Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1192530 | AES92038.2 | 97.649 | 723 | 16 | 1 | 1 | 722 | 1 | 723 | 0.0 | 1456 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1192530 | sp|Q8H1E8|DRM3_ARATH | 38.970 | 757 | 364 | 16 | 2 | 718 | 11 | 709 | 9.19e-158 | 476 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003700 | Msa1192530 | 0.803806 | 2.924610e-49 | -8.615850e-47 |
Msa0134610 | Msa1192530 | 0.800294 | 1.542177e-48 | -8.615850e-47 |
Msa0146260 | Msa1192530 | 0.808867 | 2.507448e-50 | -8.615850e-47 |
Msa0226540 | Msa1192530 | 0.804819 | 1.798423e-49 | -8.615850e-47 |
Msa0462500 | Msa1192530 | 0.803070 | 4.154298e-49 | -8.615850e-47 |
Msa0475790 | Msa1192530 | 0.813110 | 3.020978e-51 | -8.615850e-47 |
Msa0255090 | Msa1192530 | 0.803254 | 3.805618e-49 | -8.615850e-47 |
Msa1192530 | Msa1204340 | 0.905376 | 4.584199e-80 | -8.615850e-47 |
Msa1192530 | Msa1333100 | 0.840471 | 8.524687e-58 | -8.615850e-47 |
Msa1192530 | Msa1374040 | 0.814530 | 1.470205e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1192530 | MtrunA17_Chr4g0069001 | 97.649 | 723 | 16 | 1 | 1 | 722 | 87 | 809 | 0.0 | 1454 |
Msa1192530 | MtrunA17_Chr5g0403561 | 43.505 | 331 | 181 | 4 | 395 | 721 | 260 | 588 | 4.04e-91 | 296 |
Msa1192530 | MtrunA17_Chr6g0449921 | 44.411 | 331 | 178 | 4 | 395 | 721 | 258 | 586 | 5.25e-91 | 296 |
Msa1192530 | MtrunA17_Chr3g0080571 | 43.505 | 331 | 181 | 4 | 395 | 721 | 279 | 607 | 3.50e-90 | 294 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1192530 | AT3G17310.1 | 38.970 | 757 | 364 | 16 | 2 | 718 | 11 | 709 | 9.34e-159 | 476 |
Msa1192530 | AT3G17310.2 | 38.970 | 757 | 364 | 16 | 2 | 718 | 11 | 709 | 9.34e-159 | 476 |
Msa1192530 | AT3G17310.3 | 42.114 | 577 | 285 | 13 | 182 | 718 | 23 | 590 | 7.62e-137 | 416 |
Msa1192530 | AT5G14620.1 | 46.789 | 327 | 168 | 4 | 395 | 717 | 297 | 621 | 4.55e-91 | 297 |
Msa1192530 | AT5G15380.1 | 44.099 | 322 | 176 | 3 | 397 | 716 | 297 | 616 | 9.39e-85 | 280 |
Find 173 sgRNAs with CRISPR-Local
Find 494 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCTGGTCCTTCTTATTCT+TGG | 0.146437 | 8_1:-38387960 | Msa1192530:CDS |
ACTCTAGTCTTGATCCTTAT+TGG | 0.153514 | 8_1:-38387714 | Msa1192530:CDS |
TGAGCATTGGGAAAGAAATT+TGG | 0.167969 | 8_1:+38392522 | None:intergenic |
GTAGATATTTAGATGATTTC+AGG | 0.184295 | 8_1:-38386438 | Msa1192530:three_prime_UTR |
TGACGTAAAACCAGGCTTTA+TGG | 0.195385 | 8_1:-38387785 | Msa1192530:CDS |
GAGAATCTAATCAATAATTT+TGG | 0.200516 | 8_1:-38386815 | Msa1192530:CDS |
TGAGCAACTCTTTGGAATTA+TGG | 0.222568 | 8_1:-38388857 | Msa1192530:CDS |
GGAAGGGCTCTTGCCGACTC+TGG | 0.243130 | 8_1:-38387292 | Msa1192530:CDS |
ACCATTTCTTCCACCCAATA+AGG | 0.257946 | 8_1:+38387700 | None:intergenic |
AACGCTTCAGTTGTTTGAAA+TGG | 0.264702 | 8_1:-38388830 | Msa1192530:CDS |
AAAGTACGAGGATTCTTTAT+TGG | 0.278127 | 8_1:-38392995 | Msa1192530:CDS |
AGGAAAAGTGAAAGTGAAAC+AGG | 0.279267 | 8_1:+38393890 | None:intergenic |
AACTCCGTGTTCACAAATTC+AGG | 0.296850 | 8_1:+38387517 | None:intergenic |
GAGAAGTGGTGGCGCAGTTC+TGG | 0.308120 | 8_1:-38386896 | Msa1192530:CDS |
CTCTAGTCTTGATCCTTATT+GGG | 0.309389 | 8_1:-38387713 | Msa1192530:CDS |
AAGTTTGCAAGCTCTGAAAT+TGG | 0.311536 | 8_1:+38388522 | None:intergenic |
ATATTCACATACCAAGTTTA+CGG | 0.311744 | 8_1:+38390948 | None:intergenic |
