AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0291320


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0291320 MtrunA17_Chr7g0253751 52.500 80 34 1 11 90 24 99 7.15e-22 86.3
Msa0291320 MtrunA17_Chr7g0253751 58.065 62 26 0 108 169 38 99 5.65e-20 81.6
Msa0291320 MtrunA17_Chr3g0142071 55.556 63 28 0 27 89 45 107 3.83e-17 78.6
Msa0291320 MtrunA17_Chr3g0142071 55.556 63 28 0 106 168 45 107 3.83e-17 78.6
Msa0291320 MtrunA17_Chr2g0311391 54.688 64 29 0 33 96 37 100 2.13e-15 73.6
Msa0291320 MtrunA17_Chr2g0311391 53.125 64 30 0 112 175 37 100 2.31e-14 70.5
Msa0291320 MtrunA17_Chr2g0311471 49.206 63 32 0 112 174 37 99 9.11e-13 65.9
Msa0291320 MtrunA17_Chr2g0311471 49.206 63 32 0 33 95 37 99 9.56e-13 65.9
Msa0291320 MtrunA17_Chr2g0311091 48.438 64 33 0 112 175 35 98 1.09e-12 63.5
Msa0291320 MtrunA17_Chr2g0311091 48.438 64 33 0 33 96 35 98 1.27e-12 63.5
Msa0291320 MtrunA17_Chr2g0311381 48.438 64 33 0 111 174 36 99 1.73e-12 65.1
Msa0291320 MtrunA17_Chr2g0311381 48.438 64 33 0 32 95 36 99 2.14e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0291320 AT1G09850.1 45.833 72 38 1 27 97 27 98 9.94e-15 72.0
Msa0291320 AT1G09850.1 45.455 66 36 0 106 171 27 92 1.25e-14 71.6
Msa0291320 AT4G35350.1 51.515 66 31 1 28 93 47 111 9.54e-12 63.2
Msa0291320 AT4G35350.1 51.515 66 31 1 107 172 47 111 9.54e-12 63.2
Msa0291320 AT4G35350.2 51.515 66 31 1 28 93 47 111 9.56e-12 62.8
Msa0291320 AT4G35350.2 51.515 66 31 1 107 172 47 111 9.56e-12 62.8
Msa0291320 AT3G43960.1 41.176 68 40 0 26 93 35 102 9.72e-11 60.5
Msa0291320 AT3G43960.1 41.176 68 40 0 105 172 35 102 9.72e-11 60.5

Find 55 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAATGGAACAACGATAAT+TGG 0.192122 2_3:+39590825 None:intergenic
ATCAATGGAACAACCATAAT+TGG 0.195557 2_3:+39596075 None:intergenic
TTGGTTGTGTTGAGTGATTC+TGG 0.214560 2_3:+39590915 None:intergenic
TTGGTTGTGTTGAGTGATTC+TGG 0.214560 2_3:+39596165 None:intergenic
TGATCAGTTTATGAAATAAA+AGG 0.223384 2_3:+39596559 None:intergenic
TTTGATTATATTAAAACTAT+TGG 0.232195 2_3:-39590656 Msa0291320:three_prime_UTR
TCCATCTTAATATCAATAAA+TGG 0.249277 2_3:-39590570 Msa0291320:three_prime_UTR
GAGGAATTTACGTCCAATTA+TGG 0.252320 2_3:-39596088 Msa0291320:CDS
TAAGATGGAAGTTCAAGATT+TGG 0.319820 2_3:+39590584 None:intergenic
TTGATTATATTAAAACTATT+GGG 0.332489 2_3:-39590655 Msa0291320:three_prime_UTR
AACGTTGTGTCTTTATTCAA+TGG 0.348889 2_3:-39596464 Msa0291320:exon
AAACTTCATTGATGTTTGAC+TGG 0.385671 2_3:+39590757 None:intergenic
TTCTTGAAGCTTGGAGTTGG+AGG 0.392872 2_3:+39596423 None:intergenic
TGAGTAATTCAACTCGTAGA+TGG 0.395615 2_3:+39596507 None:intergenic
GTAGCTTCAAAATTTGTCAT+AGG 0.399302 2_3:-39596535 Msa0291320:five_prime_UTR
AGAATAACAAACCGATGGTT+GGG 0.404177 2_3:+39596390 None:intergenic
CTGTTCTTGAAGCTTGGAGT+TGG 0.411197 2_3:+39596420 None:intergenic
CCGGATGATCTTGAAAAGTT+AGG 0.423858 2_3:-39590787 Msa0291320:CDS
TCCATGAAATATTTGAAAAG+TGG 0.434083 2_3:-39591014 Msa0291320:CDS
TCCATGAAATATTTGAAAAG+TGG 0.434083 2_3:-39596264 Msa0291320:CDS
AGGAATCTGTTCTTGAAGCT+TGG 0.443942 2_3:+39596414 None:intergenic
ACCATTTATTGATATTAAGA+TGG 0.454456 2_3:+39590569 None:intergenic
ATTAAAACTATTGGGCTAAG+AGG 0.456850 2_3:-39590647 Msa0291320:three_prime_UTR
CAACTATTAACACTTCATCT+TGG 0.461354 2_3:+39590609 None:intergenic
GATCAGTTTATGAAATAAAA+GGG 0.463851 2_3:+39596560 None:intergenic
TGAATATAAGGCTCCTGGTT+CGG 0.465353 2_3:-39591040 Msa0291320:intron
TGAATATAAGGCTCCTGGTT+CGG 0.465353 2_3:-39596290 Msa0291320:intron
AATTGTGAATATAAGGCTCC+TGG 0.479700 2_3:-39591045 Msa0291320:intron
AATTGTGAATATAAGGCTCC+TGG 0.479700 2_3:-39596295 Msa0291320:intron
CGAAGGTGAGATCAGAGAAC+TGG 0.488939 2_3:+39590860 None:intergenic
CGAAGGTGAGATCAGAGAAC+TGG 0.488939 2_3:+39596110 None:intergenic
TGATTTCAACGATGTCCATC+CGG 0.494998 2_3:-39590806 Msa0291320:CDS
TAGAATAACAAACCGATGGT+TGG 0.501861 2_3:+39596389 None:intergenic
GTTCTCTGATCTCACCTTCG+AGG 0.507841 2_3:-39590857 Msa0291320:CDS
GTTCTCTGATCTCACCTTCG+AGG 0.507841 2_3:-39596107 Msa0291320:CDS
ATGGACATCGTTGAAATCAA+TGG 0.510440 2_3:+39590810 None:intergenic
ATGGACATCGTTGAAATCAA+TGG 0.510440 2_3:+39596060 None:intergenic
CGACAAAACATATTCTTCAA+AGG 0.513620 2_3:-39590980 Msa0291320:CDS
CGACAAAACATATTCTTCAA+AGG 0.513620 2_3:-39596230 Msa0291320:CDS
ATATAATCAAAGGTGGTGAC+AGG 0.523055 2_3:+39590668 None:intergenic
AACTTCATTGATGTTTGACT+GGG 0.536300 2_3:+39590758 None:intergenic
