Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191500 | sp|Q96K49|TM87B_HUMAN | 28.662 | 314 | 202 | 5 | 168 | 464 | 205 | 513 | 1.17e-31 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191500 | A0A396GFT5 | 87.190 | 484 | 13 | 4 | 20 | 469 | 23 | 491 | 0.0 | 823 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0604750 | Msa1191500 | 0.801522 | 8.653077e-49 | -8.615850e-47 |
| Msa0437620 | Msa1191500 | 0.809648 | 1.705567e-50 | -8.615850e-47 |
| Msa1078820 | Msa1191500 | 0.804749 | 1.860469e-49 | -8.615850e-47 |
| Msa1123970 | Msa1191500 | 0.807893 | 4.047162e-50 | -8.615850e-47 |
| Msa1169650 | Msa1191500 | 0.804141 | 2.490240e-49 | -8.615850e-47 |
| Msa1191500 | Msa1227830 | 0.822542 | 2.240403e-53 | -8.615850e-47 |
| Msa1191500 | Msa1396240 | 0.812894 | 3.368696e-51 | -8.615850e-47 |
| Msa0570010 | Msa1191500 | 0.816196 | 6.263570e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191500 | MtrunA17_Chr8g0334581 | 87.190 | 484 | 13 | 4 | 20 | 469 | 23 | 491 | 0.0 | 823 |
| Msa1191500 | MtrunA17_Chr5g0428321 | 56.055 | 512 | 153 | 14 | 23 | 469 | 37 | 541 | 0.0 | 524 |
| Msa1191500 | MtrunA17_Chr8g0344451 | 42.339 | 496 | 227 | 11 | 24 | 469 | 19 | 505 | 9.42e-118 | 354 |
| Msa1191500 | MtrunA17_Chr2g0278311 | 40.249 | 482 | 227 | 11 | 25 | 453 | 23 | 496 | 2.47e-112 | 341 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191500 | AT1G61670.1 | 51.731 | 520 | 169 | 13 | 13 | 469 | 13 | 513 | 3.82e-160 | 463 |
| Msa1191500 | AT1G61670.2 | 51.731 | 520 | 169 | 13 | 13 | 469 | 13 | 513 | 3.82e-160 | 463 |
| Msa1191500 | AT2G01070.1 | 40.918 | 501 | 239 | 14 | 10 | 469 | 12 | 496 | 7.54e-116 | 349 |
| Msa1191500 | AT1G72480.1 | 40.396 | 505 | 233 | 11 | 22 | 469 | 16 | 509 | 2.90e-112 | 341 |
| Msa1191500 | AT2G01070.2 | 41.348 | 445 | 212 | 11 | 10 | 413 | 12 | 448 | 1.60e-104 | 319 |
| Msa1191500 | AT1G10980.1 | 36.965 | 514 | 237 | 16 | 6 | 449 | 2 | 498 | 7.53e-94 | 293 |
Find 105 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCACCAAGATTACAATTT+TGG | 0.064249 | 8_1:+36052085 | None:intergenic |
| CTTGGATTATTCCCACTTTC+TGG | 0.083215 | 8_1:-36050543 | Msa1191500:CDS |
| TGCTGGTGATATGTGTTCTT+TGG | 0.199971 | 8_1:-36050498 | Msa1191500:CDS |
| ATTTGCCACAGCTCACTTAA+AGG | 0.223100 | 8_1:+36050568 | None:intergenic |
| GGCCTATAGGAATTACTATA+TGG | 0.237693 | 8_1:-36051630 | Msa1191500:CDS |
| ACAGCAAATTAAATCAGATT+TGG | 0.273346 | 8_1:+36052128 | None:intergenic |
| AAGGAGAAACTTGGCTAAAC+TGG | 0.284415 | 8_1:-36050866 | Msa1191500:CDS |
| TTTGGGAAAGTACGGATTTA+GGG | 0.301454 | 8_1:+36052044 | None:intergenic |
| TGGATGATGGCGGAGTGTTT+AGG | 0.302576 | 8_1:+36052240 | None:intergenic |
| GCTGGTGATATGTGTTCTTT+GGG | 0.306978 | 8_1:-36050497 | Msa1191500:CDS |
| GTATCTAAAGTTACGGTTCT+TGG | 0.307265 | 8_1:-36051505 | Msa1191500:CDS |
| TATCTAAAGTTACGGTTCTT+GGG | 0.308794 | 8_1:-36051504 | Msa1191500:CDS |
| TTGGTTGTGTCTATGGGATA+TGG | 0.311354 | 8_1:-36051559 | Msa1191500:CDS |
| AACCCTAATGGTTATCTTCC+CGG | 0.319253 | 8_1:-36051868 | Msa1191500:CDS |
| CAGCAAATTAAATCAGATTT+GGG | 0.321303 | 8_1:+36052129 | None:intergenic |
| CTCCAAGGTACCACTGTTAC+TGG | 0.323139 | 8_1:-36051907 | Msa1191500:intron |
| CCAAAGACATAAAAGCATAA+AGG | 0.349489 | 8_1:+36051824 | None:intergenic |
| AAAACCCAAAATTGTAATCT+TGG | 0.350341 | 8_1:-36052090 | Msa1191500:CDS |
| GGATGATGGCGGAGTGTTTA+GGG | 0.353685 | 8_1:+36052241 | None:intergenic |
| GACCGGTGTTCTGCTGCATT+TGG | 0.357042 | 8_1:+36052214 | None:intergenic |
| CTGCATTTGGCCGTGGATGA+TGG | 0.361558 | 8_1:+36052227 | None:intergenic |
| TTTCCGGGAAGATAACCATT+AGG | 0.362321 | 8_1:+36051865 | None:intergenic |
| TACTAATCAAATTGTTCATA+TGG | 0.365544 | 8_1:-36051998 | Msa1191500:CDS |
| GCTTTCATATACTCTATTGC+TGG | 0.374709 | 8_1:-36050515 | Msa1191500:CDS |
| TTCCGGGAAGATAACCATTA+GGG | 0.380604 | 8_1:+36051866 | None:intergenic |
| AGTGCCACCGATCTTACATT+TGG | 0.385955 | 8_1:-36049420 | Msa1191500:CDS |
| CTGTTAAGAAGACGCTTTCA+AGG | 0.392397 | 8_1:-36051591 | Msa1191500:CDS |
| CAAAGACATAAAAGCATAAA+GGG | 0.393526 | 8_1:+36051825 | None:intergenic |
| ATCGAAGCGTTAACGTTGTT+TGG | 0.396895 | 8_1:+36052381 | None:intergenic |
| ATTACTGCCGTCATTGCTCT+TGG | 0.422985 | 8_1:-36051712 | Msa1191500:CDS |
| GCATTAATTTGAACAGTTTG+AGG | 0.426226 | 8_1:+36051973 | None:intergenic |