AGCTCTGAAATTGGAACATC+TGG | 0.311776 | 8_1:+38388531 | None:intergenic |
GAGCATTGGGAAAGAAATTT+GGG | 0.320898 | 8_1:+38392523 | None:intergenic |
AACTGTAACTATTGTGAAAC+TGG | 0.323997 | 8_1:-38387343 | Msa1192530:CDS |
ATTAGCAATGAGCAACTCTT+TGG | 0.331436 | 8_1:-38388865 | Msa1192530:CDS |
GAACACTTGGAGCTTATCTT+AGG | 0.331586 | 8_1:-38387169 | Msa1192530:CDS |
ATTTAAGAAAGTACCTCTTT+TGG | 0.331834 | 8_1:+38391556 | None:intergenic |
TCCTCAGCAGTTGATAAATT+AGG | 0.337137 | 8_1:-38388787 | Msa1192530:intron |
CGAAAGCTTATTTGATGATA+AGG | 0.344802 | 8_1:-38391608 | Msa1192530:CDS |
TGAGTATGTGATGGAATATA+AGG | 0.354316 | 8_1:-38388475 | Msa1192530:intron |
GCGGCCACCATTTCTTTGTC+CGG | 0.355105 | 8_1:+38387389 | None:intergenic |
TCCCTTGAAAGAGCAGTATA+AGG | 0.369565 | 8_1:+38393313 | None:intergenic |
TCCAAGTGTTCGGGTTCTAT+TGG | 0.370632 | 8_1:+38387181 | None:intergenic |
ATAACCTTCTATTCTGTTCA+AGG | 0.378544 | 8_1:+38387486 | None:intergenic |
GAATCCTCGTACTTTGCTTC+CGG | 0.378724 | 8_1:+38393003 | None:intergenic |
CGAGGATTCTTTATTGGAAT+GGG | 0.382883 | 8_1:-38392989 | Msa1192530:CDS |
GAAGGGCTCTTGCCGACTCT+GGG | 0.385462 | 8_1:-38387291 | Msa1192530:CDS |
CACCTTATACTGCTCTTTCA+AGG | 0.387017 | 8_1:-38393315 | Msa1192530:CDS |
TCGGCCTTGAACAGAATAGA+AGG | 0.390848 | 8_1:-38387490 | Msa1192530:CDS |
TTATCATCATATTCATACTT+TGG | 0.391787 | 8_1:+38387742 | None:intergenic |
CAAAGAAATGGTGGCCGCCT+TGG | 0.394865 | 8_1:-38387384 | Msa1192530:CDS |
TAAGATAAGCTCCAAGTGTT+CGG | 0.397680 | 8_1:+38387171 | None:intergenic |
ACGCTTCAGTTGTTTGAAAT+GGG | 0.402332 | 8_1:-38388829 | Msa1192530:CDS |
CAGGTCAACTTAGGGGAAAC+TGG | 0.403855 | 8_1:-38387856 | Msa1192530:CDS |
TCCTCTTCTGGAGCGAGTGC+AGG | 0.406222 | 8_1:-38393871 | Msa1192530:five_prime_UTR |
TGATTGATCATGGAAACTTC+TGG | 0.406406 | 8_1:+38391580 | None:intergenic |
TGGTGACTCATCAGATTCTC+TGG | 0.409807 | 8_1:-38392580 | Msa1192530:CDS |
TCGATAGTCATAGGTGGCTT+TGG | 0.411332 | 8_1:+38387424 | None:intergenic |
CAGTCAAGGCAGGTCAACTT+AGG | 0.416868 | 8_1:-38387865 | Msa1192530:CDS |
GCCTTGACTGTGAAGGTTCA+TGG | 0.418064 | 8_1:+38387878 | None:intergenic |
CAAACATAACATATGACTCT+TGG | 0.424521 | 8_1:-38387573 | Msa1192530:CDS |
CGGCCACCATTTCTTTGTCC+GGG | 0.428659 | 8_1:+38387390 | None:intergenic |
AAAGAAATGGTGGCCGCCTT+GGG | 0.429022 | 8_1:-38387383 | Msa1192530:CDS |
AAGATAAGCTCCAAGTGTTC+GGG | 0.435267 | 8_1:+38387172 | None:intergenic |
AGAGATTCTCTTGAGATGTT+CGG | 0.439855 | 8_1:-38392782 | Msa1192530:intron |
TTTAATGTATACAGGTGAAA+TGG | 0.440766 | 8_1:-38393410 | Msa1192530:intron |
TTCTGGACAAACCGGGACTT+TGG | 0.442218 | 8_1:-38386879 | Msa1192530:CDS |
TTGTTTCCCTAGTATCCCTC+TGG | 0.442633 | 8_1:-38387976 | Msa1192530:intron |
ACCCTCTCCCCTCTCCGATC+AGG | 0.446441 | 8_1:-38393836 | Msa1192530:intron |
TGGCGCAGTTCTGGACAAAC+CGG | 0.447348 | 8_1:-38386887 | Msa1192530:CDS |
CAAATGTTATGTTCGAGAAA+AGG | 0.448764 | 8_1:-38390114 | Msa1192530:CDS |
ACGAGGATTCTTTATTGGAA+TGG | 0.452315 | 8_1:-38392990 | Msa1192530:CDS |
AACAGCAGAAAGACATTCTT+CGG | 0.452611 | 8_1:-38387252 | Msa1192530:CDS |
TCCTTATTGGGTGGAAGAAA+TGG | 0.453168 | 8_1:-38387701 | Msa1192530:CDS |
GAAACTGCTGCAAGTTCATC+CGG | 0.459685 | 8_1:-38393022 | Msa1192530:CDS |
GAAATGGCAGGTACTTCAAA+TGG | 0.459748 | 8_1:-38393394 | Msa1192530:CDS |
