Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1181210 | sp|Q969N2|PIGT_HUMAN | 33.841 | 591 | 304 | 18 | 81 | 647 | 28 | 555 | 1.43e-82 | 276 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1181210 | A0A396GBW5 | 93.062 | 663 | 41 | 3 | 53 | 712 | 1 | 661 | 0.0 | 1223 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0136090 | Msa1181210 | 0.800208 | 1.605440e-48 | -8.615850e-47 |
Msa0183990 | Msa1181210 | 0.804960 | 1.680399e-49 | -8.615850e-47 |
Msa1026650 | Msa1181210 | 0.814899 | 1.217970e-51 | -8.615850e-47 |
Msa0291320 | Msa1181210 | 0.814073 | 1.855135e-51 | -8.615850e-47 |
Msa0357530 | Msa1181210 | 0.801551 | 8.535056e-49 | -8.615850e-47 |
Msa1181210 | Msa1273320 | 0.804192 | 2.431162e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1181210 | MtrunA17_Chr8g0339971 | 93.062 | 663 | 41 | 3 | 53 | 712 | 1 | 661 | 0.0 | 1223 |
Msa1181210 | MtrunA17_Chr8g0339991 | 83.860 | 601 | 82 | 1 | 53 | 653 | 1 | 586 | 0.0 | 1014 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1181210 | AT3G07140.1 | 62.124 | 631 | 219 | 6 | 81 | 710 | 29 | 640 | 0.0 | 783 |
Msa1181210 | AT3G07140.2 | 62.559 | 633 | 212 | 7 | 81 | 710 | 29 | 639 | 0.0 | 781 |
Find 147 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTGGCCAACATATATAATT+TGG | 0.098893 | 8_1:+15526295 | None:intergenic |
ACACTTCTCTTCAACATTAT+TGG | 0.141474 | 8_1:+15523801 | None:intergenic |
CTCCAGGAGGCTTTGCATTT+TGG | 0.152387 | 8_1:+15524712 | None:intergenic |
CACATCAGGTTGATGCTTCT+TGG | 0.204467 | 8_1:-15524659 | Msa1181210:CDS |
GCTCTTATTCTGCTCCTAAA+TGG | 0.218562 | 8_1:-15524572 | Msa1181210:CDS |
AGCTGGACTTTCAGCCTTAA+TGG | 0.236299 | 8_1:-15524442 | Msa1181210:CDS |
AATTGTGCCTTGGTATATTA+AGG | 0.245068 | 8_1:-15523755 | Msa1181210:CDS |
CATATGCAGCAGTATTCTTT+TGG | 0.251853 | 8_1:+15524124 | None:intergenic |
AATGGGTTCTAAACAAGTTT+TGG | 0.299059 | 8_1:-15520862 | Msa1181210:three_prime_UTR |
TGGATAGACCATCTATTTAC+AGG | 0.306661 | 8_1:-15524422 | Msa1181210:CDS |
GCCAATGTTGTCTAGATTAC+AGG | 0.307072 | 8_1:-15521964 | Msa1181210:intron |
TGGTCTTTGAGCTCAATATT+TGG | 0.318281 | 8_1:-15524237 | Msa1181210:CDS |
GCTGACTGAGATGCCCATTT+AGG | 0.323816 | 8_1:+15524558 | None:intergenic |
ACCAGCTGAGAAATGGATTT+GGG | 0.333090 | 8_1:+15525921 | None:intergenic |
AATCAATGGTAGGTGTGTTT+TGG | 0.341691 | 8_1:-15524208 | Msa1181210:CDS |
CCTGCAGATGGGTTAGATTC+AGG | 0.347012 | 8_1:-15524354 | Msa1181210:CDS |
AATTTAACCCATTCTCTATC+AGG | 0.347377 | 8_1:-15524633 | Msa1181210:CDS |
AATAGATGGTCTATCCATTA+AGG | 0.350489 | 8_1:+15524428 | None:intergenic |
ATACCCACCAGATGCTAATC+AGG | 0.352369 | 8_1:-15522069 | Msa1181210:CDS |
CATGGAAGTATCCAGTTGTT+TGG | 0.361469 | 8_1:-15523939 | Msa1181210:CDS |
CTTTGATGTCCCTCCACATC+AGG | 0.367222 | 8_1:-15524673 | Msa1181210:CDS |
TTGGCCAACATATATAATTT+GGG | 0.372535 | 8_1:+15526296 | None:intergenic |
GGTCAATTCTGTAGATTTCA+AGG | 0.377594 | 8_1:+15523840 | None:intergenic |
CACCAGCTGAGAAATGGATT+TGG | 0.379188 | 8_1:+15525920 | None:intergenic |
TTCATCAACTAATAATTGTA+AGG | 0.388494 | 8_1:+15523720 | None:intergenic |
TTGCCACACAACAGCAATTC+CGG | 0.391084 | 8_1:+15521058 | None:intergenic |
CGTTGCTTGCTTGCTAACTT+TGG | 0.396458 | 8_1:+15526151 | None:intergenic |
TGGCGGAACTTCTGTAGCTT+TGG | 0.398643 | 8_1:-15526206 | Msa1181210:CDS |
CCTCCTCTCCAACTCGTCTT+CGG | 0.402744 | 8_1:+15521718 | None:intergenic |
TAACACGTGTAACCAACAAA+TGG | 0.404922 | 8_1:-15520880 | Msa1181210:three_prime_UTR |
GAGAACTTTGCGATCGGGTA+AGG | 0.407421 | 8_1:+15526013 | None:intergenic |
CCCCAAATCCATTTCTCAGC+TGG | 0.408253 | 8_1:-15525922 | Msa1181210:intron |
ATACCAGCTTTCTGAAAATC+AGG | 0.412645 | 8_1:+15524294 | None:intergenic |
GCCTTAGGTAGTTTAAGATA+TGG | 0.428821 | 8_1:-15524537 | Msa1181210:CDS |
CTAGACCTCTCTCCACTTGA+AGG | 0.430577 | 8_1:+15524166 | None:intergenic |
CTTGTTTAGAACCCATTTGT+TGG | 0.432029 | 8_1:+15520868 | None:intergenic |
CAGCAATAGGAGCTTCGGTT+TGG | 0.432898 | 8_1:+15525976 | None:intergenic |
CTCTTATTCTGCTCCTAAAT+GGG | 0.435892 | 8_1:-15524571 | Msa1181210:CDS |
GTCACTGTGCGAGCGAGCTT+CGG | 0.436544 | 8_1:+15526238 | None:intergenic |
ACTTCTGTGTAAGAGAGAAC+AGG | 0.439686 | 8_1:+15521846 | None:intergenic |
GAAGACGATGATAGAATCAT+TGG | 0.440287 | 8_1:+15526083 | None:intergenic |
CAGGAACTCTGGATGCTGTC+AGG | 0.440783 | 8_1:+15524373 | None:intergenic |
GAAATTAATGCAAGTACAAT+GGG | 0.442761 | 8_1:+15520940 | None:intergenic |
TACAACTAACACTACAAAGT+TGG | 0.444422 | 8_1:+15521014 | None:intergenic |
AAGACACACCAGCTGAGAAA+TGG | 0.447027 | 8_1:+15525914 | None:intergenic |
TGTGAGGAGGACCAAACAAC+TGG | 0.456188 | 8_1:+15523928 | None:intergenic |
AACACGTGTAACCAACAAAT+GGG | 0.458583 | 8_1:-15520879 | Msa1181210:three_prime_UTR |
GGAAAGCTTATTATTGCTGA+TGG | 0.462385 | 8_1:+15522035 | None:intergenic |
GCGAAGGAATGATCAGCAAT+AGG | 0.464335 | 8_1:+15525963 | None:intergenic |
TAACCCATCTGCAGGAACTC+TGG | 0.466017 | 8_1:+15524362 | None:intergenic |
AATGATTCTATCATCGTCTT+CGG | 0.467915 | 8_1:-15526081 | Msa1181210:CDS |
TGCAAACCAGCATGAAAGTC+AGG | 0.468927 | 8_1:+15522014 | None:intergenic |
GAAATTTCACGTTAAAGCAA+TGG | 0.469817 | 8_1:-15524799 | Msa1181210:CDS |
TCTAAATATAGAGTTTGATA+AGG | 0.472380 | 8_1:-15523578 | Msa1181210:intron |
AGAAGAGACCTGATAGAGAA+TGG | 0.474703 | 8_1:+15524625 | None:intergenic |
GTCGATGGAACTATGAAAGA+TGG | 0.474999 | 8_1:-15524758 | Msa1181210:CDS |
ATGATCAGCAATAGGAGCTT+CGG | 0.480173 | 8_1:+15525971 | None:intergenic |
AGCCAAAATGCAAAGCCTCC+TGG | 0.482782 | 8_1:-15524714 | Msa1181210:CDS |
AAGTATCTAATACGCCAGAC+AGG | 0.484756 | 8_1:-15524053 | Msa1181210:CDS |
TTGTAAGGCATACTGAAATC+AGG | 0.485942 | 8_1:+15521801 | None:intergenic |
TGCGCGAGAACTTTGCGATC+GGG | 0.486282 | 8_1:+15526008 | None:intergenic |