| CATTGCATGGATTGGCTTTG+AGG | 0.426377 | 8_1:-36050794 | Msa1191500:intron |
| TGAAAGCAGGCACCAGAAAG+TGG | 0.426991 | 8_1:+36050531 | None:intergenic |
| GCGGTGAGTGAAGGGTTGTT+TGG | 0.429520 | 8_1:+36052347 | None:intergenic |
| GCTACTGGTACTAGGCCTAT+AGG | 0.433488 | 8_1:-36051643 | Msa1191500:intron |
| CTGTTACTGGTAGAACTGTT+TGG | 0.433697 | 8_1:-36051894 | Msa1191500:CDS |
| GAATGGTTGAGATGGCGTTT+TGG | 0.433793 | 8_1:-36051690 | Msa1191500:CDS |
| TCTTTCCTTCCGCTCAAGCT+TGG | 0.434109 | 8_1:+36049452 | None:intergenic |
| CTACTGTCCATTGCATGGAT+TGG | 0.441540 | 8_1:-36050802 | Msa1191500:CDS |
| CCATAAAGGACATACCTAGT+AGG | 0.447378 | 8_1:+36050460 | None:intergenic |
| CTATGGGATATGGTGTTGTT+AGG | 0.454199 | 8_1:-36051549 | Msa1191500:CDS |
| AGGGTTGTTTGGAGTAGTAA+TGG | 0.461845 | 8_1:+36052358 | None:intergenic |
| ACTGTTCAAATTAATGCTAC+TGG | 0.465687 | 8_1:-36051967 | Msa1191500:intron |
| CTCCTTCTCGTAACCCTACT+AGG | 0.467421 | 8_1:-36050474 | Msa1191500:intron |
| GTGAGCTGTGGCAAATTGCT+TGG | 0.480389 | 8_1:-36050561 | Msa1191500:CDS |
| AATGCTTTCTTCTTCCATGC+CGG | 0.493479 | 8_1:-36052321 | Msa1191500:CDS |
| GGGTGTTGTATCTAAAGTTA+CGG | 0.495182 | 8_1:-36051512 | Msa1191500:CDS |
| TGCCGTCATTGCTCTTGGAA+TGG | 0.495290 | 8_1:-36051707 | Msa1191500:CDS |
| TGTTCTGCTGCATTTGGCCG+TGG | 0.505745 | 8_1:+36052220 | None:intergenic |
| GCCCATATAGTAATTCCTAT+AGG | 0.507290 | 8_1:+36051628 | None:intergenic |
| CTTGAGCGGAAGGAAAGAAT+AGG | 0.509552 | 8_1:-36049447 | Msa1191500:CDS |
| ATCTAAAGTTACGGTTCTTG+GGG | 0.514793 | 8_1:-36051503 | Msa1191500:CDS |
| CTGTGCTACTGTCCATTGCA+TGG | 0.515135 | 8_1:-36050807 | Msa1191500:CDS |
| CAAAGTCATCTGTTCCCTCT+AGG | 0.518582 | 8_1:+36049532 | None:intergenic |
| GATGTAGACAAGGAGAAACT+TGG | 0.519471 | 8_1:-36050875 | Msa1191500:intron |
| GCCTATAGGAATTACTATAT+GGG | 0.520268 | 8_1:-36051629 | Msa1191500:CDS |
| ACTGTTTGGAGAAACCCTAA+TGG | 0.521221 | 8_1:-36051880 | Msa1191500:CDS |
| TACATTTGGAGATGATATTG+AGG | 0.523224 | 8_1:-36049406 | Msa1191500:CDS |
| CATAAAGGACATACCTAGTA+GGG | 0.531044 | 8_1:+36050461 | None:intergenic |
| TAAATCCGTACTTTCCCAAA+AGG | 0.531889 | 8_1:-36052041 | Msa1191500:CDS |
| AGCATTTGAGCGGTGAGTGA+AGG | 0.534682 | 8_1:+36052338 | None:intergenic |
| TGGGAAATCTAAACTGCTGT+TGG | 0.537710 | 8_1:-36051413 | Msa1191500:CDS |
| GATGGATTCGAAACGGATGA+AGG | 0.542504 | 8_1:+36052275 | None:intergenic |
| GGCATCCAAGCTTGAGCGGA+AGG | 0.544031 | 8_1:-36049457 | Msa1191500:CDS |
| ATCATCTCCAAATGTAAGAT+CGG | 0.544128 | 8_1:+36049413 | None:intergenic |
| AACCATTCCAAGAGCAATGA+CGG | 0.548462 | 8_1:+36051705 | None:intergenic |
| GCAATAGAGTATATGAAAGC+AGG | 0.548865 | 8_1:+36050518 | None:intergenic |
| TTTAGGGCGAGTGAAGGAGA+TGG | 0.550244 | 8_1:+36052257 | None:intergenic |
| TGCTCTTGGAATGGTTGAGA+TGG | 0.551163 | 8_1:-36051698 | Msa1191500:CDS |
| GCATTTGAGCGGTGAGTGAA+GGG | 0.554213 | 8_1:+36052339 | None:intergenic |
| TTCGAAACGGATGAAGGAAG+AGG | 0.564190 | 8_1:+36052281 | None:intergenic |
| AGCAGTGTAGCAAAGATGAC+TGG | 0.574541 | 8_1:-36049486 | Msa1191500:CDS |
| CTCAAAGCCAATCCATGCAA+TGG | 0.575344 | 8_1:+36050795 | None:intergenic |
| GTTAGGCCAACGCTCGTCGA+GGG | 0.580698 | 8_1:-36051532 | Msa1191500:CDS |
| TCTAGATATGCATACCTAGA+GGG | 0.580896 | 8_1:-36049546 | Msa1191500:intron |
| GTCAAAGATCGTAACCGTAT+CGG | 0.581197 | 8_1:-36052168 | Msa1191500:CDS |
| AGAGAGCTTCAGCACCGGCA+TGG | 0.581638 | 8_1:+36052307 | None:intergenic |
| ACAGTAGCACAGACACTGCA+AGG | 0.591583 | 8_1:+36050818 | None:intergenic |
| TGAAGGAGATGGATTCGAAA+CGG | 0.592077 | 8_1:+36052268 | None:intergenic |
| GGAGAAGAGAGCTTCAGCAC+CGG | 0.595294 | 8_1:+36052302 | None:intergenic |
| TGTTAGGCCAACGCTCGTCG+AGG | 0.603938 | 8_1:-36051533 | Msa1191500:CDS |
| TTGGGAAAGTACGGATTTAG+GGG | 0.605624 | 8_1:+36052045 | None:intergenic |
| AAAGCATAAAGGGTGATCAA+AGG | 0.610010 | 8_1:+36051835 | None:intergenic |
| ACAACACCCTCGACGAGCGT+TGG | 0.612100 | 8_1:+36051526 | None:intergenic |
| AAACACTCCGCCATCATCCA+CGG | 0.614615 | 8_1:-36052237 | Msa1191500:CDS |
| GGCCAAATGCAGCAGAACAC+CGG | 0.615620 | 8_1:-36052216 | Msa1191500:intron |
| TTCTAGATATGCATACCTAG+AGG | 0.618947 | 8_1:-36049547 | Msa1191500:intron |
| GAAAGCAGGCACCAGAAAGT+GGG | 0.620396 | 8_1:+36050532 | None:intergenic |