GAATAACAAACCGATGGTTG+GGG 0.564507 2_3:+39596391 None:intergenic
AAAACTATTGGGCTAAGAGG+AGG 0.564725 2_3:-39590644 Msa0291320:three_prime_UTR
ACAGATTCCTCCCCAACCAT+CGG 0.584110 2_3:-39596401 Msa0291320:intron
ATTTCATGGATGTCCGAACC+AGG 0.584248 2_3:+39591027 None:intergenic
ATTTCATGGATGTCCGAACC+AGG 0.584248 2_3:+39596277 None:intergenic
AAACTATTGGGCTAAGAGGA+GGG 0.592370 2_3:-39590643 Msa0291320:three_prime_UTR
TGAGATCAGAGAACTGGTTG+AGG 0.597092 2_3:+39590866 None:intergenic
TGAGATCAGAGAACTGGTTG+AGG 0.597092 2_3:+39596116 None:intergenic
AATATTTGAAAAGTGGTGCA+AGG 0.602264 2_3:-39591007 Msa0291320:CDS
AATATTTGAAAAGTGGTGCA+AGG 0.602264 2_3:-39596257 Msa0291320:CDS
TAACAAACCGATGGTTGGGG+AGG 0.622332 2_3:+39596394 None:intergenic
ATTGAATAAAGACACAACGT+TGG 0.632259 2_3:+39596466 None:intergenic
ATTGGACGTAAATTCCTCGA+AGG 0.638330 2_3:+39590843 None:intergenic
ATTGGACGTAAATTCCTCGA+AGG 0.638330 2_3:+39596093 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTAATTGTGAATATA+AGG - chr2_3:39590768-39590787 Msa0291320:CDS 10.0%
!!! AATAGTTTTAATATAATCAA+AGG + chr2_3:39591159-39591178 None:intergenic 10.0%
!! TTTGATTATATTAAAACTAT+TGG - chr2_3:39591158-39591177 Msa0291320:intron 10.0%
!! TTGATTATATTAAAACTATT+GGG - chr2_3:39591159-39591178 Msa0291320:intron 10.0%
!!! AAATTGATCTATTTTTTATT+AGG - chr2_3:39591468-39591487 Msa0291320:intron 10.0%
!! AAGAGAAAATTAAAATTTAT+TGG + chr2_3:39591863-39591882 None:intergenic 10.0%
!! ACTAAAATAAAAAAAAAAGT+GGG + chr2_3:39593105-39593124 None:intergenic 10.0%
!! AACTAAAATAAAAAAAAAAG+TGG + chr2_3:39593106-39593125 None:intergenic 10.0%
!!! TTGTTTCATATTTTATAATA+GGG - chr2_3:39593546-39593565 Msa0291320:intron 10.0%
!! AAGAATTAAATTTAAACATT+TGG + chr2_3:39595394-39595413 None:intergenic 10.0%
!!! CTTTTGAATTTTTATATAAA+TGG - chr2_3:39595732-39595751 Msa0291320:intron 10.0%
!!! TAATTTTAATTGTGAATATA+AGG - chr2_3:39590768-39590787 Msa0291320:CDS 10.0%
!!! AATAGTTTTAATATAATCAA+AGG + chr2_3:39591159-39591178 None:intergenic 10.0%
!! TTTGATTATATTAAAACTAT+TGG - chr2_3:39591158-39591177 Msa0291320:intron 10.0%
!! TTGATTATATTAAAACTATT+GGG - chr2_3:39591159-39591178 Msa0291320:intron 10.0%
!! ATCGTTCATTAATATTAAAA+TGG - chr2_3:39591723-39591742 Msa0291320:intron 15.0%
!! TTCATTAATATTAAAATGGA+AGG - chr2_3:39591727-39591746 Msa0291320:intron 15.0%
!!! ATAAAAAAAAGTTTTAGACT+TGG - chr2_3:39592985-39593004 Msa0291320:intron 15.0%
!!! TTTTACTGTTACAAAATTAA+TGG + chr2_3:39593328-39593347 None:intergenic 15.0%
!!! TTTAAAAATACCTCATTTTT+TGG - chr2_3:39593464-39593483 Msa0291320:intron 15.0%
!!! GTTGTTTCATATTTTATAAT+AGG - chr2_3:39593545-39593564 Msa0291320:intron 15.0%
!!! TGTTTCATATTTTATAATAG+GGG - chr2_3:39593547-39593566 Msa0291320:intron 15.0%
!!! AAATAAAAGTACAAGAAATT+GGG + chr2_3:39594536-39594555 None:intergenic 15.0%
!!! AAAATAAAAGTACAAGAAAT+TGG + chr2_3:39594537-39594556 None:intergenic 15.0%
!! TAAAAAAATAAAAAGATGAC+AGG - chr2_3:39594581-39594600 Msa0291320:intron 15.0%
!! TTAAAAAAGATTCTATCAAT+TGG - chr2_3:39594908-39594927 Msa0291320:intron 15.0%
!! AAGAAGTAAACTTAAAAATT+TGG + chr2_3:39595086-39595105 None:intergenic 15.0%
!!! TACCTATGAATTTTTATTTA+TGG - chr2_3:39595118-39595137 Msa0291320:intron 15.0%
!! AACCATAAATAAAAATTCAT+AGG + chr2_3:39595123-39595142 None:intergenic 15.0%
!!! AATTAATCAATTTGATAGTT+AGG - chr2_3:39595328-39595347 Msa0291320:intron 15.0%
!! AAATTTAAACATTTAGTCAA+AGG + chr2_3:39595431-39595450 None:intergenic 15.0%
!!! TCAACTAAGTTTTTTTTTTT+TGG - chr2_3:39595528-39595547 Msa0291320:intron 15.0%
!!! AGTTTTAATATAATCAAAGG+TGG + chr2_3:39591156-39591175 None:intergenic 20.0%
!! TCCATCTTAATATCAATAAA+TGG - chr2_3:39591244-39591263 Msa0291320:intron 20.0%
!! ACCATTTATTGATATTAAGA+TGG + chr2_3:39591248-39591267 None:intergenic 20.0%
!! AAAACTAAAACTAATGCAAT+TGG + chr2_3:39591438-39591457 None:intergenic 20.0%
!! GATTAATTAGTAGTATGATT+GGG + chr2_3:39591812-39591831 None:intergenic 20.0%
!! TGATTAATTAGTAGTATGAT+TGG + chr2_3:39591813-39591832 None:intergenic 20.0%
!!! TGAATAAGCATTTTTTTTGT+TGG - chr2_3:39591975-39591994 Msa0291320:intron 20.0%
!!! TTTTATGCATATAGATATCA+AGG - chr2_3:39592029-39592048 Msa0291320:intron 20.0%
!!! CTTTTAAACTCTAATCTTTT+CGG + chr2_3:39592445-39592464 None:intergenic 20.0%
!!! TTTAGATTATAAAAGTGTCT+AGG - chr2_3:39592488-39592507 Msa0291320:intron 20.0%
!! TTAACATAAGATGAAAATGT+AGG + chr2_3:39592558-39592577 None:intergenic 20.0%
