AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0283450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0283450 MtrunA17_Chr2g0298701 93.166 717 32 3 1 710 1 707 0.0 1300
Msa0283450 MtrunA17_Chr1g0207661 47.210 233 115 3 139 371 245 469 4.26e-58 211
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0283450 AT4G29940.1 58.118 425 158 5 136 546 97 515 1.19e-155 471
Msa0283450 AT4G29940.2 58.118 425 158 5 136 546 97 515 1.33e-155 469
Msa0283450 AT3G19510.1 47.177 248 121 3 123 369 158 396 5.17e-61 218
Msa0283450 AT3G19510.2 47.177 248 121 3 123 369 158 396 5.17e-61 218

Find 144 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGAAGCATCACAATCTTTA+AGG 0.134962 2_3:-20630801 None:intergenic
CCCAAGTGTGGAGGTATTTC+TGG 0.146341 2_3:-20635742 None:intergenic
AGGGCGTCCTTCACGGATTT+TGG 0.158407 2_3:-20635072 None:intergenic
GATGGATAGGAAATTGAAAT+TGG 0.159981 2_3:-20630872 None:intergenic
AAGAACAATGATAGAATAAA+AGG 0.187496 2_3:+20634834 Msa0283450:CDS
TCCAGCATGTGGTCTTTAAA+TGG 0.227946 2_3:+20634064 Msa0283450:CDS
ATCCTTGGTTGGCACCTTAT+TGG 0.235926 2_3:-20632315 None:intergenic
CAAAACCAGCCTTGGTCTTC+AGG 0.247836 2_3:-20633321 None:intergenic
CCTCCACACTTGGGAGAAAA+TGG 0.255233 2_3:+20635751 Msa0283450:CDS
CTATCATTGTTCTTATTATT+CGG 0.255964 2_3:-20634825 None:intergenic
CTGAAATTGAAGAGAAAATA+TGG 0.293844 2_3:-20631010 None:intergenic
AACCTGCCAAGTACTGTCTA+AGG 0.296673 2_3:-20633409 None:intergenic
TCAGTCTGTCTTTCTTCCTT+TGG 0.302813 2_3:-20632229 None:intergenic
TGGCTTTCTTCCTTCCTCTC+TGG 0.343007 2_3:-20633983 None:intergenic
AGATATTCCTTGTTCTTCTC+TGG 0.348606 2_3:-20632547 None:intergenic
TGACTGTAAGATAGAAATAT+TGG 0.355208 2_3:+20633353 Msa0283450:CDS
GGATTATAGTCATCGTCTTC+AGG 0.355847 2_3:-20633962 None:intergenic
TTTCGAAAGGGCGTCCTTCA+CGG 0.358216 2_3:-20635079 None:intergenic
AGCTACTGATTCTTCCAATA+AGG 0.369588 2_3:+20632301 Msa0283450:CDS
AGAATAAAAGGGAATTCTTC+AGG 0.374854 2_3:+20634846 Msa0283450:CDS
CAGAGTATAATATCATTATC+TGG 0.390452 2_3:-20633131 None:intergenic
CTTTAAGGTTCTTGTTGTGT+TGG 0.395929 2_3:-20630786 None:intergenic
GAAGATGAAGATTGGGGTCC+TGG 0.398942 2_3:+20634726 Msa0283450:CDS
AGATTGAAGCAAAGATTAAC+TGG 0.399258 2_3:+20636632 Msa0283450:CDS
GGACGCCCTTTCGAAAGAAA+TGG 0.401279 2_3:+20635086 Msa0283450:CDS
ATGGATAGGAAATTGAAATT+GGG 0.404420 2_3:-20630871 None:intergenic
TATCCATCATTCAATCGAAA+AGG 0.404944 2_3:+20630887 Msa0283450:five_prime_UTR
AAGAAGTGTGAAAATGTTAC+TGG 0.405838 2_3:+20635673 Msa0283450:CDS
ATGTTCCTATAGCTGAGTTA+AGG 0.407231 2_3:+20636714 Msa0283450:CDS
AAACTTCTCTTAATCATGAT+AGG 0.417638 2_3:+20632414 Msa0283450:CDS
AGTTCAGTTGGTAGTATTGA+AGG 0.418881 2_3:+20632933 Msa0283450:CDS
CACATAGATTCTGATGAATC+CGG 0.421682 2_3:+20634139 Msa0283450:CDS
CCGTGATGCCATTCACCAAC+TGG 0.421979 2_3:+20632902 Msa0283450:CDS
GAGATGTCTTGATCCTCCTT+TGG 0.422829 2_3:+20633184 Msa0283450:CDS
AGATTCCCAATGTTGATACT+AGG 0.428050 2_3:-20630844 None:intergenic
AGTGAGTGAAGATGAAGATT+GGG 0.435286 2_3:+20634719 Msa0283450:CDS
CCCCTTAGACAGTACTTGGC+AGG 0.439188 2_3:+20633407 Msa0283450:CDS
ATAGGAACATACATAATAGA+TGG 0.443496 2_3:-20636701 None:intergenic
GGAGTTCAAAATTGCAGATC+GGG 0.444432 2_3:+20636653 Msa0283450:CDS
CGATAATGCAGGTTAACAAA+TGG 0.446754 2_3:+20635287 Msa0283450:intron
ACATGTTCCTTTGTGTTACT+CGG 0.451425 2_3:-20632158 None:intergenic
TGTTCCTATAGCTGAGTTAA+GGG 0.455270 2_3:+20636715 Msa0283450:CDS
TAATGAAACTATTGCAAGAA+AGG 0.457497 2_3:+20636519 Msa0283450:CDS
AGACTCCGAGGCAGCAGAGT+TGG 0.457827 2_3:+20636571 Msa0283450:CDS
AAGTGAGTGAAGATGAAGAT+TGG 0.458660 2_3:+20634718 Msa0283450:CDS
AGGCAACAAACGCGCATCTT+GGG 0.460252 2_3:+20633376 Msa0283450:CDS
GAGGCAACAAACGCGCATCT+TGG 0.466032 2_3:+20633375 Msa0283450:CDS
AAATTCCAACTCTGCTGCCT+CGG 0.470562 2_3:-20636576 None:intergenic
CTGGATTCTCTTAGTTCAGT+TGG 0.473153 2_3:+20632921 Msa0283450:CDS
ATTTCCCCTTAGACAGTACT+TGG 0.477866 2_3:+20633403 Msa0283450:CDS
AAAGTCTACATAAAACTGAT+AGG 0.478611 2_3:+20632366 Msa0283450:CDS
GGTAATAATACATTAATGTA+TGG 0.479759 2_3:+20636800 Msa0283450:three_prime_UTR
TTCCTCCTGAAGACCAAGGC+TGG 0.484945 2_3:+20633316 Msa0283450:CDS
CAAGTCCCATTTCTTTCGAA+AGG 0.486339 2_3:-20635092 None:intergenic
TATAGCTGAGTTAAGGGAAA+AGG 0.488966 2_3:+20636721 Msa0283450:CDS
GAAAATTTATAACTTCAAAC+CGG 0.490601 2_3:-20636855 None:intergenic
AGAACAATGATAGAATAAAA+GGG 0.492512 2_3:+20634835 Msa0283450:CDS
GACGCCCTTTCGAAAGAAAT+GGG 0.493793 2_3:+20635087 Msa0283450:CDS
AGTAATGCAGCATCGCCGTC+AGG 0.494282 2_3:-20633908 None:intergenic
ACCAGAAATACCTCCACACT+TGG 0.495132 2_3:+20635741 Msa0283450:CDS
AAGTCCCATTTCTTTCGAAA+GGG 0.495232 2_3:-20635091 None:intergenic
CTTCTGTGTTGATGCCACCA+TGG 0.498525 2_3:-20634003 None:intergenic
TACTAAATCAAGAAGAAGAA+TGG 0.501022 2_3:+20633927 Msa0283450:CDS
GTACAATGAAATGAAGCAAC+CGG 0.503191 2_3:+20636836 Msa0283450:three_prime_UTR
CTCCAGCGTAAGCATCGATA+AGG 0.509397 2_3:-20632595 None:intergenic
TTATTTGAAGAATCCTTGGT+TGG 0.511651 2_3:-20632326 None:intergenic
ATCCATCATTCAATCGAAAA+GGG 0.514565 2_3:+20630888 Msa0283450:five_prime_UTR