| AACAGATGACTTTGACGAGG+AGG | 0.624175 | 8_1:-36049523 | Msa1191500:CDS |
| ATCTCCAAATGTAAGATCGG+TGG | 0.626067 | 8_1:+36049416 | None:intergenic |
| ATGTGGCATCCAAGCTTGAG+CGG | 0.627728 | 8_1:-36049461 | Msa1191500:CDS |
| TCTAAAGTTACGGTTCTTGG+GGG | 0.628130 | 8_1:-36051502 | Msa1191500:CDS |
| ACAGATGACTTTGACGAGGA+GGG | 0.631061 | 8_1:-36049522 | Msa1191500:CDS |
| CTAAAGTTACGGTTCTTGGG+GGG | 0.633335 | 8_1:-36051501 | Msa1191500:CDS |
| GGAGTGTTTAGGGCGAGTGA+AGG | 0.633757 | 8_1:+36052251 | None:intergenic |
| CTGATCCTTTAAGTGAGCTG+TGG | 0.639919 | 8_1:-36050573 | Msa1191500:CDS |
| AGCAAAGATGACTGGAGATG+TGG | 0.653340 | 8_1:-36049478 | Msa1191500:CDS |
| AAAGATCGTAACCGTATCGG+TGG | 0.654082 | 8_1:-36052165 | Msa1191500:CDS |
| TGGGAAAGTACGGATTTAGG+GGG | 0.654110 | 8_1:+36052046 | None:intergenic |
| AACAGTTCTACCAGTAACAG+TGG | 0.660327 | 8_1:+36051897 | None:intergenic |
| CAGTAGCACAGACACTGCAA+GGG | 0.665289 | 8_1:+36050819 | None:intergenic |
| CATTTGGCCGTGGATGATGG+CGG | 0.668061 | 8_1:+36052230 | None:intergenic |
| GGAAGAAGAAAGCATTTGAG+CGG | 0.682958 | 8_1:+36052328 | None:intergenic |
| TACCTAGTAGGGTTACGAGA+AGG | 0.690753 | 8_1:+36050472 | None:intergenic |
| GGGAACAGATGACTTTGACG+AGG | 0.724867 | 8_1:-36049526 | Msa1191500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCTATTTGTTGTTTATT+TGG | - | chr8_1:36050930-36050949 | Msa1191500:intron | 15.0% |
| !! | ATCATATATGAAACTTTATT+TGG | - | chr8_1:36051440-36051459 | Msa1191500:CDS | 15.0% |
| !! | TGTATTTAATGATCAATAAT+AGG | - | chr8_1:36051791-36051810 | Msa1191500:CDS | 15.0% |
| !! | TACTAATCAAATTGTTCATA+TGG | - | chr8_1:36049829-36049848 | Msa1191500:intron | 20.0% |
| !! | ATTCACTACAATCAATATTT+GGG | + | chr8_1:36050590-36050609 | None:intergenic | 20.0% |
| !! | AAAAAAAATACATTAGCACA+AGG | + | chr8_1:36051533-36051552 | None:intergenic | 20.0% |
| !!! | AAAGGTATAAAGATATCAAA+TGG | + | chr8_1:36051708-36051727 | None:intergenic | 20.0% |
| ! | CAGCAAATTAAATCAGATTT+GGG | + | chr8_1:36049701-36049720 | None:intergenic | 25.0% |
| ! | ACAGCAAATTAAATCAGATT+TGG | + | chr8_1:36049702-36049721 | None:intergenic | 25.0% |
| ! | AAAACCCAAAATTGTAATCT+TGG | - | chr8_1:36049737-36049756 | Msa1191500:intron | 25.0% |
| !! | TTCACCAAGATTACAATTTT+GGG | + | chr8_1:36049744-36049763 | None:intergenic | 25.0% |
| !!! | AAAAAAGTTTTGAGCCTTTT+GGG | + | chr8_1:36049803-36049822 | None:intergenic | 25.0% |
| !!! | AAAAAAAGTTTTGAGCCTTT+TGG | + | chr8_1:36049804-36049823 | None:intergenic | 25.0% |
| !! | CAAAGACATAAAAGCATAAA+GGG | + | chr8_1:36050005-36050024 | None:intergenic | 25.0% |
| !!! | TTTTGAGATTTCTTCACTTT+TGG | - | chr8_1:36050053-36050072 | Msa1191500:intron | 25.0% |
| !!! | TATGCTAATTTTAATGCTAC+TGG | - | chr8_1:36050169-36050188 | Msa1191500:intron | 25.0% |
| ! | TTCACTACAATCAATATTTG+GGG | + | chr8_1:36050589-36050608 | None:intergenic | 25.0% |
| ! | GATTCACTACAATCAATATT+TGG | + | chr8_1:36050591-36050610 | None:intergenic | 25.0% |
| !! | TATCAACTGATTTACACATT+TGG | - | chr8_1:36050728-36050747 | Msa1191500:intron | 25.0% |
| ! | TATGTAATCATGTGTTTAGA+TGG | - | chr8_1:36050769-36050788 | Msa1191500:intron | 25.0% |
| ! | ATGTAATCATGTGTTTAGAT+GGG | - | chr8_1:36050770-36050789 | Msa1191500:intron | 25.0% |
| ! | GTTTCTATAAATGTGGAATA+TGG | - | chr8_1:36050848-36050867 | Msa1191500:CDS | 25.0% |
| !!! | CAAGGGTATTTGTAAATTTT+CGG | + | chr8_1:36050994-36051013 | None:intergenic | 25.0% |
| ! | TATGAAAATCAGAAAATGCT+TGG | + | chr8_1:36051141-36051160 | None:intergenic | 25.0% |
| !! | TGTAACAGAAAATGATGTTT+TGG | - | chr8_1:36051502-36051521 | Msa1191500:CDS | 25.0% |
| !! | TATCTAGAAAATAAGGCATT+TGG | + | chr8_1:36051860-36051879 | None:intergenic | 25.0% |
| ! | GTTCATCTATCTAGAAAATA+AGG | + | chr8_1:36051867-36051886 | None:intergenic | 25.0% |
| !! | ATCTTGAGAAGATTTAGAAT+AGG | - | chr8_1:36052043-36052062 | Msa1191500:CDS | 25.0% |
| ! | AAGTGAAATGAATCAAATGA+TGG | + | chr8_1:36052159-36052178 | None:intergenic | 25.0% |
| TGAAATAAAAACCACCGATA+CGG | + | chr8_1:36049676-36049695 | None:intergenic | 30.0% | |
| !!! | TTTGGGTTTTAGAGAGAAAT+GGG | + | chr8_1:36049727-36049746 | None:intergenic | 30.0% |
| !!! | TTTTGGGTTTTAGAGAGAAA+TGG | + | chr8_1:36049728-36049747 | None:intergenic | 30.0% |
| ! | CTTCACCAAGATTACAATTT+TGG | + | chr8_1:36049745-36049764 | None:intergenic | 30.0% |