AATAAGAGCTAGAGGACTCT+AGG | 0.491775 | 8_1:+15524586 | None:intergenic |
AGACAGGGTTCATAGAGAAC+TGG | 0.493028 | 8_1:-15524037 | Msa1181210:CDS |
TGGGCATCTCAGTCAGCCTT+AGG | 0.494821 | 8_1:-15524552 | Msa1181210:CDS |
GTAATTGTGATGACGTTGTA+AGG | 0.498233 | 8_1:+15521786 | None:intergenic |
AGCTTTCCTGACTTTCATGC+TGG | 0.501238 | 8_1:-15522020 | Msa1181210:CDS |
AGTTCTCTATGAACCCTGTC+TGG | 0.503743 | 8_1:+15524039 | None:intergenic |
ATTGGCTGCTATGAAGTCCT+TGG | 0.505818 | 8_1:+15523819 | None:intergenic |
TCAAATCCCTGATTAGCATC+TGG | 0.512612 | 8_1:+15522062 | None:intergenic |
GCATCCAGAGTTCCTGCAGA+TGG | 0.518163 | 8_1:-15524366 | Msa1181210:CDS |
AGAAATTAATGCAAGTACAA+TGG | 0.518974 | 8_1:+15520939 | None:intergenic |
CAAAGTATCACCAGGAGTGA+TGG | 0.519873 | 8_1:-15523641 | Msa1181210:CDS |
CTGTGGTTCTTGTGGTTGAG+TGG | 0.525282 | 8_1:+15521136 | None:intergenic |
CCTGAATCTAACCCATCTGC+AGG | 0.526279 | 8_1:+15524354 | None:intergenic |
GCCATATCTTAAACTACCTA+AGG | 0.530459 | 8_1:+15524536 | None:intergenic |
ACAAAGTCTGTGACAGCTTG+AGG | 0.532872 | 8_1:+15523694 | None:intergenic |
AATGTACTCCGAAGACGAGT+TGG | 0.532960 | 8_1:-15521726 | Msa1181210:CDS |
GAAGAGACCTGATAGAGAAT+GGG | 0.534708 | 8_1:+15524626 | None:intergenic |
AGGACCAGCTCCATCACTCC+TGG | 0.536063 | 8_1:+15523631 | None:intergenic |
TGGTTGAATCTTTATTTCAT+CGG | 0.538298 | 8_1:+15524263 | None:intergenic |
TCGATGGAACTATGAAAGAT+GGG | 0.539612 | 8_1:-15524757 | Msa1181210:CDS |
GCCTCCTGGAGTTGAACTGT+GGG | 0.543091 | 8_1:-15524700 | Msa1181210:CDS |
TTTAAAGTGCTATTGGTGGC+CGG | 0.543345 | 8_1:-15521077 | Msa1181210:CDS |
AAATAAAGATTCAACCAAGC+TGG | 0.544261 | 8_1:-15524257 | Msa1181210:CDS |
AGAACTTTGCGATCGGGTAA+GGG | 0.546258 | 8_1:+15526014 | None:intergenic |
AATGGGCAGTGGAAACGAAA+GGG | 0.546414 | 8_1:-15523878 | Msa1181210:CDS |
TATCTTTCACACAAGGTCGA+TGG | 0.560484 | 8_1:-15524773 | Msa1181210:CDS |
GGTGATACTTTGTCTTCAGA+AGG | 0.560976 | 8_1:+15523652 | None:intergenic |
GAAAGCTTATTATTGCTGAT+GGG | 0.561165 | 8_1:+15522036 | None:intergenic |
CAAGAAGCATCAACCTGATG+TGG | 0.562937 | 8_1:+15524660 | None:intergenic |
AGGGCCCAAATTATATATGT+TGG | 0.563289 | 8_1:-15526300 | Msa1181210:exon |
CTTCCTTGTCGAGATAAAGC+TGG | 0.565607 | 8_1:-15524459 | Msa1181210:CDS |
CATCCAGAGTTCCTGCAGAT+GGG | 0.568693 | 8_1:-15524365 | Msa1181210:CDS |
ATTGAGCTCAAAGACCAGCT+TGG | 0.574813 | 8_1:+15524243 | None:intergenic |
GACGACGACTGTGGTTCTTG+TGG | 0.578532 | 8_1:+15521128 | None:intergenic |
AAATGGATTTGGGGAAGAGA+TGG | 0.580152 | 8_1:+15525931 | None:intergenic |
GGCATAGAAAGGTGCATGTG+AGG | 0.582490 | 8_1:+15523912 | None:intergenic |
AATGCAAGTACAATGGGCAG+TGG | 0.583341 | 8_1:+15520946 | None:intergenic |
TAATGGGCAGTGGAAACGAA+AGG | 0.583530 | 8_1:-15523879 | Msa1181210:CDS |
GAAGCATCAACCTGATGTGG+AGG | 0.588264 | 8_1:+15524663 | None:intergenic |
ATGTGCTGCAAATTGTGCCT+TGG | 0.588552 | 8_1:-15523765 | Msa1181210:CDS |
AGGAGCAGAATAAGAGCTAG+AGG | 0.588996 | 8_1:+15524578 | None:intergenic |
CTTCTGTGTAAGAGAGAACA+GGG | 0.589432 | 8_1:+15521847 | None:intergenic |
GCACAGAAAATCTTACTCCA+TGG | 0.592172 | 8_1:-15524491 | Msa1181210:CDS |
CAGCTTTATCTCGACAAGGA+AGG | 0.593637 | 8_1:+15524460 | None:intergenic |
ACTAACACTACAAAGTTGGA+TGG | 0.594547 | 8_1:+15521018 | None:intergenic |
GTCGAATACTGAATAAACTC+AGG | 0.595554 | 8_1:-15521175 | Msa1181210:CDS |
GAGTAATGTCTACCTTCAAG+TGG | 0.595849 | 8_1:-15524178 | Msa1181210:CDS |
ACTGAAATCAGGAGTTGTCA+AGG | 0.599468 | 8_1:+15521812 | None:intergenic |
ATGCGCGAGAACTTTGCGAT+CGG | 0.602830 | 8_1:+15526007 | None:intergenic |
AATCCCTGATTAGCATCTGG+TGG | 0.604542 | 8_1:+15522065 | None:intergenic |
TCTTCGGAGTACATTTAGCA+AGG | 0.605313 | 8_1:+15521734 | None:intergenic |
GAGATGGTGATGACGAGCGA+AGG | 0.605747 | 8_1:+15525947 | None:intergenic |
ACTGCCCACAGTTCAACTCC+AGG | 0.606672 | 8_1:+15524696 | None:intergenic |
ATCCCTGATTAGCATCTGGT+GGG | 0.615470 | 8_1:+15522066 | None:intergenic |
AGCCTCCTGGAGTTGAACTG+TGG | 0.620819 | 8_1:-15524701 | Msa1181210:CDS |
GTCTACCTTCAAGTGGAGAG+AGG | 0.621948 | 8_1:-15524171 | Msa1181210:CDS |
TACCCACCAGATGCTAATCA+GGG | 0.624583 | 8_1:-15522068 | Msa1181210:CDS |
CTGAAATCAGGAGTTGTCAA+GGG | 0.625231 | 8_1:+15521813 | None:intergenic |
ATCACCAGGAGTGATGGAGC+TGG | 0.626886 | 8_1:-15523635 | Msa1181210:CDS |
ACCTGTAATCTAGACAACAT+TGG | 0.628281 | 8_1:+15521963 | None:intergenic |
AATTTGATTTAAGCTTAACA+TGG | 0.630678 | 8_1:-15523957 | Msa1181210:CDS |
AGTTAGCAAGCAAGCAACGA+TGG | 0.632175 | 8_1:-15526147 | Msa1181210:CDS |
CCAGCTGAGAAATGGATTTG+GGG | 0.632982 | 8_1:+15525922 | None:intergenic |
TGGAACTATGAAAGATGGGG+TGG | 0.633974 | 8_1:-15524753 | Msa1181210:CDS |
TTGGTTACACGTGTTAAATG+TGG | 0.636715 | 8_1:+15520887 | None:intergenic |
CCGAAGACGAGTTGGAGAGG+AGG | 0.641791 | 8_1:-15521718 | Msa1181210:CDS |
ATGGGCAGTGGAAACGAAAG+GGG | 0.643566 | 8_1:-15523877 | Msa1181210:CDS |
ACTCCGAAGACGAGTTGGAG+AGG | 0.645411 | 8_1:-15521721 | Msa1181210:CDS |
TCTGAAGACAAAGTATCACC+AGG | 0.647486 | 8_1:-15523649 | Msa1181210:CDS |
AAGCATCAACCTGATGTGGA+GGG | 0.647641 | 8_1:+15524664 | None:intergenic |
ATAGAAAGGTGCATGTGAGG+AGG | 0.648484 | 8_1:+15523915 | None:intergenic |
TAATCTCACAAGGAAATCTG+AGG | 0.648866 | 8_1:+15523611 | None:intergenic |
GTTTATTCAGTATTCGACGA+AGG | 0.650092 | 8_1:+15521180 | None:intergenic |
ACAGCAGATTTAATCTCACA+AGG | 0.652768 | 8_1:+15523601 | None:intergenic |
TAATATACCTTAATATACCA+AGG | 0.654694 | 8_1:+15523748 | None:intergenic |
TGGCCGGAATTGCTGTTGTG+TGG | 0.659350 | 8_1:-15521061 | Msa1181210:CDS |
AGTATCTAATACGCCAGACA+GGG | 0.665813 | 8_1:-15524052 | Msa1181210:CDS |
CGATGGAACTATGAAAGATG+GGG | 0.668439 | 8_1:-15524756 | Msa1181210:CDS |