ACGACCACATGCTATTTCCC+CGG 0.515781 2_3:-20634158 None:intergenic
ATCGATGCTTACGCTGGAGA+AGG 0.517287 2_3:+20632599 Msa0283450:CDS
GTCACAGTCGAGAGAAGATT+AGG 0.517689 2_3:+20632823 Msa0283450:intron
TTCTACATCACAACATGTGC+AGG 0.518102 2_3:+20635597 Msa0283450:CDS
CATGGCACTTAAAATGAGAA+AGG 0.518506 2_3:+20635327 Msa0283450:CDS
TCCATTTAAAGACCACATGC+TGG 0.518896 2_3:-20634065 None:intergenic
AAGAGAATCCAGTTGGTGAA+TGG 0.519329 2_3:-20632910 None:intergenic
GGTCGTTAGAATAATATTCA+AGG 0.522036 2_3:-20634117 None:intergenic
AGAGAAGATTAGGCCAGAAA+AGG 0.525646 2_3:+20632833 Msa0283450:CDS
ACGTAAATAGATTAATATGC+GGG 0.526006 2_3:+20632100 Msa0283450:exon
AAGGAGGATCAAGACATCTC+TGG 0.528780 2_3:-20633181 None:intergenic
ACATAGATTCTGATGAATCC+GGG 0.537290 2_3:+20634140 Msa0283450:CDS
ACATACCTAGTATCAACATT+GGG 0.539661 2_3:+20630839 Msa0283450:five_prime_UTR
AAAGGAACATGTCAAGTTGA+AGG 0.541741 2_3:+20632169 Msa0283450:CDS
GGTTCTGTCATTGCTACAGA+TGG 0.542741 2_3:+20632954 Msa0283450:CDS
ACCTGCCAAGTACTGTCTAA+GGG 0.543897 2_3:-20633408 None:intergenic
AACCTTATCGATGCTTACGC+TGG 0.549016 2_3:+20632593 Msa0283450:CDS
CACATACCTAGTATCAACAT+TGG 0.553170 2_3:+20630838 Msa0283450:five_prime_UTR
AATACTTGCAAAACCAGCCT+TGG 0.554312 2_3:-20633329 None:intergenic
ATGCTTACGCTGGAGAAGGT+TGG 0.555448 2_3:+20632603 Msa0283450:CDS
TATTCCTTGTTCTTCTCTGG+AGG 0.556906 2_3:-20632544 None:intergenic
TGGAGTTCAAAATTGCAGAT+CGG 0.560560 2_3:+20636652 Msa0283450:CDS
GAATGTTCTATGTTAGATGA+AGG 0.561374 2_3:+20634088 Msa0283450:CDS
GAGAAGAGAAAAGGAGTCTG+AGG 0.568921 2_3:+20634758 Msa0283450:CDS
TCTTCACTCACTTGTTCACA+AGG 0.570005 2_3:-20634708 None:intergenic
GAAAATTATGATTCATGTGG+TGG 0.575125 2_3:+20636918 Msa0283450:three_prime_UTR
AACATCATCACTGACCTCCA+TGG 0.580335 2_3:-20636492 None:intergenic
TGACTATAATCCAGAGAGGA+AGG 0.581091 2_3:+20633973 Msa0283450:CDS
GGGAAATAGCATGTGGTCGT+AGG 0.581992 2_3:+20634161 Msa0283450:CDS
AGGAAAGGTGAGATAGATGT+TGG 0.583618 2_3:+20632434 Msa0283450:CDS
ACAACATGTGCAGGAAGAAG+AGG 0.585587 2_3:+20635606 Msa0283450:CDS
AATGGGACTTGATGCTGCAA+AGG 0.589378 2_3:+20635104 Msa0283450:CDS
AATGATATTATACTCTGTGA+TGG 0.590683 2_3:+20633137 Msa0283450:CDS
GATAGATGTTGGTGATCAAG+AGG 0.591239 2_3:+20632445 Msa0283450:CDS
TTTGTTTAGCTTCAAGAAGG+AGG 0.591319 2_3:+20635535 Msa0283450:intron
CAAGTAGCACAAAACACCAA+AGG 0.591492 2_3:+20632213 Msa0283450:CDS
TCTCTTAATCATGATAGGAA+AGG 0.591668 2_3:+20632419 Msa0283450:CDS
CAAGTAGTTCTTCCAGCATG+TGG 0.596343 2_3:+20634053 Msa0283450:CDS
TTCCAATAAGGTGCCAACCA+AGG 0.598203 2_3:+20632313 Msa0283450:CDS
CTGTAAGATAGAAATATTGG+AGG 0.603472 2_3:+20633356 Msa0283450:CDS
CCAGTTGGTGAATGGCATCA+CGG 0.605629 2_3:-20632902 None:intergenic
AAATCAAAATCTCATAAACT+CGG 0.606698 2_3:+20632251 Msa0283450:CDS
TACGCTGGAGAAGGTTGGAA+AGG 0.611602 2_3:+20632608 Msa0283450:CDS
CATGGTGGCATCAACACAGA+AGG 0.612139 2_3:+20634004 Msa0283450:CDS
GAAGAAGCTGCTATTCCTGA+CGG 0.614571 2_3:+20633893 Msa0283450:CDS
TATCACTTCTAAGAACTCAA+AGG 0.617285 2_3:+20635573 Msa0283450:CDS
CGGAGGTTGCACAAATGTGT+CGG 0.617900 2_3:+20632271 Msa0283450:CDS
CTGAACTAAGAGAATCCAGT+TGG 0.618760 2_3:-20632917 None:intergenic
CTGTCTTCAGTCTCCAAAGG+AGG 0.618854 2_3:-20633197 None:intergenic
TCACTGTCTTCAGTCTCCAA+AGG 0.619248 2_3:-20633200 None:intergenic
CGGATTCATCAGAATCTATG+TGG 0.622262 2_3:-20634138 None:intergenic
AGGAATTCAACAAAGATACA+AGG 0.629477 2_3:+20632386 Msa0283450:CDS
CCTGCCAAGTACTGTCTAAG+GGG 0.632462 2_3:-20633407 None:intergenic
GAGAGGAAGGAAGAAAGCCA+TGG 0.637015 2_3:+20633986 Msa0283450:CDS
ACTGAGAAGTTAAATAACCA+AGG 0.637280 2_3:+20632125 Msa0283450:CDS
CTTGGGAGAAAATGGCAACA+AGG 0.637413 2_3:+20635759 Msa0283450:CDS
TCATGTGAAAACCTAAAACA+AGG 0.637563 2_3:-20634879 None:intergenic
TCGTCTTCAGGATCATCTGA+CGG 0.640667 2_3:-20633950 None:intergenic
TACGTAAATAGATTAATATG+CGG 0.644745 2_3:+20632099 Msa0283450:exon
CCAGAAATACCTCCACACTT+GGG 0.646657 2_3:+20635742 Msa0283450:CDS
GAGAAGGTTGGAAAGGTCAG+AGG 0.649501 2_3:+20632615 Msa0283450:CDS
AGGAAGGAAGAAAGCCATGG+TGG 0.650653 2_3:+20633989 Msa0283450:CDS
GTGAGTGAAGATGAAGATTG+GGG 0.652036 2_3:+20634720 Msa0283450:CDS
AACCAGCCTTGGTCTTCAGG+AGG 0.652976 2_3:-20633318 None:intergenic
CATAGATTCTGATGAATCCG+GGG 0.669012 2_3:+20634141 Msa0283450:CDS
TACAAAACCGAGTAACACAA+AGG 0.669844 2_3:+20632151 Msa0283450:CDS
GCTTCCTCCAAAATCCGTGA+AGG 0.670380 2_3:+20635065 Msa0283450:CDS
GCAGTTCCTCCTGAAGACCA+AGG 0.671156 2_3:+20633312 Msa0283450:intron
TCACTCACTTGTTCACAAGG+TGG 0.675741 2_3:-20634705 None:intergenic
TGCATTTGAAGGAGACTCCG+AGG 0.681549 2_3:+20636559 Msa0283450:CDS
TCAAAATCTCATAAACTCGG+AGG 0.684427 2_3:+20632254 Msa0283450:CDS
ATGGAAAATTATGATTCATG+TGG 0.684751 2_3:+20636915 Msa0283450:three_prime_UTR
TTATCTTCAGGATTCCATGG+AGG 0.700522 2_3:+20636478 Msa0283450:intron
GAATCCGGGGAAATAGCATG+TGG 0.711313 2_3:+20634154 Msa0283450:CDS
AATTCAACAAAGATACAAGG+AGG 0.723347 2_3:+20632389 Msa0283450:CDS
ACGATGACTATAATCCAGAG+AGG 0.733914 2_3:+20633969 Msa0283450:CDS
TACGCCTCCAGAGAAGAACA+AGG 0.736747 2_3:+20632540 Msa0283450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATTGATTTAAAACAAA+AGG - chr2_3:20631142-20631161 None:intergenic 10.0%