| !!! | AGGCTCAAAACTTTTTTTCA+AGG | - | chr8_1:36049806-36049825 | Msa1191500:intron | 30.0% |
| ! | GCATTAATTTGAACAGTTTG+AGG | + | chr8_1:36049857-36049876 | None:intergenic | 30.0% |
| ACTGTTCAAATTAATGCTAC+TGG | - | chr8_1:36049860-36049879 | Msa1191500:intron | 30.0% | |
| ! | CCAAAGACATAAAAGCATAA+AGG | + | chr8_1:36050006-36050025 | None:intergenic | 30.0% |
| ! | CCTTTATGCTTTTATGTCTT+TGG | - | chr8_1:36050003-36050022 | Msa1191500:intron | 30.0% |
| !! | TCTTTGGCTTATCTTTTACT+TGG | - | chr8_1:36050019-36050038 | Msa1191500:intron | 30.0% |
| !! | ATTTTAATGCTACTGGTACT+AGG | - | chr8_1:36050176-36050195 | Msa1191500:intron | 30.0% |
| GCCTATAGGAATTACTATAT+GGG | - | chr8_1:36050198-36050217 | Msa1191500:intron | 30.0% | |
| ! | TATCTAAAGTTACGGTTCTT+GGG | - | chr8_1:36050323-36050342 | Msa1191500:intron | 30.0% |
| !! | TTTGAGCTTTTTGAGCATTT+GGG | - | chr8_1:36050373-36050392 | Msa1191500:intron | 30.0% |
| ! | GAAACATCAATGACTTTTCT+GGG | - | chr8_1:36050395-36050414 | Msa1191500:intron | 30.0% |
| AATGTAAACAACACAACCAT+GGG | + | chr8_1:36050652-36050671 | None:intergenic | 30.0% | |
| AAATGTAAACAACACAACCA+TGG | + | chr8_1:36050653-36050672 | None:intergenic | 30.0% | |
| GTTTGTGGTTTCTATAAATG+TGG | - | chr8_1:36050841-36050860 | Msa1191500:CDS | 30.0% | |
| TAACTCACATATCTTCTACA+AGG | + | chr8_1:36050885-36050904 | None:intergenic | 30.0% | |
| TTGTAGAAGATATGTGAGTT+AGG | - | chr8_1:36050884-36050903 | Msa1191500:intron | 30.0% | |
| TGTTTATTTGGATGTAGACA+AGG | - | chr8_1:36050942-36050961 | Msa1191500:intron | 30.0% | |
| !! | TCATGAATGGTGTTATTAAG+AGG | - | chr8_1:36051395-36051414 | Msa1191500:intron | 30.0% |
| !! | CATGAATGGTGTTATTAAGA+GGG | - | chr8_1:36051396-36051415 | Msa1191500:intron | 30.0% |
| ACAACTAACATAACTAGCAA+TGG | + | chr8_1:36051475-36051494 | None:intergenic | 30.0% | |
| TGTAAACTCTTAGATGAACT+AGG | - | chr8_1:36051644-36051663 | Msa1191500:intron | 30.0% | |
| AATACAATAGAAACCCATCA+TGG | + | chr8_1:36051777-36051796 | None:intergenic | 30.0% | |
| AGGTTTATTACTAGAAAAGC+AGG | - | chr8_1:36051811-36051830 | Msa1191500:CDS | 30.0% | |
| GGTTTATTACTAGAAAAGCA+GGG | - | chr8_1:36051812-36051831 | Msa1191500:CDS | 30.0% | |
| ! | AAATAAGGCATTTGGTCAAA+AGG | + | chr8_1:36051852-36051871 | None:intergenic | 30.0% |
| ! | AGGCAGAGAAATTTTGTAAA+CGG | + | chr8_1:36051927-36051946 | None:intergenic | 30.0% |
| TATCGTTTGTGAAGAACTTT+AGG | - | chr8_1:36051952-36051971 | Msa1191500:intron | 30.0% | |
| TGAAATGAATCAAATGATGG+AGG | + | chr8_1:36052156-36052175 | None:intergenic | 30.0% | |
| ATCATCTCCAAATGTAAGAT+CGG | + | chr8_1:36052417-36052436 | None:intergenic | 30.0% | |
| TACATTTGGAGATGATATTG+AGG | - | chr8_1:36052421-36052440 | Msa1191500:CDS | 30.0% | |
| !! | GATGATGGATTCAATTAGAC+CGG | + | chr8_1:36049633-36049652 | None:intergenic | 35.0% |
| ! | TTTGGGAAAGTACGGATTTA+GGG | + | chr8_1:36049786-36049805 | None:intergenic | 35.0% |
| !! | TTTTGGGAAAGTACGGATTT+AGG | + | chr8_1:36049787-36049806 | None:intergenic | 35.0% |
| TAAATCCGTACTTTCCCAAA+AGG | - | chr8_1:36049786-36049805 | Msa1191500:intron | 35.0% | |
| ! | TTTTGTGATCCTAATCTCCA+AGG | - | chr8_1:36049905-36049924 | Msa1191500:intron | 35.0% |
| ! | ATCAAAGGTTGCATTTTTCC+GGG | + | chr8_1:36049980-36049999 | None:intergenic | 35.0% |
| ! | GATCAAAGGTTGCATTTTTC+CGG | + | chr8_1:36049981-36050000 | None:intergenic | 35.0% |
| AAAGCATAAAGGGTGATCAA+AGG | + | chr8_1:36049995-36050014 | None:intergenic | 35.0% | |
| !! | TCTTCACTTTTGGAAAGAGA+AGG | - | chr8_1:36050063-36050082 | Msa1191500:intron | 35.0% |
| GGCCTATAGGAATTACTATA+TGG | - | chr8_1:36050197-36050216 | Msa1191500:intron | 35.0% | |
| GCCCATATAGTAATTCCTAT+AGG | + | chr8_1:36050202-36050221 | None:intergenic | 35.0% | |
| !! | CTTTTGTTGGTTGTGTCTAT+GGG | - | chr8_1:36050262-36050281 | Msa1191500:intron | 35.0% |
| ! | GGGTGTTGTATCTAAAGTTA+CGG | - | chr8_1:36050315-36050334 | Msa1191500:intron | 35.0% |
| ! | GTATCTAAAGTTACGGTTCT+TGG | - | chr8_1:36050322-36050341 | Msa1191500:intron | 35.0% |
| ! | ATCTAAAGTTACGGTTCTTG+GGG | - | chr8_1:36050324-36050343 | Msa1191500:intron | 35.0% |
| !! | GTTTGAGCTTTTTGAGCATT+TGG | - | chr8_1:36050372-36050391 | Msa1191500:intron | 35.0% |
| ! | GGAAACATCAATGACTTTTC+TGG | - | chr8_1:36050394-36050413 | Msa1191500:intron | 35.0% |