AGTCAAGGCAGGTCAACTTA+GGG | 0.459928 | 8_1:-38387864 | Msa1192530:CDS |
AAGTCTACCAGCTCAGGAAC+TGG | 0.461859 | 8_1:+38390197 | None:intergenic |
TAGATATTTAGATGATTTCA+GGG | 0.463443 | 8_1:-38386437 | Msa1192530:three_prime_UTR |
TCGGAGAGGGGAGAGGGTGG+AGG | 0.466304 | 8_1:+38393841 | None:intergenic |
CAATTCCCCGGACAAAGAAA+TGG | 0.471097 | 8_1:-38387396 | Msa1192530:CDS |
GAATTTGCAATCCGTAAACT+TGG | 0.475225 | 8_1:-38390959 | Msa1192530:intron |
GATATCCTAATGTATCTGTC+TGG | 0.476951 | 8_1:+38387074 | None:intergenic |
TGGAAAATGATAGAAATAAG+AGG | 0.479736 | 8_1:-38387765 | Msa1192530:CDS |
ACTTGATGAGGTCTGACAAT+TGG | 0.481963 | 8_1:+38386752 | None:intergenic |
TCCCAATGCTCATTCAAAAG+AGG | 0.483461 | 8_1:-38392511 | Msa1192530:intron |
ATTGCATCCTCGATAGTCAT+AGG | 0.484160 | 8_1:+38387415 | None:intergenic |
GGGAAACTGGCACTGGCGAA+AGG | 0.484897 | 8_1:-38387843 | Msa1192530:CDS |
GAAGTTGCACTTCACCGCCT+TGG | 0.486284 | 8_1:-38386977 | Msa1192530:CDS |
CATGATCAATCAACCAAAAG+AGG | 0.486994 | 8_1:-38391569 | Msa1192530:intron |
TCCAATAGAACCCGAACACT+TGG | 0.490251 | 8_1:-38387182 | Msa1192530:CDS |
GGAAACTGGCACTGGCGAAA+GGG | 0.493821 | 8_1:-38387842 | Msa1192530:CDS |
AGGGCTCTTGCCGACTCTGG+GGG | 0.496608 | 8_1:-38387289 | Msa1192530:CDS |
GGGGAATACCTGATCGGAGA+GGG | 0.500679 | 8_1:+38393828 | None:intergenic |
ATTGGAATGGGATTCTTGCC+CGG | 0.504717 | 8_1:-38392977 | Msa1192530:CDS |
AACTTCTTTCTTGAATCCCA+AGG | 0.510232 | 8_1:+38387367 | None:intergenic |
TATAACTTTATCAACAAGAC+CGG | 0.510372 | 8_1:+38392958 | None:intergenic |
TTCAATCTGAACCAAAGTCC+CGG | 0.511184 | 8_1:+38386868 | None:intergenic |
ACCTTATACTGCTCTTTCAA+GGG | 0.513019 | 8_1:-38393314 | Msa1192530:CDS |
TCAGTACGAGTGTGATTCAA+AGG | 0.513592 | 8_1:+38387142 | None:intergenic |
GAAGAACAAAGCGATATGTA+TGG | 0.516685 | 8_1:-38387931 | Msa1192530:CDS |
AAGATGAAGTCTACCAGCTC+AGG | 0.519697 | 8_1:+38390191 | None:intergenic |
AGCTTCCAGACAGATACATT+AGG | 0.521672 | 8_1:-38387079 | Msa1192530:CDS |
CTGACAATTGGCTGAGAGCA+TGG | 0.521901 | 8_1:+38386764 | None:intergenic |
GGGGAGAGGGTGGAGGCGCG+TGG | 0.528563 | 8_1:+38393848 | None:intergenic |
TTGTTAATGCTACAGACAAA+TGG | 0.531210 | 8_1:-38392600 | Msa1192530:intron |
GTCAGACCTCATCAAGTTGG+AGG | 0.531641 | 8_1:-38386746 | Msa1192530:CDS |
ACCTGATCGGAGAGGGGAGA+GGG | 0.535089 | 8_1:+38393835 | None:intergenic |
TACCTGATCGGAGAGGGGAG+AGG | 0.536435 | 8_1:+38393834 | None:intergenic |
GCCTGCACTCGCTCCAGAAG+AGG | 0.539337 | 8_1:+38393870 | None:intergenic |
GATAAAGTTATAGAAGAGAA+TGG | 0.542439 | 8_1:-38392947 | Msa1192530:intron |
ATGTGGAACCTGCTTTCTGT+TGG | 0.543734 | 8_1:+38387451 | None:intergenic |
AAACAGGGTTCGGTGCGTCT+AGG | 0.543756 | 8_1:+38393906 | None:intergenic |
GGAGAAATTCATCATCAGTA+AGG | 0.546193 | 8_1:+38390994 | None:intergenic |
AACTTAGGGGAAACTGGCAC+TGG | 0.550464 | 8_1:-38387850 | Msa1192530:CDS |
GCCATGAACCTTCACAGTCA+AGG | 0.552031 | 8_1:-38387879 | Msa1192530:CDS |
GACAACAGAGTCACTCCAGC+AGG | 0.553683 | 8_1:+38387025 | None:intergenic |
CATTAGAGAAACACAGAGAT+GGG | 0.554898 | 8_1:+38386471 | None:intergenic |
TTCCCCGATGACGTAAAACC+AGG | 0.555837 | 8_1:-38387793 | Msa1192530:CDS |
TGCAAATTCAACTTCCTCCA+CGG | 0.556320 | 8_1:+38390973 | None:intergenic |
TGATCGGAGAGGGGAGAGGG+TGG | 0.560320 | 8_1:+38393838 | None:intergenic |
