATTA+CGG - chr8_1:13666451-13666470 None:intergenic 25.0%
! GTAGAAGAAATAAAGGAAAA+TGG + chr8_1:13666524-13666543 Msa1179930:intron 25.0%
! GAGGAACTAAAAAATTGTAT+TGG + chr8_1:13666603-13666622 Msa1179930:intron 25.0%
! GAACTAAAAAATTGTATTGG+AGG + chr8_1:13666606-13666625 Msa1179930:intron 25.0%
! TAAAAAATTGTATTGGAGGA+AGG + chr8_1:13666610-13666629 Msa1179930:intron 25.0%
! GCTGTTATTAAATAATCAAG+TGG - chr8_1:13666865-13666884 None:intergenic 25.0%
! ATTACAAGTAATCTAACACA+TGG - chr8_1:13666889-13666908 None:intergenic 25.0%
! GTGTTAGATTACTTGTAATT+AGG + chr8_1:13666890-13666909 Msa1179930:intron 25.0%
! TCAAACAAAATTAGAGACAA+GGG + chr8_1:13667114-13667133 Msa1179930:intron 25.0%
!!! AATGTTGTGTAAACTGATTT+TGG + chr8_1:13667157-13667176 Msa1179930:intron 25.0%
!!! ATGTTGTGTAAACTGATTTT+GGG + chr8_1:13667158-13667177 Msa1179930:intron 25.0%
! TTCATTGTAACATTTCCTAT+TGG + chr8_1:13667234-13667253 Msa1179930:intron 25.0%
! ACAATGGAAATTAATATCGA+CGG - chr8_1:13667307-13667326 None:intergenic 25.0%
! TCGATATTAATTTCCATTGT+CGG + chr8_1:13667307-13667326 Msa1179930:intron 25.0%
!!! TGAACCAAGAAATTTTTTAC+AGG - chr8_1:13667460-13667479 None:intergenic 25.0%
!!! TTGTTGTTTTATAGTGTCAT+TGG + chr8_1:13667787-13667806 Msa1179930:intron 25.0%
!!! TGTTGTTTTATAGTGTCATT+GGG + chr8_1:13667788-13667807 Msa1179930:intron 25.0%
!! ATTTTATCGTAATTCTTCCT+TGG - chr8_1:13667884-13667903 None:intergenic 25.0%
! AAGGAAGAATTACGATAAAA+TGG + chr8_1:13667883-13667902 Msa1179930:CDS 25.0%
! CTAACAAAGATTTGTATGAA+GGG - chr8_1:13668022-13668041 None:intergenic 25.0%
! TTCTTTCTCAAAAACAGTAT+TGG - chr8_1:13668228-13668247 None:intergenic 25.0%
! AATGTTAATTTCTCTCCTAA+GGG + chr8_1:13668304-13668323 Msa1179930:CDS 25.0%
! AGTAAGAATAACGACATATT+TGG - chr8_1:13668369-13668388 None:intergenic 25.0%
!!! TGCTTTCCATTTTTGATTAT+AGG + chr8_1:13668444-13668463 Msa1179930:intron 25.0%
! TAAATAGTCTAATATATGCC+GGG + chr8_1:13668877-13668896 Msa1179930:intron 25.0%
! TCTTATGTTTACCTTTAGAT+AGG - chr8_1:13669184-13669203 None:intergenic 25.0%
! TATCTAAAGGTAAACATAAG+AGG + chr8_1:13669183-13669202 Msa1179930:CDS 25.0%
! ATCTAAAGGTAAACATAAGA+GGG + chr8_1:13669184-13669203 Msa1179930:CDS 25.0%
!! AGTTTATCTGATTTTTCCAA+TGG - chr8_1:13669503-13669522 None:intergenic 25.0%
! TTGGAAAAATCAGATAAACT+TGG + chr8_1:13669503-13669522 Msa1179930:CDS 25.0%
! AAATGGTTCGTTTAAACATA+TGG + chr8_1:13669943-13669962 Msa1179930:CDS 25.0%
! AATGGTTCGTTTAAACATAT+GGG + chr8_1:13669944-13669963 Msa1179930:CDS 25.0%
! ACCTTTATTGAAAACAACTT+TGG + chr8_1:13670018-13670037 Msa1179930:CDS 25.0%
!!! TCCAAAGTTGTTTTCAATAA+AGG - chr8_1:13670022-13670041 None:intergenic 25.0%
! CTCTTATTCAAAGTTTGAAA+AGG + chr8_1:13670459-13670478 Msa1179930:CDS 25.0%
! TTATTCAAAGTTTGAAAAGG+AGG + chr8_1:13670462-13670481 Msa1179930:CDS 25.0%
!!! TATTTTTGTAGTAGTTAGTG+TGG + chr8_1:13670554-13670573 Msa1179930:intron 25.0%
! TAGATATAAAGAATATGTGC+AGG + chr8_1:13670646-13670665 Msa1179930:intron 25.0%
!!! GCATAGGTATGAAATTTTTT+TGG + chr8_1:13671409-13671428 Msa1179930:three_prime_UTR 25.0%
! TTTATCCGGAATTTGAAAAA+GGG - chr8_1:13671445-13671464 None:intergenic 25.0%
! ATTTATCCGGAATTTGAAAA+AGG - chr8_1:13671446-13671465 None:intergenic 25.0%
GTGAAGACATTCTTAGATAA+TGG + chr8_1:13663285-13663304 Msa1179930:CDS 30.0%
ACAATTTCTTCACCAAATGA+AGG - chr8_1:13663327-13663346 None:intergenic 30.0%
AATGGGCAGATACTTATAAA+TGG + chr8_1:13663433-13663452 Msa1179930:CDS 30.0%
ATGGGCAGATACTTATAAAT+GGG + chr8_1:13663434-13663453 Msa1179930:CDS 30.0%
CTTATGTCGATGTGAAAAAA+AGG + chr8_1:13663457-13663476 Msa1179930:intron 30.0%
ACAATTACATTCATTGCCTA+AGG - chr8_1:13663538-13663557 None:intergenic 30.0%
TACAAGCCTGTTTATGTAAA+AGG + chr8_1:13663657-13663676 Msa1179930:CDS 30.0%
AGGAAACTAAATTTGCAAAG+GGG - chr8_1:13663859-13663878 None:intergenic 30.0%
CAAGGAAACTAAATTTGCAA+AGG - chr8_1:13663861-13663880 None:intergenic 30.0%
! CTCCTTACAAAAAGTATACA+AGG - chr8_1:13663879-13663898 None:intergenic 30.0%
! TATTCTGTTTACAGTTTGCT+TGG + chr8_1:13664052-13664071 Msa1179930:intron 30.0%
TCCAACACATTCTCTTTAAT+TGG + chr8_1:13664115-13664134 Msa1179930:intron 30.0%
ACCAATTAAAGAGAATGTGT+TGG - chr8_1:13664119-13664138 None:intergenic 30.0%
GAATCCCACTAAATTTATGT+CGG + chr8_1:13664151-13664170 Msa1179930:intron 30.0%
! CACTCTTTTCAACTTCAAAT+GGG - chr8_1:13664197-13664216 None:intergenic 30.0%
! ACACTCTTTTCAACTTCAAA+TGG - chr8_1:13664198-13664217 None:intergenic 30.0%
GCATTAGATATATCATATCG+AGG - chr8_1:13664289-13664308 None:intergenic 30.0%
TCTTAATCTTGACTTCTTTG+AGG + chr8_1:13664392-13664411 Msa1179930:CDS 30.0%
AGTGTGCATCTTAAAATGTA+AGG + chr8_1:13664487-13664506 Msa1179930:intron 30.0%
TTCTTGAAGCTACACTAAAA+AGG + chr8_1:13664704-13664723 Msa1179930:CDS 30.0%
TCTTGAAGCTACACTAAAAA+GGG + chr8_1:13664705-13664724 Msa1179930:CDS 30.0%
! GTAATATTACTCCTCTTTTG+GGG - chr8_1:13665346-13665365 None:intergenic 30.0%
! AAATCTAGAATATACACGTG+TGG - chr8_1:13665375-13665394 None:intergenic 30.0%
AGAGTGTATGACAATAAGTA+AGG - chr8_1:13665832-13665851 None:intergenic 30.0%
! TTGAAGACAAGGTTTTCAAA+GGG - chr8_1:13665880-13665899 None:intergenic 30.0%
! AAATTCACAAGTTGAAGACA+AGG - chr8_1:13665891-13665910 None:intergenic 30.0%
ACTTGCTTGACATTTATACA+TGG - chr8_1:13666120-13666139 None:intergenic 30.0%
!!! TTTTTTCTTTCTGAATGGCA+CGG + chr8_1:13666223-13666242 Msa1179930:intron 30.0%
TGAGCAAGTAGAAGAAATAA+AGG + chr8_1:13666517-13666536 Msa1179930:intron 30.0%
AGAAATAAAGGAAAATGGGA+AGG + chr8_1:13666529-13666548 Msa1179930:intron 30.0%
!!! TTTTTTAGTTCCTCCAAATG+AGG - chr8_1:13666597-13666616 None:intergenic 30.0%
GTGCAAAATATGAGGAAAAA+TGG - chr8_1:13666783-13666802 None:intergenic 30.0%
!! AAGAGATTAAGGCTTTGTTT+GGG - chr8_1:13666841-13666860 None:intergenic 30.0%
CTCAAACAAAATTAGAGACA+AGG + chr8_1:13667113-13667132 Msa1179930:intron 30.0%
GTACAGTAGAGAAGATAAAT+GGG - chr8_1:13667335-13667354 None:intergenic 30.0%
AGTACAGTAGAGAAGATAAA+TGG - chr8_1:13667336-13667355 None:intergenic 30.0%
TGAAGTTAGTTGTGTGTTAT+TGG - chr8_1:13667387-13667406 None:intergenic 30.0%