| ATAGAATGAAGCATGAGTCA+AGG | + | chr8_1:36050456-36050475 | None:intergenic | 35.0% | |
| TTGACTCATGCTTCATTCTA+TGG | - | chr8_1:36050455-36050474 | Msa1191500:intron | 35.0% | |
| !!! | TTTCTCCAAGGTTTTAGACA+AGG | + | chr8_1:36050491-36050510 | None:intergenic | 35.0% |
| TGATTGTAGTGAATCTGCAT+CGG | - | chr8_1:36050596-36050615 | Msa1191500:intron | 35.0% | |
| TCTTCTACAAGGTCACAAAA+AGG | + | chr8_1:36050874-36050893 | None:intergenic | 35.0% | |
| AAAATGCTTGGATACTTCTC+GGG | + | chr8_1:36051129-36051148 | None:intergenic | 35.0% | |
| GAAAATGCTTGGATACTTCT+CGG | + | chr8_1:36051130-36051149 | None:intergenic | 35.0% | |
| GCAATAGAGTATATGAAAGC+AGG | + | chr8_1:36051312-36051331 | None:intergenic | 35.0% | |
| GCTTTCATATACTCTATTGC+TGG | - | chr8_1:36051312-36051331 | Msa1191500:intron | 35.0% | |
| CATAAAGGACATACCTAGTA+GGG | + | chr8_1:36051369-36051388 | None:intergenic | 35.0% | |
| CTACTAGGTATGTCCTTTAT+GGG | - | chr8_1:36051368-36051387 | Msa1191500:intron | 35.0% | |
| TACTAGGTATGTCCTTTATG+GGG | - | chr8_1:36051369-36051388 | Msa1191500:intron | 35.0% | |
| GCAATTTATACTGCACACTT+TGG | - | chr8_1:36051574-36051593 | Msa1191500:CDS | 35.0% | |
| ATTTATACTGCACACTTTGG+TGG | - | chr8_1:36051577-36051596 | Msa1191500:CDS | 35.0% | |
| ACTCTTAGATGAACTAGGAT+AGG | - | chr8_1:36051649-36051668 | Msa1191500:intron | 35.0% | |
| TCTTTATACCTTTCTTGCGA+AGG | - | chr8_1:36051715-36051734 | Msa1191500:CDS | 35.0% | |
| AATAATTGCCTTCGCAAGAA+AGG | + | chr8_1:36051726-36051745 | None:intergenic | 35.0% | |
| ! | AAACGGTATTTGCTGACAAT+TGG | + | chr8_1:36051910-36051929 | None:intergenic | 35.0% |
| TCTTCACAAACGATACGTAT+AGG | + | chr8_1:36051947-36051966 | None:intergenic | 35.0% | |
| !! | TATACTAGTCTCTAGCCTTA+TGG | - | chr8_1:36052017-36052036 | Msa1191500:CDS | 35.0% |
| TCTTCTCAAGATTCACCATA+AGG | + | chr8_1:36052035-36052054 | None:intergenic | 35.0% | |
| TTGCCAATTTAACCCAAAAG+TGG | - | chr8_1:36052072-36052091 | Msa1191500:CDS | 35.0% | |
| !!! | ATGCCACTTTTGGGTTAAAT+TGG | + | chr8_1:36052078-36052097 | None:intergenic | 35.0% |
| AATTTAACCCAAAAGTGGCA+TGG | - | chr8_1:36052077-36052096 | Msa1191500:CDS | 35.0% | |
| !!! | AGTTTTTCCATGCCACTTTT+GGG | + | chr8_1:36052087-36052106 | None:intergenic | 35.0% |
| AGTTACTAATGCAACTTCTC+AGG | + | chr8_1:36052117-36052136 | None:intergenic | 35.0% | |
| TCTCTAATTCTCCTGATTCA+CGG | - | chr8_1:36052181-36052200 | Msa1191500:intron | 35.0% | |
| CCAGCAAAAACAAAAAAGGT+GGG | + | chr8_1:36052221-36052240 | None:intergenic | 35.0% | |
| ACCAGCAAAAACAAAAAAGG+TGG | + | chr8_1:36052222-36052241 | None:intergenic | 35.0% | |
| GACACCAGCAAAAACAAAAA+AGG | + | chr8_1:36052225-36052244 | None:intergenic | 35.0% | |
| TTCTAGATATGCATACCTAG+AGG | - | chr8_1:36052280-36052299 | Msa1191500:CDS | 35.0% | |
| TCTAGATATGCATACCTAGA+GGG | - | chr8_1:36052281-36052300 | Msa1191500:CDS | 35.0% | |
| ! | ATCGAAGCGTTAACGTTGTT+TGG | + | chr8_1:36049449-36049468 | None:intergenic | 40.0% |
| ! | AGGGTTGTTTGGAGTAGTAA+TGG | + | chr8_1:36049472-36049491 | None:intergenic | 40.0% |
| !! | GGAAGAAGAAAGCATTTGAG+CGG | + | chr8_1:36049502-36049521 | None:intergenic | 40.0% |
| AATGCTTTCTTCTTCCATGC+CGG | - | chr8_1:36049506-36049525 | Msa1191500:CDS | 40.0% | |
| ! | TGAAGGAGATGGATTCGAAA+CGG | + | chr8_1:36049562-36049581 | None:intergenic | 40.0% |
| ! | ATCTTTGACTTCGAGGATGA+TGG | + | chr8_1:36049648-36049667 | None:intergenic | 40.0% |
| GTCAAAGATCGTAACCGTAT+CGG | - | chr8_1:36049659-36049678 | Msa1191500:intron | 40.0% | |
| ! | TTGGGAAAGTACGGATTTAG+GGG | + | chr8_1:36049785-36049804 | None:intergenic | 40.0% |
| !! | TTGAGCCTTTTGGGAAAGTA+CGG | + | chr8_1:36049794-36049813 | None:intergenic | 40.0% |
| AACAGTTCTACCAGTAACAG+TGG | + | chr8_1:36049933-36049952 | None:intergenic | 40.0% | |
| CTGTTACTGGTAGAACTGTT+TGG | - | chr8_1:36049933-36049952 | Msa1191500:intron | 40.0% | |
| ACTGTTTGGAGAAACCCTAA+TGG | - | chr8_1:36049947-36049966 | Msa1191500:intron | 40.0% | |
| AACCCTAATGGTTATCTTCC+CGG | - | chr8_1:36049959-36049978 | Msa1191500:intron | 40.0% | |
| TTCCGGGAAGATAACCATTA+GGG | + | chr8_1:36049964-36049983 | None:intergenic | 40.0% | |
| TTTCCGGGAAGATAACCATT+AGG | + | chr8_1:36049965-36049984 | None:intergenic | 40.0% | |