TAAAGCGCCAGTTCCTGAGC+TGG | 0.563833 | 8_1:-38390204 | Msa1192530:CDS |
TGAACCTTCACAGTCAAGGC+AGG | 0.565747 | 8_1:-38387875 | Msa1192530:CDS |
ATTGTCAGACCTCATCAAGT+TGG | 0.567706 | 8_1:-38386749 | Msa1192530:CDS |
GTTTCTCTAATGTTAACTGT+TGG | 0.568325 | 8_1:-38386460 | Msa1192530:three_prime_UTR |
GACTCATCAGATTCTCTGGA+AGG | 0.569319 | 8_1:-38392576 | Msa1192530:CDS |
ACCTAATTTATCAACTGCTG+AGG | 0.571284 | 8_1:+38388786 | None:intergenic |
TCTTTGATCCAAGAATAAGA+AGG | 0.571878 | 8_1:+38387952 | None:intergenic |
GCAGGTACTTCAAATGGAAG+AGG | 0.572697 | 8_1:-38393388 | Msa1192530:CDS |
ACAATCTTCCAACAGAAAGC+AGG | 0.576524 | 8_1:-38387459 | Msa1192530:CDS |
AGTGAAAGTGAAACAGGGTT+CGG | 0.576797 | 8_1:+38393896 | None:intergenic |
GGGTAAGAGCTCTGTGCGAA+AGG | 0.578382 | 8_1:-38386670 | Msa1192530:CDS |
GGCCACCATTTCTTTGTCCG+GGG | 0.578470 | 8_1:+38387391 | None:intergenic |
AAGGGCTCTTGCCGACTCTG+GGG | 0.578816 | 8_1:-38387290 | Msa1192530:CDS |
TAGTCTTGATCCTTATTGGG+TGG | 0.580016 | 8_1:-38387710 | Msa1192530:CDS |
GGTTTGAATCTTGTGTGGAC+TGG | 0.583346 | 8_1:-38387220 | Msa1192530:CDS |
CAGTACGAGTGTGATTCAAA+GGG | 0.584543 | 8_1:+38387143 | None:intergenic |
GGCGCAGTTCTGGACAAACC+GGG | 0.584961 | 8_1:-38386886 | Msa1192530:CDS |
ATGTATACAGGTGAAATGGC+AGG | 0.586800 | 8_1:-38393406 | Msa1192530:intron |
ATGTTATGTTCGAGAAAAGG+AGG | 0.591403 | 8_1:-38390111 | Msa1192530:intron |
ATGGATTCTGATAAATGACC+AGG | 0.592207 | 8_1:+38386783 | None:intergenic |
ACATTAGAGAAACACAGAGA+TGG | 0.593034 | 8_1:+38386470 | None:intergenic |
AACTCTGTGATAGACTAGGA+AGG | 0.598049 | 8_1:-38387309 | Msa1192530:CDS |
TGGCACTGGCGAAAGGGTGA+AGG | 0.598779 | 8_1:-38387836 | Msa1192530:CDS |
TAAAATAAAAGCTCTCGTCT+CGG | 0.599228 | 8_1:-38386951 | Msa1192530:CDS |
GGAAAATTCTTGAGAAGTGG+TGG | 0.603929 | 8_1:-38386907 | Msa1192530:CDS |
GACATTCTTCGGTATTGCCG+TGG | 0.605280 | 8_1:-38387241 | Msa1192530:CDS |
AAATGGGATTGAGTATGTGA+TGG | 0.610661 | 8_1:-38388484 | Msa1192530:CDS |
ATAACTTTATCAACAAGACC+GGG | 0.615971 | 8_1:+38392959 | None:intergenic |
TACAGCAGAGGTCAAAGTTG+AGG | 0.616225 | 8_1:-38387908 | Msa1192530:CDS |
CGTCTTGAAGTAACTTATGT+CGG | 0.616986 | 8_1:-38386639 | Msa1192530:three_prime_UTR |
GTCAAGGCAGGTCAACTTAG+GGG | 0.618687 | 8_1:-38387863 | Msa1192530:CDS |
GCCGTGGTTTGAATCTTGTG+TGG | 0.619304 | 8_1:-38387225 | Msa1192530:CDS |
CAAGAATAAGAAGGACCAGA+GGG | 0.622260 | 8_1:+38387961 | None:intergenic |
AGAGGAAAATTCTTGAGAAG+TGG | 0.622368 | 8_1:-38386910 | Msa1192530:CDS |
TGTAACTATTGTGAAACTGG+TGG | 0.622892 | 8_1:-38387340 | Msa1192530:CDS |
TAAGAGCTCTGTGCGAAAGG+AGG | 0.623191 | 8_1:-38386667 | Msa1192530:CDS |
GAGAGACCTCCAACTTGATG+AGG | 0.623618 | 8_1:+38386740 | None:intergenic |
GGGAATACCTGATCGGAGAG+GGG | 0.627811 | 8_1:+38393829 | None:intergenic |
ACTCAACTCTGTGATAGACT+AGG | 0.628836 | 8_1:-38387313 | Msa1192530:CDS |
TTGACCTGCCTTGACTGTGA+AGG | 0.630560 | 8_1:+38387871 | None:intergenic |
TGAACCTGAATTTGTGAACA+CGG | 0.631197 | 8_1:-38387521 | Msa1192530:CDS |
CCAAGAATAAGAAGGACCAG+AGG | 0.631580 | 8_1:+38387960 | None:intergenic |
TTCCCCGGACAAAGAAATGG+TGG | 0.631839 | 8_1:-38387393 | Msa1192530:CDS |
ACTCTGTGATAGACTAGGAA+GGG | 0.632476 | 8_1:-38387308 | Msa1192530:CDS |
GGTACTTCAAATGGAAGAGG+AGG | 0.632591 | 8_1:-38393385 | Msa1192530:CDS |
CTATCGAGGATGCAATTCCC+CGG | 0.632973 | 8_1:-38387408 | Msa1192530:CDS |