!! TTTGTAAAAAAAAATTTACA+CGG + chr2_3:20633589-20633608 Msa0283450:intron 10.0%
!!! GAAAAAACATTTATTATTTT+TGG - chr2_3:20633847-20633866 None:intergenic 10.0%
!! ATAAATGATCATATAAATAA+AGG + chr2_3:20634331-20634350 Msa0283450:intron 10.0%
!!! TCTTTGTATGATTTTATATA+TGG + chr2_3:20631693-20631712 Msa0283450:intron 15.0%
!! CTGTATATAATCATTAAAAA+TGG + chr2_3:20631856-20631875 Msa0283450:intron 15.0%
!!! TATCTTATTATTTTCTAACA+TGG + chr2_3:20631912-20631931 Msa0283450:intron 15.0%
!! GTTAGATCATTAAAAATATT+AGG - chr2_3:20633700-20633719 None:intergenic 15.0%
!!! TTTTATAATTTATCTTGAAG+AGG + chr2_3:20634506-20634525 Msa0283450:intron 15.0%
!!! TTTAAATATTTGTTTTCAGT+TGG - chr2_3:20634972-20634991 None:intergenic 15.0%
!! CACTAATAAAAGAAAAAAAA+AGG - chr2_3:20635380-20635399 None:intergenic 15.0%
!! AATTAAACAATTCTTACAAA+AGG - chr2_3:20635404-20635423 None:intergenic 15.0%
!!! TAGTTTTAAATCCTATAATA+AGG + chr2_3:20635440-20635459 Msa0283450:intron 15.0%
!!! TTAATAAATTGTTTTGTTCT+TGG + chr2_3:20635482-20635501 Msa0283450:intron 15.0%
!!! CTTTTTTTTTTACATTTAAC+AGG - chr2_3:20636246-20636265 None:intergenic 15.0%
!! ACTAAATAAAAAACAGTTAT+TGG - chr2_3:20636345-20636364 None:intergenic 15.0%
!! TACGTAAATAGATTAATATG+CGG + chr2_3:20632099-20632118 Msa0283450:exon 20.0%
!! AAATCAAAATCTCATAAACT+CGG + chr2_3:20632251-20632270 Msa0283450:CDS 20.0%
!! TAATAACTAACAATTCAAGA+AGG - chr2_3:20632737-20632756 None:intergenic 20.0%
!!! GTTTTTTCTGTCAAAAATTA+AGG + chr2_3:20633859-20633878 Msa0283450:intron 20.0%
!! AAAAATTAAGGATGTATTCA+AGG + chr2_3:20633871-20633890 Msa0283450:intron 20.0%
!!! ATAAAGGTACTATTTAAAAC+AGG + chr2_3:20634347-20634366 Msa0283450:intron 20.0%
!!! TTTGTTTTATCTGTTGTTAT+AGG - chr2_3:20634432-20634451 None:intergenic 20.0%
!!! TTATGAAAATAAGTTGAAAC+CGG + chr2_3:20634529-20634548 Msa0283450:intron 20.0%
!! CTATCATTGTTCTTATTATT+CGG - chr2_3:20634828-20634847 None:intergenic 20.0%
!! AAGAACAATGATAGAATAAA+AGG + chr2_3:20634834-20634853 Msa0283450:CDS 20.0%
!! AGAACAATGATAGAATAAAA+GGG + chr2_3:20634835-20634854 Msa0283450:CDS 20.0%
!! GGTAATAATACATTAATGTA+TGG + chr2_3:20636800-20636819 Msa0283450:three_prime_UTR 20.0%
!! GAAAATTTATAACTTCAAAC+CGG - chr2_3:20636858-20636877 None:intergenic 20.0%
!!! CATATTTTCATTTTGTTCTA+TGG + chr2_3:20636896-20636915 Msa0283450:three_prime_UTR 20.0%
! ATGGATAGGAAATTGAAATT+GGG - chr2_3:20630874-20630893 None:intergenic 25.0%
! CTGAAATTGAAGAGAAAATA+TGG - chr2_3:20631013-20631032 None:intergenic 25.0%
!! CATATTTTCTCTTCAATTTC+AGG + chr2_3:20631011-20631030 Msa0283450:five_prime_UTR 25.0%
!!! TTGTTTTGGATTTTTACTTG+TGG + chr2_3:20631075-20631094 Msa0283450:intron 25.0%
!!! TGTTTTGGATTTTTACTTGT+GGG + chr2_3:20631076-20631095 Msa0283450:intron 25.0%
! ATAAAACGAAAACGAATGAA+TGG - chr2_3:20631775-20631794 None:intergenic 25.0%
!! ATAAGTAGTTCTTTGACTTA+TGG - chr2_3:20631940-20631959 None:intergenic 25.0%
! TTACTATTATGACTGTATCA+GGG + chr2_3:20632072-20632091 Msa0283450:intron 25.0%
! ACGTAAATAGATTAATATGC+GGG + chr2_3:20632100-20632119 Msa0283450:exon 25.0%
!!! TCTTTTATTTGAAGAATCCT+TGG - chr2_3:20632333-20632352 None:intergenic 25.0%
! AAAGTCTACATAAAACTGAT+AGG + chr2_3:20632366-20632385 Msa0283450:CDS 25.0%
! AAACTTCTCTTAATCATGAT+AGG + chr2_3:20632414-20632433 Msa0283450:CDS 25.0%
!! ATCTCATTCTATGGATTAAA+AGG - chr2_3:20632706-20632725 None:intergenic 25.0%
! AAAAATGTTTCAACACAATG+AGG - chr2_3:20633054-20633073 None:intergenic 25.0%
! CAGAGTATAATATCATTATC+TGG - chr2_3:20633134-20633153 None:intergenic 25.0%
! AATGATATTATACTCTGTGA+TGG + chr2_3:20633137-20633156 Msa0283450:CDS 25.0%
! TGACTGTAAGATAGAAATAT+TGG + chr2_3:20633353-20633372 Msa0283450:CDS 25.0%
! CTTAAAAGTCATGCAAATAA+TGG - chr2_3:20633512-20633531 None:intergenic 25.0%
!!! ATTTGCATGACTTTTAAGTT+AGG + chr2_3:20633514-20633533 Msa0283450:intron 25.0%
! ATCAGTTAATCATAAACTGT+TGG - chr2_3:20633569-20633588 None:intergenic 25.0%
! GAAGTAAAAATCTGAAGATT+TGG - chr2_3:20633666-20633685 None:intergenic 25.0%
!! AGATTTTTACTTCCTTCTAT+TGG + chr2_3:20633673-20633692 Msa0283450:intron 25.0%
! AAAATATTAGGACCAATAGA+AGG - chr2_3:20633688-20633707 None:intergenic 25.0%
! GAAGTGAAAATCAAAATACT+TGG - chr2_3:20633813-20633832 None:intergenic 25.0%
!!! ATTATTTTTGGACCAATAGA+AGG - chr2_3:20633835-20633854 None:intergenic 25.0%
! TACTAAATCAAGAAGAAGAA+TGG + chr2_3:20633927-20633946 Msa0283450:CDS 25.0%
! TCAAATAAGTTAATCCAAAC+CGG + chr2_3:20634628-20634647 Msa0283450:intron 25.0%
!!! ATTTAAGTTCCTATCTTTTC+AGG + chr2_3:20634662-20634681 Msa0283450:intron 25.0%
! TTATCGAACATGTTAATAAC+AGG - chr2_3:20635273-20635292 None:intergenic 25.0%
!! ACAGTAATTTTTGCAATCTT+CGG - chr2_3:20635640-20635659 None:intergenic 25.0%
!! CATTTCAATGTTTTATCTTC+AGG + chr2_3:20636466-20636485 Msa0283450:intron 25.0%
! TAATGAAACTATTGCAAGAA+AGG + chr2_3:20636519-20636538 Msa0283450:CDS 25.0%
! ATAGGAACATACATAATAGA+TGG - chr2_3:20636704-20636723 None:intergenic 25.0%
! ATGGAAAATTATGATTCATG+TGG + chr2_3:20636915-20636934 Msa0283450:three_prime_UTR 25.0%