!!! GAAATTTTTTACAGGCCAAA+TGG - chr8_1:13667452-13667471 None:intergenic 30.0%
TTGGCCTGTAAAAAATTTCT+TGG + chr8_1:13667453-13667472 Msa1179930:intron 30.0%
GAATTACGATAAAATGGAAG+AGG + chr8_1:13667889-13667908 Msa1179930:CDS 30.0%
GCTAACAAAGATTTGTATGA+AGG - chr8_1:13668023-13668042 None:intergenic 30.0%
TGTAGTTTATATGCAATGTC+TGG + chr8_1:13668054-13668073 Msa1179930:intron 30.0%
!!! GTCTGGAATTTTTTCATAGT+TGG + chr8_1:13668071-13668090 Msa1179930:intron 30.0%
!!! TGGAATTTTTTCATAGTTGG+AGG + chr8_1:13668074-13668093 Msa1179930:intron 30.0%
TGACATCAATCCAAATCTAT+GGG - chr8_1:13668102-13668121 None:intergenic 30.0%
TTGACATCAATCCAAATCTA+TGG - chr8_1:13668103-13668122 None:intergenic 30.0%
AACATTCTCTGCAAATCTAT+TGG - chr8_1:13668290-13668309 None:intergenic 30.0%
GAATGTTAATTTCTCTCCTA+AGG + chr8_1:13668303-13668322 Msa1179930:CDS 30.0%
TGTCGTTATTCTTACTTCTT+AGG + chr8_1:13668373-13668392 Msa1179930:intron 30.0%
! CCACTTACTCTTTTTATAGT+GGG - chr8_1:13668523-13668542 None:intergenic 30.0%
! ACCACTTACTCTTTTTATAG+TGG - chr8_1:13668524-13668543 None:intergenic 30.0%
ACTATAAAAAGAGTAAGTGG+TGG + chr8_1:13668523-13668542 Msa1179930:intron 30.0%
CTATAAAAAGAGTAAGTGGT+GGG + chr8_1:13668524-13668543 Msa1179930:intron 30.0%
!! GCTTTAAAATATACCTTCCA+GGG - chr8_1:13668631-13668650 None:intergenic 30.0%
!!! GTATATTTTAAAGCCAGAAG+TGG + chr8_1:13668637-13668656 Msa1179930:CDS 30.0%
TAACGTTAGGTGAAAATAAC+AGG - chr8_1:13668703-13668722 None:intergenic 30.0%
! TATTATCCACTGATAACGTT+AGG - chr8_1:13668716-13668735 None:intergenic 30.0%
!! TTAGTTTGTTACAGTGCTTA+TGG + chr8_1:13668808-13668827 Msa1179930:intron 30.0%
ATGGATTTCTGTTAAGTGAA+TGG + chr8_1:13668827-13668846 Msa1179930:intron 30.0%
GTTTGATTCTTCTTTCACTT+TGG - chr8_1:13669024-13669043 None:intergenic 30.0%
GAAAGAAGAATCAAACACAT+TGG + chr8_1:13669028-13669047 Msa1179930:CDS 30.0%
TCTAAAGGTAAACATAAGAG+GGG + chr8_1:13669185-13669204 Msa1179930:CDS 30.0%
AACATTGATGAGAAATCTGA+AGG + chr8_1:13669221-13669240 Msa1179930:CDS 30.0%
GTACAGATGTGAAAATGTTT+GGG + chr8_1:13669294-13669313 Msa1179930:CDS 30.0%
AGTTCAGATTTACGAAAAAC+AGG + chr8_1:13669434-13669453 Msa1179930:CDS 30.0%
ATTTACGAAAAACAGGTCAA+AGG + chr8_1:13669441-13669460 Msa1179930:CDS 30.0%
! ATTTTTCCAATGGATAGGAA+GGG - chr8_1:13669493-13669512 None:intergenic 30.0%
! ATCTGATTTTTCCAATGGAT+AGG - chr8_1:13669498-13669517 None:intergenic 30.0%
CAAAAGAAACTTCATGTGTA+CGG - chr8_1:13669571-13669590 None:intergenic 30.0%
TTACCAAAAACACAGTGAAA+TGG + chr8_1:13669718-13669737 Msa1179930:CDS 30.0%
!! TGAAATGGTTGGTAAGTTAA+AGG + chr8_1:13669733-13669752 Msa1179930:CDS 30.0%
ACATTTGGAAAAATTGCTCA+GGG + chr8_1:13669778-13669797 Msa1179930:CDS 30.0%
TTAAATCCTCCACTGTTAAT+GGG + chr8_1:13669822-13669841 Msa1179930:CDS 30.0%
TTCAAATTGCTTTGCAACAA+TGG - chr8_1:13669921-13669940 None:intergenic 30.0%
TTGAAAACAACTTTGGATTC+TGG + chr8_1:13670025-13670044 Msa1179930:CDS 30.0%
TCTAAGCAAGATACAAAACA+TGG + chr8_1:13670289-13670308 Msa1179930:CDS 30.0%
GTATCTTACTTTCTTTCACA+GGG - chr8_1:13670327-13670346 None:intergenic 30.0%
TGTATCTTACTTTCTTTCAC+AGG - chr8_1:13670328-13670347 None:intergenic 30.0%
! AGGATAACTCTTTCTTCTTT+TGG - chr8_1:13670423-13670442 None:intergenic 30.0%
AAAGAAGAAAGAGTTATCCT+CGG + chr8_1:13670423-13670442 Msa1179930:CDS 30.0%
ATAAAGAACAACTGCTTACT+GGG - chr8_1:13670521-13670540 None:intergenic 30.0%
AATAAAGAACAACTGCTTAC+TGG - chr8_1:13670522-13670541 None:intergenic 30.0%
TTCCTTCAAAATCTTGTGTA+AGG - chr8_1:13670702-13670721 None:intergenic 30.0%
!! ACAAGATTTTGAAGGAATAC+AGG + chr8_1:13670705-13670724 Msa1179930:CDS 30.0%
!!! TTTTGGTTCAAGTGTGTATT+TGG + chr8_1:13670761-13670780 Msa1179930:intron 30.0%
GAGATGTTAGACAAAATATC+AGG - chr8_1:13670795-13670814 None:intergenic 30.0%
TTTAGAGAATGCTAAAAGCA+AGG + chr8_1:13670854-13670873 Msa1179930:CDS 30.0%
TTAGAGAATGCTAAAAGCAA+GGG + chr8_1:13670855-13670874 Msa1179930:CDS 30.0%
! GTATCTATTTTCTGAACATG+TGG + chr8_1:13671067-13671086 Msa1179930:intron 30.0%
!! ACATTCTTAGATAATGGACC+TGG + chr8_1:13663291-13663310 Msa1179930:CDS 35.0%
!! ACATTCTTAGATAATGGACC+TGG + chr8_1:13663291-13663310 Msa1179930:CDS 35.0%
AGATTTGTCTCATACTCAAC+AGG + chr8_1:13663371-13663390 Msa1179930:CDS 35.0%
ACAGGTGAAAAGGAAGAAAA+TGG + chr8_1:13663389-13663408 Msa1179930:CDS 35.0%
ATGTGAAAAAAAGGACACCA+AGG + chr8_1:13663466-13663485 Msa1179930:intron 35.0%
ATAAACAGGCTTGTATTGTC+GGG - chr8_1:13663652-13663671 None:intergenic 35.0%
CATAAACAGGCTTGTATTGT+CGG - chr8_1:13663653-13663672 None:intergenic 35.0%
! GGCAAACCTTTTACATAAAC+AGG - chr8_1:13663666-13663685 None:intergenic 35.0%
GTCAATTAATGTAGTGTGCT+GGG - chr8_1:13663691-13663710 None:intergenic 35.0%
TGTCAATTAATGTAGTGTGC+TGG - chr8_1:13663692-13663711 None:intergenic 35.0%
TTGCAAAGGGGTCATTAAAA+TGG - chr8_1:13663847-13663866 None:intergenic 35.0%
! GTAATTATATGTGTCGGTGT+CGG + chr8_1:13663991-13664010 Msa1179930:intron 35.0%
AGGTCCGACATAAATTTAGT+GGG - chr8_1:13664158-13664177 None:intergenic 35.0%
TAGGTCCGACATAAATTTAG+TGG - chr8_1:13664159-13664178 None:intergenic 35.0%
CTCAATCTCTGACTTTGTTA+TGG + chr8_1:13664365-13664384 Msa1179930:CDS 35.0%
! TTCCACAAGGTTTCTACTTT+TGG + chr8_1:13664415-13664434 Msa1179930:intron 35.0%
ATAAGGTTTGAATTAGCCAG+AGG - chr8_1:13664529-13664548 None:intergenic 35.0%
CGCTGAAAAGAAAGTTATTC+TGG - chr8_1:13664586-13664605 None:intergenic 35.0%
ACTAAAAAGGGAATCTCATG+CGG + chr8_1:13664717-13664736 Msa1179930:CDS 35.0%
!!! CTCAGTGAGTTTTGTTCAAA+TGG + chr8_1:13664803-13664822 Msa1179930:intron 35.0%
GTTTCTCTCGATAAGCAAAT+TGG + chr8_1:13664897-13664916 Msa1179930:intron 35.0%
! AAGAATATATTGAGGGCATG+AGG + chr8_1:13665033-13665052 Msa1179930:intron 35.0%
AGTGTATTAGGAAAAACCCA+AGG + chr8_1:13665057-13665076 Msa1179930:intron 35.0%
! AAACTAGCTTGTAAGGTAAG+GGG - chr8_1:13665132-13665151 None:intergenic 35.0%
! GAAACTAGCTTGTAAGGTAA+GGG - chr8_1:13665133-13665152 None:intergenic 35.0%
ACGATATCAAGTTTCAAACG+CGG - chr8_1:13665234-13665253 None:intergenic 35.0%
AGCAATTTATCTCGCATGTT+TGG - chr8_1:13665261-13665280 None:intergenic 35.0%
CGAGATAAATTGCTTGTGAT+GGG + chr8_1:13665267-13665286 Msa1179930:intron 35.0%