!! AGAAACTTGTATTTAGAAAA+TGG + chr2_3:39592583-39592602 None:intergenic 20.0%
!!! CAATAAAAAGTATTTAACGA+TGG + chr2_3:39592925-39592944 None:intergenic 20.0%
!! AAATAAAAGACTGAATAGAA+AGG + chr2_3:39593190-39593209 None:intergenic 20.0%
!!! ATTTTAATTTCAAAAGTCCA+AGG - chr2_3:39593230-39593249 Msa0291320:intron 20.0%
!! AATAATTGAGAAAATTGACA+TGG + chr2_3:39593281-39593300 None:intergenic 20.0%
!! TCAATTATTGCTCATTTATA+AGG - chr2_3:39593292-39593311 Msa0291320:intron 20.0%
!!! AATAAAAGTACAAGAAATTG+GGG + chr2_3:39594535-39594554 None:intergenic 20.0%
!!! TTTTAAGAGAATTAATTTCG+AGG + chr2_3:39594894-39594913 None:intergenic 20.0%
!!! GAAAAACTATATTTTCTTAG+GGG + chr2_3:39595250-39595269 None:intergenic 20.0%
!!! GGAAAAACTATATTTTCTTA+GGG + chr2_3:39595251-39595270 None:intergenic 20.0%
!!! AGGAAAAACTATATTTTCTT+AGG + chr2_3:39595252-39595271 None:intergenic 20.0%
!! AAAATATTATATTCCTTCGA+AGG + chr2_3:39595272-39595291 None:intergenic 20.0%
!! TACTTCATCAGTTAATAAAA+GGG + chr2_3:39595768-39595787 None:intergenic 20.0%
!!! AGTTTTAATATAATCAAAGG+TGG + chr2_3:39591156-39591175 None:intergenic 20.0%
!! TCCATCTTAATATCAATAAA+TGG - chr2_3:39591244-39591263 Msa0291320:intron 20.0%
!! ACCATTTATTGATATTAAGA+TGG + chr2_3:39591248-39591267 None:intergenic 20.0%
! AAATCATGAGAGAAATTGAA+GGG + chr2_3:39590708-39590727 None:intergenic 25.0%
! AAAATCATGAGAGAAATTGA+AGG + chr2_3:39590709-39590728 None:intergenic 25.0%
! TCCATGAAATATTTGAAAAG+TGG - chr2_3:39590806-39590825 Msa0291320:CDS 25.0%
!!! ACCACTTTTCAAATATTTCA+TGG + chr2_3:39590810-39590829 None:intergenic 25.0%
! ACAAAAAACACCACAATTAT+TGG + chr2_3:39591092-39591111 None:intergenic 25.0%
!!! TTTTTGTTGTTGTTGCTTAT+AGG - chr2_3:39591112-39591131 Msa0291320:intron 25.0%
! AGTATTTACCAAGAACATAT+GGG + chr2_3:39591520-39591539 None:intergenic 25.0%
! TAGTATTTACCAAGAACATA+TGG + chr2_3:39591521-39591540 None:intergenic 25.0%
!! AAGAATTGATGATCAAACTA+TGG - chr2_3:39591552-39591571 Msa0291320:intron 25.0%
! AGAGAAATTAGAAGGTAATT+AGG + chr2_3:39591580-39591599 None:intergenic 25.0%
! TATTAATAGCTGTTATTGTG+AGG + chr2_3:39591693-39591712 None:intergenic 25.0%
! TAAAATGGAAGGACAATATT+TGG - chr2_3:39591738-39591757 Msa0291320:intron 25.0%
! TAACTATAAACTCTTACTGT+TGG - chr2_3:39591763-39591782 Msa0291320:intron 25.0%
! AAACTTGAAAGATCCTAATT+TGG - chr2_3:39591889-39591908 Msa0291320:intron 25.0%
!! GATTATCTTTTGATCTTTTC+AGG - chr2_3:39592054-39592073 Msa0291320:intron 25.0%
!! TTTTTGTAAACTCTACTCAA+AGG + chr2_3:39592283-39592302 None:intergenic 25.0%
! TAAAAAGATTATCTTCCACA+GGG - chr2_3:39592378-39592397 Msa0291320:intron 25.0%
! TTAAAAGTTCGATAGTTTCT+TGG - chr2_3:39592458-39592477 Msa0291320:intron 25.0%
!! AAAGTGTCTAGGAATATTAT+TGG - chr2_3:39592499-39592518 Msa0291320:intron 25.0%
! ACTTCACAAAACTATTCATT+TGG - chr2_3:39592719-39592738 Msa0291320:intron 25.0%
! CTTCACAAAACTATTCATTT+GGG - chr2_3:39592720-39592739 Msa0291320:intron 25.0%
! TTCACAAAACTATTCATTTG+GGG - chr2_3:39592721-39592740 Msa0291320:intron 25.0%
! TCATCTCAAATATCAAATGA+TGG + chr2_3:39592816-39592835 None:intergenic 25.0%
! TCATCTCAAATATCAAATGA+TGG + chr2_3:39592816-39592835 None:intergenic 25.0%
!!! AATATGAGTTTTAGATCCAA+TGG + chr2_3:39593360-39593379 None:intergenic 25.0%
!! TTGGATCTAAAACTCATATT+TGG - chr2_3:39593360-39593379 Msa0291320:intron 25.0%
!! GAAATGATAGCTCTATTTAT+AGG + chr2_3:39593393-39593412 None:intergenic 25.0%
! CACACACAAAAAATTCTATT+CGG - chr2_3:39593422-39593441 Msa0291320:intron 25.0%
!! CAAAAAATTCTATTCGGTTT+TGG - chr2_3:39593428-39593447 Msa0291320:intron 25.0%
!!! GTATTTTTAAATACCTCTCA+GGG + chr2_3:39593455-39593474 None:intergenic 25.0%
! ATGATCTAGTGTTTGTTTAA+TGG + chr2_3:39593675-39593694 None:intergenic 25.0%
! AAAAAATCAGTCTTCGATAT+AGG - chr2_3:39593954-39593973 Msa0291320:intron 25.0%
!!! TGGTTTTAATAGAACAAATC+TGG + chr2_3:39593996-39594015 None:intergenic 25.0%
!!! CTTGTTGTTTTTTGCTTTAA+GGG - chr2_3:39594466-39594485 Msa0291320:intron 25.0%
!!! ACACTTTTTTTGATATCACT+AGG - chr2_3:39594497-39594516 Msa0291320:intron 25.0%
! CTTGAATTAAGGTAAAAAGT+TGG + chr2_3:39595018-39595037 None:intergenic 25.0%
!! CAACTTTTTACCTTAATTCA+AGG - chr2_3:39595016-39595035 Msa0291320:intron 25.0%
!! AAATATAGTTTTTCCTTCGA+AGG - chr2_3:39595256-39595275 Msa0291320:intron 25.0%
! TTAAACATTTAGTCAAAGGT+AGG + chr2_3:39595427-39595446 None:intergenic 25.0%
! ATATTGCATATTATATGCAG+GGG + chr2_3:39595627-39595646 None:intergenic 25.0%