ACATACCTAGTATCAACATT+GGG + chr2_3:20630839-20630858 Msa0283450:five_prime_UTR 30.0%
GATGGATAGGAAATTGAAAT+TGG - chr2_3:20630875-20630894 None:intergenic 30.0%
!!! TTTTCGATTGAATGATGGAT+AGG - chr2_3:20630888-20630907 None:intergenic 30.0%
TATCCATCATTCAATCGAAA+AGG + chr2_3:20630887-20630906 Msa0283450:five_prime_UTR 30.0%
ATCCATCATTCAATCGAAAA+GGG + chr2_3:20630888-20630907 Msa0283450:five_prime_UTR 30.0%
!!! TCAGGTTAGTTTTGTTTCAT+TGG + chr2_3:20631029-20631048 Msa0283450:intron 30.0%
!! GTTTTGGATTTTTACTTGTG+GGG + chr2_3:20631077-20631096 Msa0283450:intron 30.0%
ATTCATCATTCATGTGCAAA+AGG - chr2_3:20631119-20631138 None:intergenic 30.0%
CAATCAATTCAAGCAAATCA+TGG - chr2_3:20631336-20631355 None:intergenic 30.0%
CTCATATTGTGATGTTTACT+TGG + chr2_3:20631360-20631379 Msa0283450:intron 30.0%
!!! TACTTGGTGATGTTACATTT+TGG + chr2_3:20631376-20631395 Msa0283450:intron 30.0%
! ATTTTACGCAGAATTGAGAA+GGG + chr2_3:20631530-20631549 Msa0283450:intron 30.0%
ACAAAGATGAGAGAGTTAAT+AGG - chr2_3:20631680-20631699 None:intergenic 30.0%
!! AGGACTTGATGATGTAATTT+CGG + chr2_3:20631833-20631852 Msa0283450:intron 30.0%
CTTACTATTATGACTGTATC+AGG + chr2_3:20632071-20632090 Msa0283450:intron 30.0%
ACTGAGAAGTTAAATAACCA+AGG + chr2_3:20632125-20632144 Msa0283450:CDS 30.0%
TTATTTGAAGAATCCTTGGT+TGG - chr2_3:20632329-20632348 None:intergenic 30.0%
AGGAATTCAACAAAGATACA+AGG + chr2_3:20632386-20632405 Msa0283450:CDS 30.0%
AATTCAACAAAGATACAAGG+AGG + chr2_3:20632389-20632408 Msa0283450:CDS 30.0%
TCTCTTAATCATGATAGGAA+AGG + chr2_3:20632419-20632438 Msa0283450:CDS 30.0%
ACATTCAAAAACGTAAGAGA+AGG + chr2_3:20632471-20632490 Msa0283450:CDS 30.0%
CTCATAAAAATAGCGATACA+GGG - chr2_3:20633028-20633047 None:intergenic 30.0%
TCTCATAAAAATAGCGATAC+AGG - chr2_3:20633029-20633048 None:intergenic 30.0%
AATTTGCACAGAATATCTAG+AGG - chr2_3:20633091-20633110 None:intergenic 30.0%
GTTCAATCTTTAATGTGACA+CGG + chr2_3:20633251-20633270 Msa0283450:intron 30.0%
CTGTAAGATAGAAATATTGG+AGG + chr2_3:20633356-20633375 Msa0283450:CDS 30.0%
TTTGGTTGTGCATGAAAAAA+GGG - chr2_3:20633648-20633667 None:intergenic 30.0%
ATTTGGTTGTGCATGAAAAA+AGG - chr2_3:20633649-20633668 None:intergenic 30.0%
! TGATTTTCACTTCCTTCTAT+TGG + chr2_3:20633820-20633839 Msa0283450:intron 30.0%
GAATGTTCTATGTTAGATGA+AGG + chr2_3:20634088-20634107 Msa0283450:CDS 30.0%
GGTCGTTAGAATAATATTCA+AGG - chr2_3:20634120-20634139 None:intergenic 30.0%
TGAAATCTTTAGCAGTCATA+CGG + chr2_3:20634271-20634290 Msa0283450:intron 30.0%
AAGTACTTGTGATACTGTTT+GGG - chr2_3:20634592-20634611 None:intergenic 30.0%
TAAGTACTTGTGATACTGTT+TGG - chr2_3:20634593-20634612 None:intergenic 30.0%
TAGGAACTTAAATGAAACCT+TGG - chr2_3:20634655-20634674 None:intergenic 30.0%
CAAACATTTCCTGAAAAGAT+AGG - chr2_3:20634674-20634693 None:intergenic 30.0%
!! CTATCTTTTCAGGAAATGTT+TGG + chr2_3:20634672-20634691 Msa0283450:intron 30.0%
!! TTTTCAGGAAATGTTTGGAA+AGG + chr2_3:20634677-20634696 Msa0283450:intron 30.0%
AGAATAAAAGGGAATTCTTC+AGG + chr2_3:20634846-20634865 Msa0283450:CDS 30.0%
!!! GCATAAAAAGACCTTGTTTT+AGG + chr2_3:20634868-20634887 Msa0283450:CDS 30.0%
TCATGTGAAAACCTAAAACA+AGG - chr2_3:20634882-20634901 None:intergenic 30.0%
GAGATGGATGCAAATTTATA+GGG - chr2_3:20635183-20635202 None:intergenic 30.0%
!! GAGTTATTTGCATTGCTTTT+TGG + chr2_3:20635207-20635226 Msa0283450:intron 30.0%
CATGTTAATAACAGGAAGTT+TGG - chr2_3:20635265-20635284 None:intergenic 30.0%
ATTAACATGTTCGATAATGC+AGG + chr2_3:20635276-20635295 Msa0283450:intron 30.0%
CAATAAACTTTGACACAAGT+GGG + chr2_3:20635511-20635530 Msa0283450:intron 30.0%
! TATCACTTCTAAGAACTCAA+AGG + chr2_3:20635573-20635592 Msa0283450:CDS 30.0%
! CAGTAATTTTTGCAATCTTC+GGG - chr2_3:20635639-20635658 None:intergenic 30.0%
GAAGATTGCAAAAATTACTG+TGG + chr2_3:20635639-20635658 Msa0283450:CDS 30.0%
! ACATTTTCACACTTCTTCAA+GGG - chr2_3:20635670-20635689 None:intergenic 30.0%
! AACATTTTCACACTTCTTCA+AGG - chr2_3:20635671-20635690 None:intergenic 30.0%
! AAGAAGTGTGAAAATGTTAC+TGG + chr2_3:20635673-20635692 Msa0283450:CDS 30.0%
!! TGTCGGTTTGACAAAAATAA+AGG + chr2_3:20636006-20636025 Msa0283450:intron 30.0%
CCACGAAAACTTAAGTTATT+AGG - chr2_3:20636433-20636452 None:intergenic 30.0%
! CCTAATAACTTAAGTTTTCG+TGG + chr2_3:20636430-20636449 Msa0283450:intron 30.0%
ATTGCAAGAAAGGAAAAAGA+AGG + chr2_3:20636529-20636548 Msa0283450:CDS 30.0%
! AAGGTAAGTTTTGCATTTGA+AGG + chr2_3:20636548-20636567 Msa0283450:CDS 30.0%
AGATTGAAGCAAAGATTAAC+TGG + chr2_3:20636632-20636651 Msa0283450:CDS 30.0%
! TTAAAACATTTTTGCACAGC+AGG + chr2_3:20636778-20636797 Msa0283450:three_prime_UTR 30.0%
! TAAAACATTTTTGCACAGCA+GGG + chr2_3:20636779-20636798 Msa0283450:three_prime_UTR 30.0%
GAAAATTATGATTCATGTGG+TGG + chr2_3:20636918-20636937 Msa0283450:three_prime_UTR 30.0%
!! CTTTAAGGTTCTTGTTGTGT+TGG - chr2_3:20630789-20630808 None:intergenic 35.0%
! TCGAAGCATCACAATCTTTA+AGG - chr2_3:20630804-20630823 None:intergenic 35.0%
CACATACCTAGTATCAACAT+TGG + chr2_3:20630838-20630857 Msa0283450:five_prime_UTR 35.0%
AGATTCCCAATGTTGATACT+AGG - chr2_3:20630847-20630866 None:intergenic 35.0%