!! TTCTAGATTTTAGTGAGTGG+TGG + chr8_1:13665385-13665404 Msa1179930:intron 35.0%
TTCACTACGTACCATGTATT+TGG - chr8_1:13665419-13665438 None:intergenic 35.0%
AAATACACCAAGACGAAAGA+CGG - chr8_1:13665604-13665623 None:intergenic 35.0%
CTACGAAGAAAAAAAACAGC+AGG - chr8_1:13665665-13665684 None:intergenic 35.0%
TGAAGGAGTTCAGATTTACA+TGG + chr8_1:13665704-13665723 Msa1179930:intron 35.0%
CTAAGAATCACGTCAAAATG+CGG + chr8_1:13665756-13665775 Msa1179930:intron 35.0%
TACTTGAGTGACTTGAACTT+GGG - chr8_1:13665797-13665816 None:intergenic 35.0%
ATACTTGAGTGACTTGAACT+TGG - chr8_1:13665798-13665817 None:intergenic 35.0%
! GTTGAAGACAAGGTTTTCAA+AGG - chr8_1:13665881-13665900 None:intergenic 35.0%
! TTTTTCTTTCTGAATGGCAC+GGG + chr8_1:13666224-13666243 Msa1179930:intron 35.0%
AGCCTCTTGTGTAAAAAAGA+GGG + chr8_1:13666263-13666282 Msa1179930:intron 35.0%
!!! TACCCTCTTTTTTACACAAG+AGG - chr8_1:13666268-13666287 None:intergenic 35.0%
CTTGTGTAAAAAAGAGGGTA+AGG + chr8_1:13666268-13666287 Msa1179930:intron 35.0%
AATAAAGGAAAATGGGAAGG+AGG + chr8_1:13666532-13666551 Msa1179930:intron 35.0%
ATAAAGGAAAATGGGAAGGA+GGG + chr8_1:13666533-13666552 Msa1179930:intron 35.0%
AATACAAAACCCTCCTCATT+TGG + chr8_1:13666581-13666600 Msa1179930:intron 35.0%
! ATTGTATTGGAGGAAGGTTT+TGG + chr8_1:13666616-13666635 Msa1179930:intron 35.0%
! TTGTATTGGAGGAAGGTTTT+GGG + chr8_1:13666617-13666636 Msa1179930:intron 35.0%
!! CAAGAGATTAAGGCTTTGTT+TGG - chr8_1:13666842-13666861 None:intergenic 35.0%
AATCAAGTGGCAAGAGATTA+AGG - chr8_1:13666852-13666871 None:intergenic 35.0%
TAGTACACACCTATTTGATG+GGG - chr8_1:13666965-13666984 None:intergenic 35.0%
CTAGTACACACCTATTTGAT+GGG - chr8_1:13666966-13666985 None:intergenic 35.0%
GTTAATAACAGAAACTGACC+CGG - chr8_1:13667020-13667039 None:intergenic 35.0%
CAACTAACTAAGTGCTAACA+TGG - chr8_1:13667060-13667079 None:intergenic 35.0%
CATGTTAGCACTTAGTTAGT+TGG + chr8_1:13667058-13667077 Msa1179930:intron 35.0%
AACAAAATTAGAGACAAGGG+AGG + chr8_1:13667117-13667136 Msa1179930:intron 35.0%
ACAAAATTAGAGACAAGGGA+GGG + chr8_1:13667118-13667137 Msa1179930:intron 35.0%
!! TTGTGTAAACTGATTTTGGG+AGG + chr8_1:13667161-13667180 Msa1179930:intron 35.0%
!! TGTGTAAACTGATTTTGGGA+GGG + chr8_1:13667162-13667181 Msa1179930:intron 35.0%
AAAATCTCCTCTAAACTCCA+AGG - chr8_1:13667203-13667222 None:intergenic 35.0%
AAGAAGGTTGTAGAACCAAT+AGG - chr8_1:13667252-13667271 None:intergenic 35.0%
GTCTGAACTTTGAATCAAGA+AGG - chr8_1:13667268-13667287 None:intergenic 35.0%
! TAGTTGTGTGTTATTGGTGT+TGG - chr8_1:13667381-13667400 None:intergenic 35.0%
ATCATGTACTATCGTCAGTA+TGG - chr8_1:13667575-13667594 None:intergenic 35.0%
TGACGATAGTACATGATGTA+TGG + chr8_1:13667578-13667597 Msa1179930:intron 35.0%
CCAAGGCCTATAATCAAAAA+TGG - chr8_1:13668453-13668472 None:intergenic 35.0%
!! CCATTTTTGATTATAGGCCT+TGG + chr8_1:13668450-13668469 Msa1179930:intron 35.0%
TCAAGATCCTGTATGAAACT+TGG - chr8_1:13668499-13668518 None:intergenic 35.0%
CCCACTATAAAAAGAGTAAG+TGG + chr8_1:13668520-13668539 Msa1179930:intron 35.0%
CAGATTGCAAAATATATCCC+TGG + chr8_1:13668611-13668630 Msa1179930:intron 35.0%
TTGCAAAATATATCCCTGGA+AGG + chr8_1:13668615-13668634 Msa1179930:CDS 35.0%
!! GGCTTTAAAATATACCTTCC+AGG - chr8_1:13668632-13668651 None:intergenic 35.0%
TTCAAGAAACCTACTGAAAG+TGG + chr8_1:13668671-13668690 Msa1179930:CDS 35.0%
! TTTTCACCTAACGTTATCAG+TGG + chr8_1:13668707-13668726 Msa1179930:intron 35.0%
GCACTGTAACAAACTAAAGA+AGG - chr8_1:13668805-13668824 None:intergenic 35.0%
ACATGATTATCAACAGCTGA+AGG + chr8_1:13669076-13669095 Msa1179930:CDS 35.0%
! AAGGAGCGCAAAAGTTATAT+GGG + chr8_1:13669095-13669114 Msa1179930:CDS 35.0%
! AGAAATCTGAAGGTACAAAG+AGG + chr8_1:13669231-13669250 Msa1179930:CDS 35.0%
ACTCGTGAATCATATTCTCT+AGG + chr8_1:13669272-13669291 Msa1179930:CDS 35.0%
GGTACAGATGTGAAAATGTT+TGG + chr8_1:13669293-13669312 Msa1179930:CDS 35.0%
GAGTCTTCAGTAAGTTCAAA+TGG - chr8_1:13669338-13669357 None:intergenic 35.0%
TTTGAACTTACTGAAGACTC+TGG + chr8_1:13669338-13669357 Msa1179930:CDS 35.0%
! GATTTTTCCAATGGATAGGA+AGG - chr8_1:13669494-13669513 None:intergenic 35.0%
! ATAAACTTGGTGAAAGCACA+AGG + chr8_1:13669516-13669535 Msa1179930:CDS 35.0%
! ACATGAAGTTTCTTTTGTGC+CGG + chr8_1:13669574-13669593 Msa1179930:CDS 35.0%
AATTTCAGGGATGGTAGTAA+CGG + chr8_1:13669662-13669681 Msa1179930:CDS 35.0%
TAAGCAGTCACTATTATCAG+TGG + chr8_1:13669688-13669707 Msa1179930:CDS 35.0%
! CAACCATTTCACTGTGTTTT+TGG - chr8_1:13669724-13669743 None:intergenic 35.0%
CAAAAACACAGTGAAATGGT+TGG + chr8_1:13669722-13669741 Msa1179930:CDS 35.0%
!! ATGGTTGGTAAGTTAAAGGA+AGG + chr8_1:13669737-13669756 Msa1179930:CDS 35.0%
CACATTTGGAAAAATTGCTC+AGG + chr8_1:13669777-13669796 Msa1179930:CDS 35.0%
GTTAAATCCTCCACTGTTAA+TGG + chr8_1:13669821-13669840 Msa1179930:CDS 35.0%
TTTGCAACAATGGTTTCTTC+GGG - chr8_1:13669911-13669930 None:intergenic 35.0%
CTTTGCAACAATGGTTTCTT+CGG - chr8_1:13669912-13669931 None:intergenic 35.0%
GCAAAGCAATTTGAACGAAA+TGG + chr8_1:13669926-13669945 Msa1179930:CDS 35.0%
AATCAAAGCAAACACTTCAG+AGG + chr8_1:13669967-13669986 Msa1179930:CDS 35.0%
AAACAACTTTGGATTCTGGA+AGG + chr8_1:13670029-13670048 Msa1179930:CDS 35.0%
AAAACCTGAACTTAATACCG+AGG - chr8_1:13670059-13670078 None:intergenic 35.0%
!! TTCAGGTTTTCCTAGCATTT+TGG + chr8_1:13670069-13670088 Msa1179930:CDS 35.0%
TTTGTGTTGTCCAAAATGCT+AGG - chr8_1:13670082-13670101 None:intergenic 35.0%
AACCATCCAAATCAATACCA+CGG - chr8_1:13670234-13670253 None:intergenic 35.0%
!! TATTGATTTGGATGGTTGCA+GGG + chr8_1:13670237-13670256 Msa1179930:CDS 35.0%
TCTTGCTTAGATCTATTTGC+AGG - chr8_1:13670280-13670299 None:intergenic 35.0%
GCAAGATACAAAACATGGAA+TGG + chr8_1:13670294-13670313 Msa1179930:CDS 35.0%
TTACTTTCTTTCACAGGGTA+GGG - chr8_1:13670322-13670341 None:intergenic 35.0%
AAAGGAGGAACCTGAATTAA+AGG + chr8_1:13670477-13670496 Msa1179930:CDS 35.0%
AAGGAGGAACCTGAATTAAA+GGG + chr8_1:13670478-13670497 Msa1179930:CDS 35.0%
GTTATAGGTCCCTTTAATTC+AGG - chr8_1:13670490-13670509 None:intergenic 35.0%
TACTGGGAAAAAGTCGTTAT+AGG - chr8_1:13670505-13670524 None:intergenic 35.0%