GAAATCTACAGAATTGACCA+AGG | 0.675528 | 8_1:-15523836 | Msa1181210:CDS |
ATGGAATTATCTTTCACACA+AGG | 0.675732 | 8_1:-15524780 | Msa1181210:CDS |
CAAGGAAGGAGTTTCAACCA+TGG | 0.692207 | 8_1:+15524474 | None:intergenic |
AGTCCAGCTTTATCTCGACA+AGG | 0.709264 | 8_1:+15524456 | None:intergenic |
GCCCACAGTTCAACTCCAGG+AGG | 0.711482 | 8_1:+15524699 | None:intergenic |
AAGGATGATGACGACGACTG+TGG | 0.723942 | 8_1:+15521119 | None:intergenic |
TCTGTGCAGACAGCTTCACG+CGG | 0.737448 | 8_1:+15524507 | None:intergenic |
ACAGTGACGTTCGTTCATGG+CGG | 0.743306 | 8_1:-15526223 | Msa1181210:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATATTTCTTTTTCTTT+TGG | - | chr8_1:15523624-15523643 | Msa1181210:CDS | 10.0% |
!! | TATAAAAAAATGTAAATCAT+AGG | + | chr8_1:15524170-15524189 | None:intergenic | 10.0% |
!! | TTCTGTATAAATTGTTAATT+TGG | - | chr8_1:15521341-15521360 | Msa1181210:intron | 15.0% |
!! | AATCAAGAATTTAATAATCT+AGG | + | chr8_1:15524346-15524365 | None:intergenic | 15.0% |
!! | AAAAACAATAAAAAAAGGCT+AGG | - | chr8_1:15520833-15520852 | Msa1181210:three_prime_UTR | 20.0% |
!! | AAAACAATAAAAAAAGGCTA+GGG | - | chr8_1:15520834-15520853 | Msa1181210:three_prime_UTR | 20.0% |
!! | TATGTAAAAGAATGTTGATA+AGG | - | chr8_1:15522080-15522099 | Msa1181210:CDS | 20.0% |
!! | ACATGTTAATTAGTATATTC+AGG | + | chr8_1:15522308-15522327 | None:intergenic | 20.0% |
!!! | AATTTGATTTAAGCTTAACA+TGG | - | chr8_1:15523196-15523215 | Msa1181210:intron | 20.0% |
!! | TAATATACCTTAATATACCA+AGG | + | chr8_1:15523408-15523427 | None:intergenic | 20.0% |
!! | TTCATCAACTAATAATTGTA+AGG | + | chr8_1:15523436-15523455 | None:intergenic | 20.0% |
!! | TCTAAATATAGAGTTTGATA+AGG | - | chr8_1:15523575-15523594 | Msa1181210:intron | 20.0% |
!! | TGTTTAATAACATTAACTTC+CGG | + | chr8_1:15523684-15523703 | None:intergenic | 20.0% |
!! | TAGACTGTTAATGATATTAT+AGG | - | chr8_1:15523744-15523763 | Msa1181210:CDS | 20.0% |
!! | TAATGATATTATAGGAAAGT+AGG | - | chr8_1:15523752-15523771 | Msa1181210:CDS | 20.0% |
!!! | TTGAATTTGAGTTATCATAA+AGG | - | chr8_1:15524470-15524489 | Msa1181210:CDS | 20.0% |
!!! | TGAATTTGAGTTATCATAAA+GGG | - | chr8_1:15524471-15524490 | Msa1181210:CDS | 20.0% |
!! | AAGAAGATAAATGCTTAAAT+AGG | + | chr8_1:15524730-15524749 | None:intergenic | 20.0% |
!!! | TTGTTCTAACATATTTTTGT+TGG | - | chr8_1:15525030-15525049 | Msa1181210:intron | 20.0% |
!! | GAAAACAATCTTATATTTAC+TGG | + | chr8_1:15525249-15525268 | None:intergenic | 20.0% |
!! | AAAAAAAAAAACCATGTAGA+AGG | + | chr8_1:15525670-15525689 | None:intergenic | 20.0% |
!! | ATTGCAAAAAAAATTAGTCA+TGG | + | chr8_1:15525727-15525746 | None:intergenic | 20.0% |
!! | ATCTAAAAACAGAAAAATGT+CGG | + | chr8_1:15525936-15525955 | None:intergenic | 20.0% |
!!! | AGCACTTTAAAAATCAATTT+TGG | + | chr8_1:15526067-15526086 | None:intergenic | 20.0% |
!!! | ATTGATTTTTAAAGTGCTAT+TGG | - | chr8_1:15526069-15526088 | Msa1181210:CDS | 20.0% |
! | TTGGCCAACATATATAATTT+GGG | + | chr8_1:15520860-15520879 | None:intergenic | 25.0% |
! | TAATAAACTGCATAAAGCAT+GGG | - | chr8_1:15521806-15521825 | Msa1181210:CDS | 25.0% |
! | CTTAAAGTACAATACTTAGA+CGG | + | chr8_1:15521855-15521874 | None:intergenic | 25.0% |
!! | ATTCTTTTACATAGTAGCAT+AGG | + | chr8_1:15522073-15522092 | None:intergenic | 25.0% |
! | TGAATAATGCAAGAATTTAG+AGG | + | chr8_1:15522118-15522137 | None:intergenic | 25.0% |
!! | ATAATGCTTCTATAATTTGC+AGG | + | chr8_1:15522274-15522293 | None:intergenic | 25.0% |
! | TAAAAACTCCTGTAAATAGA+TGG | + | chr8_1:15522742-15522761 | None:intergenic | 25.0% |
!! | TGGTTGAATCTTTATTTCAT+CGG | + | chr8_1:15522893-15522912 | None:intergenic | 25.0% |
! | ATATTTGGACGAAAAATCAA+TGG | - | chr8_1:15522931-15522950 | Msa1181210:intron | 25.0% |
!! | TATGCCAGTAGATTTTTAAT+GGG | - | chr8_1:15523258-15523277 | Msa1181210:intron | 25.0% |
! | GGCTTACACTTAAAAAAAAA+GGG | + | chr8_1:15524078-15524097 | None:intergenic | 25.0% |
!!! | TTTTTTTATATTTCTGCCAC+AGG | - | chr8_1:15524575-15524594 | Msa1181210:CDS | 25.0% |
! | CCTACATTCATGTTTAATTA+GGG | + | chr8_1:15524820-15524839 | None:intergenic | 25.0% |
! | ACCTACATTCATGTTTAATT+AGG | + | chr8_1:15524821-15524840 | None:intergenic | 25.0% |
! | CATATCTACAAATAAGTTCT+TGG | + | chr8_1:15524896-15524915 | None:intergenic | 25.0% |
!! | TATGTTCATTAGACCATTTT+AGG | - | chr8_1:15524923-15524942 | Msa1181210:intron | 25.0% |
!! | ACAGTTTTTGCTTTGTATTT+TGG | - | chr8_1:15525394-15525413 | Msa1181210:intron | 25.0% |
!!! | GAAAGACTTTTGAAAAACAA+AGG | - | chr8_1:15525457-15525476 | Msa1181210:intron | 25.0% |
!! | AATCAATTTTGGACTAATGA+AGG | + | chr8_1:15526056-15526075 | None:intergenic | 25.0% |
! | GAAATTAATGCAAGTACAAT+GGG | + | chr8_1:15526216-15526235 | None:intergenic | 25.0% |
! | AGAAATTAATGCAAGTACAA+TGG | + | chr8_1:15526217-15526236 | None:intergenic | 25.0% |
GTTGGCCAACATATATAATT+TGG | + | chr8_1:15520861-15520880 | None:intergenic | 30.0% | |
!! | TGAATTTTTGGGCTTTATGT+TGG | + | chr8_1:15520879-15520898 | None:intergenic | 30.0% |
! | CTTTCTCGTGTTGAATTTTT+GGG | + | chr8_1:15520890-15520909 | None:intergenic | 30.0% |
! | ACTTTCTCGTGTTGAATTTT+TGG | + | chr8_1:15520891-15520910 | None:intergenic | 30.0% |
AATGATTCTATCATCGTCTT+CGG | - | chr8_1:15521072-15521091 | Msa1181210:CDS | 30.0% | |
! | AGTAGATGAAGAATTTTCAG+AGG | - | chr8_1:15521102-15521121 | Msa1181210:CDS | 30.0% |
! | ACTTTCCTCTTTCTCATTTT+AGG | - | chr8_1:15521266-15521285 | Msa1181210:intron | 30.0% |
! | CTTTCCTCTTTCTCATTTTA+GGG | - | chr8_1:15521267-15521286 | Msa1181210:intron | 30.0% |
TATACAGAAAGCAACGAATA+AGG | + | chr8_1:15521330-15521349 | None:intergenic | 30.0% | |
CAGATCTTGTATTCAATTTG+AGG | + | chr8_1:15521388-15521407 | None:intergenic | 30.0% | |