! AACCCTTTTCGATTGAATGA+TGG - chr2_3:20630893-20630912 None:intergenic 35.0%
!! TCATTGGTGTTAAGTTCATG+TGG + chr2_3:20631045-20631064 Msa0283450:intron 35.0%
!! CATTGGTGTTAAGTTCATGT+GGG + chr2_3:20631046-20631065 Msa0283450:intron 35.0%
! GATTTTACGCAGAATTGAGA+AGG + chr2_3:20631529-20631548 Msa0283450:intron 35.0%
! TCATGCAATTTTGCCATTGT+TGG + chr2_3:20631739-20631758 Msa0283450:intron 35.0%
TGGAAAATGCTATCCAACAA+TGG - chr2_3:20631755-20631774 None:intergenic 35.0%
AAGAACAGACTTAGACTTAC+AGG + chr2_3:20631813-20631832 Msa0283450:intron 35.0%
TACAATATGTGTTTCTCCGT+TGG + chr2_3:20632026-20632045 Msa0283450:intron 35.0%
GTCAAGATGAATTCTTCCAA+CGG - chr2_3:20632045-20632064 None:intergenic 35.0%
TACAAAACCGAGTAACACAA+AGG + chr2_3:20632151-20632170 Msa0283450:CDS 35.0%
! ACATGTTCCTTTGTGTTACT+CGG - chr2_3:20632161-20632180 None:intergenic 35.0%
!! AAAGGAACATGTCAAGTTGA+AGG + chr2_3:20632169-20632188 Msa0283450:CDS 35.0%
!!! TGTGCTACTTGTTTTGAACT+GGG - chr2_3:20632204-20632223 None:intergenic 35.0%
!!! TTGTGCTACTTGTTTTGAAC+TGG - chr2_3:20632205-20632224 None:intergenic 35.0%
TCAAAATCTCATAAACTCGG+AGG + chr2_3:20632254-20632273 Msa0283450:CDS 35.0%
!! AGCTACTGATTCTTCCAATA+AGG + chr2_3:20632301-20632320 Msa0283450:CDS 35.0%
AGATATTCCTTGTTCTTCTC+TGG - chr2_3:20632550-20632569 None:intergenic 35.0%
!! AGTTCAGTTGGTAGTATTGA+AGG + chr2_3:20632933-20632952 Msa0283450:CDS 35.0%
CACATAGATTCTGATGAATC+CGG + chr2_3:20634139-20634158 Msa0283450:CDS 35.0%
ACATAGATTCTGATGAATCC+GGG + chr2_3:20634140-20634159 Msa0283450:CDS 35.0%
TAAGTGCCTATTAGCATAAG+CGG + chr2_3:20634375-20634394 Msa0283450:intron 35.0%
TGATAACCGCTTATGCTAAT+AGG - chr2_3:20634384-20634403 None:intergenic 35.0%
! AATAAGTTGAAACCGGCTTA+TGG + chr2_3:20634536-20634555 Msa0283450:intron 35.0%
! ATAAGTTGAAACCGGCTTAT+GGG + chr2_3:20634537-20634556 Msa0283450:intron 35.0%
ACTTAAATGAAACCTTGGTC+CGG - chr2_3:20634650-20634669 None:intergenic 35.0%
AAGTGAGTGAAGATGAAGAT+TGG + chr2_3:20634718-20634737 Msa0283450:CDS 35.0%
AGTGAGTGAAGATGAAGATT+GGG + chr2_3:20634719-20634738 Msa0283450:CDS 35.0%
AAAAAGACGGAGAAGAGAAA+AGG + chr2_3:20634749-20634768 Msa0283450:CDS 35.0%
! TTTTCAGTTGGAACTTTGAG+AGG - chr2_3:20634960-20634979 None:intergenic 35.0%
GCTTCTGGCAAATTTCATAA+TGG - chr2_3:20635020-20635039 None:intergenic 35.0%
AAGTCCCATTTCTTTCGAAA+GGG - chr2_3:20635094-20635113 None:intergenic 35.0%
GGAGATGGATGCAAATTTAT+AGG - chr2_3:20635184-20635203 None:intergenic 35.0%
AAGCAATGCAAATAACTCTG+CGG - chr2_3:20635205-20635224 None:intergenic 35.0%
CGATAATGCAGGTTAACAAA+TGG + chr2_3:20635287-20635306 Msa0283450:intron 35.0%
GTTCAAAAATGCACGTTACA+TGG + chr2_3:20635309-20635328 Msa0283450:CDS 35.0%
CATGGCACTTAAAATGAGAA+AGG + chr2_3:20635327-20635346 Msa0283450:CDS 35.0%
! ATGATCAGACGCCTTATTAT+AGG - chr2_3:20635454-20635473 None:intergenic 35.0%
GCAATAAACTTTGACACAAG+TGG + chr2_3:20635510-20635529 Msa0283450:intron 35.0%
!!! GGTTTTGTTTAGCTTCAAGA+AGG + chr2_3:20635532-20635551 Msa0283450:intron 35.0%
! TTTGTTTAGCTTCAAGAAGG+AGG + chr2_3:20635535-20635554 Msa0283450:intron 35.0%
AATGCACGGAATATGACATT+TGG - chr2_3:20635800-20635819 None:intergenic 35.0%
TTCTCAAGCACAAAAATGCA+CGG - chr2_3:20635814-20635833 None:intergenic 35.0%
! GTTCATGCAGTTGATATTTG+AGG + chr2_3:20635860-20635879 Msa0283450:intron 35.0%
! AATTTTACGATACCAGTCCA+TGG - chr2_3:20635933-20635952 None:intergenic 35.0%
GACTGGTATCGTAAAATTGT+TGG + chr2_3:20635935-20635954 Msa0283450:intron 35.0%
AGATGTAACATGATCTGTGT+CGG + chr2_3:20635989-20636008 Msa0283450:intron 35.0%
GACTAGATCATTGTCAAGTT+TGG - chr2_3:20636085-20636104 None:intergenic 35.0%
GACTGTAACTTCTACTTTCA+AGG + chr2_3:20636131-20636150 Msa0283450:intron 35.0%
! GTTTTATCTTCAGGATTCCA+TGG + chr2_3:20636475-20636494 Msa0283450:intron 35.0%
TGGAGTTCAAAATTGCAGAT+CGG + chr2_3:20636652-20636671 Msa0283450:CDS 35.0%
ATGTTCCTATAGCTGAGTTA+AGG + chr2_3:20636714-20636733 Msa0283450:CDS 35.0%
TGTTCCTATAGCTGAGTTAA+GGG + chr2_3:20636715-20636734 Msa0283450:CDS 35.0%
! TTTTCCCTTAACTCAGCTAT+AGG - chr2_3:20636722-20636741 None:intergenic 35.0%
TATAGCTGAGTTAAGGGAAA+AGG + chr2_3:20636721-20636740 Msa0283450:CDS 35.0%
GTACAATGAAATGAAGCAAC+CGG + chr2_3:20636836-20636855 Msa0283450:three_prime_UTR 35.0%
!!! CATGTGGGTTTGTCTTGTTT+TGG + chr2_3:20631061-20631080 Msa0283450:intron 40.0%
TGTGGGGCTTAATAAAGTCA+AGG + chr2_3:20631093-20631112 Msa0283450:intron 40.0%
AATCTCGATTGTAACCACCT+TGG - chr2_3:20631513-20631532 None:intergenic 40.0%
!! TACTCGGTTTTGTAGATCCT+TGG - chr2_3:20632145-20632164 None:intergenic 40.0%
!!! TGCTACTTGTTTTGAACTGG+GGG - chr2_3:20632202-20632221 None:intergenic 40.0%
!!! GTGCTACTTGTTTTGAACTG+GGG - chr2_3:20632203-20632222 None:intergenic 40.0%
CAAGTAGCACAAAACACCAA+AGG + chr2_3:20632213-20632232 Msa0283450:CDS 40.0%
TCAGTCTGTCTTTCTTCCTT+TGG - chr2_3:20632232-20632251 None:intergenic 40.0%
AGGAAAGGTGAGATAGATGT+TGG + chr2_3:20632434-20632453 Msa0283450:CDS 40.0%
!! GATAGATGTTGGTGATCAAG+AGG + chr2_3:20632445-20632464 Msa0283450:CDS 40.0%
TATTCCTTGTTCTTCTCTGG+AGG - chr2_3:20632547-20632566 None:intergenic 40.0%