| ! | GGCTTATCTTTTACTTGGTC+TGG | - | chr8_1:36050024-36050043 | Msa1191500:intron | 40.0% |
| ! | ATCTTTTACTTGGTCTGGCA+TGG | - | chr8_1:36050029-36050048 | Msa1191500:intron | 40.0% |
| AACCATTCCAAGAGCAATGA+CGG | + | chr8_1:36050125-36050144 | None:intergenic | 40.0% | |
| CTGTTAAGAAGACGCTTTCA+AGG | - | chr8_1:36050236-36050255 | Msa1191500:intron | 40.0% | |
| !!! | GCTTTCAAGGTTGCTTTTGT+TGG | - | chr8_1:36050249-36050268 | Msa1191500:intron | 40.0% |
| !! | GCTTTTGTTGGTTGTGTCTA+TGG | - | chr8_1:36050261-36050280 | Msa1191500:intron | 40.0% |
| TTGGTTGTGTCTATGGGATA+TGG | - | chr8_1:36050268-36050287 | Msa1191500:intron | 40.0% | |
| !! | CTATGGGATATGGTGTTGTT+AGG | - | chr8_1:36050278-36050297 | Msa1191500:intron | 40.0% |
| ! | TCTAAAGTTACGGTTCTTGG+GGG | - | chr8_1:36050325-36050344 | Msa1191500:intron | 40.0% |
| TGGGAAATCTAAACTGCTGT+TGG | - | chr8_1:36050414-36050433 | Msa1191500:intron | 40.0% | |
| ! | CTCTTCCTTGTCTAAAACCT+TGG | - | chr8_1:36050483-36050502 | Msa1191500:CDS | 40.0% |
| TAAAACCTTGGAGAAACTGC+AGG | - | chr8_1:36050495-36050514 | Msa1191500:CDS | 40.0% | |
| CATAACCCAACAGAGATTAG+AGG | + | chr8_1:36050563-36050582 | None:intergenic | 40.0% | |
| ATCGGTCCTTTATGCTAGAA+TGG | - | chr8_1:36050614-36050633 | Msa1191500:intron | 40.0% | |
| GTGTAGCCATTCTAGCATAA+AGG | + | chr8_1:36050623-36050642 | None:intergenic | 40.0% | |
| GGGTTACTTAGTAAGGTTTG+TGG | - | chr8_1:36050826-36050845 | Msa1191500:CDS | 40.0% | |
| GATGTAGACAAGGAGAAACT+TGG | - | chr8_1:36050952-36050971 | Msa1191500:intron | 40.0% | |
| AAGGAGAAACTTGGCTAAAC+TGG | - | chr8_1:36050961-36050980 | Msa1191500:intron | 40.0% | |
| AAATGCTTGGATACTTCTCG+GGG | + | chr8_1:36051128-36051147 | None:intergenic | 40.0% | |
| ATTTGCCACAGCTCACTTAA+AGG | + | chr8_1:36051262-36051281 | None:intergenic | 40.0% | |
| CTTGGATTATTCCCACTTTC+TGG | - | chr8_1:36051284-36051303 | Msa1191500:intron | 40.0% | |
| TGCTGGTGATATGTGTTCTT+TGG | - | chr8_1:36051329-36051348 | Msa1191500:intron | 40.0% | |
| GCTGGTGATATGTGTTCTTT+GGG | - | chr8_1:36051330-36051349 | Msa1191500:intron | 40.0% | |
| CCATAAAGGACATACCTAGT+AGG | + | chr8_1:36051370-36051389 | None:intergenic | 40.0% | |
| CCTACTAGGTATGTCCTTTA+TGG | - | chr8_1:36051367-36051386 | Msa1191500:intron | 40.0% | |
| CATTCATGAAGACCCCATAA+AGG | + | chr8_1:36051384-36051403 | None:intergenic | 40.0% | |
| CTTTATGGGGTCTTCATGAA+TGG | - | chr8_1:36051382-36051401 | Msa1191500:intron | 40.0% | |
| CTGACAATTGGACTCAAAAG+TGG | + | chr8_1:36051898-36051917 | None:intergenic | 40.0% | |
| !!! | GAGTTTTTCCATGCCACTTT+TGG | + | chr8_1:36052088-36052107 | None:intergenic | 40.0% |
| AAAGTGGCATGGAAAAACTC+AGG | - | chr8_1:36052088-36052107 | Msa1191500:CDS | 40.0% | |
| CTCTAATTCTCCTGATTCAC+GGG | - | chr8_1:36052182-36052201 | Msa1191500:intron | 40.0% | |
| TCTAATTCTCCTGATTCACG+GGG | - | chr8_1:36052183-36052202 | Msa1191500:intron | 40.0% | |
| !!! | CCCACCTTTTTTGTTTTTGC+TGG | - | chr8_1:36052218-36052237 | Msa1191500:CDS | 40.0% |
| ATCTCCAAATGTAAGATCGG+TGG | + | chr8_1:36052414-36052433 | None:intergenic | 40.0% | |
| TTCGAAACGGATGAAGGAAG+AGG | + | chr8_1:36049549-36049568 | None:intergenic | 45.0% | |
| ! | GATGGATTCGAAACGGATGA+AGG | + | chr8_1:36049555-36049574 | None:intergenic | 45.0% |
| ! | GGTTACGATCTTTGACTTCG+AGG | + | chr8_1:36049655-36049674 | None:intergenic | 45.0% |
| AAAGATCGTAACCGTATCGG+TGG | - | chr8_1:36049662-36049681 | Msa1191500:intron | 45.0% | |
| ! | TGGGAAAGTACGGATTTAGG+GGG | + | chr8_1:36049784-36049803 | None:intergenic | 45.0% |
| ACAGTGGTACCTTGGAGATT+AGG | + | chr8_1:36049917-36049936 | None:intergenic | 45.0% | |
| TACCAGTAACAGTGGTACCT+TGG | + | chr8_1:36049925-36049944 | None:intergenic | 45.0% | |
| ATTACTGCCGTCATTGCTCT+TGG | - | chr8_1:36050115-36050134 | Msa1191500:intron | 45.0% | |
| TGCTCTTGGAATGGTTGAGA+TGG | - | chr8_1:36050129-36050148 | Msa1191500:intron | 45.0% | |
| ! | GAATGGTTGAGATGGCGTTT+TGG | - | chr8_1:36050137-36050156 | Msa1191500:intron | 45.0% |
| CTAAAGTTACGGTTCTTGGG+GGG | - | chr8_1:36050326-36050345 | Msa1191500:intron | 45.0% | |
| CATGAGTCAAGGCAAACAAC+AGG | + | chr8_1:36050445-36050464 | None:intergenic | 45.0% | |
| AATTGCCTGCAGTTTCTCCA+AGG | + | chr8_1:36050503-36050522 | None:intergenic | 45.0% | |
| CACTGCCTCTAATCTCTGTT+GGG | - | chr8_1:36050555-36050574 | Msa1191500:CDS | 45.0% | |