! | GAGTTTAAGGTATAACTGAA+GGG | + | chr8_1:15521452-15521471 | None:intergenic | 30.0% |
! | AGAGTTTAAGGTATAACTGA+AGG | + | chr8_1:15521453-15521472 | None:intergenic | 30.0% |
GTAATAAACTGCATAAAGCA+TGG | - | chr8_1:15521805-15521824 | Msa1181210:CDS | 30.0% | |
AATAAACTGCATAAAGCATG+GGG | - | chr8_1:15521807-15521826 | Msa1181210:CDS | 30.0% | |
TAGTTTAACCCTTCAATAGT+TGG | - | chr8_1:15521889-15521908 | Msa1181210:intron | 30.0% | |
GAAACAAACCAACTATTGAA+GGG | + | chr8_1:15521900-15521919 | None:intergenic | 30.0% | |
TGAAACAAACCAACTATTGA+AGG | + | chr8_1:15521901-15521920 | None:intergenic | 30.0% | |
TTTGCACATTCACATTATGA+AGG | - | chr8_1:15521926-15521945 | Msa1181210:intron | 30.0% | |
TTGCACATTCACATTATGAA+GGG | - | chr8_1:15521927-15521946 | Msa1181210:intron | 30.0% | |
CAAAAGCAAAATCCTTTACT+TGG | - | chr8_1:15522140-15522159 | Msa1181210:intron | 30.0% | |
! | ATTAACATGTTGATTAGTGC+TGG | - | chr8_1:15522318-15522337 | Msa1181210:intron | 30.0% |
GAAATTTCACGTTAAAGCAA+TGG | - | chr8_1:15522354-15522373 | Msa1181210:intron | 30.0% | |
ATGGAATTATCTTTCACACA+AGG | - | chr8_1:15522373-15522392 | Msa1181210:intron | 30.0% | |
!!! | TTTGCATTTTGGCTTGATAT+TGG | + | chr8_1:15522433-15522452 | None:intergenic | 30.0% |
AATTTAACCCATTCTCTATC+AGG | - | chr8_1:15522520-15522539 | Msa1181210:intron | 30.0% | |
AATAGATGGTCTATCCATTA+AGG | + | chr8_1:15522728-15522747 | None:intergenic | 30.0% | |
AAATAAAGATTCAACCAAGC+TGG | - | chr8_1:15522896-15522915 | Msa1181210:intron | 30.0% | |
AAAAATCTACTGGCATAGAA+AGG | + | chr8_1:15523255-15523274 | None:intergenic | 30.0% | |
! | CTATGCCAGTAGATTTTTAA+TGG | - | chr8_1:15523257-15523276 | Msa1181210:intron | 30.0% |
ACACTTCTCTTCAACATTAT+TGG | + | chr8_1:15523355-15523374 | None:intergenic | 30.0% | |
AATTGTGCCTTGGTATATTA+AGG | - | chr8_1:15523398-15523417 | Msa1181210:intron | 30.0% | |
CAAACTTTGAATAGTTCAGA+AGG | + | chr8_1:15523819-15523838 | None:intergenic | 30.0% | |
CTTCTGAACTATTCAAAGTT+TGG | - | chr8_1:15523817-15523836 | Msa1181210:CDS | 30.0% | |
! | TAAAAAGCCAAGTTTGAGAT+GGG | + | chr8_1:15523900-15523919 | None:intergenic | 30.0% |
TTAAAAAGCCAAGTTTGAGA+TGG | + | chr8_1:15523901-15523920 | None:intergenic | 30.0% | |
GGGCTTACACTTAAAAAAAA+AGG | + | chr8_1:15524079-15524098 | None:intergenic | 30.0% | |
TGAAGTATGAACCAGAAAAT+GGG | + | chr8_1:15524099-15524118 | None:intergenic | 30.0% | |
TCATTATGAGTTACTTGAGA+TGG | - | chr8_1:15524120-15524139 | Msa1181210:CDS | 30.0% | |
AAAACTGACAATGTTGTAAC+TGG | - | chr8_1:15524386-15524405 | Msa1181210:CDS | 30.0% | |
CAAACTTTGTTAGAATGTCT+TGG | + | chr8_1:15524453-15524472 | None:intergenic | 30.0% | |
! | TTTGAGTTATCATAAAGGGT+AGG | - | chr8_1:15524475-15524494 | Msa1181210:CDS | 30.0% |
CTCAATCAAAAGAGTAACTA+GGG | + | chr8_1:15524630-15524649 | None:intergenic | 30.0% | |
ACTCAATCAAAAGAGTAACT+AGG | + | chr8_1:15524631-15524650 | None:intergenic | 30.0% | |
! | ATCAATGAGTTGAAGAAACT+GGG | - | chr8_1:15524765-15524784 | Msa1181210:CDS | 30.0% |
TTTAATTAGGGCCAATTAAC+AGG | + | chr8_1:15524808-15524827 | None:intergenic | 30.0% | |
CCCTAATTAAACATGAATGT+AGG | - | chr8_1:15524817-15524836 | Msa1181210:intron | 30.0% | |
!! | TTCATTAGACCATTTTAGGA+TGG | - | chr8_1:15524927-15524946 | Msa1181210:intron | 30.0% |
! | TTTTTCCATCCATCCTAAAA+TGG | + | chr8_1:15524939-15524958 | None:intergenic | 30.0% |
!!! | ATTTTTGTTGGTTTGCACAT+AGG | - | chr8_1:15525042-15525061 | Msa1181210:intron | 30.0% |
!!! | TTTTTGTTGGTTTGCACATA+GGG | - | chr8_1:15525043-15525062 | Msa1181210:intron | 30.0% |
GAAAGCTTATTATTGCTGAT+GGG | + | chr8_1:15525120-15525139 | None:intergenic | 30.0% | |
TTGTCTAGATTACAGGTTAT+TGG | - | chr8_1:15525196-15525215 | Msa1181210:intron | 30.0% | |
GAGTTATGACCAAAAAAAGA+GGG | + | chr8_1:15525227-15525246 | None:intergenic | 30.0% | |
! | TGTGTTCTATTTTATGCTTC+AGG | + | chr8_1:15525601-15525620 | None:intergenic | 30.0% |
TACATGTAGTAATCGAAAAC+TGG | + | chr8_1:15525793-15525812 | None:intergenic | 30.0% | |
GTTATCTAATATCTAGTGCA+TGG | - | chr8_1:15525856-15525875 | Msa1181210:intron | 30.0% | |
!!! | GATTTTTAAAGTGCTATTGG+TGG | - | chr8_1:15526072-15526091 | Msa1181210:CDS | 30.0% |
TACAACTAACACTACAAAGT+TGG | + | chr8_1:15526142-15526161 | None:intergenic | 30.0% | |
!!! | AATGGGTTCTAAACAAGTTT+TGG | - | chr8_1:15526291-15526310 | Msa1181210:exon | 30.0% |
AGGGCCCAAATTATATATGT+TGG | - | chr8_1:15520853-15520872 | Msa1181210:three_prime_UTR | 35.0% | |
GAAGACGATGATAGAATCAT+TGG | + | chr8_1:15521073-15521092 | None:intergenic | 35.0% | |
CTAACCCTAAAATGAGAAAG+AGG | + | chr8_1:15521274-15521293 | None:intergenic | 35.0% | |
!!! | CTCTTTCTCATTTTAGGGTT+AGG | - | chr8_1:15521272-15521291 | Msa1181210:intron | 35.0% |
AGGGTTTAACGATCATATCT+TGG | + | chr8_1:15521433-15521452 | None:intergenic | 35.0% | |
TCGACTCATAGAAGAGTTTA+AGG | + | chr8_1:15521465-15521484 | None:intergenic | 35.0% | |
! | GACTGACTCAAATTCTACTA+TGG | - | chr8_1:15521635-15521654 | Msa1181210:intron | 35.0% |
ATTCAACTCTCTTCGTCAAA+TGG | + | chr8_1:15521692-15521711 | None:intergenic | 35.0% | |
ATAAACTGCATAAAGCATGG+GGG | - | chr8_1:15521808-15521827 | Msa1181210:CDS | 35.0% | |
CATAGTAGCATAGGACAAAA+TGG | + | chr8_1:15522064-15522083 | None:intergenic | 35.0% | |
TCGATGGAACTATGAAAGAT+GGG | - | chr8_1:15522396-15522415 | Msa1181210:intron | 35.0% | |
CTCTTATTCTGCTCCTAAAT+GGG | - | chr8_1:15522582-15522601 | Msa1181210:intron | 35.0% | |
! | GCCTTAGGTAGTTTAAGATA+TGG | - | chr8_1:15522616-15522635 | Msa1181210:intron | 35.0% |
GCCATATCTTAAACTACCTA+AGG | + | chr8_1:15522620-15522639 | None:intergenic | 35.0% | |
TGGATAGACCATCTATTTAC+AGG | - | chr8_1:15522731-15522750 | Msa1181210:intron | 35.0% | |