GAAATGCGCATCTCATTCTA+TGG - chr2_3:20632715-20632734 None:intergenic 40.0%
AGAGAAGATTAGGCCAGAAA+AGG + chr2_3:20632833-20632852 Msa0283450:CDS 40.0%
!! AAGAGAATCCAGTTGGTGAA+TGG - chr2_3:20632913-20632932 None:intergenic 40.0%
CTGAACTAAGAGAATCCAGT+TGG - chr2_3:20632920-20632939 None:intergenic 40.0%
CTGGATTCTCTTAGTTCAGT+TGG + chr2_3:20632921-20632940 Msa0283450:CDS 40.0%
GCACAGAATATCTAGAGGAT+GGG - chr2_3:20633086-20633105 None:intergenic 40.0%
TGCACAGAATATCTAGAGGA+TGG - chr2_3:20633087-20633106 None:intergenic 40.0%
AATACTTGCAAAACCAGCCT+TGG - chr2_3:20633332-20633351 None:intergenic 40.0%
ATTTCCCCTTAGACAGTACT+TGG + chr2_3:20633403-20633422 Msa0283450:CDS 40.0%
GATATACACTGACAGTGTAG+AGG - chr2_3:20633751-20633770 None:intergenic 40.0%
CTTGGTTGTGTAAGAGACAA+GGG - chr2_3:20633795-20633814 None:intergenic 40.0%
ACTTGGTTGTGTAAGAGACA+AGG - chr2_3:20633796-20633815 None:intergenic 40.0%
GGATTATAGTCATCGTCTTC+AGG - chr2_3:20633965-20633984 None:intergenic 40.0%
ACGATGACTATAATCCAGAG+AGG + chr2_3:20633969-20633988 Msa0283450:CDS 40.0%
TGACTATAATCCAGAGAGGA+AGG + chr2_3:20633973-20633992 Msa0283450:CDS 40.0%
TCCAGCATGTGGTCTTTAAA+TGG + chr2_3:20634064-20634083 Msa0283450:CDS 40.0%
TCCATTTAAAGACCACATGC+TGG - chr2_3:20634068-20634087 None:intergenic 40.0%
CGGATTCATCAGAATCTATG+TGG - chr2_3:20634141-20634160 None:intergenic 40.0%
CATAGATTCTGATGAATCCG+GGG + chr2_3:20634141-20634160 Msa0283450:CDS 40.0%
TTATGACATGTCCCATAAGC+CGG - chr2_3:20634551-20634570 None:intergenic 40.0%
GTGAGTGAAGATGAAGATTG+GGG + chr2_3:20634720-20634739 Msa0283450:CDS 40.0%
! GTTTTCACATGATGCAGTTG+AGG + chr2_3:20634890-20634909 Msa0283450:CDS 40.0%
GCTCATTCTCTGCAAAAACT+TGG - chr2_3:20635047-20635066 None:intergenic 40.0%
CAAGTCCCATTTCTTTCGAA+AGG - chr2_3:20635095-20635114 None:intergenic 40.0%
! AAATCTGACTCGAGACTCTA+AGG - chr2_3:20635135-20635154 None:intergenic 40.0%
TTCTACATCACAACATGTGC+AGG + chr2_3:20635597-20635616 Msa0283450:CDS 40.0%
!!! TCTGGTCGCTTTTTCTTCAA+AGG - chr2_3:20635727-20635746 None:intergenic 40.0%
! CATGCAGTTGATATTTGAGG+TGG + chr2_3:20635863-20635882 Msa0283450:intron 40.0%
ATGGTAAACCACCTATCAAG+GGG - chr2_3:20635914-20635933 None:intergenic 40.0%
CATGGTAAACCACCTATCAA+GGG - chr2_3:20635915-20635934 None:intergenic 40.0%
TCTCAGACGTTACAGCAAAA+AGG + chr2_3:20636109-20636128 Msa0283450:intron 40.0%
AACAATTTAGTCCACCTCTC+AGG - chr2_3:20636220-20636239 None:intergenic 40.0%
CCGAAAGGCTAAACTATTAG+GGG - chr2_3:20636280-20636299 None:intergenic 40.0%
! CCCCTAATAGTTTAGCCTTT+CGG + chr2_3:20636277-20636296 Msa0283450:intron 40.0%
CCCGAAAGGCTAAACTATTA+GGG - chr2_3:20636281-20636300 None:intergenic 40.0%
! CCCTAATAGTTTAGCCTTTC+GGG + chr2_3:20636278-20636297 Msa0283450:intron 40.0%
TCCCGAAAGGCTAAACTATT+AGG - chr2_3:20636282-20636301 None:intergenic 40.0%
TTATCTTCAGGATTCCATGG+AGG + chr2_3:20636478-20636497 Msa0283450:intron 40.0%
GGAGTTCAAAATTGCAGATC+GGG + chr2_3:20636653-20636672 Msa0283450:CDS 40.0%
!!! GCTACTTGTTTTGAACTGGG+GGG - chr2_3:20632201-20632220 None:intergenic 45.0%
! TTCCAATAAGGTGCCAACCA+AGG + chr2_3:20632313-20632332 Msa0283450:CDS 45.0%
ATCCTTGGTTGGCACCTTAT+TGG - chr2_3:20632318-20632337 None:intergenic 45.0%
AACCTTATCGATGCTTACGC+TGG + chr2_3:20632593-20632612 Msa0283450:CDS 45.0%
! TTGGAAAGGTCAGAGGTATG+AGG + chr2_3:20632622-20632641 Msa0283450:intron 45.0%
GTCACAGTCGAGAGAAGATT+AGG + chr2_3:20632823-20632842 Msa0283450:intron 45.0%
GGTTCTGTCATTGCTACAGA+TGG + chr2_3:20632954-20632973 Msa0283450:CDS 45.0%
AAGGAGGATCAAGACATCTC+TGG - chr2_3:20633184-20633203 None:intergenic 45.0%
GAGATGTCTTGATCCTCCTT+TGG + chr2_3:20633184-20633203 Msa0283450:CDS 45.0%
TCACTGTCTTCAGTCTCCAA+AGG - chr2_3:20633203-20633222 None:intergenic 45.0%
! ACCTGCCAAGTACTGTCTAA+GGG - chr2_3:20633411-20633430 None:intergenic 45.0%
! AACCTGCCAAGTACTGTCTA+AGG - chr2_3:20633412-20633431 None:intergenic 45.0%
GAAGAAGCTGCTATTCCTGA+CGG + chr2_3:20633893-20633912 Msa0283450:CDS 45.0%
TCGTCTTCAGGATCATCTGA+CGG - chr2_3:20633953-20633972 None:intergenic 45.0%
CAAGTAGTTCTTCCAGCATG+TGG + chr2_3:20634053-20634072 Msa0283450:CDS 45.0%
AGTTAATCCAAACCGGACCA+AGG + chr2_3:20634635-20634654 Msa0283450:intron 45.0%
AATGAAACCTTGGTCCGGTT+TGG - chr2_3:20634645-20634664 None:intergenic 45.0%
ATTGGGGTCCTGGAAAAAGA+CGG + chr2_3:20634736-20634755 Msa0283450:CDS 45.0%
! TCTCTTCTCCGTCTTTTTCC+AGG - chr2_3:20634747-20634766 None:intergenic 45.0%
GAGAAGAGAAAAGGAGTCTG+AGG + chr2_3:20634758-20634777 Msa0283450:CDS 45.0%
CAAAAACTTGGCGAAGCTTC+TGG - chr2_3:20635035-20635054 None:intergenic 45.0%
GACGCCCTTTCGAAAGAAAT+GGG + chr2_3:20635087-20635106 Msa0283450:CDS 45.0%
AATGGGACTTGATGCTGCAA+AGG + chr2_3:20635104-20635123 Msa0283450:CDS 45.0%
TGCAAATAACTCTGCGGAGA+TGG - chr2_3:20635199-20635218 None:intergenic 45.0%
ACAACATGTGCAGGAAGAAG+AGG + chr2_3:20635606-20635625 Msa0283450:CDS 45.0%
ACCAGAAATACCTCCACACT+TGG + chr2_3:20635741-20635760 Msa0283450:CDS 45.0%
CCAGAAATACCTCCACACTT+GGG + chr2_3:20635742-20635761 Msa0283450:CDS 45.0%