| ACAACACAACCATGGGAGTT+CGG | + | chr8_1:36050645-36050664 | None:intergenic | 45.0% | |
| TAGGACGGGGTTACTTAGTA+AGG | - | chr8_1:36050819-36050838 | Msa1191500:CDS | 45.0% | |
| CTACTGTCCATTGCATGGAT+TGG | - | chr8_1:36051025-36051044 | Msa1191500:CDS | 45.0% | |
| CTCAAAGCCAATCCATGCAA+TGG | + | chr8_1:36051035-36051054 | None:intergenic | 45.0% | |
| !! | CATTGCATGGATTGGCTTTG+AGG | - | chr8_1:36051033-36051052 | Msa1191500:CDS | 45.0% |
| AATGCTTGGATACTTCTCGG+GGG | + | chr8_1:36051127-36051146 | None:intergenic | 45.0% | |
| CAGTTGCATTGAAGTACAGC+TGG | + | chr8_1:36051237-36051256 | None:intergenic | 45.0% | |
| CTGATCCTTTAAGTGAGCTG+TGG | - | chr8_1:36051254-36051273 | Msa1191500:intron | 45.0% | |
| TACCTAGTAGGGTTACGAGA+AGG | + | chr8_1:36051358-36051377 | None:intergenic | 45.0% | |
| ! | CTGCACACTTTGGTGGTTAT+TGG | - | chr8_1:36051584-36051603 | Msa1191500:CDS | 45.0% |
| ACTGCTACATCATGCCATGA+TGG | - | chr8_1:36051760-36051779 | Msa1191500:CDS | 45.0% | |
| CTGCTACATCATGCCATGAT+GGG | - | chr8_1:36051761-36051780 | Msa1191500:CDS | 45.0% | |
| ACATTTAGTCCCCGTGAATC+AGG | + | chr8_1:36052195-36052214 | None:intergenic | 45.0% | |
| CAAAGTCATCTGTTCCCTCT+AGG | + | chr8_1:36052298-36052317 | None:intergenic | 45.0% | |
| AACAGATGACTTTGACGAGG+AGG | - | chr8_1:36052304-36052323 | Msa1191500:CDS | 45.0% | |
| ACAGATGACTTTGACGAGGA+GGG | - | chr8_1:36052305-36052324 | Msa1191500:CDS | 45.0% | |
| AGCAGTGTAGCAAAGATGAC+TGG | - | chr8_1:36052341-36052360 | Msa1191500:CDS | 45.0% | |
| AGCAAAGATGACTGGAGATG+TGG | - | chr8_1:36052349-36052368 | Msa1191500:CDS | 45.0% | |
| CTTGAGCGGAAGGAAAGAAT+AGG | - | chr8_1:36052380-36052399 | Msa1191500:CDS | 45.0% | |
| AGTGCCACCGATCTTACATT+TGG | - | chr8_1:36052407-36052426 | Msa1191500:CDS | 45.0% | |
| GCATTTGAGCGGTGAGTGAA+GGG | + | chr8_1:36049491-36049510 | None:intergenic | 50.0% | |
| AGCATTTGAGCGGTGAGTGA+AGG | + | chr8_1:36049492-36049511 | None:intergenic | 50.0% | |
| ! | TTTAGGGCGAGTGAAGGAGA+TGG | + | chr8_1:36049573-36049592 | None:intergenic | 50.0% |
| !! | GGATGATGGCGGAGTGTTTA+GGG | + | chr8_1:36049589-36049608 | None:intergenic | 50.0% |
| !! | TGGATGATGGCGGAGTGTTT+AGG | + | chr8_1:36049590-36049609 | None:intergenic | 50.0% |
| AAACACTCCGCCATCATCCA+CGG | - | chr8_1:36049590-36049609 | Msa1191500:intron | 50.0% | |
| ! | CTCCAAGGTACCACTGTTAC+TGG | - | chr8_1:36049920-36049939 | Msa1191500:intron | 50.0% |
| TGCCGTCATTGCTCTTGGAA+TGG | - | chr8_1:36050120-36050139 | Msa1191500:intron | 50.0% | |
| GCTACTGGTACTAGGCCTAT+AGG | - | chr8_1:36050184-36050203 | Msa1191500:intron | 50.0% | |
| CCAACAGAGATTAGAGGCAG+TGG | + | chr8_1:36050557-36050576 | None:intergenic | 50.0% | |
| CCACTGCCTCTAATCTCTGT+TGG | - | chr8_1:36050554-36050573 | Msa1191500:CDS | 50.0% | |
| CAGTAGCACAGACACTGCAA+GGG | + | chr8_1:36051011-36051030 | None:intergenic | 50.0% | |
| ACAGTAGCACAGACACTGCA+AGG | + | chr8_1:36051012-36051031 | None:intergenic | 50.0% | |
| ! | CTGTGCTACTGTCCATTGCA+TGG | - | chr8_1:36051020-36051039 | Msa1191500:CDS | 50.0% |
| GTGAGCTGTGGCAAATTGCT+TGG | - | chr8_1:36051266-36051285 | Msa1191500:intron | 50.0% | |
| GAAAGCAGGCACCAGAAAGT+GGG | + | chr8_1:36051298-36051317 | None:intergenic | 50.0% | |
| TGAAAGCAGGCACCAGAAAG+TGG | + | chr8_1:36051299-36051318 | None:intergenic | 50.0% | |
| CTCCTTCTCGTAACCCTACT+AGG | - | chr8_1:36051353-36051372 | Msa1191500:intron | 50.0% | |
| GGACTCAAAAGTGGCACGAT+GGG | + | chr8_1:36051889-36051908 | None:intergenic | 50.0% | |
| TGGACTCAAAAGTGGCACGA+TGG | + | chr8_1:36051890-36051909 | None:intergenic | 50.0% | |
| GGGAACAGATGACTTTGACG+AGG | - | chr8_1:36052301-36052320 | Msa1191500:CDS | 50.0% | |
| ATGTGGCATCCAAGCTTGAG+CGG | - | chr8_1:36052366-36052385 | Msa1191500:CDS | 50.0% | |
| TCTTTCCTTCCGCTCAAGCT+TGG | + | chr8_1:36052378-36052397 | None:intergenic | 50.0% | |
| GCGGTGAGTGAAGGGTTGTT+TGG | + | chr8_1:36049483-36049502 | None:intergenic | 55.0% | |
| GGAGAAGAGAGCTTCAGCAC+CGG | + | chr8_1:36049528-36049547 | None:intergenic | 55.0% | |
| ! | GGAGTGTTTAGGGCGAGTGA+AGG | + | chr8_1:36049579-36049598 | None:intergenic | 55.0% |
| ! | CATTTGGCCGTGGATGATGG+CGG | + | chr8_1:36049600-36049619 | None:intergenic | 55.0% |
| CTGCATTTGGCCGTGGATGA+TGG | + | chr8_1:36049603-36049622 | None:intergenic | 55.0% | |