! TTTTGTAGTAGTTAGTGTGG+TGG + chr8_1:13670557-13670576 Msa1179930:intron 35.0%
! CTCCTTACACAAGATTTTGA+AGG + chr8_1:13670697-13670716 Msa1179930:CDS 35.0%
TAACATCTCACTCATTTGCA+GGG + chr8_1:13670806-13670825 Msa1179930:intron 35.0%
TAGAGAATGCTAAAAGCAAG+GGG + chr8_1:13670856-13670875 Msa1179930:CDS 35.0%
CACAAATTAGGGAATCCTAT+AGG + chr8_1:13670907-13670926 Msa1179930:CDS 35.0%
TATTGTGCTTCATGAAGAAC+TGG + chr8_1:13671134-13671153 Msa1179930:CDS 35.0%
CTCATACTCAACAGGTGAAA+AGG + chr8_1:13663379-13663398 Msa1179930:CDS 40.0%
TTAAAAGACGGAGAGAGGAA+TGG + chr8_1:13663415-13663434 Msa1179930:CDS 40.0%
TAAAAGACGGAGAGAGGAAT+GGG + chr8_1:13663416-13663435 Msa1179930:CDS 40.0%
ATTAATGTAGTGTGCTGGGA+TGG - chr8_1:13663687-13663706 None:intergenic 40.0%
TTGTAAGGAGTTTGTGTCAG+TGG + chr8_1:13663889-13663908 Msa1179930:intron 40.0%
TCGGACCTACATGATTTAGT+GGG + chr8_1:13664170-13664189 Msa1179930:intron 40.0%
ACAAAGTCAGAGATTGAGAG+AGG - chr8_1:13664363-13664382 None:intergenic 40.0%
GTCCAAAAGTAGAAACCTTG+TGG - chr8_1:13664420-13664439 None:intergenic 40.0%
CTTCAGATTATCACTACCTC+TGG + chr8_1:13664510-13664529 Msa1179930:intron 40.0%
! AATTGATTCCAGTCGAATCG+AGG + chr8_1:13664977-13664996 Msa1179930:intron 40.0%
ATCTATTCAGTGTACGCCTT+GGG - chr8_1:13665076-13665095 None:intergenic 40.0%
TATCTATTCAGTGTACGCCT+TGG - chr8_1:13665077-13665096 None:intergenic 40.0%
GCGTACACTGAATAGATATG+AGG + chr8_1:13665079-13665098 Msa1179930:intron 40.0%
! CGAAACTAGCTTGTAAGGTA+AGG - chr8_1:13665134-13665153 None:intergenic 40.0%
! CCTTACGAAACTAGCTTGTA+AGG - chr8_1:13665139-13665158 None:intergenic 40.0%
! CCTTACAAGCTAGTTTCGTA+AGG + chr8_1:13665136-13665155 Msa1179930:intron 40.0%
CGATATCAAGTTTCAAACGC+GGG - chr8_1:13665233-13665252 None:intergenic 40.0%
GCGAGATAAATTGCTTGTGA+TGG + chr8_1:13665266-13665285 Msa1179930:intron 40.0%
!! TTTAGTGAGTGGTGGATATG+CGG + chr8_1:13665393-13665412 Msa1179930:intron 40.0%
AGATCGGAACTAATCTGCAA+TGG - chr8_1:13665580-13665599 None:intergenic 40.0%
TCGTAGCAGATTATTGACGT+TGG + chr8_1:13665679-13665698 Msa1179930:intron 40.0%
GATTATTGACGTTGGTGTGA+AGG + chr8_1:13665687-13665706 Msa1179930:intron 40.0%
CAGCCTCTTGTGTAAAAAAG+AGG + chr8_1:13666262-13666281 Msa1179930:intron 40.0%
TGTAAAAAAGAGGGTAAGGC+TGG + chr8_1:13666272-13666291 Msa1179930:intron 40.0%
TGGTACAATACACCAAATGG+TGG + chr8_1:13666292-13666311 Msa1179930:intron 40.0%
GGTACAATACACCAAATGGT+GGG + chr8_1:13666293-13666312 Msa1179930:intron 40.0%
! TTAGTATTTTCTCCCTTGCC+AGG + chr8_1:13666402-13666421 Msa1179930:intron 40.0%
! TAGTATTTTCTCCCTTGCCA+GGG + chr8_1:13666403-13666422 Msa1179930:intron 40.0%
ATTACGGAGTTAAAGGTCGA+GGG - chr8_1:13666435-13666454 None:intergenic 40.0%
AATTACGGAGTTAAAGGTCG+AGG - chr8_1:13666436-13666455 None:intergenic 40.0%
!! TTAGGCTTTGTTTGCGTGTT+TGG + chr8_1:13666459-13666478 Msa1179930:intron 40.0%
TTAGTTCCTCCAAATGAGGA+GGG - chr8_1:13666593-13666612 None:intergenic 40.0%
! TTTAGTTCCTCCAAATGAGG+AGG - chr8_1:13666594-13666613 None:intergenic 40.0%
! TGTATTGGAGGAAGGTTTTG+GGG + chr8_1:13666618-13666637 Msa1179930:intron 40.0%
! TTTGAGGGGTGCAAAATATG+AGG - chr8_1:13666791-13666810 None:intergenic 40.0%
! AAGGAAAGGAAAGGCTTTGA+GGG - chr8_1:13666806-13666825 None:intergenic 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG - chr8_1:13666834-13666853 None:intergenic 40.0%
GTTAACAGACCCCATCAAAT+AGG + chr8_1:13666953-13666972 Msa1179930:intron 40.0%
CCTAGTACACACCTATTTGA+TGG - chr8_1:13666967-13666986 None:intergenic 40.0%
CCATCAAATAGGTGTGTACT+AGG + chr8_1:13666964-13666983 Msa1179930:intron 40.0%
AGGTGTGTACTAGGTGAAAT+AGG + chr8_1:13666973-13666992 Msa1179930:intron 40.0%
GGTGTGTACTAGGTGAAATA+GGG + chr8_1:13666974-13666993 Msa1179930:intron 40.0%
GTGTGTACTAGGTGAAATAG+GGG + chr8_1:13666975-13666994 Msa1179930:intron 40.0%
! TGCTTGCTGAATTGGTTTAG+TGG + chr8_1:13667084-13667103 Msa1179930:intron 40.0%
! TGCTGAATTGGTTTAGTGGT+TGG + chr8_1:13667088-13667107 Msa1179930:intron 40.0%
AGACAAGGGAGGGAAATAAT+AGG + chr8_1:13667128-13667147 Msa1179930:intron 40.0%
TGATTCAAAGTTCAGACCGA+AGG + chr8_1:13667271-13667290 Msa1179930:intron 40.0%
!! AGATAAATGGGTACCGACAA+TGG - chr8_1:13667323-13667342 None:intergenic 40.0%
TGAAGTCGTAATCAGCCATT+TGG + chr8_1:13667434-13667453 Msa1179930:intron 40.0%
! TTACGATAGAGCCATTGACT+TGG + chr8_1:13667642-13667661 Msa1179930:intron 40.0%
!! TTTATCTGGCTCTTCATGGA+CGG - chr8_1:13667679-13667698 None:intergenic 40.0%
TACGATAAAATGGAAGAGGC+TGG + chr8_1:13667893-13667912 Msa1179930:CDS 40.0%
! TCAATAAGTGCTACTGCCAA+GGG + chr8_1:13668119-13668138 Msa1179930:CDS 40.0%
GTGATGGCACAACATCATAA+AGG - chr8_1:13668184-13668203 None:intergenic 40.0%
TTGAGAAAGAAATCCCTACC+AGG + chr8_1:13668237-13668256 Msa1179930:CDS 40.0%
TGAGAAAGAAATCCCTACCA+GGG + chr8_1:13668238-13668257 Msa1179930:CDS 40.0%
ATTATTTCCTTTGCTTGCCC+TGG - chr8_1:13668258-13668277 None:intergenic 40.0%
AGGGCAAGCAAAGGAAATAA+TGG + chr8_1:13668257-13668276 Msa1179930:CDS 40.0%
CCTCAAAAGTCATTCCGTTA+GGG - chr8_1:13668334-13668353 None:intergenic 40.0%
ACCTCAAAAGTCATTCCGTT+AGG - chr8_1:13668335-13668354 None:intergenic 40.0%
CACACATCCAAGTTTCATAC+AGG + chr8_1:13668489-13668508 Msa1179930:CDS 40.0%
AAGCTTTCTGAATCCACTTC+TGG - chr8_1:13668653-13668672 None:intergenic 40.0%
AGAAACCTACTGAAAGTGGA+AGG + chr8_1:13668675-13668694 Msa1179930:CDS 40.0%
GATGCAAAAGATACAAAGCC+CGG - chr8_1:13668898-13668917 None:intergenic 40.0%
! GTCATTTGGAACTTCCTCTT+TGG - chr8_1:13668973-13668992 None:intergenic 40.0%
GGAAGTTCCAAATGACGATT+TGG + chr8_1:13668977-13668996 Msa1179930:CDS 40.0%
! AGTTCCAAATGACGATTTGG+AGG + chr8_1:13668980-13668999 Msa1179930:CDS 40.0%
GTTTCCTCCAAATCGTCATT+TGG - chr8_1:13668987-13669006 None:intergenic 40.0%
! GAAGGAGCGCAAAAGTTATA+TGG + chr8_1:13669094-13669113 Msa1179930:CDS 40.0%
! AGGAGCGCAAAAGTTATATG+GGG + chr8_1:13669096-13669115 Msa1179930:CDS 40.0%
! TGGGGAGTTTGTTTGATGAA+AGG + chr8_1:13669114-13669133 Msa1179930:CDS 40.0%
! GGGGAGTTTGTTTGATGAAA+GGG + chr8_1:13669115-13669134 Msa1179930:CDS 40.0%
TGAAAGGGAAAGTGAAGTCA+CGG + chr8_1:13669130-13669149 Msa1179930:CDS 40.0%