!!! TTGCCATTTTCTCCCAAGTG+TGG - chr2_3:20635757-20635776 None:intergenic 45.0%
CTTGGGAGAAAATGGCAACA+AGG + chr2_3:20635759-20635778 Msa0283450:CDS 45.0%
TGGTAAACCACCTATCAAGG+GGG - chr2_3:20635913-20635932 None:intergenic 45.0%
CCATGGTAAACCACCTATCA+AGG - chr2_3:20635916-20635935 None:intergenic 45.0%
CCTTGATAGGTGGTTTACCA+TGG + chr2_3:20635913-20635932 Msa0283450:intron 45.0%
ATAGGTGGTTTACCATGGAC+TGG + chr2_3:20635918-20635937 Msa0283450:intron 45.0%
TCTCAGCAGTGAAGAAAACG+AGG - chr2_3:20635972-20635991 None:intergenic 45.0%
ATGTCACGAATCATCCCGAA+AGG - chr2_3:20636295-20636314 None:intergenic 45.0%
TTTCGGGATGATTCGTGACA+TGG + chr2_3:20636294-20636313 Msa0283450:intron 45.0%
AACATCATCACTGACCTCCA+TGG - chr2_3:20636495-20636514 None:intergenic 45.0%
AAATTCCAACTCTGCTGCCT+CGG - chr2_3:20636579-20636598 None:intergenic 45.0%
CACGTGACTCAGAACACGTA+CGG - chr2_3:20631278-20631297 None:intergenic 50.0%
CGGAGGTTGCACAAATGTGT+CGG + chr2_3:20632271-20632290 Msa0283450:CDS 50.0%
TACGCCTCCAGAGAAGAACA+AGG + chr2_3:20632540-20632559 Msa0283450:CDS 50.0%
!! CTCCAGCGTAAGCATCGATA+AGG - chr2_3:20632598-20632617 None:intergenic 50.0%
ATCGATGCTTACGCTGGAGA+AGG + chr2_3:20632599-20632618 Msa0283450:CDS 50.0%
ATGCTTACGCTGGAGAAGGT+TGG + chr2_3:20632603-20632622 Msa0283450:CDS 50.0%
TACGCTGGAGAAGGTTGGAA+AGG + chr2_3:20632608-20632627 Msa0283450:CDS 50.0%
GAGAAGGTTGGAAAGGTCAG+AGG + chr2_3:20632615-20632634 Msa0283450:CDS 50.0%
!! CCAGTTGGTGAATGGCATCA+CGG - chr2_3:20632905-20632924 None:intergenic 50.0%
CTGTCTTCAGTCTCCAAAGG+AGG - chr2_3:20633200-20633219 None:intergenic 50.0%
! CAAAACCAGCCTTGGTCTTC+AGG - chr2_3:20633324-20633343 None:intergenic 50.0%
AGGCAACAAACGCGCATCTT+GGG + chr2_3:20633376-20633395 Msa0283450:CDS 50.0%
! CCTGCCAAGTACTGTCTAAG+GGG - chr2_3:20633410-20633429 None:intergenic 50.0%
TGGCTTTCTTCCTTCCTCTC+TGG - chr2_3:20633986-20634005 None:intergenic 50.0%
GAGAGGAAGGAAGAAAGCCA+TGG + chr2_3:20633986-20634005 Msa0283450:CDS 50.0%
AGGAAGGAAGAAAGCCATGG+TGG + chr2_3:20633989-20634008 Msa0283450:CDS 50.0%
! CTTCTGTGTTGATGCCACCA+TGG - chr2_3:20634006-20634025 None:intergenic 50.0%
CATGGTGGCATCAACACAGA+AGG + chr2_3:20634004-20634023 Msa0283450:CDS 50.0%
GAATCCGGGGAAATAGCATG+TGG + chr2_3:20634154-20634173 Msa0283450:CDS 50.0%
!! ACGACCACATGCTATTTCCC+CGG - chr2_3:20634161-20634180 None:intergenic 50.0%
GGGAAATAGCATGTGGTCGT+AGG + chr2_3:20634161-20634180 Msa0283450:CDS 50.0%
GAAGATGAAGATTGGGGTCC+TGG + chr2_3:20634726-20634745 Msa0283450:CDS 50.0%
GCTTCCTCCAAAATCCGTGA+AGG + chr2_3:20635065-20635084 Msa0283450:CDS 50.0%
!! TTTCGAAAGGGCGTCCTTCA+CGG - chr2_3:20635082-20635101 None:intergenic 50.0%
GGACGCCCTTTCGAAAGAAA+TGG + chr2_3:20635086-20635105 Msa0283450:CDS 50.0%
!! CCCAAGTGTGGAGGTATTTC+TGG - chr2_3:20635745-20635764 None:intergenic 50.0%
! CCATTTTCTCCCAAGTGTGG+AGG - chr2_3:20635754-20635773 None:intergenic 50.0%
CCTCCACACTTGGGAGAAAA+TGG + chr2_3:20635751-20635770 Msa0283450:CDS 50.0%
AGAAGATCTACCGTGGAGTG+TGG + chr2_3:20635886-20635905 Msa0283450:intron 50.0%
CTCTCAGGCAAGTTCTACAG+TGG - chr2_3:20636205-20636224 None:intergenic 50.0%
CACTGTAGAACTTGCCTGAG+AGG + chr2_3:20636203-20636222 Msa0283450:intron 50.0%
TGTAGAACTTGCCTGAGAGG+TGG + chr2_3:20636206-20636225 Msa0283450:intron 50.0%
TGCATTTGAAGGAGACTCCG+AGG + chr2_3:20636559-20636578 Msa0283450:CDS 50.0%
GTCATCGTCACTCATCGCCA+AGG + chr2_3:20631493-20631512 Msa0283450:intron 55.0%
ATCGTCACTCATCGCCAAGG+TGG + chr2_3:20631496-20631515 Msa0283450:intron 55.0%
! GCTCGTTGCAGCTCCTTTTC+TGG - chr2_3:20632849-20632868 None:intergenic 55.0%
CCGTGATGCCATTCACCAAC+TGG + chr2_3:20632902-20632921 Msa0283450:CDS 55.0%
GCAGTTCCTCCTGAAGACCA+AGG + chr2_3:20633312-20633331 Msa0283450:intron 55.0%
TTCCTCCTGAAGACCAAGGC+TGG + chr2_3:20633316-20633335 Msa0283450:CDS 55.0%
! AACCAGCCTTGGTCTTCAGG+AGG - chr2_3:20633321-20633340 None:intergenic 55.0%
GAGGCAACAAACGCGCATCT+TGG + chr2_3:20633375-20633394 Msa0283450:CDS 55.0%
CCCCTTAGACAGTACTTGGC+AGG + chr2_3:20633407-20633426 Msa0283450:CDS 55.0%
AGTAATGCAGCATCGCCGTC+AGG - chr2_3:20633911-20633930 None:intergenic 55.0%
! GCGTCCTTCACGGATTTTGG+AGG - chr2_3:20635072-20635091 None:intergenic 55.0%
!! AGGGCGTCCTTCACGGATTT+TGG - chr2_3:20635075-20635094 None:intergenic 55.0%
GAGGTGGAGAAGATCTACCG+TGG + chr2_3:20635879-20635898 Msa0283450:intron 55.0%
TCAAGGGGGTCCACACTCCA+CGG - chr2_3:20635899-20635918 None:intergenic 60.0%
GGAGTGTGGACCCCCTTGAT+AGG + chr2_3:20635900-20635919 Msa0283450:intron 60.0%
GTGTGGACCCCCTTGATAGG+TGG + chr2_3:20635903-20635922 Msa0283450:intron 60.0%
AGACTCCGAGGCAGCAGAGT+TGG + chr2_3:20636571-20636590 Msa0283450:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 20630718 20636945 20630718 ID=Msa0283450;Name=Msa0283450
chr2_3 mRNA 20630718 20636945 20630718 ID=Msa0283450-mRNA-1;Parent=Msa0283450;Name=Msa0283450-mRNA-1;_AED=0.06;_eAED=0.06;_QI=338|1|1|1|0.9|0.81|11|194|710
chr2_3 exon 20630718 20631032 20630718 ID=Msa0283450-mRNA-1:exon:8137;Parent=Msa0283450-mRNA-1
chr2_3 exon 20632093 20632636 20632093 ID=Msa0283450-mRNA-1:exon:8138;Parent=Msa0283450-mRNA-1