! | ATACCAGCTTTCTGAAAATC+AGG | + | chr8_1:15522862-15522881 | None:intergenic | 35.0% |
TGGTCTTTGAGCTCAATATT+TGG | - | chr8_1:15522916-15522935 | Msa1181210:intron | 35.0% | |
TTGGACGAAAAATCAATGGT+AGG | - | chr8_1:15522935-15522954 | Msa1181210:intron | 35.0% | |
! | AATCAATGGTAGGTGTGTTT+TGG | - | chr8_1:15522945-15522964 | Msa1181210:intron | 35.0% |
! | CATATGCAGCAGTATTCTTT+TGG | + | chr8_1:15523032-15523051 | None:intergenic | 35.0% |
!!! | CAAGTATAGACGTTTTGAGA+AGG | - | chr8_1:15523064-15523083 | Msa1181210:intron | 35.0% |
ACTGCCCATTAAAAATCTAC+TGG | + | chr8_1:15523265-15523284 | None:intergenic | 35.0% | |
!! | AGTAGATTTTTAATGGGCAG+TGG | - | chr8_1:15523264-15523283 | Msa1181210:intron | 35.0% |
GGTCAATTCTGTAGATTTCA+AGG | + | chr8_1:15523316-15523335 | None:intergenic | 35.0% | |
GAAATCTACAGAATTGACCA+AGG | - | chr8_1:15523317-15523336 | Msa1181210:intron | 35.0% | |
TAATCTCACAAGGAAATCTG+AGG | + | chr8_1:15523545-15523564 | None:intergenic | 35.0% | |
ACAGCAGATTTAATCTCACA+AGG | + | chr8_1:15523555-15523574 | None:intergenic | 35.0% | |
TTGGATATTTACCTCACTCT+TGG | - | chr8_1:15523643-15523662 | Msa1181210:CDS | 35.0% | |
! | TTGGTTTGATTAACCAACTC+CGG | - | chr8_1:15523662-15523681 | Msa1181210:CDS | 35.0% |
ATAACATTAACTTCCGGAGT+TGG | + | chr8_1:15523678-15523697 | None:intergenic | 35.0% | |
! | TTAAGTGTAAGCCCATTTTC+TGG | - | chr8_1:15524085-15524104 | Msa1181210:CDS | 35.0% |
GTGAAGTATGAACCAGAAAA+TGG | + | chr8_1:15524100-15524119 | None:intergenic | 35.0% | |
TCAAGCCCATTTCGTTAAAT+TGG | - | chr8_1:15524317-15524336 | Msa1181210:CDS | 35.0% | |
CAAGCCCATTTCGTTAAATT+GGG | - | chr8_1:15524318-15524337 | Msa1181210:CDS | 35.0% | |
TCAAAAGAGTAACTAGGGAA+AGG | + | chr8_1:15524625-15524644 | None:intergenic | 35.0% | |
CTAAACATCTAAACCAAGTC+AGG | + | chr8_1:15524663-15524682 | None:intergenic | 35.0% | |
! | GATCAATGAGTTGAAGAAAC+TGG | - | chr8_1:15524764-15524783 | Msa1181210:CDS | 35.0% |
ATAAGTTCTTGGCACATTGA+TGG | + | chr8_1:15524885-15524904 | None:intergenic | 35.0% | |
!!! | TTAGACCATTTTAGGATGGA+TGG | - | chr8_1:15524931-15524950 | Msa1181210:intron | 35.0% |
CACAACTTATGTCACTAAGA+GGG | + | chr8_1:15525006-15525025 | None:intergenic | 35.0% | |
GGAAAGCTTATTATTGCTGA+TGG | + | chr8_1:15525121-15525140 | None:intergenic | 35.0% | |
ACCTGTAATCTAGACAACAT+TGG | + | chr8_1:15525193-15525212 | None:intergenic | 35.0% | |
!!! | TTGGAGTTTCCCTCTTTTTT+TGG | - | chr8_1:15525215-15525234 | Msa1181210:intron | 35.0% |
GGAGTTATGACCAAAAAAAG+AGG | + | chr8_1:15525228-15525247 | None:intergenic | 35.0% | |
! | TGTTTTCATACCTAACAGTC+TGG | - | chr8_1:15525262-15525281 | Msa1181210:intron | 35.0% |
CATTAAAGATCCAGACTGTT+AGG | + | chr8_1:15525275-15525294 | None:intergenic | 35.0% | |
TTGTAAGGCATACTGAAATC+AGG | + | chr8_1:15525355-15525374 | None:intergenic | 35.0% | |
! | GTAATTGTGATGACGTTGTA+AGG | + | chr8_1:15525370-15525389 | None:intergenic | 35.0% |
! | GTGTAACATCTGATAGTGTT+TGG | - | chr8_1:15525533-15525552 | Msa1181210:intron | 35.0% |
TTTGGTAGACATGTTAGAAC+AGG | - | chr8_1:15525551-15525570 | Msa1181210:intron | 35.0% | |
AAAAAACCATGTAGAAGGTG+AGG | + | chr8_1:15525665-15525684 | None:intergenic | 35.0% | |
! | AGTGTGTGCGTGTAATATTT+TGG | - | chr8_1:15525752-15525771 | Msa1181210:intron | 35.0% |
AGATATGGCTATATAGCTCA+TGG | + | chr8_1:15525888-15525907 | None:intergenic | 35.0% | |
GTTTATTCAGTATTCGACGA+AGG | + | chr8_1:15525976-15525995 | None:intergenic | 35.0% | |
GTCGAATACTGAATAAACTC+AGG | - | chr8_1:15525978-15525997 | Msa1181210:CDS | 35.0% | |
ACTAACACTACAAAGTTGGA+TGG | + | chr8_1:15526138-15526157 | None:intergenic | 35.0% | |
TTGGTTACACGTGTTAAATG+TGG | + | chr8_1:15526269-15526288 | None:intergenic | 35.0% | |
TAACACGTGTAACCAACAAA+TGG | - | chr8_1:15526273-15526292 | Msa1181210:CDS | 35.0% | |
AACACGTGTAACCAACAAAT+GGG | - | chr8_1:15526274-15526293 | Msa1181210:CDS | 35.0% | |
! | CTTGTTTAGAACCCATTTGT+TGG | + | chr8_1:15526288-15526307 | None:intergenic | 35.0% |
ATGATCAGCAATAGGAGCTT+CGG | + | chr8_1:15521185-15521204 | None:intergenic | 40.0% | |
! | AAATGGATTTGGGGAAGAGA+TGG | + | chr8_1:15521225-15521244 | None:intergenic | 40.0% |
! | ACCAGCTGAGAAATGGATTT+GGG | + | chr8_1:15521235-15521254 | None:intergenic | 40.0% |
CAGACTGATGATCACAGAAA+AGG | + | chr8_1:15521745-15521764 | None:intergenic | 40.0% | |
TAAACTGCATAAAGCATGGG+GGG | - | chr8_1:15521809-15521828 | Msa1181210:CDS | 40.0% | |
CAAAATCCTTTACTTGGCAC+CGG | - | chr8_1:15522146-15522165 | Msa1181210:intron | 40.0% | |
AGTCCCATTACATTAGCATC+CGG | + | chr8_1:15522168-15522187 | None:intergenic | 40.0% | |
! | TGCTAATGTAATGGGACTTC+TGG | - | chr8_1:15522170-15522189 | Msa1181210:intron | 40.0% |
! | GCTAATGTAATGGGACTTCT+GGG | - | chr8_1:15522171-15522190 | Msa1181210:intron | 40.0% |
! | ACATGTTGATTAGTGCTGGA+TGG | - | chr8_1:15522322-15522341 | Msa1181210:intron | 40.0% |
TATCTTTCACACAAGGTCGA+TGG | - | chr8_1:15522380-15522399 | Msa1181210:intron | 40.0% | |
GTCGATGGAACTATGAAAGA+TGG | - | chr8_1:15522395-15522414 | Msa1181210:intron | 40.0% | |
CGATGGAACTATGAAAGATG+GGG | - | chr8_1:15522397-15522416 | Msa1181210:intron | 40.0% | |
GAAGAGACCTGATAGAGAAT+GGG | + | chr8_1:15522530-15522549 | None:intergenic | 40.0% | |
AGAAGAGACCTGATAGAGAA+TGG | + | chr8_1:15522531-15522550 | None:intergenic | 40.0% | |
AATAAGAGCTAGAGGACTCT+AGG | + | chr8_1:15522570-15522589 | None:intergenic | 40.0% | |
GCTCTTATTCTGCTCCTAAA+TGG | - | chr8_1:15522581-15522600 | Msa1181210:intron | 40.0% | |
GCACAGAAAATCTTACTCCA+TGG | - | chr8_1:15522662-15522681 | Msa1181210:intron | 40.0% | |
GAGTAATGTCTACCTTCAAG+TGG | - | chr8_1:15522975-15522994 | Msa1181210:intron | 40.0% | |