TCGAGACTTCCGCAACGAAG+AGG | 0.634540 | 8_1:-38386928 | Msa1192530:CDS |
GTAACAAATCAACTCCCTCC+AGG | 0.635560 | 8_1:-38387648 | Msa1192530:CDS |
TGGACTGGTAAATATAAACT+CGG | 0.637782 | 8_1:-38387205 | Msa1192530:CDS |
TGGGGAATACCTGATCGGAG+AGG | 0.640323 | 8_1:+38393827 | None:intergenic |
TTTGTTACGTCTATACATTG+TGG | 0.645554 | 8_1:+38387663 | None:intergenic |
GTGAGTGGGGAATACCTGAT+CGG | 0.646590 | 8_1:+38393822 | None:intergenic |
TTCTTTCTTGAATCCCAAGG+CGG | 0.649660 | 8_1:+38387370 | None:intergenic |
TGCAACACTACTTAGAGACC+TGG | 0.657790 | 8_1:+38387630 | None:intergenic |
TCCACACAAGATTCAAACCA+CGG | 0.660642 | 8_1:+38387224 | None:intergenic |
AACACTACTTAGAGACCTGG+AGG | 0.669959 | 8_1:+38387633 | None:intergenic |
GGAAAAGTGAAAGTGAAACA+GGG | 0.678104 | 8_1:+38393891 | None:intergenic |
TAGGTGGCTTTGGAAGAATG+TGG | 0.684473 | 8_1:+38387434 | None:intergenic |
AAAGCCACCTATGACTATCG+AGG | 0.684655 | 8_1:-38387422 | Msa1192530:CDS |
CGATATGTATGGTACAGCAG+AGG | 0.685975 | 8_1:-38387920 | Msa1192530:CDS |
GATGATGAATTTCTCCGTGG+AGG | 0.689500 | 8_1:-38390987 | Msa1192530:CDS |
GCATCCTCGATAGTCATAGG+TGG | 0.694027 | 8_1:+38387418 | None:intergenic |
AAAACATCAAAAGAAGAACA+TGG | 0.696972 | 8_1:+38386593 | None:intergenic |
ACTGATGATGAATTTCTCCG+TGG | 0.719002 | 8_1:-38390990 | Msa1192530:CDS |
TCATCCGGAAGCAAAGTACG+AGG | 0.728222 | 8_1:-38393007 | Msa1192530:CDS |
ACACTACTTAGAGACCTGGA+GGG | 0.736672 | 8_1:+38387634 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTAATTTTTTAAAAAATT+AGG | + | chr8_1:38387132-38387151 | None:intergenic | 0.0% |
!! | TTAATATTATATTATCTAAC+AGG | + | chr8_1:38390355-38390374 | None:intergenic | 10.0% |
!!! | AATAAACTATATTTTAAGAT+TGG | - | chr8_1:38390588-38390607 | Msa1192530:intron | 10.0% |
!!! | TTTTTTTCAATTTAATTCTT+GGG | + | chr8_1:38390864-38390883 | None:intergenic | 10.0% |
!!! | ATTTTTTTCAATTTAATTCT+TGG | + | chr8_1:38390865-38390884 | None:intergenic | 10.0% |
!! | TTGTATAATTTATATGTTGA+TGG | - | chr8_1:38386904-38386923 | Msa1192530:CDS | 15.0% |
!! | TGTATAATTTATATGTTGAT+GGG | - | chr8_1:38386905-38386924 | Msa1192530:CDS | 15.0% |
!!! | TTTCCAAATACATTTTTTAT+TGG | - | chr8_1:38387075-38387094 | Msa1192530:CDS | 15.0% |
!! | AATCCAATAAAAAATGTATT+TGG | + | chr8_1:38387081-38387100 | None:intergenic | 15.0% |
!!! | AAATACATTTTTTATTGGAT+TGG | - | chr8_1:38387080-38387099 | Msa1192530:CDS | 15.0% |
!!! | AAATTAGGTTTTCAAAATTA+GGG | + | chr8_1:38387117-38387136 | None:intergenic | 15.0% |
!!! | AAAATTAGGTTTTCAAAATT+AGG | + | chr8_1:38387118-38387137 | None:intergenic | 15.0% |
!! | CTATATTATAACATATGATT+TGG | + | chr8_1:38387602-38387621 | None:intergenic | 15.0% |
!! | ATGAAAAAACAACAAAAATA+TGG | + | chr8_1:38388579-38388598 | None:intergenic | 15.0% |
!! | ATCATTATTCAAATTCAAAA+TGG | + | chr8_1:38388860-38388879 | None:intergenic | 15.0% |
!!! | ATAAATATTTTCTTTCAAAC+AGG | - | chr8_1:38389029-38389048 | Msa1192530:intron | 15.0% |
!!! | ATTCTAACTATGAATAATTT+TGG | - | chr8_1:38389907-38389926 | Msa1192530:intron | 15.0% |
!! | ATATCTAATATCTAAATCTT+AGG | + | chr8_1:38390447-38390466 | None:intergenic | 15.0% |
!! | TTGTAACAATAACATAAATA+TGG | + | chr8_1:38390803-38390822 | None:intergenic | 15.0% |
!! | AATTATCTTGTATAAATAAG+GGG | + | chr8_1:38391027-38391046 | None:intergenic | 15.0% |