CAGTCTGATAGCCTATCTAA+AGG + chr8_1:13669170-13669189 Msa1179930:CDS 40.0%
AGACAAAGAAACTGCAATCG+TGG + chr8_1:13669371-13669390 Msa1179930:CDS 40.0%
TTTCCAGAAAGGATACAGTC+AGG + chr8_1:13669394-13669413 Msa1179930:CDS 40.0%
! TCTTTTGACCAAAGACCTCT+AGG + chr8_1:13669464-13669483 Msa1179930:CDS 40.0%
!!! ATTCCTGGGGACTTTTTTCT+TGG - chr8_1:13669645-13669664 None:intergenic 40.0%
AAAAAGTCCCCAGGAATTTC+AGG + chr8_1:13669648-13669667 Msa1179930:CDS 40.0%
AAAAGTCCCCAGGAATTTCA+GGG + chr8_1:13669649-13669668 Msa1179930:CDS 40.0%
TAAGAGAGAGCTTTCAGACT+TGG + chr8_1:13669859-13669878 Msa1179930:CDS 40.0%
AGAGCTTTCAGACTTGGATT+TGG + chr8_1:13669865-13669884 Msa1179930:CDS 40.0%
GAGCTTTCAGACTTGGATTT+GGG + chr8_1:13669866-13669885 Msa1179930:CDS 40.0%
!! AATGAGCCGTGGTATTGATT+TGG + chr8_1:13670225-13670244 Msa1179930:CDS 40.0%
!! GTATTGATTTGGATGGTTGC+AGG + chr8_1:13670236-13670255 Msa1179930:CDS 40.0%
ATTTGCAGGCACTCTTCTAT+TGG - chr8_1:13670266-13670285 None:intergenic 40.0%
CTTACTTTCTTTCACAGGGT+AGG - chr8_1:13670323-13670342 None:intergenic 40.0%
AACACCTAATTCACGTGAAG+AGG + chr8_1:13670348-13670367 Msa1179930:CDS 40.0%
! AGAGCAACTATTTTCATCCG+AGG - chr8_1:13670443-13670462 None:intergenic 40.0%
TAGTAGTTAGTGTGGTGGTA+AGG + chr8_1:13670562-13670581 Msa1179930:intron 40.0%
AGAATATGTGCAGGATTACC+AGG + chr8_1:13670655-13670674 Msa1179930:CDS 40.0%
GAATATGTGCAGGATTACCA+GGG + chr8_1:13670656-13670675 Msa1179930:CDS 40.0%
TGTAACTCTCGTATTTACCC+TGG - chr8_1:13670676-13670695 None:intergenic 40.0%
CTAACATCTCACTCATTTGC+AGG + chr8_1:13670805-13670824 Msa1179930:intron 40.0%
AGGGTTGAGTTTCAGAAACT+AGG + chr8_1:13670825-13670844 Msa1179930:intron 40.0%
AGAGAATGCTAAAAGCAAGG+GGG + chr8_1:13670857-13670876 Msa1179930:CDS 40.0%
GGGGATAAGGATAGATATGA+CGG + chr8_1:13670876-13670895 Msa1179930:CDS 40.0%
ACGGCATTGCAACACAAATT+AGG + chr8_1:13670895-13670914 Msa1179930:CDS 40.0%
CGGCATTGCAACACAAATTA+GGG + chr8_1:13670896-13670915 Msa1179930:CDS 40.0%
! CAGTATTGAGTCTACATGCA+CGG - chr8_1:13670965-13670984 None:intergenic 40.0%
TGTCTCTGCAATTCACATCA+TGG - chr8_1:13671093-13671112 None:intergenic 40.0%
ATTCTGCATGAAGTGTGAAG+AGG - chr8_1:13671265-13671284 None:intergenic 40.0%
TCATGCAGAATACGAAGCAA+AGG + chr8_1:13671274-13671293 Msa1179930:intron 40.0%
!!! CCAGACCCTTTTTCAAATTC+CGG + chr8_1:13671437-13671456 Msa1179930:three_prime_UTR 40.0%
!! CTTAGATAATGGACCTGGAG+AGG + chr8_1:13663296-13663315 Msa1179930:CDS 45.0%
GGTTGTTAAAAGACGGAGAG+AGG + chr8_1:13663410-13663429 Msa1179930:CDS 45.0%
TGCAGACAGCAGAAAATCCT+TGG - chr8_1:13663486-13663505 None:intergenic 45.0%
! AAGGATTTTCTGCTGTCTGC+AGG + chr8_1:13663485-13663504 Msa1179930:intron 45.0%
! AGGATTTTCTGCTGTCTGCA+GGG + chr8_1:13663486-13663505 Msa1179930:intron 45.0%
GAAACGTCGAAGCAATCCTT+AGG + chr8_1:13663519-13663538 Msa1179930:intron 45.0%
AGAGGCTCTTCGTCTTCAAT+CGG + chr8_1:13663605-13663624 Msa1179930:CDS 45.0%
TCGGGCCATAATTTCGTCTT+GGG - chr8_1:13663634-13663653 None:intergenic 45.0%
! CAGTCTAGAGCTATGAAGCA+CGG + chr8_1:13663914-13663933 Msa1179930:intron 45.0%
AGAGCTATGAAGCACGGATA+CGG + chr8_1:13663920-13663939 Msa1179930:intron 45.0%
GTCGGACCTACATGATTTAG+TGG + chr8_1:13664169-13664188 Msa1179930:intron 45.0%
TGGGTCCCACTAAATCATGT+AGG - chr8_1:13664178-13664197 None:intergenic 45.0%
!! GACTTCTTTGAGGTTCCACA+AGG + chr8_1:13664402-13664421 Msa1179930:CDS 45.0%
AGCTGCAATGTCACAAACAG+TGG + chr8_1:13664675-13664694 Msa1179930:intron 45.0%
GCTGCAATGTCACAAACAGT+GGG + chr8_1:13664676-13664695 Msa1179930:intron 45.0%
AAGCTCTTGAGAGAGTCATC+AGG + chr8_1:13664773-13664792 Msa1179930:CDS 45.0%
ATTCCAGTCGAATCGAGGTT+TGG + chr8_1:13664982-13665001 Msa1179930:intron 45.0%
! AGGGCATGAGGAAGTGTATT+AGG + chr8_1:13665045-13665064 Msa1179930:intron 45.0%
TGGATATGCGGCCAAATACA+TGG + chr8_1:13665405-13665424 Msa1179930:intron 45.0%
CAAGACGAAAGACGGTAGAT+CGG - chr8_1:13665596-13665615 None:intergenic 45.0%
TGGTCGAAGAACGAGATCTA+TGG + chr8_1:13665724-13665743 Msa1179930:intron 45.0%
GAGTGACTTGAACTTGGGTT+TGG - chr8_1:13665792-13665811 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr8_1:13666257-13666276 None:intergenic 45.0%
GGCTGGTACAATACACCAAA+TGG + chr8_1:13666289-13666308 Msa1179930:intron 45.0%
! AGTATTTTCTCCCTTGCCAG+GGG + chr8_1:13666404-13666423 Msa1179930:intron 45.0%
!! GCTTTGTTTGCGTGTTTGGA+GGG + chr8_1:13666463-13666482 Msa1179930:intron 45.0%
! CTTTGTTTGCGTGTTTGGAG+GGG + chr8_1:13666464-13666483 Msa1179930:intron 45.0%
AAAATGGGAAGGAGGGCTTT+GGG + chr8_1:13666540-13666559 Msa1179930:intron 45.0%
ACAAAACCCTCCTCATTTGG+AGG + chr8_1:13666584-13666603 Msa1179930:intron 45.0%
!! GTATTGGAGGAAGGTTTTGG+GGG + chr8_1:13666619-13666638 Msa1179930:intron 45.0%
!! AGGAAAGGAAAGGCTTTGAG+GGG - chr8_1:13666805-13666824 None:intergenic 45.0%
GAAGGAAAGGAAAGGCTTTG+AGG - chr8_1:13666807-13666826 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr8_1:13666829-13666848 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr8_1:13666830-13666849 None:intergenic 45.0%
GTGAAATAGGGGTGATCATC+CGG + chr8_1:13666986-13667005 Msa1179930:intron 45.0%
TGAAATAGGGGTGATCATCC+GGG + chr8_1:13666987-13667006 Msa1179930:intron 45.0%
TGATCATCCGGGAATATTGC+CGG + chr8_1:13666998-13667017 Msa1179930:intron 45.0%
TAACATGGCTATCAGCTGCT+GGG - chr8_1:13667045-13667064 None:intergenic 45.0%
CTCGAATCCTTGGAGTTTAG+AGG + chr8_1:13667193-13667212 Msa1179930:intron 45.0%
CAAAGTTCAGACCGAAGGAT+AGG + chr8_1:13667276-13667295 Msa1179930:intron 45.0%
CGACGGTTATTCCTATCCTT+CGG - chr8_1:13667290-13667309 None:intergenic 45.0%
!! TTATCTGGCTCTTCATGGAC+GGG - chr8_1:13667678-13667697 None:intergenic 45.0%
GTCCATGAAGAGCCAGATAA+AGG + chr8_1:13667678-13667697 Msa1179930:CDS 45.0%
!! TGCCTTTATCTGGCTCTTCA+TGG - chr8_1:13667683-13667702 None:intergenic 45.0%
! GAAGAGCCAGATAAAGGCAT+TGG + chr8_1:13667684-13667703 Msa1179930:CDS 45.0%
! TCCTTGGTGTAGCTAGACAA+GGG - chr8_1:13667868-13667887 None:intergenic 45.0%
! TTCCTTGGTGTAGCTAGACA+AGG - chr8_1:13667869-13667888 None:intergenic 45.0%