AAGTATCTAATACGCCAGAC+AGG | - | chr8_1:15523100-15523119 | Msa1181210:intron | 40.0% | |
AGTATCTAATACGCCAGACA+GGG | - | chr8_1:15523101-15523120 | Msa1181210:intron | 40.0% | |
!! | CATGGAAGTATCCAGTTGTT+TGG | - | chr8_1:15523214-15523233 | Msa1181210:intron | 40.0% |
GGTGATACTTTGTCTTCAGA+AGG | + | chr8_1:15523504-15523523 | None:intergenic | 40.0% | |
! | TCTGAAGACAAAGTATCACC+AGG | - | chr8_1:15523504-15523523 | Msa1181210:intron | 40.0% |
AAGGTGTGCTCAAATTCTTC+TGG | - | chr8_1:15523594-15523613 | Msa1181210:CDS | 40.0% | |
GGTTAATCAAACCAAGAGTG+AGG | + | chr8_1:15523657-15523676 | None:intergenic | 40.0% | |
AGCTAAGCCTGACTTATCTT+AGG | - | chr8_1:15523854-15523873 | Msa1181210:CDS | 40.0% | |
AGTAAGCCCTTAAACCCATT+TGG | - | chr8_1:15523924-15523943 | Msa1181210:CDS | 40.0% | |
! | GCCAATCCAAATGGGTTTAA+GGG | + | chr8_1:15523933-15523952 | None:intergenic | 40.0% |
AGATGGATGAGTCATGAGTT+AGG | - | chr8_1:15524137-15524156 | Msa1181210:CDS | 40.0% | |
GGCTCCCAATTTAACGAAAT+GGG | + | chr8_1:15524325-15524344 | None:intergenic | 40.0% | |
AGGCTCCCAATTTAACGAAA+TGG | + | chr8_1:15524326-15524345 | None:intergenic | 40.0% | |
ATACTACCTTTAAACCAGCC+CGG | - | chr8_1:15524508-15524527 | Msa1181210:CDS | 40.0% | |
ACTTCATGGAAAGAAACCTG+TGG | + | chr8_1:15524594-15524613 | None:intergenic | 40.0% | |
!!! | GAAACTGGGTTTTATTGTGC+TGG | - | chr8_1:15524779-15524798 | Msa1181210:CDS | 40.0% |
AGGTATATACCATTGCAGCA+TGG | - | chr8_1:15524837-15524856 | Msa1181210:intron | 40.0% | |
CTTATGTCACTAAGAGGGAT+CGG | + | chr8_1:15525001-15525020 | None:intergenic | 40.0% | |
CCACAACTTATGTCACTAAG+AGG | + | chr8_1:15525007-15525026 | None:intergenic | 40.0% | |
CCTCTTAGTGACATAAGTTG+TGG | - | chr8_1:15525004-15525023 | Msa1181210:intron | 40.0% | |
TCAAATCCCTGATTAGCATC+TGG | + | chr8_1:15525094-15525113 | None:intergenic | 40.0% | |
GCCAATGTTGTCTAGATTAC+AGG | - | chr8_1:15525189-15525208 | Msa1181210:intron | 40.0% | |
ACAGTCTGGATCTTTAATGC+AGG | - | chr8_1:15525276-15525295 | Msa1181210:intron | 40.0% | |
CTTCTGTGTAAGAGAGAACA+GGG | + | chr8_1:15525309-15525328 | None:intergenic | 40.0% | |
ACTTCTGTGTAAGAGAGAAC+AGG | + | chr8_1:15525310-15525329 | None:intergenic | 40.0% | |
CTGAAATCAGGAGTTGTCAA+GGG | + | chr8_1:15525343-15525362 | None:intergenic | 40.0% | |
ACTGAAATCAGGAGTTGTCA+AGG | + | chr8_1:15525344-15525363 | None:intergenic | 40.0% | |
TCTTCGGAGTACATTTAGCA+AGG | + | chr8_1:15525422-15525441 | None:intergenic | 40.0% | |
!! | GAAGGTGAGGATGTTTTTGT+GGG | + | chr8_1:15525652-15525671 | None:intergenic | 40.0% |
!! | AGAAGGTGAGGATGTTTTTG+TGG | + | chr8_1:15525653-15525672 | None:intergenic | 40.0% |
AAACATCCTCACCTTCTACA+TGG | - | chr8_1:15525656-15525675 | Msa1181210:intron | 40.0% | |
!!! | GTGCGTGTAATATTTTGGCT+TGG | - | chr8_1:15525757-15525776 | Msa1181210:intron | 40.0% |
CTCAGCATGAGTGAAAGATA+TGG | + | chr8_1:15525903-15525922 | None:intergenic | 40.0% | |
! | TTTAAAGTGCTATTGGTGGC+CGG | - | chr8_1:15526076-15526095 | Msa1181210:CDS | 40.0% |
! | CGTTGCTTGCTTGCTAACTT+TGG | + | chr8_1:15521005-15521024 | None:intergenic | 45.0% |
AGTTAGCAAGCAAGCAACGA+TGG | - | chr8_1:15521006-15521025 | Msa1181210:three_prime_UTR | 45.0% | |
AGAACTTTGCGATCGGGTAA+GGG | + | chr8_1:15521142-15521161 | None:intergenic | 45.0% | |
GCGAAGGAATGATCAGCAAT+AGG | + | chr8_1:15521193-15521212 | None:intergenic | 45.0% | |
! | CCAGCTGAGAAATGGATTTG+GGG | + | chr8_1:15521234-15521253 | None:intergenic | 45.0% |
! | CACCAGCTGAGAAATGGATT+TGG | + | chr8_1:15521236-15521255 | None:intergenic | 45.0% |
AAGACACACCAGCTGAGAAA+TGG | + | chr8_1:15521242-15521261 | None:intergenic | 45.0% | |
TCTATGAGTCGAGTCTGTGT+AGG | - | chr8_1:15521473-15521492 | Msa1181210:intron | 45.0% | |
CACGAGATTACCTAGACTCT+CGG | - | chr8_1:15521499-15521518 | Msa1181210:intron | 45.0% | |
ACGAGATTACCTAGACTCTC+GGG | - | chr8_1:15521500-15521519 | Msa1181210:intron | 45.0% | |
GCGAGACAACTTCAACTCAA+TGG | + | chr8_1:15521723-15521742 | None:intergenic | 45.0% | |
AAACTGCATAAAGCATGGGG+GGG | - | chr8_1:15521810-15521829 | Msa1181210:CDS | 45.0% | |
GCACCGGATGCTAATGTAAT+GGG | - | chr8_1:15522162-15522181 | Msa1181210:intron | 45.0% | |
! | TTGATTAGTGCTGGATGGAC+AGG | - | chr8_1:15522327-15522346 | Msa1181210:intron | 45.0% |
TGGAACTATGAAAGATGGGG+TGG | - | chr8_1:15522400-15522419 | Msa1181210:intron | 45.0% | |
AAGCATCAACCTGATGTGGA+GGG | + | chr8_1:15522492-15522511 | None:intergenic | 45.0% | |
!! | CAAGAAGCATCAACCTGATG+TGG | + | chr8_1:15522496-15522515 | None:intergenic | 45.0% |
!! | CACATCAGGTTGATGCTTCT+TGG | - | chr8_1:15522494-15522513 | Msa1181210:intron | 45.0% |
AGGAGCAGAATAAGAGCTAG+AGG | + | chr8_1:15522578-15522597 | None:intergenic | 45.0% | |
CAAGGAAGGAGTTTCAACCA+TGG | + | chr8_1:15522682-15522701 | None:intergenic | 45.0% | |
! | CAGCTTTATCTCGACAAGGA+AGG | + | chr8_1:15522696-15522715 | None:intergenic | 45.0% |
CTTCCTTGTCGAGATAAAGC+TGG | - | chr8_1:15522694-15522713 | Msa1181210:intron | 45.0% | |
! | AGTCCAGCTTTATCTCGACA+AGG | + | chr8_1:15522700-15522719 | None:intergenic | 45.0% |
AGCTGGACTTTCAGCCTTAA+TGG | - | chr8_1:15522711-15522730 | Msa1181210:intron | 45.0% | |
! | CAGCCTGATTTTCAGAAAGC+TGG | - | chr8_1:15522856-15522875 | Msa1181210:intron | 45.0% |
ATTGAGCTCAAAGACCAGCT+TGG | + | chr8_1:15522913-15522932 | None:intergenic | 45.0% | |
AGTTCTCTATGAACCCTGTC+TGG | + | chr8_1:15523117-15523136 | None:intergenic | 45.0% | |
AGACAGGGTTCATAGAGAAC+TGG | - | chr8_1:15523116-15523135 | Msa1181210:intron | 45.0% | |
! | ATAGAAAGGTGCATGTGAGG+AGG | + | chr8_1:15523241-15523260 | None:intergenic | 45.0% |
! | TAATGGGCAGTGGAAACGAA+AGG | - | chr8_1:15523274-15523293 | Msa1181210:intron | 45.0% |
AATGGGCAGTGGAAACGAAA+GGG | - | chr8_1:15523275-15523294 | Msa1181210:intron | 45.0% | |