! GATATTGCATATTATATGCA+GGG + chr2_3:39595628-39595647 None:intergenic 25.0%
! CTACTTCATCAGTTAATAAA+AGG + chr2_3:39595769-39595788 None:intergenic 25.0%
! AAATCATGAGAGAAATTGAA+GGG + chr2_3:39590708-39590727 None:intergenic 25.0%
! AAAATCATGAGAGAAATTGA+AGG + chr2_3:39590709-39590728 None:intergenic 25.0%
! TCCATGAAATATTTGAAAAG+TGG - chr2_3:39590806-39590825 Msa0291320:CDS 25.0%
!!! ACCACTTTTCAAATATTTCA+TGG + chr2_3:39590810-39590829 None:intergenic 25.0%
! ACAAAAAACACCACAATTAT+TGG + chr2_3:39591092-39591111 None:intergenic 25.0%
GTAGCTTCAAAATTTGTCAT+AGG - chr2_3:39590535-39590554 Msa0291320:three_prime_UTR 30.0%
ATTGAATAAAGACACAACGT+TGG + chr2_3:39590607-39590626 None:intergenic 30.0%
AACGTTGTGTCTTTATTCAA+TGG - chr2_3:39590606-39590625 Msa0291320:three_prime_UTR 30.0%
AATATTTGAAAAGTGGTGCA+AGG - chr2_3:39590813-39590832 Msa0291320:CDS 30.0%
CGACAAAACATATTCTTCAA+AGG - chr2_3:39590840-39590859 Msa0291320:CDS 30.0%
!! TGTAACCAGAATTTTTCAGT+TGG + chr2_3:39590927-39590946 None:intergenic 30.0%
! AAAAATTCTGGTTACACTCT+AGG - chr2_3:39590931-39590950 Msa0291320:CDS 30.0%
ATCAATGGAACAACCATAAT+TGG + chr2_3:39590998-39591017 None:intergenic 30.0%
AACTTCATTGATGTTTGACT+GGG + chr2_3:39591065-39591084 None:intergenic 30.0%
AAACTTCATTGATGTTTGAC+TGG + chr2_3:39591066-39591085 None:intergenic 30.0%
!! GAAGTTTTGTCCAATAATTG+TGG - chr2_3:39591079-39591098 Msa0291320:intron 30.0%
ATTAAAACTATTGGGCTAAG+AGG - chr2_3:39591167-39591186 Msa0291320:intron 30.0%
CAACTATTAACACTTCATCT+TGG + chr2_3:39591208-39591227 None:intergenic 30.0%
TAAGATGGAAGTTCAAGATT+TGG + chr2_3:39591233-39591252 None:intergenic 30.0%
TCGCAAAACAATTTGGAAAA+TGG + chr2_3:39591608-39591627 None:intergenic 30.0%
AACACAGTAATCCTCATAAA+AGG + chr2_3:39591635-39591654 None:intergenic 30.0%
ATTGTTGTAGGTACCAAATT+AGG + chr2_3:39591905-39591924 None:intergenic 30.0%
AGAGATTGTGATATTGTTGT+AGG + chr2_3:39591917-39591936 None:intergenic 30.0%
TATGCATATAGATATCAAGG+AGG - chr2_3:39592032-39592051 Msa0291320:intron 30.0%
!! TAGAAGTTTTTATTTCCGAC+TGG + chr2_3:39592089-39592108 None:intergenic 30.0%
!! TATCTGAAAGAGTGTTGTTA+GGG + chr2_3:39592204-39592223 None:intergenic 30.0%
!! ATATCTGAAAGAGTGTTGTT+AGG + chr2_3:39592205-39592224 None:intergenic 30.0%
GTAAAAAGATTATCTTCCAC+AGG - chr2_3:39592377-39592396 Msa0291320:intron 30.0%
ATAAGATGAAAATGTAGGCT+TGG + chr2_3:39592553-39592572 None:intergenic 30.0%
ATACGTTCATGTATTCTGAA+AGG + chr2_3:39592624-39592643 None:intergenic 30.0%
AATAGTCAAACCTATTCTCA+TGG - chr2_3:39592650-39592669 Msa0291320:intron 30.0%
TGATAATCAACCATGAGAAT+AGG + chr2_3:39592663-39592682 None:intergenic 30.0%
!!! AATAGTTTTGTGAAGTCTTG+AGG + chr2_3:39592715-39592734 None:intergenic 30.0%
AAGACAACACAAAACTTGAT+GGG + chr2_3:39592751-39592770 None:intergenic 30.0%
CGAAAGATGAAGTTTGATAT+TGG + chr2_3:39592791-39592810 None:intergenic 30.0%
!! AAAAGTATTTAACGATGGAC+TGG + chr2_3:39592920-39592939 None:intergenic 30.0%
TATTGCTCATTTATAAGGTG+AGG - chr2_3:39593297-39593316 Msa0291320:intron 30.0%
AGTAAAATGATCTTAGCCAT+TGG - chr2_3:39593341-39593360 Msa0291320:intron 30.0%
!! GGTATTTTTAAATACCTCTC+AGG + chr2_3:39593456-39593475 None:intergenic 30.0%
TTCTTAGAGACCAAAAAATG+AGG + chr2_3:39593477-39593496 None:intergenic 30.0%
ATCTAGTGTTTGTTTAATGG+TGG + chr2_3:39593672-39593691 None:intergenic 30.0%
!!! GTACTTGGTAGGATATTTTT+TGG - chr2_3:39593806-39593825 Msa0291320:intron 30.0%
TTCATCAAAGATCTGTTTGT+TGG - chr2_3:39593855-39593874 Msa0291320:intron 30.0%
!! TTTATGTCCCAGTTTTGATA+CGG - chr2_3:39594251-39594270 Msa0291320:intron 30.0%
GAATGCTCTATTCAATGATA+CGG - chr2_3:39594276-39594295 Msa0291320:intron 30.0%
AATGCTCTATTCAATGATAC+GGG - chr2_3:39594277-39594296 Msa0291320:intron 30.0%
!! ACCACTTTTCTTTTGCAATT+TGG - chr2_3:39594315-39594334 Msa0291320:intron 30.0%
ACCAAATTGCAAAAGAAAAG+TGG + chr2_3:39594319-39594338 None:intergenic 30.0%
!!! TTTTTTGTTGTTTACCCGTT+AGG - chr2_3:39594417-39594436 Msa0291320:intron 30.0%
!!! TTTTTGTTGTTTACCCGTTA+GGG - chr2_3:39594418-39594437 Msa0291320:intron 30.0%
! TTTTTATAACCATCCCTAAC+GGG + chr2_3:39594434-39594453 None:intergenic 30.0%
! CTTTTTATAACCATCCCTAA+CGG + chr2_3:39594435-39594454 None:intergenic 30.0%
!!! GCTTGTTGTTTTTTGCTTTA+AGG - chr2_3:39594465-39594484 Msa0291320:intron 30.0%
AGTAGCACTATCTTTATATG+AGG - chr2_3:39594675-39594694 Msa0291320:intron 30.0%
ATGTGAATAGATAGTTGACA+AGG - chr2_3:39594952-39594971 Msa0291320:intron 30.0%