AATGGAAGAGGCTGGACTTA+AGG + chr8_1:13667901-13667920 Msa1179930:CDS 45.0%
AAGAGGCTGGACTTAAGGAA+AGG + chr8_1:13667906-13667925 Msa1179930:CDS 45.0%
AGAGGCTGGACTTAAGGAAA+GGG + chr8_1:13667907-13667926 Msa1179930:CDS 45.0%
TGGACTTAAGGAAAGGGAAG+TGG + chr8_1:13667913-13667932 Msa1179930:CDS 45.0%
AGGGAAGTGGAAACTCTTCA+AGG + chr8_1:13667926-13667945 Msa1179930:CDS 45.0%
! GTCAATAAGTGCTACTGCCA+AGG + chr8_1:13668118-13668137 Msa1179930:CDS 45.0%
TGCTTGTCTGTCATTCGTGA+TGG - chr8_1:13668200-13668219 None:intergenic 45.0%
CTCCTAAGGGATAACCCTAA+CGG + chr8_1:13668317-13668336 Msa1179930:CDS 45.0%
TTCCGTTAGGGTTATCCCTT+AGG - chr8_1:13668322-13668341 None:intergenic 45.0%
! CCCTAACGGAATGACTTTTG+AGG + chr8_1:13668331-13668350 Msa1179930:CDS 45.0%
! GTCACTGACTACTTTCTCCA+AGG - chr8_1:13668470-13668489 None:intergenic 45.0%
AGGTACCTTCCACTTTCAGT+AGG - chr8_1:13668683-13668702 None:intergenic 45.0%
TTGTACTACATCAGCTCCAC+AGG + chr8_1:13668938-13668957 Msa1179930:CDS 45.0%
TGTACTACATCAGCTCCACA+GGG + chr8_1:13668939-13668958 Msa1179930:CDS 45.0%
GGTACAAAGAGGTTGAAAGC+AGG + chr8_1:13669242-13669261 Msa1179930:CDS 45.0%
TGCAATCGTGGTTTCCAGAA+AGG + chr8_1:13669383-13669402 Msa1179930:CDS 45.0%
ATGCCTGACTGTATCCTTTC+TGG - chr8_1:13669400-13669419 None:intergenic 45.0%
AAGGGTTTCCTAGAGGTCTT+TGG - chr8_1:13669475-13669494 None:intergenic 45.0%
AGGAAACCCTTCCTATCCAT+TGG + chr8_1:13669484-13669503 Msa1179930:CDS 45.0%
TACCATCCCTGAAATTCCTG+GGG - chr8_1:13669658-13669677 None:intergenic 45.0%
CTACCATCCCTGAAATTCCT+GGG - chr8_1:13669659-13669678 None:intergenic 45.0%
ACTACCATCCCTGAAATTCC+TGG - chr8_1:13669660-13669679 None:intergenic 45.0%
AAGTTAAAGGAAGGCCGACA+AGG + chr8_1:13669746-13669765 Msa1179930:CDS 45.0%
AATGTGACTGCGTACCTTGT+CGG - chr8_1:13669763-13669782 None:intergenic 45.0%
ACAAGGTACGCAGTCACATT+TGG + chr8_1:13669763-13669782 Msa1179930:CDS 45.0%
CTCAGGGATAACAACAGAAC+TGG + chr8_1:13669794-13669813 Msa1179930:CDS 45.0%
AACAATGGTTTCTTCGGGAG+TGG - chr8_1:13669906-13669925 None:intergenic 45.0%
CCTGAACTTAATACCGAGGT+TGG - chr8_1:13670055-13670074 None:intergenic 45.0%
CCAACCTCGGTATTAAGTTC+AGG + chr8_1:13670052-13670071 Msa1179930:CDS 45.0%
AAATTGCCAGAAATGAGCCG+TGG + chr8_1:13670214-13670233 Msa1179930:CDS 45.0%
TCAATACCACGGCTCATTTC+TGG - chr8_1:13670223-13670242 None:intergenic 45.0%
!! AGCCGTGGTATTGATTTGGA+TGG + chr8_1:13670229-13670248 Msa1179930:CDS 45.0%
GCCTGATGGAAGAAAGGATT+CGG + chr8_1:13670372-13670391 Msa1179930:CDS 45.0%
ACCGAATCCTTTCTTCCATC+AGG - chr8_1:13670376-13670395 None:intergenic 45.0%
TGCTAAAAGCAAGGGGGATA+AGG + chr8_1:13670863-13670882 Msa1179930:CDS 45.0%
AGGGAATCCTATAGGCAATG+CGG + chr8_1:13670915-13670934 Msa1179930:CDS 45.0%
ATCCTATAGGCAATGCGGAT+CGG + chr8_1:13670920-13670939 Msa1179930:CDS 45.0%
TGTGCTTCATGAAGAACTGG+TGG + chr8_1:13671137-13671156 Msa1179930:CDS 45.0%
CCGGAATTTGAAAAAGGGTC+TGG - chr8_1:13671440-13671459 None:intergenic 45.0%
! TGCTTCGTTTTCACCATTCC+TGG + chr8_1:13671500-13671519 Msa1179930:three_prime_UTR 45.0%
AATGAAGGATCGTCCTCTCC+AGG - chr8_1:13663312-13663331 None:intergenic 50.0%
GGAGAGGACGATCCTTCATT+TGG + chr8_1:13663312-13663331 Msa1179930:CDS 50.0%
CTGTCTGCAGGGAATTTGAC+AGG + chr8_1:13663497-13663516 Msa1179930:intron 50.0%
GGCCTCCCAAGACGAAATTA+TGG + chr8_1:13663626-13663645 Msa1179930:CDS 50.0%
GGCCATAATTTCGTCTTGGG+AGG - chr8_1:13663631-13663650 None:intergenic 50.0%
GTCGGGCCATAATTTCGTCT+TGG - chr8_1:13663635-13663654 None:intergenic 50.0%
CAACAGACACTCCTCGGATT+AGG - chr8_1:13664025-13664044 None:intergenic 50.0%
!! AATCCGAGGAGTGTCTGTTG+CGG + chr8_1:13664025-13664044 Msa1179930:intron 50.0%
TCATGCGGTCGAGTTCATTC+AGG + chr8_1:13664732-13664751 Msa1179930:CDS 50.0%
CGAGTTCATTCAGGCAATCC+AGG + chr8_1:13664741-13664760 Msa1179930:CDS 50.0%
GTTCATTCAGGCAATCCAGG+AGG + chr8_1:13664744-13664763 Msa1179930:CDS 50.0%
CAAGAGCTTGAACTACCTCC+TGG - chr8_1:13664762-13664781 None:intergenic 50.0%
ACCGTTATCTTTACCGCACG+TGG + chr8_1:13665306-13665325 Msa1179930:intron 50.0%
CCCACGTGCGGTAAAGATAA+CGG - chr8_1:13665310-13665329 None:intergenic 50.0%
CCGTTATCTTTACCGCACGT+GGG + chr8_1:13665307-13665326 Msa1179930:intron 50.0%
TTATCTTTACCGCACGTGGG+TGG + chr8_1:13665310-13665329 Msa1179930:intron 50.0%
CGATCTACCGTCTTTCGTCT+TGG + chr8_1:13665594-13665613 Msa1179930:intron 50.0%
TCACGTCAAAATGCGGTCAG+AGG + chr8_1:13665763-13665782 Msa1179930:intron 50.0%
TGCCATTAAAAAGGGCAGCC+CGG - chr8_1:13666358-13666377 None:intergenic 50.0%
!! GGCTTTGTTTGCGTGTTTGG+AGG + chr8_1:13666462-13666481 Msa1179930:intron 50.0%
TTTGCGTGTTTGGAGGGGAA+GGG + chr8_1:13666469-13666488 Msa1179930:intron 50.0%
AGGGGAAGGCTTGGGAAAAA+AGG + chr8_1:13666492-13666511 Msa1179930:intron 50.0%
GAAAATGGGAAGGAGGGCTT+TGG + chr8_1:13666539-13666558 Msa1179930:intron 50.0%
AAATGGGAAGGAGGGCTTTG+GGG + chr8_1:13666541-13666560 Msa1179930:intron 50.0%
TTGGAGGGGAAGGAAAGGAA+AGG - chr8_1:13666815-13666834 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr8_1:13666831-13666850 None:intergenic 50.0%
GATCATCCGGGAATATTGCC+GGG + chr8_1:13666999-13667018 Msa1179930:intron 50.0%
AACTGACCCGGCAATATTCC+CGG - chr8_1:13667008-13667027 None:intergenic 50.0%
CTAACATGGCTATCAGCTGC+TGG - chr8_1:13667046-13667065 None:intergenic 50.0%
! GTTGGAGCTGCTTGCTGAAT+TGG + chr8_1:13667076-13667095 Msa1179930:intron 50.0%
!! AAACTGATTTTGGGAGGGCC+TGG + chr8_1:13667167-13667186 Msa1179930:intron 50.0%
CTCCAAGGATTCGAGAATCC+AGG - chr8_1:13667188-13667207 None:intergenic 50.0%
CAGCTGCCAATGCCTTTATC+TGG - chr8_1:13667693-13667712 None:intergenic 50.0%
!! AAGGCATTGGCAGCTGATGA+AGG + chr8_1:13667697-13667716 Msa1179930:CDS 50.0%
TCCCTTGTCTAGCTACACCA+AGG + chr8_1:13667864-13667883 Msa1179930:intron 50.0%
GTTGGAGGCTCCCATAGATT+TGG + chr8_1:13668089-13668108 Msa1179930:intron 50.0%
CCAAGGGCAAACGTTCTTCA+CGG + chr8_1:13668135-13668154 Msa1179930:CDS 50.0%
TTCCTTTGCTTGCCCTGGTA+GGG - chr8_1:13668253-13668272 None:intergenic 50.0%
TTTCCTTTGCTTGCCCTGGT+AGG - chr8_1:13668254-13668273 None:intergenic 50.0%
!! TCTTTGGAACCTCTTCCCTG+TGG - chr8_1:13668957-13668976 None:intergenic 50.0%