!! | GAATTATCTTGTATAAATAA+GGG | + | chr8_1:38391028-38391047 | None:intergenic | 15.0% |
!! | AGAATTATCTTGTATAAATA+AGG | + | chr8_1:38391029-38391048 | None:intergenic | 15.0% |
!!! | TTGCTTTTTAAAATTTCAAT+AGG | + | chr8_1:38391200-38391219 | None:intergenic | 15.0% |
!! | GATAAATAGATATTATTCAA+CGG | - | chr8_1:38392222-38392241 | Msa1192530:intron | 15.0% |
!! | AATTATTACTAAAAAATGAC+TGG | + | chr8_1:38392320-38392339 | None:intergenic | 15.0% |
!! | ACTAATTGAAATTGACATAT+TGG | + | chr8_1:38386634-38386653 | None:intergenic | 20.0% |
!! | ATATTGAGAAAAAAATGGTT+GGG | + | chr8_1:38386690-38386709 | None:intergenic | 20.0% |
!! | CAAACATATTGAGAAAAAAA+TGG | + | chr8_1:38386695-38386714 | None:intergenic | 20.0% |
!!! | GGAGAATTATTTTTTTCAAA+TGG | + | chr8_1:38387257-38387276 | None:intergenic | 20.0% |
!! | TCTAAATAATCAAATTGCTT+TGG | + | chr8_1:38388093-38388112 | None:intergenic | 20.0% |
!!! | GTTTTTAAATTTGTTGTTAC+TGG | - | chr8_1:38388182-38388201 | Msa1192530:intron | 20.0% |
!!! | TATGTTTTGTGTATATCTAT+TGG | - | chr8_1:38389265-38389284 | Msa1192530:intron | 20.0% |
!!! | GAAATATTTATTGATTCAAG+TGG | - | chr8_1:38389569-38389588 | Msa1192530:intron | 20.0% |
!!! | ATGATAGTTAAATTTTAGTC+TGG | - | chr8_1:38389838-38389857 | Msa1192530:intron | 20.0% |
!! | CTGAAATTTAAATAACTTCT+TGG | - | chr8_1:38390028-38390047 | Msa1192530:intron | 20.0% |
!!! | TTTCATTTTTTTAGCAATCT+GGG | + | chr8_1:38390190-38390209 | None:intergenic | 20.0% |
!!! | TTTTCATTTTTTTAGCAATC+TGG | + | chr8_1:38390191-38390210 | None:intergenic | 20.0% |
!! | GATTGCTAAAAAAATGAAAA+AGG | - | chr8_1:38390191-38390210 | Msa1192530:CDS | 20.0% |
!! | TAACAATAACATAAATATGG+TGG | + | chr8_1:38390800-38390819 | None:intergenic | 20.0% |
!!! | TTTTATTGAAAGATTGAGAA+AGG | - | chr8_1:38390891-38390910 | Msa1192530:intron | 20.0% |
!! | ATTATCTTGTATAAATAAGG+GGG | + | chr8_1:38391026-38391045 | None:intergenic | 20.0% |
!!! | ACTTGTTAAAGGTTAAAAAA+TGG | + | chr8_1:38391253-38391272 | None:intergenic | 20.0% |
!! | GAGATTAAGTATGATTAAAA+AGG | + | chr8_1:38391372-38391391 | None:intergenic | 20.0% |
!! | AAAAATTAGATGCATAACAA+AGG | + | chr8_1:38391448-38391467 | None:intergenic | 20.0% |
!! | AATTCATCTCATAATTCTAA+AGG | + | chr8_1:38391666-38391685 | None:intergenic | 20.0% |
!!! | GCATTTTTCAAGTTTATATA+AGG | + | chr8_1:38391714-38391733 | None:intergenic | 20.0% |
!! | ATAAGTCTAAATAAAGGAAA+TGG | + | chr8_1:38391744-38391763 | None:intergenic | 20.0% |
!! | ACAACTATAAGTCTAAATAA+AGG | + | chr8_1:38391750-38391769 | None:intergenic | 20.0% |
!!! | TTTGTTAGCTTACTATTAAT+TGG | - | chr8_1:38391783-38391802 | Msa1192530:intron | 20.0% |
!! | TATATTATGGTAAAATCATC+CGG | + | chr8_1:38392047-38392066 | None:intergenic | 20.0% |
!!! | CAACGGTAAATTTTATATTA+TGG | + | chr8_1:38392060-38392079 | None:intergenic | 20.0% |
!! | CATAATATAAAATTTACCGT+TGG | - | chr8_1:38392058-38392077 | Msa1192530:intron | 20.0% |
!! | ACAATAAGTTTATAATCGAA+TGG | + | chr8_1:38392165-38392184 | None:intergenic | 20.0% |
!! | TTAGTAATAATTGACTATTG+AGG | - | chr8_1:38392328-38392347 | Msa1192530:intron | 20.0% |
!! | TTATCATCATATTCATACTT+TGG | + | chr8_1:38392611-38392630 | None:intergenic | 20.0% |
!!! | GAGAATCTAATCAATAATTT+TGG | - | chr8_1:38393535-38393554 | Msa1192530:intron | 20.0% |