GTCAATGTAACCTTGAATTA+AGG + chr2_3:39595029-39595048 None:intergenic 30.0%
ACATGAATACTTCTCAACTA+AGG - chr2_3:39595200-39595219 Msa0291320:intron 30.0%
AAGCTCACACAATTAAATTG+TGG - chr2_3:39595570-39595589 Msa0291320:intron 30.0%
GGATATTGCATATTATATGC+AGG + chr2_3:39595629-39595648 None:intergenic 30.0%
GTAGCTTCAAAATTTCTCAT+AGG - chr2_3:39595785-39595804 Msa0291320:intron 30.0%
TGAGTAATTCAACTCGTAAA+TGG + chr2_3:39595816-39595835 None:intergenic 30.0%
AATATTTGAAAAGTGGTGCA+AGG - chr2_3:39590813-39590832 Msa0291320:CDS 30.0%
CGACAAAACATATTCTTCAA+AGG - chr2_3:39590840-39590859 Msa0291320:CDS 30.0%
!! TGTAACCAGAATTTTTCAGT+TGG + chr2_3:39590927-39590946 None:intergenic 30.0%
! AAAAATTCTGGTTACACTCT+AGG - chr2_3:39590931-39590950 Msa0291320:CDS 30.0%
ATCAATGGAACAACGATAAT+TGG + chr2_3:39596248-39596267 None:intergenic 30.0%
AACTTCATTGATGTTTGACT+GGG + chr2_3:39591065-39591084 None:intergenic 30.0%
AAACTTCATTGATGTTTGAC+TGG + chr2_3:39591066-39591085 None:intergenic 30.0%
!! GAAGTTTTGTCCAATAATTG+TGG - chr2_3:39591079-39591098 Msa0291320:intron 30.0%
ATTAAAACTATTGGGCTAAG+AGG - chr2_3:39591167-39591186 Msa0291320:intron 30.0%
CAACTATTAACACTTCATCT+TGG + chr2_3:39591208-39591227 None:intergenic 30.0%
TAAGATGGAAGTTCAAGATT+TGG + chr2_3:39591233-39591252 None:intergenic 30.0%
TGAGTAATTCAACTCGTAGA+TGG + chr2_3:39590566-39590585 None:intergenic 35.0%
AGAATAACAAACCGATGGTT+GGG + chr2_3:39590683-39590702 None:intergenic 35.0%
TAGAATAACAAACCGATGGT+TGG + chr2_3:39590684-39590703 None:intergenic 35.0%
AATTGTGAATATAAGGCTCC+TGG - chr2_3:39590775-39590794 Msa0291320:CDS 35.0%
CAAAGGAAGAAAAACAGTAC+AGG - chr2_3:39590857-39590876 Msa0291320:CDS 35.0%
CACAACCAACTGAAAAATTC+TGG - chr2_3:39590919-39590938 Msa0291320:CDS 35.0%
GAGGAATTTACGTCCAATTA+TGG - chr2_3:39590982-39591001 Msa0291320:CDS 35.0%
ATGGACATCGTTGAAATCAA+TGG + chr2_3:39591013-39591032 None:intergenic 35.0%
!! CCTAACTTTTCAAGATCATC+CGG + chr2_3:39591036-39591055 None:intergenic 35.0%
ATATAATCAAAGGTGGTGAC+AGG + chr2_3:39591149-39591168 None:intergenic 35.0%
ATGGGATAAGGAAGAATAGA+TGG + chr2_3:39591502-39591521 None:intergenic 35.0%
TTCCTTATCCCATATGTTCT+TGG - chr2_3:39591509-39591528 Msa0291320:intron 35.0%
TACCAAGAACATATGGGATA+AGG + chr2_3:39591514-39591533 None:intergenic 35.0%
!! TGGCTTTGAGAGAAATTAGA+AGG + chr2_3:39591588-39591607 None:intergenic 35.0%
AGGCAAATCGCAAAACAATT+TGG + chr2_3:39591615-39591634 None:intergenic 35.0%
! TTTGCGATTTGCCTTTTATG+AGG - chr2_3:39591621-39591640 Msa0291320:intron 35.0%
!! ACAATCTCTGTCAAGTTGAT+AGG - chr2_3:39591928-39591947 Msa0291320:intron 35.0%
ATCTAACATGCATGAAAGAG+TGG + chr2_3:39592132-39592151 None:intergenic 35.0%
TAATTACACATAACTCCCTG+TGG + chr2_3:39592396-39592415 None:intergenic 35.0%
CACTTTAAGTGCGAAACTTA+TGG - chr2_3:39592689-39592708 Msa0291320:intron 35.0%
CAAGACAACACAAAACTTGA+TGG + chr2_3:39592752-39592771 None:intergenic 35.0%
!! GTTTTAGACTTGGCTTGAAT+AGG - chr2_3:39592995-39593014 Msa0291320:intron 35.0%
ACTCATGATCATAGTAGACA+TGG - chr2_3:39593067-39593086 Msa0291320:intron 35.0%
AATGAAAATGAAGGAGACCT+TGG + chr2_3:39593250-39593269 None:intergenic 35.0%
! GTCTCCTTCATTTTCATTCA+AGG - chr2_3:39593252-39593271 Msa0291320:intron 35.0%
GAAGCCTTGAATGAAAATGA+AGG + chr2_3:39593259-39593278 None:intergenic 35.0%
! GATAGCTCTATTTATAGGTG+AGG + chr2_3:39593388-39593407 None:intergenic 35.0%
! GATCATTGCAGTGATTTTTG+CGG - chr2_3:39593689-39593708 Msa0291320:intron 35.0%
!!! TATTTTTTGGTGCCTCTTTC+TGG - chr2_3:39593819-39593838 Msa0291320:intron 35.0%
GATCTTTGATGAAACAACTC+CGG + chr2_3:39593848-39593867 None:intergenic 35.0%
TGTTCTATTAAAACCACCGT+CGG - chr2_3:39594000-39594019 Msa0291320:intron 35.0%
TTCGAATTGTTATGCTCGAA+AGG - chr2_3:39594110-39594129 Msa0291320:intron 35.0%
TCGAATTGTTATGCTCGAAA+GGG - chr2_3:39594111-39594130 Msa0291320:intron 35.0%
!! TGGACTAGTTTCTATGTTGA+CGG - chr2_3:39594223-39594242 Msa0291320:intron 35.0%
CATTCATCCGTATCAAAACT+GGG + chr2_3:39594261-39594280 None:intergenic 35.0%
ATGCTCTATTCAATGATACG+GGG - chr2_3:39594278-39594297 Msa0291320:intron 35.0%
TGAGTACGTAGTAGCATTAA+TGG - chr2_3:39594699-39594718 Msa0291320:intron 35.0%
GCATTAATGGTTGTTTGTCA+AGG - chr2_3:39594712-39594731 Msa0291320:intron 35.0%
! TTTTCTTCATGAGCATGCTA+AGG + chr2_3:39594744-39594763 None:intergenic 35.0%
! TGAAGAGAGAATGATGATGT+TGG - chr2_3:39594777-39594796 Msa0291320:intron 35.0%