| TGTTCTGCTGCATTTGGCCG+TGG | + | chr8_1:36049610-36049629 | None:intergenic | 55.0% | |
| GGCCAAATGCAGCAGAACAC+CGG | - | chr8_1:36049611-36049630 | Msa1191500:intron | 55.0% | |
| GACCGGTGTTCTGCTGCATT+TGG | + | chr8_1:36049616-36049635 | None:intergenic | 55.0% | |
| ATGGCTACACCGAACTCCCA+TGG | - | chr8_1:36050633-36050652 | Msa1191500:intron | 55.0% | |
| ! | AGATGGGTTTCAACCCCCGT+TGG | - | chr8_1:36050786-36050805 | Msa1191500:intron | 55.0% |
| ! | GATGGGTTTCAACCCCCGTT+GGG | - | chr8_1:36050787-36050806 | Msa1191500:intron | 55.0% |
| ATGGGTTTCAACCCCCGTTG+GGG | - | chr8_1:36050788-36050807 | Msa1191500:intron | 55.0% | |
| !! | AGAGAGCTTCAGCACCGGCA+TGG | + | chr8_1:36049523-36049542 | None:intergenic | 60.0% |
| TGTTAGGCCAACGCTCGTCG+AGG | - | chr8_1:36050294-36050313 | Msa1191500:intron | 60.0% | |
| GTTAGGCCAACGCTCGTCGA+GGG | - | chr8_1:36050295-36050314 | Msa1191500:intron | 60.0% | |
| ACAACACCCTCGACGAGCGT+TGG | + | chr8_1:36050304-36050323 | None:intergenic | 60.0% | |
| TGGGTTTCAACCCCCGTTGG+GGG | - | chr8_1:36050789-36050808 | Msa1191500:intron | 60.0% | |
| TTTCAACCCCCGTTGGGGGT+TGG | - | chr8_1:36050793-36050812 | Msa1191500:intron | 60.0% | |
| TTCAACCCCCGTTGGGGGTT+GGG | - | chr8_1:36050794-36050813 | Msa1191500:intron | 60.0% | |
| GGCATCCAAGCTTGAGCGGA+AGG | - | chr8_1:36052370-36052389 | Msa1191500:CDS | 60.0% | |
| TCAACCCCCGTTGGGGGTTG+GGG | - | chr8_1:36050795-36050814 | Msa1191500:CDS | 65.0% | |
| TCCTACCCCCAACCCCCAAC+GGG | + | chr8_1:36050804-36050823 | None:intergenic | 65.0% | |
| GTCCTACCCCCAACCCCCAA+CGG | + | chr8_1:36050805-36050824 | None:intergenic | 65.0% | |
| GTTGGGGGTTGGGGGTAGGA+CGG | - | chr8_1:36050804-36050823 | Msa1191500:CDS | 65.0% | |
| TTGGGGGTTGGGGGTAGGAC+GGG | - | chr8_1:36050805-36050824 | Msa1191500:CDS | 65.0% | |
| CAACCCCCGTTGGGGGTTGG+GGG | - | chr8_1:36050796-36050815 | Msa1191500:CDS | 70.0% | |
| CTACCCCCAACCCCCAACGG+GGG | + | chr8_1:36050802-36050821 | None:intergenic | 70.0% | |
| CCTACCCCCAACCCCCAACG+GGG | + | chr8_1:36050803-36050822 | None:intergenic | 70.0% | |
| TGGGGGTTGGGGGTAGGACG+GGG | - | chr8_1:36050806-36050825 | Msa1191500:CDS | 70.0% | |
| CCCCGTTGGGGGTTGGGGGT+AGG | - | chr8_1:36050800-36050819 | Msa1191500:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 36049389 | 36052460 | 36049389 | ID=Msa1191500;Name=Msa1191500 |
| chr8_1 | mRNA | 36049389 | 36052460 | 36049389 | ID=Msa1191500-mRNA-1;Parent=Msa1191500;Name=Msa1191500-mRNA-1;_AED=0.09;_eAED=0.12;_QI=0|0|0|1|0.28|0.37|8|0|469 |
| chr8_1 | exon | 36052217 | 36052460 | 36052217 | ID=Msa1191500-mRNA-1:exon:11912;Parent=Msa1191500-mRNA-1 |
| chr8_1 | exon | 36051968 | 36052189 | 36051968 | ID=Msa1191500-mRNA-1:exon:11911;Parent=Msa1191500-mRNA-1 |
| chr8_1 | exon | 36051682 | 36051922 | 36051682 | ID=Msa1191500-mRNA-1:exon:11910;Parent=Msa1191500-mRNA-1 |
| chr8_1 | exon | 36051405 | 36051651 | 36051405 | ID=Msa1191500-mRNA-1:exon:11909;Parent=Msa1191500-mRNA-1 |
| chr8_1 | exon | 36051014 | 36051061 | 36051014 | ID=Msa1191500-mRNA-1:exon:11908;Parent=Msa1191500-mRNA-1 |
| chr8_1 | exon | 36050795 | 36050890 | 36050795 | ID=Msa1191500-mRNA-1:exon:11907;Parent=Msa1191500-mRNA-1 |
| chr8_1 | exon | 36050475 | 36050611 | 36050475 | ID=Msa1191500-mRNA-1:exon:11906;Parent=Msa1191500-mRNA-1 |
| chr8_1 | exon | 36049389 | 36049563 | 36049389 | ID=Msa1191500-mRNA-1:exon:11905;Parent=Msa1191500-mRNA-1 |
| chr8_1 | CDS | 36052217 | 36052460 | 36052217 | ID=Msa1191500-mRNA-1:cds;Parent=Msa1191500-mRNA-1 |
| chr8_1 | CDS | 36051968 | 36052189 | 36051968 | ID=Msa1191500-mRNA-1:cds;Parent=Msa1191500-mRNA-1 |
| chr8_1 | CDS | 36051682 | 36051922 | 36051682 | ID=Msa1191500-mRNA-1:cds;Parent=Msa1191500-mRNA-1 |
| chr8_1 | CDS | 36051405 | 36051651 | 36051405 | ID=Msa1191500-mRNA-1:cds;Parent=Msa1191500-mRNA-1 |
| chr8_1 | CDS | 36051014 | 36051061 | 36051014 | ID=Msa1191500-mRNA-1:cds;Parent=Msa1191500-mRNA-1 |
| chr8_1 | CDS | 36050795 | 36050890 | 36050795 | ID=Msa1191500-mRNA-1:cds;Parent=Msa1191500-mRNA-1 |
| chr8_1 | CDS | 36050475 | 36050611 | 36050475 | ID=Msa1191500-mRNA-1:cds;Parent=Msa1191500-mRNA-1 |
| chr8_1 | CDS | 36049389 | 36049563 | 36049389 | ID=Msa1191500-mRNA-1:cds;Parent=Msa1191500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