ACAGGGAAGAGGTTCCAAAG+AGG + chr8_1:13668956-13668975 Msa1179930:CDS 50.0%
GTGAAGTCACGGATAGCTCT+AGG + chr8_1:13669141-13669160 Msa1179930:CDS 50.0%
! GGATACAGTCAGGCATTGTC+TGG + chr8_1:13669404-13669423 Msa1179930:CDS 50.0%
GGATAGGAAGGGTTTCCTAG+AGG - chr8_1:13669482-13669501 None:intergenic 50.0%
! GTGAAAGCACAAGGCACAAC+AGG + chr8_1:13669525-13669544 Msa1179930:CDS 50.0%
AGGCACAACAGGAAACACAC+AGG + chr8_1:13669536-13669555 Msa1179930:CDS 50.0%
CAACAGGAAACACACAGGAC+AGG + chr8_1:13669541-13669560 Msa1179930:CDS 50.0%
!!! CCTGGGGACTTTTTTCTTGG+TGG - chr8_1:13669642-13669661 None:intergenic 50.0%
CCACCAAGAAAAAAGTCCCC+AGG + chr8_1:13669639-13669658 Msa1179930:CDS 50.0%
GATACCTCGCCCATTAACAG+TGG - chr8_1:13669834-13669853 None:intergenic 50.0%
GGCACCTCTTCACGTGAATT+AGG - chr8_1:13670355-13670374 None:intergenic 50.0%
!! AGAGGTGCCTGATGGAAGAA+AGG + chr8_1:13670366-13670385 Msa1179930:CDS 50.0%
TACCGATCCGCATTGCCTAT+AGG - chr8_1:13670925-13670944 None:intergenic 50.0%
! CCACCAAACCTCGATTCGAC+TGG - chr8_1:13664988-13665007 None:intergenic 55.0%
CCAGTCGAATCGAGGTTTGG+TGG + chr8_1:13664985-13665004 Msa1179930:intron 55.0%
AATGGCACGGGTTCAAGTCC+TGG + chr8_1:13666236-13666255 Msa1179930:intron 55.0%
ACAAAGCTCCCGCATACGCA+GGG - chr8_1:13666332-13666351 None:intergenic 55.0%
! TATGCGGGAGCTTTGTGCAC+CGG + chr8_1:13666336-13666355 Msa1179930:intron 55.0%
! CACCGGGCTGCCCTTTTTAA+TGG + chr8_1:13666353-13666372 Msa1179930:intron 55.0%
GTTTGCGTGTTTGGAGGGGA+AGG + chr8_1:13666468-13666487 Msa1179930:intron 55.0%
! AATGGGAAGGAGGGCTTTGG+GGG + chr8_1:13666542-13666561 Msa1179930:intron 55.0%
GGAGTTTGGAGGGGAAGGAA+AGG - chr8_1:13666820-13666839 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG - chr8_1:13666825-13666844 None:intergenic 55.0%
GGCCTGGATTCTCGAATCCT+TGG + chr8_1:13667183-13667202 Msa1179930:intron 55.0%
!! AGAGCCATTGACTTGGAGCC+TGG + chr8_1:13667649-13667668 Msa1179930:intron 55.0%
!! GAGCCATTGACTTGGAGCCT+GGG + chr8_1:13667650-13667669 Msa1179930:intron 55.0%
GTTCCCAGGCTCCAAGTCAA+TGG - chr8_1:13667656-13667675 None:intergenic 55.0%
CCGTGAAGAACGTTTGCCCT+TGG - chr8_1:13668138-13668157 None:intergenic 55.0%
ATCCCTACCAGGGCAAGCAA+AGG + chr8_1:13668248-13668267 Msa1179930:CDS 55.0%
ACATCAGCTCCACAGGGAAG+AGG + chr8_1:13668945-13668964 Msa1179930:CDS 55.0%
GTCCCCAGGAATTTCAGGGA+TGG + chr8_1:13669653-13669672 Msa1179930:CDS 55.0%
! TCCTCCACTGTTAATGGGCG+AGG + chr8_1:13669827-13669846 Msa1179930:CDS 55.0%
ACCTCGCCCATTAACAGTGG+AGG - chr8_1:13669831-13669850 None:intergenic 55.0%
! GGATTCTGGAAGGCCAACCT+CGG + chr8_1:13670039-13670058 Msa1179930:CDS 55.0%
AAAGCAGACAGCGCGAACGT+TGG + chr8_1:13670181-13670200 Msa1179930:CDS 55.0%
!! TCACGTGAAGAGGTGCCTGA+TGG + chr8_1:13670358-13670377 Msa1179930:CDS 55.0%
CGGACACGTGTCCTAATCCG+AGG + chr8_1:13664011-13664030 Msa1179930:intron 60.0%
CTGCCGCAACAGACACTCCT+CGG - chr8_1:13664031-13664050 None:intergenic 60.0%
TCTTTACCGCACGTGGGTGG+AGG + chr8_1:13665313-13665332 Msa1179930:intron 60.0%
!! GAGGTTGGTGGCCCCAAAAG+AGG + chr8_1:13665332-13665351 Msa1179930:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr8_1:13666305-13666324 Msa1179930:intron 60.0%
CACAAAGCTCCCGCATACGC+AGG - chr8_1:13666333-13666352 None:intergenic 60.0%
! ATGCGGGAGCTTTGTGCACC+GGG + chr8_1:13666337-13666356 Msa1179930:intron 60.0%
CGTGTTTGGAGGGGAAGGGA+GGG + chr8_1:13666473-13666492 Msa1179930:intron 60.0%
GTGTTTGGAGGGGAAGGGAG+GGG + chr8_1:13666474-13666493 Msa1179930:intron 60.0%
!! ATGGGAAGGAGGGCTTTGGG+GGG + chr8_1:13666543-13666562 Msa1179930:intron 60.0%
! CTCTTCATGGACGGGTTCCC+AGG - chr8_1:13667670-13667689 None:intergenic 60.0%
TACCGCACGTGGGTGGAGGT+TGG + chr8_1:13665317-13665336 Msa1179930:intron 65.0%
CACCAACCTCCACCCACGTG+CGG - chr8_1:13665322-13665341 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr8_1:13666307-13666326 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr8_1:13666320-13666339 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr8_1:13666321-13666340 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + chr8_1:13666320-13666339 Msa1179930:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG + chr8_1:13666321-13666340 Msa1179930:intron 65.0%
! GAGGGTACGACCCCTGGCAA+GGG - chr8_1:13666417-13666436 None:intergenic 65.0%
! AAGGTCGAGGGTACGACCCC+TGG - chr8_1:13666423-13666442 None:intergenic 65.0%
GCGTGTTTGGAGGGGAAGGG+AGG + chr8_1:13666472-13666491 Msa1179930:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+AGG + chr8_1:13666478-13666497 Msa1179930:intron 65.0%
GGGAAGGGAGGGGAAGGCTT+GGG + chr8_1:13666484-13666503 Msa1179930:intron 65.0%
CGCACGTGGGTGGAGGTTGG+TGG + chr8_1:13665320-13665339 Msa1179930:intron 70.0%
CGCATACGCAGGGTCCGGGA+AGG - chr8_1:13666322-13666341 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG - chr8_1:13666326-13666345 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG - chr8_1:13666327-13666346 None:intergenic 70.0%
! CGAGGGTACGACCCCTGGCA+AGG - chr8_1:13666418-13666437 None:intergenic 70.0%
GGGGAAGGGAGGGGAAGGCT+TGG + chr8_1:13666483-13666502 Msa1179930:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 13663282 13671535 13663282 ID=Msa1179930;Name=Msa1179930
chr8_1 mRNA 13663282 13671535 13663282 ID=Msa1179930-mRNA-1;Parent=Msa1179930;Name=Msa1179930-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0.69|0.71|0.92|1|1|14|206|979
chr8_1 exon 13663282 13663467 13663282 ID=Msa1179930-mRNA-1:exon:4932;Parent=Msa1179930-mRNA-1
chr8_1 exon 13663564 13663678 13663564 ID=Msa1179930-mRNA-1:exon:4933;Parent=Msa1179930-mRNA-1
chr8_1 exon 13664346 13664423 13664346 ID=Msa1179930-mRNA-1:exon:4934;Parent=Msa1179930-mRNA-1
chr8_1 exon 13664695 13664806 13664695 ID=Msa1179930-mRNA-1:exon:4935;Parent=Msa1179930-mRNA-1
chr8_1 exon 13667651 13667718 13667651 ID=Msa1179930-mRNA-1:exon:4936;Parent=Msa1179930-mRNA-1
chr8_1 exon 13667876 13667947 13667876 ID=Msa1179930-mRNA-1:exon:4937;Parent=Msa1179930-mRNA-1
chr8_1 exon 13668090 13668352 13668090 ID=Msa1179930-mRNA-1:exon:4938;Parent=Msa1179930-mRNA-1