TTGCGATGTTTATGTCTTCA+AGG + chr2_3:39594835-39594854 None:intergenic 35.0%
ATTGAATAGAGACACAACGT+TGG + chr2_3:39595857-39595876 None:intergenic 35.0%
AACGTTGTGTCTCTATTCAA+TGG - chr2_3:39595856-39595875 Msa0291320:intron 35.0%
AGAATAACAAACCGATGGTT+GGG + chr2_3:39590683-39590702 None:intergenic 35.0%
TAGAATAACAAACCGATGGT+TGG + chr2_3:39590684-39590703 None:intergenic 35.0%
AATTGTGAATATAAGGCTCC+TGG - chr2_3:39590775-39590794 Msa0291320:CDS 35.0%
CAAAGGAAGAAAAACAGTAC+AGG - chr2_3:39590857-39590876 Msa0291320:CDS 35.0%
CACAACCAACTGAAAAATTC+TGG - chr2_3:39590919-39590938 Msa0291320:CDS 35.0%
ATGGACATCGTTGAAATCAA+TGG + chr2_3:39591013-39591032 None:intergenic 35.0%
!! CCTAACTTTTCAAGATCATC+CGG + chr2_3:39591036-39591055 None:intergenic 35.0%
ATATAATCAAAGGTGGTGAC+AGG + chr2_3:39591149-39591168 None:intergenic 35.0%
AGGAATCTGTTCTTGAAGCT+TGG + chr2_3:39590659-39590678 None:intergenic 40.0%
GAATAACAAACCGATGGTTG+GGG + chr2_3:39590682-39590701 None:intergenic 40.0%
GGGATAGAATAACAAACCGA+TGG + chr2_3:39590688-39590707 None:intergenic 40.0%
TGAATATAAGGCTCCTGGTT+CGG - chr2_3:39590780-39590799 Msa0291320:CDS 40.0%
TTGGTTGTGTTGAGTGATTC+TGG + chr2_3:39590908-39590927 None:intergenic 40.0%
ATTGGACGTAAATTCCTCGA+AGG + chr2_3:39590980-39590999 None:intergenic 40.0%
TGATTTCAACGATGTCCATC+CGG - chr2_3:39591014-39591033 Msa0291320:CDS 40.0%
!! ACTTTTCAAGATCATCCGGA+TGG + chr2_3:39591032-39591051 None:intergenic 40.0%
CCGGATGATCTTGAAAAGTT+AGG - chr2_3:39591033-39591052 Msa0291320:CDS 40.0%
AAAACTATTGGGCTAAGAGG+AGG - chr2_3:39591170-39591189 Msa0291320:intron 40.0%
AAACTATTGGGCTAAGAGGA+GGG - chr2_3:39591171-39591190 Msa0291320:intron 40.0%
AGTAGTATGATTGGGTCAAG+AGG + chr2_3:39591804-39591823 None:intergenic 40.0%
TTCAGGACTCAATATCCAGT+CGG - chr2_3:39592071-39592090 Msa0291320:intron 40.0%
! AGATTAGCTGTGTTGTGTGT+AGG + chr2_3:39592250-39592269 None:intergenic 40.0%
! GATTCAATCAGTTTGGTGGA+TGG + chr2_3:39592331-39592350 None:intergenic 40.0%
ACTTGCGGATTCAATCAGTT+TGG + chr2_3:39592338-39592357 None:intergenic 40.0%
TGATTGAATCCGCAAGTGTA+CGG - chr2_3:39592341-39592360 Msa0291320:intron 40.0%
!! GTATTTAACGATGGACTGGA+AGG + chr2_3:39592916-39592935 None:intergenic 40.0%
! TGAGTAGACCTTCTAGTCTT+GGG + chr2_3:39593048-39593067 None:intergenic 40.0%
TGATACACCACAAAACACGT+AGG - chr2_3:39593778-39593797 Msa0291320:intron 40.0%
CGAACAACAACAGATCTTGA+AGG + chr2_3:39593923-39593942 None:intergenic 40.0%
!! CGAGTTTGTTCTAGTTTGAC+CGG - chr2_3:39594060-39594079 Msa0291320:intron 40.0%
!! CAAAGTTGATGAAGCAACTC+CGG + chr2_3:39594082-39594101 None:intergenic 40.0%
GCATTCATCCGTATCAAAAC+TGG + chr2_3:39594262-39594281 None:intergenic 40.0%
TTATGTCTTCAAGGCTTAGC+AGG + chr2_3:39594826-39594845 None:intergenic 40.0%
TGCAATATCCCTACCAATTG+AGG - chr2_3:39595639-39595658 Msa0291320:intron 40.0%
AGGAATCTGTTCTTGAAGCT+TGG + chr2_3:39590659-39590678 None:intergenic 40.0%
GAATAACAAACCGATGGTTG+GGG + chr2_3:39590682-39590701 None:intergenic 40.0%
GGGATAGAATAACAAACCGA+TGG + chr2_3:39590688-39590707 None:intergenic 40.0%
TGAATATAAGGCTCCTGGTT+CGG - chr2_3:39590780-39590799 Msa0291320:CDS 40.0%
TTGGTTGTGTTGAGTGATTC+TGG + chr2_3:39590908-39590927 None:intergenic 40.0%
ATTGGACGTAAATTCCTCGA+AGG + chr2_3:39590980-39590999 None:intergenic 40.0%
TGATTTCAACGATGTCCATC+CGG - chr2_3:39591014-39591033 Msa0291320:CDS 40.0%
!! ACTTTTCAAGATCATCCGGA+TGG + chr2_3:39591032-39591051 None:intergenic 40.0%
CCGGATGATCTTGAAAAGTT+AGG - chr2_3:39591033-39591052 Msa0291320:CDS 40.0%
AAAACTATTGGGCTAAGAGG+AGG - chr2_3:39591170-39591189 Msa0291320:intron 40.0%
AAACTATTGGGCTAAGAGGA+GGG - chr2_3:39591171-39591190 Msa0291320:intron 40.0%
TTCTTGAAGCTTGGAGTTGG+AGG + chr2_3:39590650-39590669 None:intergenic 45.0%
CTGTTCTTGAAGCTTGGAGT+TGG + chr2_3:39590653-39590672 None:intergenic 45.0%
ATTTCATGGATGTCCGAACC+AGG + chr2_3:39590796-39590815 None:intergenic 45.0%
TGAGATCAGAGAACTGGTTG+AGG + chr2_3:39590957-39590976 None:intergenic 45.0%
!! TTGCTGCAAGTGATTTGCTG+CGG - chr2_3:39591655-39591674 Msa0291320:intron 45.0%
GTATGATTGGGTCAAGAGGA+GGG + chr2_3:39591800-39591819 None:intergenic 45.0%
AGTATGATTGGGTCAAGAGG+AGG + chr2_3:39591801-39591820 None:intergenic 45.0%
!! AAAGAGTGTTGTTAGGGTGG+AGG + chr2_3:39592198-39592217 None:intergenic 45.0%
!! CTGAAAGAGTGTTGTTAGGG+TGG + chr2_3:39592201-39592220 None:intergenic 45.0%
TGTTGTGTGTAGGTGAAGGT+GGG + chr2_3:39592240-39592259 None:intergenic 45.0%