ATTGGCTGCTATGAAGTCCT+TGG | + | chr8_1:15523337-15523356 | None:intergenic | 45.0% | |
ATGTGCTGCAAATTGTGCCT+TGG | - | chr8_1:15523388-15523407 | Msa1181210:intron | 45.0% | |
ACAAAGTCTGTGACAGCTTG+AGG | + | chr8_1:15523462-15523481 | None:intergenic | 45.0% | |
! | CAAAGTATCACCAGGAGTGA+TGG | - | chr8_1:15523512-15523531 | Msa1181210:intron | 45.0% |
AGGTGAGCCTAAGATAAGTC+AGG | + | chr8_1:15523864-15523883 | None:intergenic | 45.0% | |
GACTTATCTTAGGCTCACCT+TGG | - | chr8_1:15523864-15523883 | Msa1181210:CDS | 45.0% | |
! | AGTTTGAGATGGGCTTCTTC+TGG | + | chr8_1:15523890-15523909 | None:intergenic | 45.0% |
GAAGAAGCCCATCTCAAACT+TGG | - | chr8_1:15523890-15523909 | Msa1181210:CDS | 45.0% | |
GCCCTTAAACCCATTTGGAT+TGG | - | chr8_1:15523929-15523948 | Msa1181210:CDS | 45.0% | |
! | GGCCAATCCAAATGGGTTTA+AGG | + | chr8_1:15523934-15523953 | None:intergenic | 45.0% |
!! | TAAACCCATTTGGATTGGCC+TGG | - | chr8_1:15523934-15523953 | Msa1181210:CDS | 45.0% |
ATTGAACCTGAGACCTTGAG+AGG | + | chr8_1:15523990-15524009 | None:intergenic | 45.0% | |
CCAAACAAACCCACCGAAAT+TGG | + | chr8_1:15524024-15524043 | None:intergenic | 45.0% | |
! | CCAATTTCGGTGGGTTTGTT+TGG | - | chr8_1:15524021-15524040 | Msa1181210:CDS | 45.0% |
! | TGTCTTGGCTTGAGCTTCTA+TGG | + | chr8_1:15524438-15524457 | None:intergenic | 45.0% |
TCTTCAATAGTCCACTCTGC+CGG | + | chr8_1:15524530-15524549 | None:intergenic | 45.0% | |
! | GAAAGGCACAAAGCACTTCA+TGG | + | chr8_1:15524608-15524627 | None:intergenic | 45.0% |
!! | TGTGCTGGCTACCTGTTAAT+TGG | - | chr8_1:15524794-15524813 | Msa1181210:CDS | 45.0% |
TCATCACATCCATGCTGCAA+TGG | + | chr8_1:15524849-15524868 | None:intergenic | 45.0% | |
ATACCCACCAGATGCTAATC+AGG | - | chr8_1:15525084-15525103 | Msa1181210:intron | 45.0% | |
TACCCACCAGATGCTAATCA+GGG | - | chr8_1:15525085-15525104 | Msa1181210:intron | 45.0% | |
ATCCCTGATTAGCATCTGGT+GGG | + | chr8_1:15525090-15525109 | None:intergenic | 45.0% | |
AATCCCTGATTAGCATCTGG+TGG | + | chr8_1:15525091-15525110 | None:intergenic | 45.0% | |
AGCTTTCCTGACTTTCATGC+TGG | - | chr8_1:15525133-15525152 | Msa1181210:intron | 45.0% | |
TGCAAACCAGCATGAAAGTC+AGG | + | chr8_1:15525142-15525161 | None:intergenic | 45.0% | |
AATGTACTCCGAAGACGAGT+TGG | - | chr8_1:15525427-15525446 | Msa1181210:intron | 45.0% | |
!! | ATGTTTTTGTGGGTGGGTGA+GGG | + | chr8_1:15525642-15525661 | None:intergenic | 45.0% |
!! | GTGAGGATGTTTTTGTGGGT+GGG | + | chr8_1:15525648-15525667 | None:intergenic | 45.0% |
TTGCCACACAACAGCAATTC+CGG | + | chr8_1:15526098-15526117 | None:intergenic | 45.0% | |
AATGCAAGTACAATGGGCAG+TGG | + | chr8_1:15526210-15526229 | None:intergenic | 45.0% | |
!! | AAAAAAAAAACAATAAAAAA+AGG | - | chr8_1:15520828-15520847 | Msa1181210:three_prime_UTR | 5.0% |
!!! | TTTTTTTTTTTTTTTTGTAA+TGG | - | chr8_1:15525697-15525716 | Msa1181210:intron | 5.0% |
ACAGTGACGTTCGTTCATGG+CGG | - | chr8_1:15520930-15520949 | Msa1181210:three_prime_UTR | 50.0% | |
TGGCGGAACTTCTGTAGCTT+TGG | - | chr8_1:15520947-15520966 | Msa1181210:three_prime_UTR | 50.0% | |
GAGAACTTTGCGATCGGGTA+AGG | + | chr8_1:15521143-15521162 | None:intergenic | 50.0% | |
ATGCGCGAGAACTTTGCGAT+CGG | + | chr8_1:15521149-15521168 | None:intergenic | 50.0% | |
CAGCAATAGGAGCTTCGGTT+TGG | + | chr8_1:15521180-15521199 | None:intergenic | 50.0% | |
CCCCAAATCCATTTCTCAGC+TGG | - | chr8_1:15521231-15521250 | Msa1181210:intron | 50.0% | |
GAGAAGCTAGTGCTTCTGCT+CGG | + | chr8_1:15521541-15521560 | None:intergenic | 50.0% | |
! | TAGCATCCGGTGCCAAGTAA+AGG | + | chr8_1:15522155-15522174 | None:intergenic | 50.0% |
! | GGCACCGGATGCTAATGTAA+TGG | - | chr8_1:15522161-15522180 | Msa1181210:intron | 50.0% |
AGCCAAAATGCAAAGCCTCC+TGG | - | chr8_1:15522439-15522458 | Msa1181210:intron | 50.0% | |
! | CTCCAGGAGGCTTTGCATTT+TGG | + | chr8_1:15522444-15522463 | None:intergenic | 50.0% |
CTTTGATGTCCCTCCACATC+AGG | - | chr8_1:15522480-15522499 | Msa1181210:intron | 50.0% | |
! | GAAGCATCAACCTGATGTGG+AGG | + | chr8_1:15522493-15522512 | None:intergenic | 50.0% |
GCTGACTGAGATGCCCATTT+AGG | + | chr8_1:15522598-15522617 | None:intergenic | 50.0% | |
CATCCAGAGTTCCTGCAGAT+GGG | - | chr8_1:15522788-15522807 | Msa1181210:intron | 50.0% | |
TAACCCATCTGCAGGAACTC+TGG | + | chr8_1:15522794-15522813 | None:intergenic | 50.0% | |
CCTGAATCTAACCCATCTGC+AGG | + | chr8_1:15522802-15522821 | None:intergenic | 50.0% | |
!! | CCTGCAGATGGGTTAGATTC+AGG | - | chr8_1:15522799-15522818 | Msa1181210:intron | 50.0% |
GTCTACCTTCAAGTGGAGAG+AGG | - | chr8_1:15522982-15523001 | Msa1181210:intron | 50.0% | |
CTAGACCTCTCTCCACTTGA+AGG | + | chr8_1:15522990-15523009 | None:intergenic | 50.0% | |
TGTGAGGAGGACCAAACAAC+TGG | + | chr8_1:15523228-15523247 | None:intergenic | 50.0% | |
! | GGCATAGAAAGGTGCATGTG+AGG | + | chr8_1:15523244-15523263 | None:intergenic | 50.0% |
ATGGGCAGTGGAAACGAAAG+GGG | - | chr8_1:15523276-15523295 | Msa1181210:intron | 50.0% | |
ACCACCAGGCCAATCCAAAT+GGG | + | chr8_1:15523941-15523960 | None:intergenic | 50.0% | |
! | CTTGAGAGGAGCACACTTCA+AGG | + | chr8_1:15523976-15523995 | None:intergenic | 50.0% |
CTTGAAGTGTGCTCCTCTCA+AGG | - | chr8_1:15523974-15523993 | Msa1181210:CDS | 50.0% | |
GTCTCAGGTTCAATTCTCCC+CGG | - | chr8_1:15523996-15524015 | Msa1181210:CDS | 50.0% | |
! | ATTCTCCCCGGTGCCAATTT+CGG | - | chr8_1:15524008-15524027 | Msa1181210:CDS | 50.0% |
AAACCCACCGAAATTGGCAC+CGG | + | chr8_1:15524018-15524037 | None:intergenic | 50.0% | |
CTTCAATAGTCCACTCTGCC+GGG | + | chr8_1:15524529-15524548 | None:intergenic | 50.0% | |
GAGTTTGTGTGAGCCTGACT+TGG | - | chr8_1:15524647-15524666 | Msa1181210:CDS | 50.0% | |
! | ATGTGCCGACACGATTGTGT+CGG | - | chr8_1:15524687-15524706 | Msa1181210:CDS | 50.0% |