chr8_1 exon 13668466 13668534 13668466 ID=Msa1179930-mRNA-1:exon:4939;Parent=Msa1179930-mRNA-1
chr8_1 exon 13668614 13668696 13668614 ID=Msa1179930-mRNA-1:exon:4940;Parent=Msa1179930-mRNA-1
chr8_1 exon 13668920 13670521 13668920 ID=Msa1179930-mRNA-1:exon:4941;Parent=Msa1179930-mRNA-1
chr8_1 exon 13670649 13670726 13670649 ID=Msa1179930-mRNA-1:exon:4942;Parent=Msa1179930-mRNA-1
chr8_1 exon 13670827 13670941 13670827 ID=Msa1179930-mRNA-1:exon:4943;Parent=Msa1179930-mRNA-1
chr8_1 exon 13671108 13671158 13671108 ID=Msa1179930-mRNA-1:exon:4944;Parent=Msa1179930-mRNA-1
chr8_1 exon 13671282 13671535 13671282 ID=Msa1179930-mRNA-1:exon:4945;Parent=Msa1179930-mRNA-1
chr8_1 CDS 13663282 13663467 13663282 ID=Msa1179930-mRNA-1:cds;Parent=Msa1179930-mRNA-1
chr8_1 CDS 13663564 13663678 13663564 ID=Msa1179930-mRNA-1:cds;Parent=Msa1179930-mRNA-1
chr8_1 CDS 13664346 13664423 13664346 ID=Msa1179930-mRNA-1:cds;Parent=Msa1179930-mRNA-1
chr8_1 CDS 13664695 13664806 13664695 ID=Msa1179930-mRNA-1:cds;Parent=Msa1179930-mRNA-1
chr8_1 CDS 13667651 13667718 13667651 ID=Msa1179930-mRNA-1:cds;Parent=Msa1179930-mRNA-1
chr8_1 CDS 13667876 13667947 13667876 ID=Msa1179930-mRNA-1:cds;Parent=Msa1179930-mRNA-1
chr8_1 CDS 13668090 13668352 13668090 ID=Msa1179930-mRNA-1:cds;Parent=Msa1179930-mRNA-1
chr8_1 CDS 13668466 13668534 13668466 ID=Msa1179930-mRNA-1:cds;Parent=Msa1179930-mRNA-1
chr8_1 CDS 13668614 13668696 13668614 ID=Msa1179930-mRNA-1:cds;Parent=Msa1179930-mRNA-1
chr8_1 CDS 13668920 13670521 13668920 ID=Msa1179930-mRNA-1:cds;Parent=Msa1179930-mRNA-1
chr8_1 CDS 13670649 13670726 13670649 ID=Msa1179930-mRNA-1:cds;Parent=Msa1179930-mRNA-1
chr8_1 CDS 13670827 13670941 13670827 ID=Msa1179930-mRNA-1:cds;Parent=Msa1179930-mRNA-1
chr8_1 CDS 13671108 13671158 13671108 ID=Msa1179930-mRNA-1:cds;Parent=Msa1179930-mRNA-1
chr8_1 CDS 13671282 13671329 13671282 ID=Msa1179930-mRNA-1:cds;Parent=Msa1179930-mRNA-1
chr8_1 three_prime_UTR 13671330 13671535 13671330 ID=Msa1179930-mRNA-1:three_prime_utr;Parent=Msa1179930-mRNA-1
Gene Sequence

>Msa1179930

TTGGTGAAGACATTCTTAGATAATGGACCTGGAGAGGACGATCCTTCATTTGGTGAAGAAATTGTTTCTCAGCTTTCTATTGATGCTCAAGATTTGTCTCATACTCAACAGGTGAAAAGGAAGAAAATGGTTGTTAAAAGACGGAGAGAGGAATGGGCAGATACTTATAAATGGGCTTATGTCGATATGAGTGCCCTCGAAGAATACAATAATAGTTTGCTTCATAAAGAGGCTCTTCGTCTTCAATCGGCCTCCCAAGACGAAATTATGGCCCGACAATACAAGCCTGTTTATGTAAAAGATTCAGTTTTATCTCCTCTCTCAATCTCTGACTTTGTTATGGAGTTTCTTAATCTTGACTTCTTTGAGGTTCCACAAGTGGGATCAATTCTTGAAGCTACACTAAAAAGGGAATCTCATGCGGTCGAGTTCATTCAGGCAATCCAGGAGGTAGTTCAAGCTCTTGAGAGAGTCATCAGGAGAAATTCTCAAGCCATTGACTTGGAGCCTGGGAACCCGTCCATGAAGAGCCAGATAAAGGCATTGGCAGCTGATGAAGCTACACCAAGGAAGAATTACGATAAAATGGAAGAGGCTGGACTTAAGGAAAGGGAAGTGGAAACTCTTCAAGTTGGAGGCTCCCATAGATTTGGATTGATGTCAATAAGTGCTACTGCCAAGGGCAAACGTTCTTCACGGAGAGCTGCAAATATCTCTAAAAGCCTTTATGATGTTGTGCCATCACGAATGACAGACAAGCAAGACACCAATACTGTTTTTGAGAAAGAAATCCCTACCAGGGCAAGCAAAGGAAATAATGGATCTAAACCAATAGATTTGCAGAGAATGTTAATTTCTCTCCTAAGGGATAACCCTAACGGAATGACTTTTGAGGCCTTGGAGAAAGTAGTCAGTGACACACATCCAAGTTTCATACAGGATCTTGAGCCCACTATAAAAAGAATTGCAAAATATATCCCTGGAAGGTATATTTTAAAGCCAGAAGTGGATTCAGAAAGCTTCAAGAAACCTACTGAAAGTGGAAGTTTCTTCAAAATCAAATATTGTACTACATCAGCTCCACAGGGAAGAGGTTCCAAAGAGGAAGTTCCAAATGACGATTTGGAGGAAACAATGCAAGTAAAATCCAAAGTGAAAGAAGAATCAAACACATTGGAAAAAATTGATATGAAACATGCTTCACATGATTATCAACAGCTGAAGGAGCGCAAAAGTTATATGGGGAGTTTGTTTGATGAAAGGGAAAGTGAAGTCACGGATAGCTCTAGGAACGAACAGTCTGATAGCCTATCTAAAGGTAAACATAAGAGGGGTTCAGAATTGACGAACATTGATGAGAAATCTGAAGGTACAAAGAGGTTGAAAGCAGGACACTTGACTCGTGAATCATATTCTCTAGGTACAGATGTGAAAATGTTTGGGAACTCTAGAATTTTTTCACCATTTGAACTTACTGAAGACTCTGGTAGAGCTGACAGACAAAGAAACTGCAATCGTGGTTTCCAGAAAGGATACAGTCAGGCATTGTCTGGAAAATCTAGTTCAGATTTACGAAAAACAGGTCAAAGGTCTTTTGACCAAAGACCTCTAGGAAACCCTTCCTATCCATTGGAAAAATCAGATAAACTTGGTGAAAGCACAAGGCACAACAGGAAACACACAGGACAGGACTTCCGTACACATGAAGTTTCTTTTGTGCCGGAAAATAAATCTCTTAAAGATGCTCAAAATGAAGATATTTATGCCACCAAGAAAAAAGTCCCCAGGAATTTCAGGGATGGTAGTAACGGAACTAAGCAGTCACTATTATCAGTGGATTCTAATTACCAAAAACACAGTGAAATGGTTGGTAAGTTAAAGGAAGGCCGACAAGGTACGCAGTCACATTTGGAAAAATTGCTCAGGGATAACAACAGAACTGGTCTTGTTAAATCCTCCACTGTTAATGGGCGAGGTATCTCGCTTAAGAGAGAGCTTTCAGACTTGGATTTGGGAGAACTTCATGAGTCCACTCCCGAAGAAACCATTGTTGCAAAGCAATTTGAACGAAATGGTTCGTTTAAACATATGGGAATCAAAGCAAACACTTCAGAGGACATGAATTCAAATATCACTGAAGTAAAACCTTTATTGAAAACAACTTTGGATTCTGGAAGGCCAACCTCGGTATTAAGTTCAGGTTTTCCTAGCATTTTGGACAACACAAATGAAAAGAATGTTGATAATCATTTTGAAGATTCAACAAAGTCTCGTTGTAGCGTTACACAAACTCATTCACATCATTTGAAAGCAGACAGCGCGAACGTTGGATCTCAAAAAAAATTGCCAGAAATGAGCCGTGGTATTGATTTGGATGGTTGCAGGGAAACCAATAGAAGAGTGCCTGCAAATAGATCTAAGCAAGATACAAAACATGGAATGGTTCCCTACCCTGTGAAAGAAAGTAAGATACAAACACCTAATTCACGTGAAGAGGTGCCTGATGGAAGAAAGGATTCGGTATTTGCAAATAGAAATAATGGTGACCAAAAGAAGAAAGAGTTATCCTCGGATGAAAATAGTTGCTCTTATTCAAAGTTTGAAAAGGAGGAACCTGAATTAAAGGGACCTATAACGACTTTTTCCCAATATAAAGAATATGTGCAGGATTACCAGGGTAAATACGAGAGTTACATCTCCTTACACAAGATTTTGAAGGAATACAGGGTTGAGTTTCAGAAACTAGGTGATGATTTAGAGAATGCTAAAAGCAAGGGGGATAAGGATAGATATGACGGCATTGCAACACAAATTAGGGAATCCTATAGGCAATGCGGATCGAGACAAAACAGACTGAAGAAAATATTTATTGTGCTTCATGAAGAACTGGTGAATACGAAGCAAAGGATCAGAGACTTTGTTCAGTCTAATAAAGATTGA
Protein sequence

>Msa1179930

LVKTFLDNGPGEDDPSFGEEIVSQLSIDAQDLSHTQQVKRKKMVVKRRREEWADTYKWAYVDMSALEEYNNSLLHKEALRLQSASQDEIMARQYKPVYVKDSVLSPLSISDFVMEFLNLDFFEVPQVGSILEATLKRESHAVEFIQAIQEVVQALERVIRRNSQAIDLEPGNPSMKSQIKALAADEATPRKNYDKMEEAGLKEREVETLQVGGSHRFGLMSISATAKGKRSSRRAANISKSLYDVVPSRMTDKQDTNTVFEKEIPTRASKGNNGSKPIDLQRMLISLLRDNPNGMTFEALEKVVSDTHPSFIQDLEPTIKRIAKYIPGRYILKPEVDSESFKKPTESGSFFKIKYCTTSAPQGRGSKEEVPNDDLEETMQVKSKVKEESNTLEKIDMKHASHDYQQLKERKSYMGSLFDERESEVTDSSRNEQSDSLSKGKHKRGSELTNIDEKSEGTKRLKAGHLTRESYSLGTDVKMFGNSRIFSPFELTEDSGRADRQRNCNRGFQKGYSQALSGKSSSDLRKTGQRSFDQRPLGNPSYPLEKSDKLGESTRHNRKHTGQDFRTHEVSFVPENKSLKDAQNEDIYATKKKVPRNFRDGSNGTKQSLLSVDSNYQKHSEMVGKLKEGRQGTQSHLEKLLRDNNRTGLVKSSTVNGRGISLKRELSDLDLGELHESTPEETIVAKQFERNGSFKHMGIKANTSEDMNSNITEVKPLLKTTLDSGRPTSVLSSGFPSILDNTNEKNVDNHFEDSTKSRCSVTQTHSHHLKADSANVGSQKKLPEMSRGIDLDGCRETNRRVPANRSKQDTKHGMVPYPVKESKIQTPNSREEVPDGRKDSVFANRNNGDQKKKELSSDENSCSYSKFEKEEPELKGPITTFSQYKEYVQDYQGKYESYISLHKILKEYRVEFQKLGDDLENAKSKGDKDRYDGIATQIRESYRQCGSRQNRLKKIFIVLHEELVNTKQRIRDFVQSNKD*