!! | TAGATATTTAGATGATTTCA+GGG | - | chr8_1:38393913-38393932 | Msa1192530:five_prime_UTR | 20.0% |
! | CATATTGAGAAAAAAATGGT+TGG | + | chr8_1:38386691-38386710 | None:intergenic | 25.0% |
!!! | TGCATTGATTTAATGTATAC+AGG | - | chr8_1:38386932-38386951 | Msa1192530:CDS | 25.0% |
! | TTTAATGTATACAGGTGAAA+TGG | - | chr8_1:38386940-38386959 | Msa1192530:CDS | 25.0% |
! | AAGTTAATGAAAAGTGATCA+AGG | + | chr8_1:38387278-38387297 | None:intergenic | 25.0% |
! | TATAACTTTATCAACAAGAC+CGG | + | chr8_1:38387395-38387414 | None:intergenic | 25.0% |
! | GATAAAGTTATAGAAGAGAA+TGG | - | chr8_1:38387403-38387422 | Msa1192530:CDS | 25.0% |
!!! | GTGGTTTTGATTGATTTTAT+AGG | - | chr8_1:38387521-38387540 | Msa1192530:CDS | 25.0% |
!! | TTGTCAATGTTCTTTTGAAT+AGG | - | chr8_1:38387628-38387647 | Msa1192530:CDS | 25.0% |
!! | TGTCAATGTTCTTTTGAATA+GGG | - | chr8_1:38387629-38387648 | Msa1192530:CDS | 25.0% |
! | TTTATGATCTCTTGAAATAC+TGG | - | chr8_1:38387685-38387704 | Msa1192530:CDS | 25.0% |
! | TGGAAACTTGTAATAACATT+TGG | - | chr8_1:38387705-38387724 | Msa1192530:CDS | 25.0% |
! | CATTAAATCTTTAATCCAGA+CGG | + | chr8_1:38387939-38387958 | None:intergenic | 25.0% |
!!! | AATCAAATTGCTTTGGAATT+AGG | + | chr8_1:38388086-38388105 | None:intergenic | 25.0% |
! | TATCAAATAGAGATATGACT+TGG | - | chr8_1:38388380-38388399 | Msa1192530:intron | 25.0% |
! | ATCAAATAGAGATATGACTT+GGG | - | chr8_1:38388381-38388400 | Msa1192530:intron | 25.0% |
!!! | CAATTCTTAGAATTTTGACT+TGG | + | chr8_1:38388471-38388490 | None:intergenic | 25.0% |
! | AGATAAATGTATACTTTCCA+AGG | - | chr8_1:38388496-38388515 | Msa1192530:CDS | 25.0% |
!! | AAAACATTTATCCTAGTCTT+GGG | + | chr8_1:38388543-38388562 | None:intergenic | 25.0% |
!!! | ATTTAAGAAAGTACCTCTTT+TGG | + | chr8_1:38388797-38388816 | None:intergenic | 25.0% |
!! | ATATTTTCTTTCAAACAGGA+AGG | - | chr8_1:38389033-38389052 | Msa1192530:intron | 25.0% |
! | ACAAAACATAAGCAATGTTA+AGG | + | chr8_1:38389255-38389274 | None:intergenic | 25.0% |
! | ATATTCACATACCAAGTTTA+CGG | + | chr8_1:38389405-38389424 | None:intergenic | 25.0% |
! | ATATACTTGCCAATTCATTA+TGG | - | chr8_1:38389460-38389479 | Msa1192530:intron | 25.0% |
! | TATACTTGCCAATTCATTAT+GGG | - | chr8_1:38389461-38389480 | Msa1192530:intron | 25.0% |
! | TGTGATTAACATTGTTCATT+TGG | - | chr8_1:38389861-38389880 | Msa1192530:intron | 25.0% |
! | TGGAAGATCATATACATTTA+TGG | - | chr8_1:38390066-38390085 | Msa1192530:intron | 25.0% |
! | TGCTAAAAAAATGAAAAAGG+AGG | - | chr8_1:38390194-38390213 | Msa1192530:CDS | 25.0% |
!! | TACTATTTGTTAACTTTCTG+AGG | - | chr8_1:38390391-38390410 | Msa1192530:intron | 25.0% |
!! | ACTATTTGTTAACTTTCTGA+GGG | - | chr8_1:38390392-38390411 | Msa1192530:intron | 25.0% |
!!! | TCTATCTATTTTTGTTTGCT+AGG | - | chr8_1:38390513-38390532 | Msa1192530:intron | 25.0% |
!!! | TATTTTTGTTTGCTAGGATA+TGG | - | chr8_1:38390519-38390538 | Msa1192530:intron | 25.0% |
!!! | ACAAATTTGTTTTTCACCAT+TGG | - | chr8_1:38390652-38390671 | Msa1192530:intron | 25.0% |
! | TTGAGAAAGGATAAAGATAA+TGG | - | chr8_1:38390904-38390923 | Msa1192530:intron | 25.0% |
! | TGAGAAAGGATAAAGATAAT+GGG | - | chr8_1:38390905-38390924 | Msa1192530:intron | 25.0% |
! | TCAAAGTAGAAACTTTATCT+TGG | - | chr8_1:38391159-38391178 | Msa1192530:intron | 25.0% |
! | ACAAAGCCCAATTAATTTAA+GGG | + | chr8_1:38391307-38391326 | None:intergenic | 25.0% |