! ATCAGTTTGGTGGATGGTGA+TGG + chr2_3:39592325-39592344 None:intergenic 45.0%
TGCGGATTCAATCAGTTTGG+TGG + chr2_3:39592335-39592354 None:intergenic 45.0%
CGATAAGAACCGTACACTTG+CGG + chr2_3:39592353-39592372 None:intergenic 45.0%
!! CCTTCTAGTCTTGGGATTGT+TGG + chr2_3:39593040-39593059 None:intergenic 45.0%
CCAACAATCCCAAGACTAGA+AGG - chr2_3:39593037-39593056 Msa0291320:intron 45.0%
GTGAGTAGACCTTCTAGTCT+TGG + chr2_3:39593049-39593068 None:intergenic 45.0%
! CATTGCAGTGATTTTTGCGG+TGG - chr2_3:39593692-39593711 Msa0291320:intron 45.0%
! TTTTGCGGTGGTTTCTTCGT+TGG - chr2_3:39593704-39593723 Msa0291320:intron 45.0%
ACCACAAAACACGTAGGTTC+TGG - chr2_3:39593784-39593803 Msa0291320:intron 45.0%
! ACCAGAACCTACGTGTTTTG+TGG + chr2_3:39593788-39593807 None:intergenic 45.0%
! AACACGTAGGTTCTGGTACT+TGG - chr2_3:39593791-39593810 Msa0291320:intron 45.0%
!! ATCTGTTTGTTGGTTCCTCG+CGG - chr2_3:39593865-39593884 Msa0291320:intron 45.0%
! TCGGTTTGCTTCGTTCATGA+CGG - chr2_3:39593892-39593911 Msa0291320:intron 45.0%
GGTTAGGTTCTTCTGGGTTA+TGG - chr2_3:39594036-39594055 Msa0291320:intron 45.0%
CGGAGTTGCTTCATCAACTT+TGG - chr2_3:39594080-39594099 Msa0291320:intron 45.0%
TGTTATGCTCGAAAGGGCTA+TGG - chr2_3:39594117-39594136 Msa0291320:intron 45.0%
GGTCTGTTCAAGTCATTTCG+TGG - chr2_3:39594151-39594170 Msa0291320:intron 45.0%
ACACGACCACTGCAAGTTTA+CGG + chr2_3:39594177-39594196 None:intergenic 45.0%
CTCTATTCAATGATACGGGG+AGG - chr2_3:39594281-39594300 Msa0291320:intron 45.0%
GCGAACAAACTCATCTACCA+TGG + chr2_3:39594374-39594393 None:intergenic 45.0%
! TGTTGTTTACCCGTTAGGGA+TGG - chr2_3:39594422-39594441 Msa0291320:intron 45.0%
CATATTATATGCAGGGGCTG+TGG + chr2_3:39595621-39595640 None:intergenic 45.0%
CGAGCTTACCTCAATTGGTA+GGG + chr2_3:39595650-39595669 None:intergenic 45.0%
TACCAATTGAGGTAAGCTCG+CGG - chr2_3:39595650-39595669 Msa0291320:intron 45.0%
TTCTTGAAGCTTGGAGTTGG+AGG + chr2_3:39590650-39590669 None:intergenic 45.0%
CTGTTCTTGAAGCTTGGAGT+TGG + chr2_3:39590653-39590672 None:intergenic 45.0%
ATTTCATGGATGTCCGAACC+AGG + chr2_3:39590796-39590815 None:intergenic 45.0%
TGAGATCAGAGAACTGGTTG+AGG + chr2_3:39590957-39590976 None:intergenic 45.0%
!! ATAAAAAATAACAAAAAATA+TGG - chr2_3:39593598-39593617 Msa0291320:intron 5.0%
!! TTTATTTATAGTAAAATTTA+AGG + chr2_3:39595051-39595070 None:intergenic 5.0%
ACAGATTCCTCCCCAACCAT+CGG - chr2_3:39590669-39590688 Msa0291320:three_prime_UTR 50.0%
TAACAAACCGATGGTTGGGG+AGG + chr2_3:39590679-39590698 None:intergenic 50.0%
CGAAGGTGAGATCAGAGAAC+TGG + chr2_3:39590963-39590982 None:intergenic 50.0%
GTTCTCTGATCTCACCTTCG+AGG - chr2_3:39590963-39590982 Msa0291320:CDS 50.0%
GGGTCAAGAGGAGGGATATA+TGG + chr2_3:39591792-39591811 None:intergenic 50.0%
GTGTTGTGTGTAGGTGAAGG+TGG + chr2_3:39592241-39592260 None:intergenic 50.0%
GCTGTGTTGTGTGTAGGTGA+AGG + chr2_3:39592244-39592263 None:intergenic 50.0%
!! AGTTTGGTGGATGGTGATGG+AGG + chr2_3:39592322-39592341 None:intergenic 50.0%
!! ATTCGGTTTTGGTCCCTGAG+AGG - chr2_3:39593439-39593458 Msa0291320:intron 50.0%
GAACAACCACTCAAACCCAC+CGG + chr2_3:39593744-39593763 None:intergenic 50.0%
! CGTAGGTTCTGGTACTTGGT+AGG - chr2_3:39593795-39593814 Msa0291320:intron 50.0%
GTTTGCTTCGTTCATGACGG+TGG - chr2_3:39593895-39593914 Msa0291320:intron 50.0%
CCAGAAGAACCTAACCACCA+CGG + chr2_3:39594032-39594051 None:intergenic 50.0%
CGTGGTGGTTAGGTTCTTCT+GGG - chr2_3:39594030-39594049 Msa0291320:intron 50.0%
AGGGCTATGGCATAGCGTTA+TGG - chr2_3:39594130-39594149 Msa0291320:intron 50.0%
!!! CAGTGGTCGTGTTTTAGTCG+CGG - chr2_3:39594185-39594204 Msa0291320:intron 50.0%
! TTTTAGTCGCGGCAAGTGGT+GGG - chr2_3:39594196-39594215 Msa0291320:intron 50.0%
! TTTGGTTTCGATCCCCGCTT+TGG - chr2_3:39594333-39594352 Msa0291320:intron 50.0%
TTGGTTTCGATCCCCGCTTT+GGG - chr2_3:39594334-39594353 Msa0291320:intron 50.0%
ACAATCCAGCGAACCCAAAG+CGG + chr2_3:39594350-39594369 None:intergenic 50.0%
! TGTGGAGAAGTGCAGTGTCT+AGG - chr2_3:39595588-39595607 Msa0291320:intron 50.0%
! GTGGAGAAGTGCAGTGTCTA+GGG - chr2_3:39595589-39595608 Msa0291320:intron 50.0%
GCGAGCTTACCTCAATTGGT+AGG + chr2_3:39595651-39595670 None:intergenic 50.0%
ACCAATTGAGGTAAGCTCGC+GGG - chr2_3:39595651-39595670 Msa0291320:intron 50.0%
ACAGATTCCTCCCCAACCAT+CGG - chr2_3:39590669-39590688 Msa0291320:three_prime_UTR 50.0%
TAACAAACCGATGGTTGGGG+AGG + chr2_3:39590679-39590698 None:intergenic 50.0%
CGAAGGTGAGATCAGAGAAC+TGG + chr2_3:39590963-39590982 None:intergenic 50.0%