!! | TGTTTTTGTGGGTGGGTGAG+GGG | + | chr8_1:15525641-15525660 | None:intergenic | 50.0% |
!! | GATGTTTTTGTGGGTGGGTG+AGG | + | chr8_1:15525643-15525662 | None:intergenic | 50.0% |
!! | GGTGAGGATGTTTTTGTGGG+TGG | + | chr8_1:15525649-15525668 | None:intergenic | 50.0% |
CTGTGGTTCTTGTGGTTGAG+TGG | + | chr8_1:15526020-15526039 | None:intergenic | 50.0% | |
! | AAGGATGATGACGACGACTG+TGG | + | chr8_1:15526037-15526056 | None:intergenic | 50.0% |
CGCACAGTGACGTTCGTTCA+TGG | - | chr8_1:15520927-15520946 | Msa1181210:three_prime_UTR | 55.0% | |
TGCGCGAGAACTTTGCGATC+GGG | + | chr8_1:15521148-15521167 | None:intergenic | 55.0% | |
! | GAGATGGTGATGACGAGCGA+AGG | + | chr8_1:15521209-15521228 | None:intergenic | 55.0% |
AGTGCTTCTGCTCGGCACAA+GGG | + | chr8_1:15521533-15521552 | None:intergenic | 55.0% | |
TAGTGCTTCTGCTCGGCACA+AGG | + | chr8_1:15521534-15521553 | None:intergenic | 55.0% | |
AGCCTCCTGGAGTTGAACTG+TGG | - | chr8_1:15522452-15522471 | Msa1181210:intron | 55.0% | |
GCCTCCTGGAGTTGAACTGT+GGG | - | chr8_1:15522453-15522472 | Msa1181210:intron | 55.0% | |
ACTGCCCACAGTTCAACTCC+AGG | + | chr8_1:15522460-15522479 | None:intergenic | 55.0% | |
TGGGCATCTCAGTCAGCCTT+AGG | - | chr8_1:15522601-15522620 | Msa1181210:intron | 55.0% | |
TCTGTGCAGACAGCTTCACG+CGG | + | chr8_1:15522649-15522668 | None:intergenic | 55.0% | |
CAGGAACTCTGGATGCTGTC+AGG | + | chr8_1:15522783-15522802 | None:intergenic | 55.0% | |
GCATCCAGAGTTCCTGCAGA+TGG | - | chr8_1:15522787-15522806 | Msa1181210:intron | 55.0% | |
! | ATCACCAGGAGTGATGGAGC+TGG | - | chr8_1:15523518-15523537 | Msa1181210:intron | 55.0% |
! | AGATGGGCTTCTTCTGGCCA+AGG | + | chr8_1:15523884-15523903 | None:intergenic | 55.0% |
!! | ACCCATTTGGATTGGCCTGG+TGG | - | chr8_1:15523937-15523956 | Msa1181210:CDS | 55.0% |
CACCACCAGGCCAATCCAAA+TGG | + | chr8_1:15523942-15523961 | None:intergenic | 55.0% | |
!! | TTGGATTGGCCTGGTGGTGT+TGG | - | chr8_1:15523943-15523962 | Msa1181210:CDS | 55.0% |
TGTGCTCCTCTCAAGGTCTC+AGG | - | chr8_1:15523981-15524000 | Msa1181210:CDS | 55.0% | |
AACCCACCGAAATTGGCACC+GGG | + | chr8_1:15524017-15524036 | None:intergenic | 55.0% | |
!! | ACTCTGCCGGGCTGGTTTAA+AGG | + | chr8_1:15524517-15524536 | None:intergenic | 55.0% |
TTTAAACCAGCCCGGCAGAG+TGG | - | chr8_1:15524516-15524535 | Msa1181210:CDS | 55.0% | |
! | GACACAATCGTGTCGGCACA+TGG | + | chr8_1:15524688-15524707 | None:intergenic | 55.0% |
!! | CAGCACCGACACAATCGTGT+CGG | + | chr8_1:15524695-15524714 | None:intergenic | 55.0% |
! | ACTCCGAAGACGAGTTGGAG+AGG | - | chr8_1:15525432-15525451 | Msa1181210:intron | 55.0% |
CCTCCTCTCCAACTCGTCTT+CGG | + | chr8_1:15525438-15525457 | None:intergenic | 55.0% | |
GACGACGACTGTGGTTCTTG+TGG | + | chr8_1:15526028-15526047 | None:intergenic | 55.0% | |
! | TGGCCGGAATTGCTGTTGTG+TGG | - | chr8_1:15526092-15526111 | Msa1181210:CDS | 55.0% |
GTCACTGTGCGAGCGAGCTT+CGG | + | chr8_1:15520918-15520937 | None:intergenic | 60.0% | |
! | GGTGTCGAACCCGAGAGTCT+AGG | + | chr8_1:15521512-15521531 | None:intergenic | 60.0% |
GCCCACAGTTCAACTCCAGG+AGG | + | chr8_1:15522457-15522476 | None:intergenic | 60.0% | |
AGGACCAGCTCCATCACTCC+TGG | + | chr8_1:15523525-15523544 | None:intergenic | 60.0% | |
!! | TTGGCCTGGTGGTGTTGGCT+TGG | - | chr8_1:15523948-15523967 | Msa1181210:CDS | 60.0% |
!! | TGGCCTGGTGGTGTTGGCTT+GGG | - | chr8_1:15523949-15523968 | Msa1181210:CDS | 60.0% |
! | TCCCCGGTGCCAATTTCGGT+GGG | - | chr8_1:15524012-15524031 | Msa1181210:CDS | 60.0% |
ACCCACCGAAATTGGCACCG+GGG | + | chr8_1:15524016-15524035 | None:intergenic | 60.0% | |
AATAGTCCACTCTGCCGGGC+TGG | + | chr8_1:15524525-15524544 | None:intergenic | 60.0% | |
! | CGACACGATTGTGTCGGTGC+TGG | - | chr8_1:15524693-15524712 | Msa1181210:CDS | 60.0% |
! | CCGAAGACGAGTTGGAGAGG+AGG | - | chr8_1:15525435-15525454 | Msa1181210:intron | 60.0% |
GGACCCAAGCCAACACCACC+AGG | + | chr8_1:15523955-15523974 | None:intergenic | 65.0% | |
! | CTCCCCGGTGCCAATTTCGG+TGG | - | chr8_1:15524011-15524030 | Msa1181210:CDS | 65.0% |
GGGTGGGTGAGGGGAAGTTG+CGG | + | chr8_1:15525632-15525651 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 15520828 | 15526347 | 15520828 | ID=Msa1181210;Name=Msa1181210 |
chr8_1 | mRNA | 15520828 | 15526347 | 15520828 | ID=Msa1181210-mRNA-1;Parent=Msa1181210;Name=Msa1181210-mRNA-1;_AED=0.25;_eAED=0.25;_QI=41|1|1|1|1|1|5|215|712 |
chr8_1 | exon | 15520828 | 15521221 | 15520828 | ID=Msa1181210-mRNA-1:exon:5861;Parent=Msa1181210-mRNA-1 |
chr8_1 | exon | 15521697 | 15521877 | 15521697 | ID=Msa1181210-mRNA-1:exon:5860;Parent=Msa1181210-mRNA-1 |
chr8_1 | exon | 15521965 | 15522111 | 15521965 | ID=Msa1181210-mRNA-1:exon:5859;Parent=Msa1181210-mRNA-1 |
chr8_1 | exon | 15523579 | 15524826 | 15523579 | ID=Msa1181210-mRNA-1:exon:5858;Parent=Msa1181210-mRNA-1 |
chr8_1 | exon | 15525923 | 15526347 | 15525923 | ID=Msa1181210-mRNA-1:exon:5857;Parent=Msa1181210-mRNA-1 |
chr8_1 | five_prime_UTR | 15526307 | 15526347 | 15526307 | ID=Msa1181210-mRNA-1:five_prime_utr;Parent=Msa1181210-mRNA-1 |
chr8_1 | CDS | 15525923 | 15526306 | 15525923 | ID=Msa1181210-mRNA-1:cds;Parent=Msa1181210-mRNA-1 |
chr8_1 | CDS | 15523579 | 15524826 | 15523579 | ID=Msa1181210-mRNA-1:cds;Parent=Msa1181210-mRNA-1 |
chr8_1 | CDS | 15521965 | 15522111 | 15521965 | ID=Msa1181210-mRNA-1:cds;Parent=Msa1181210-mRNA-1 |
chr8_1 | CDS | 15521697 | 15521877 | 15521697 | ID=Msa1181210-mRNA-1:cds;Parent=Msa1181210-mRNA-1 |
chr8_1 | CDS | 15521043 | 15521221 | 15521043 | ID=Msa1181210-mRNA-1:cds;Parent=Msa1181210-mRNA-1 |
chr8_1 | three_prime_UTR | 15520828 | 15521042 | 15520828 | ID=Msa1181210-mRNA-1:three_prime_utr;Parent=Msa1181210-mRNA-1 |
Gene Sequence |
Protein sequence |