chr2_3 exon 20632830 20632995 20632830 ID=Msa0283450-mRNA-1:exon:8139;Parent=Msa0283450-mRNA-1
chr2_3 exon 20633095 20633218 20633095 ID=Msa0283450-mRNA-1:exon:8140;Parent=Msa0283450-mRNA-1
chr2_3 exon 20633316 20633428 20633316 ID=Msa0283450-mRNA-1:exon:8141;Parent=Msa0283450-mRNA-1
chr2_3 exon 20633881 20634219 20633881 ID=Msa0283450-mRNA-1:exon:8142;Parent=Msa0283450-mRNA-1
chr2_3 exon 20634684 20634911 20634684 ID=Msa0283450-mRNA-1:exon:8143;Parent=Msa0283450-mRNA-1
chr2_3 exon 20635036 20635125 20635036 ID=Msa0283450-mRNA-1:exon:8144;Parent=Msa0283450-mRNA-1
chr2_3 exon 20635298 20635348 20635298 ID=Msa0283450-mRNA-1:exon:8145;Parent=Msa0283450-mRNA-1
chr2_3 exon 20635544 20635780 20635544 ID=Msa0283450-mRNA-1:exon:8146;Parent=Msa0283450-mRNA-1
chr2_3 exon 20636488 20636945 20636488 ID=Msa0283450-mRNA-1:exon:8147;Parent=Msa0283450-mRNA-1
chr2_3 five_prime_UTR 20630718 20631032 20630718 ID=Msa0283450-mRNA-1:five_prime_utr;Parent=Msa0283450-mRNA-1
chr2_3 five_prime_UTR 20632093 20632115 20632093 ID=Msa0283450-mRNA-1:five_prime_utr;Parent=Msa0283450-mRNA-1
chr2_3 CDS 20632116 20632636 20632116 ID=Msa0283450-mRNA-1:cds;Parent=Msa0283450-mRNA-1
chr2_3 CDS 20632830 20632995 20632830 ID=Msa0283450-mRNA-1:cds;Parent=Msa0283450-mRNA-1
chr2_3 CDS 20633095 20633218 20633095 ID=Msa0283450-mRNA-1:cds;Parent=Msa0283450-mRNA-1
chr2_3 CDS 20633316 20633428 20633316 ID=Msa0283450-mRNA-1:cds;Parent=Msa0283450-mRNA-1
chr2_3 CDS 20633881 20634219 20633881 ID=Msa0283450-mRNA-1:cds;Parent=Msa0283450-mRNA-1
chr2_3 CDS 20634684 20634911 20634684 ID=Msa0283450-mRNA-1:cds;Parent=Msa0283450-mRNA-1
chr2_3 CDS 20635036 20635125 20635036 ID=Msa0283450-mRNA-1:cds;Parent=Msa0283450-mRNA-1
chr2_3 CDS 20635298 20635348 20635298 ID=Msa0283450-mRNA-1:cds;Parent=Msa0283450-mRNA-1
chr2_3 CDS 20635544 20635780 20635544 ID=Msa0283450-mRNA-1:cds;Parent=Msa0283450-mRNA-1
chr2_3 CDS 20636488 20636751 20636488 ID=Msa0283450-mRNA-1:cds;Parent=Msa0283450-mRNA-1
chr2_3 three_prime_UTR 20636752 20636945 20636752 ID=Msa0283450-mRNA-1:three_prime_utr;Parent=Msa0283450-mRNA-1
Gene Sequence

>Msa0283450

ATGCGGGATACTGAGAAGTTAAATAACCAAGGATCTACAAAACCGAGTAACACAAAGGAACATGTCAAGTTGAAGGTAGATTCCCCCCAGTTCAAAACAAGTAGCACAAAACACCAAAGGAAGAAAGACAGACTGAAATCAAAATCTCATAAACTCGGAGGTTGCACAAATGTGTCGGTGAAGACAGCTACTGATTCTTCCAATAAGGTGCCAACCAAGGATTCTTCAAATAAAAGATTGATTGTTGAACAAAGTCTACATAAAACTGATAGGAATTCAACAAAGATACAAGGAGGAAAAACTTCTCTTAATCATGATAGGAAAGGTGAGATAGATGTTGGTGATCAAGAGGAAAACATTCAAAAACGTAAGAGAAGGAGAAAGAAGAAAAGACAGAAACATGATGTAGATCTTGATGATACTGTACGCCTCCAGAGAAGAACAAGGAATATCTTAATCAGAATGAAGCAAGAGCAGAACCTTATCGATGCTTACGCTGGAGAAGGTTGGAAAGGTCAGAGTCGAGAGAAGATTAGGCCAGAAAAGGAGCTGCAACGAGCAAAAAAGCAGATTTTAAAATGCAAGCTTAGTATCCGTGATGCCATTCACCAACTGGATTCTCTTAGTTCAGTTGGTAGTATTGAAGGTTCTGTCATTGCTACAGATGGATCTGTTTCTCATGAACATATATTCTGTGCAAATTGCAAGATAAACGAAGTTTCTCCAGATAATGATATTATACTCTGTGATGGCACATGCAATCGTGCGTTTCACCAGAGATGTCTTGATCCTCCTTTGGAGACTGAAGACATTCCTCCTGAAGACCAAGGCTGGTTTTGCAAGTATTGTGACTGTAAGATAGAAATATTGGAGGCAACAAACGCGCATCTTGGGACTCATTTCCCCTTAGACAGTACTTGGCAGGATGTATTCAAGGAAGAAGCTGCTATTCCTGACGGCGATGCTGCATTACTAAATCAAGAAGAAGAATGGCCGTCAGATGATCCTGAAGACGATGACTATAATCCAGAGAGGAAGGAAGAAAGCCATGGTGGCATCAACACAGAAGGAAATGATGAAAACGCATCTGATGATTCAAGTAGTTCTTCCAGCATGTGGTCTTTAAATGGAGAATGTTCTATGTTAGATGAAGGCATCAACCTTGAATATTATTCTAACGACCACATAGATTCTGATGAATCCGGGGAAATAGCATGTGGTCGTAGGCAGCGTAGAGCTGTTGACTACAAGAAGCTTTATGATGAAATGTTTGGAAAGGATGCTCCACCTTGTGAACAAGTGAGTGAAGATGAAGATTGGGGTCCTGGAAAAAGACGGAGAAGAGAAAAGGAGTCTGAGGCAGTTAATACTCTTATGACTTTACATGAGAGTGAAAATAAATATCCGAATAATAAGAACAATGATAGAATAAAAGGGAATTCTTCAGGCATAAAAAGACCTTGTTTTAGGTTTTCACATGATGCAGTTGAGAAGCTTCGCCAAGTTTTTGCAGAGAATGAGCTTCCTCCAAAATCCGTGAAGGACGCCCTTTCGAAAGAAATGGGACTTGATGCTGCAAAGGTTAACAAATGGTTCAAAAATGCACGTTACATGGCACTTAAAATGAGAAAGCTTCAAGAAGGAGGACAACAGCTTCAGAGTATCACTTCTAAGAACTCAAAGGATTCTACATCACAACATGTGCAGGAAGAAGAGGTTTTGAACCCGAAGATTGCAAAAATTACTGTGGTTCGTCCCTTGAAGAAGTGTGAAAATGTTACTGGCAAAGAAAAAACAAAAGCATCTAGCAGTCCTTTGAAGAAAAAGCGACCAGAAATACCTCCACACTTGGGAGAAAATGGCAACAAGGATTCCATGGAGGTCAGTGATGATGTTAGCTTAATGAAACTATTGCAAGAAAGGAAAAAGAAGGTAAGTTTTGCATTTGAAGGAGACTCCGAGGCAGCAGAGTTGGAATTTGAAAGACTCAGCAAAGTGAAGACGAAAATAGATAGATTGAAGCAAAGATTAACTGGAGTTCAAAATTGCAGATCGGGTTCAGATGAAGTTCATTTGAATGAGCCATCTATTATGTATGTTCCTATAGCTGAGTTAAGGGAAAAGGTGAAATAG

Protein sequence

>Msa0283450

MRDTEKLNNQGSTKPSNTKEHVKLKVDSPQFKTSSTKHQRKKDRLKSKSHKLGGCTNVSVKTATDSSNKVPTKDSSNKRLIVEQSLHKTDRNSTKIQGGKTSLNHDRKGEIDVGDQEENIQKRKRRRKKKRQKHDVDLDDTVRLQRRTRNILIRMKQEQNLIDAYAGEGWKGQSREKIRPEKELQRAKKQILKCKLSIRDAIHQLDSLSSVGSIEGSVIATDGSVSHEHIFCANCKINEVSPDNDIILCDGTCNRAFHQRCLDPPLETEDIPPEDQGWFCKYCDCKIEILEATNAHLGTHFPLDSTWQDVFKEEAAIPDGDAALLNQEEEWPSDDPEDDDYNPERKEESHGGINTEGNDENASDDSSSSSSMWSLNGECSMLDEGINLEYYSNDHIDSDESGEIACGRRQRRAVDYKKLYDEMFGKDAPPCEQVSEDEDWGPGKRRRREKESEAVNTLMTLHESENKYPNNKNNDRIKGNSSGIKRPCFRFSHDAVEKLRQVFAENELPPKSVKDALSKEMGLDAAKVNKWFKNARYMALKMRKLQEGGQQLQSITSKNSKDSTSQHVQEEEVLNPKIAKITVVRPLKKCENVTGKEKTKASSSPLKKKRPEIPPHLGENGNKDSMEVSDDVSLMKLLQERKKKVSFAFEGDSEAAELEFERLSKVKTKIDRLKQRLTGVQNCRSGSDEVHLNEPSIMYVPIAELREKVK*