GTTCTCTGATCTCACCTTCG+AGG - chr2_3:39590963-39590982 Msa0291320:CDS 50.0%
!! CTGCAAGTGATTTGCTGCGG+TGG - chr2_3:39591658-39591677 Msa0291320:intron 55.0%
! GAGTGTTGTTAGGGTGGAGG+AGG + chr2_3:39592195-39592214 None:intergenic 55.0%
ATATGGCGTGATCGACGCGA+AGG - chr2_3:39593615-39593634 Msa0291320:intron 55.0%
TGCGGTGGTTTCTTCGTTGG+AGG - chr2_3:39593707-39593726 Msa0291320:intron 55.0%
! TGGTGCCTCTTTCTGGTGAC+CGG - chr2_3:39593826-39593845 Msa0291320:intron 55.0%
CAACTCCGGTCACCAGAAAG+AGG + chr2_3:39593834-39593853 None:intergenic 55.0%
! GTTGGTTCCTCGCGGATGTT+CGG - chr2_3:39593873-39593892 Msa0291320:intron 55.0%
AAGCAAACCGAACATCCGCG+AGG + chr2_3:39593883-39593902 None:intergenic 55.0%
CCGTGGTGGTTAGGTTCTTC+TGG - chr2_3:39594029-39594048 Msa0291320:intron 55.0%
TCGTGGCCGTAAACTTGCAG+TGG - chr2_3:39594168-39594187 Msa0291320:intron 55.0%
!!! CGTGTTTTAGTCGCGGCAAG+TGG - chr2_3:39594192-39594211 Msa0291320:intron 55.0%
!! GTTTTAGTCGCGGCAAGTGG+TGG - chr2_3:39594195-39594214 Msa0291320:intron 55.0%
AATCCAGCGAACCCAAAGCG+GGG + chr2_3:39594348-39594367 None:intergenic 55.0%
CAATCCAGCGAACCCAAAGC+GGG + chr2_3:39594349-39594368 None:intergenic 55.0%
GGGTTCGCTGGATTGTACCA+TGG - chr2_3:39594354-39594373 Msa0291320:intron 55.0%
ACCCGCGAGCTTACCTCAAT+TGG + chr2_3:39595655-39595674 None:intergenic 55.0%
GGTGGCGCGATCGAATCCTT+TGG - chr2_3:39593636-39593655 Msa0291320:intron 60.0%
! TGGTGGCGACGCGAAACCAA+AGG + chr2_3:39593655-39593674 None:intergenic 60.0%
GTTGGAGGCCATTGCAGAGC+CGG - chr2_3:39593722-39593741 Msa0291320:intron 60.0%
!! CAAACCCACCGGCTCTGCAA+TGG + chr2_3:39593733-39593752 None:intergenic 60.0%
TGGCGTGATCGACGCGAAGG+TGG - chr2_3:39593618-39593637 Msa0291320:intron 65.0%
GAGGCCATTGCAGAGCCGGT+GGG - chr2_3:39593726-39593745 Msa0291320:intron 65.0%
! GCAGAGCCGGTGGGTTTGAG+TGG - chr2_3:39593735-39593754 Msa0291320:intron 65.0%
! GATCCCCGCTTTGGGTTCGC+TGG - chr2_3:39594342-39594361 Msa0291320:intron 65.0%
GGAGGCCATTGCAGAGCCGG+TGG - chr2_3:39593725-39593744 Msa0291320:intron 70.0%
ACCACCACGGCAGTCGCCGA+CGG + chr2_3:39594019-39594038 None:intergenic 70.0%
CGGCGACTGCCGTGGTGGTT+AGG - chr2_3:39594020-39594039 Msa0291320:intron 70.0%
!! CGCGGCAAGTGGTGGGTGTG+TGG - chr2_3:39594203-39594222 Msa0291320:intron 70.0%
ACCACCGTCGGCGACTGCCG+TGG - chr2_3:39594012-39594031 Msa0291320:intron 75.0%
ACCACGGCAGTCGCCGACGG+TGG + chr2_3:39594016-39594035 None:intergenic 75.0%
ACCGTCGGCGACTGCCGTGG+TGG - chr2_3:39594015-39594034 Msa0291320:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 39590512 39596580 39590512 ID=Msa0291320;Name=Msa0291320
chr2_3 mRNA 39590512 39596580 39590512 ID=Msa0291320-mRNA-1;Parent=Msa0291320;Name=Msa0291320-mRNA-1;_AED=0.12;_eAED=0.12;_QI=113|0.5|0.66|1|0.5|0.66|3|250|197
chr2_3 exon 39590512 39591052 39590512 ID=Msa0291320-mRNA-1:exon:12815;Parent=Msa0291320-mRNA-1
chr2_3 exon 39596066 39596302 39596066 ID=Msa0291320-mRNA-1:exon:12814;Parent=Msa0291320-mRNA-1
chr2_3 exon 39596402 39596580 39596402 ID=Msa0291320-mRNA-1:exon:12813;Parent=Msa0291320-mRNA-1
chr2_3 five_prime_UTR 39596468 39596580 39596468 ID=Msa0291320-mRNA-1:five_prime_utr;Parent=Msa0291320-mRNA-1
chr2_3 CDS 39596402 39596467 39596402 ID=Msa0291320-mRNA-1:cds;Parent=Msa0291320-mRNA-1
chr2_3 CDS 39596066 39596302 39596066 ID=Msa0291320-mRNA-1:cds;Parent=Msa0291320-mRNA-1
chr2_3 CDS 39590762 39591052 39590762 ID=Msa0291320-mRNA-1:cds;Parent=Msa0291320-mRNA-1
chr2_3 three_prime_UTR 39590512 39590761 39590512 ID=Msa0291320-mRNA-1:three_prime_utr;Parent=Msa0291320-mRNA-1
Gene Sequence

>Msa0291320

ATGGATGTAAACAAAGAGCTAACCTCCAACTCCAAGCTTCAAGAACAGATTCCTCCCCAACCATCGGCTCCTGGTTCGGACATCCATGAAATATTTGAAAAGTGGTGCAAGGAATTCGACAAAACATATTCTTCAAAGGAAGAAAAACAGTACAGGTTCAAAGTGTTTGAAGAAAGATATGCCAGAATCACTCAACACAACCAACTGAAAAATTCTGGTTACACTCTAGGCCTCAACCAGTTCTCTGATCTCACCTTCGAGGAATTTACGTCCAATTATGGTTGTTCCATTGATTTCAACGATGCTCCTGGTTCGGACATCCATGAAATATTTGAAAAGTGGTGCAAGGAATTCGACAAAACATATTCTTCAAAGGAAGAAAAACAGTACAGGTTCAAAGTGTTTGAAGAAAGATATGCCAGAATCACTCAACACAACCAACTGAAAAATTCTGGTTACACTCTAGGCCTCAACCAGTTCTCTGATCTCACCTTCGAGGAATTTACGTCCAATTATCGTTGTTCCATTGATTTCAACGATGTCCATCCGGATGATCTTGAAAAGTTAGGCATTAACCCAGTCAAACATCAATGA

Protein sequence

>Msa0291320

MDVNKELTSNSKLQEQIPPQPSAPGSDIHEIFEKWCKEFDKTYSSKEEKQYRFKVFEERYARITQHNQLKNSGYTLGLNQFSDLTFEEFTSNYGCSIDFNDAPGSDIHEIFEKWCKEFDKTYSSKEEKQYRFKVFEERYARITQHNQLKNSGYTLGLNQFSDLTFEEFTSNYRCSIDFNDVHPDDLEKLGINPVKHQ*