! | AACAAAGCCCAATTAATTTA+AGG | + | chr8_1:38391308-38391327 | None:intergenic | 25.0% |
! | TTGTTGGTATACTATCTATT+TGG | - | chr8_1:38391417-38391436 | Msa1192530:intron | 25.0% |
!!! | TAAAGGTATGTACTTTTCAA+AGG | + | chr8_1:38391649-38391668 | None:intergenic | 25.0% |
! | GAATTATGAGATGAATTTGT+TGG | - | chr8_1:38391669-38391688 | Msa1192530:intron | 25.0% |
! | TTTATATAAGGCAATGATAC+AGG | + | chr8_1:38391702-38391721 | None:intergenic | 25.0% |
!! | TTATAGTTGTTATTACTCTC+TGG | - | chr8_1:38391760-38391779 | Msa1192530:intron | 25.0% |
!!! | TTCATTTTTGCAGAACAAAA+TGG | - | chr8_1:38391849-38391868 | Msa1192530:intron | 25.0% |
!!! | TCATTTTTGCAGAACAAAAT+GGG | - | chr8_1:38391850-38391869 | Msa1192530:intron | 25.0% |
!! | ACCATTCTATAACTTTTTAC+CGG | - | chr8_1:38392025-38392044 | Msa1192530:intron | 25.0% |
! | ATATTATTCAACGGTCAATT+CGG | - | chr8_1:38392231-38392250 | Msa1192530:intron | 25.0% |
! | TTCGGCAAAAATAAAAAAGT+TGG | - | chr8_1:38392249-38392268 | Msa1192530:intron | 25.0% |
! | ATAGTGTCCAAATATTACAT+TGG | - | chr8_1:38392286-38392305 | Msa1192530:intron | 25.0% |
! | TGGAAAATGATAGAAATAAG+AGG | - | chr8_1:38392585-38392604 | Msa1192530:CDS | 25.0% |
! | ACATTTCCAAACAAGAAAAA+TGG | + | chr8_1:38392755-38392774 | None:intergenic | 25.0% |
!!! | TTGTCAATTTTTAGTGGAAT+TGG | - | chr8_1:38393343-38393362 | Msa1192530:CDS | 25.0% |
!!! | CTTTTATTTTAATACCAAGG+CGG | + | chr8_1:38393390-38393409 | None:intergenic | 25.0% |
!!! | GAGCTTTTATTTTAATACCA+AGG | + | chr8_1:38393393-38393412 | None:intergenic | 25.0% |
! | AAAACATCAAAAGAAGAACA+TGG | + | chr8_1:38393760-38393779 | None:intergenic | 25.0% |
! | GTAGATATTTAGATGATTTC+AGG | - | chr8_1:38393912-38393931 | Msa1192530:five_prime_UTR | 25.0% |
!! | ATATTGGTCTTTAACCAAAG+AGG | + | chr8_1:38386618-38386637 | None:intergenic | 30.0% |
! | TAATCAAAGTCCTCAGTTTT+AGG | + | chr8_1:38387007-38387026 | None:intergenic | 30.0% |
AAAGTACGAGGATTCTTTAT+TGG | - | chr8_1:38387355-38387374 | Msa1192530:CDS | 30.0% | |
ATAACTTTATCAACAAGACC+GGG | + | chr8_1:38387394-38387413 | None:intergenic | 30.0% | |
! | GTCAATGTTCTTTTGAATAG+GGG | - | chr8_1:38387630-38387649 | Msa1192530:CDS | 30.0% |
TTGTTAATGCTACAGACAAA+TGG | - | chr8_1:38387750-38387769 | Msa1192530:CDS | 30.0% | |
CCAAAAAGGCTACAAAAATT+GGG | + | chr8_1:38387888-38387907 | None:intergenic | 30.0% | |
! | CCAATTTTTGTAGCCTTTTT+GGG | - | chr8_1:38387886-38387905 | Msa1192530:CDS | 30.0% |
TGACATAACTCATACAGAAT+GGG | + | chr8_1:38388037-38388056 | None:intergenic | 30.0% | |
TAGGAGCAAAACAATACAAA+AGG | + | chr8_1:38388067-38388086 | None:intergenic | 30.0% | |
ATTTAAAAACCGCTTCTTCA+TGG | + | chr8_1:38388172-38388191 | None:intergenic | 30.0% | |
! | ATTTGAAGTGTGGACTAATA+GGG | + | chr8_1:38388328-38388347 | None:intergenic | 30.0% |
ATAACTCAACCCAACAAAAT+CGG | + | chr8_1:38388445-38388464 | None:intergenic | 30.0% | |
CAAAACATTTATCCTAGTCT+TGG | + | chr8_1:38388544-38388563 | None:intergenic | 30.0% | |
! | TTTCAAAATCTGTCACTTCA+AGG | - | chr8_1:38388612-38388631 | Msa1192530:intron | 30.0% |
CAAGGACTATACTATGTAAA+TGG | - | chr8_1:38388630-38388649 | Msa1192530:intron | 30.0% | |
AATTGCAAAGCAAGATCAAA+AGG | + | chr8_1:38388678-38388697 | None:intergenic | 30.0% | |
ATCTTGCTTTGCAATTATGT+AGG | - | chr8_1:38388682-38388701 | Msa1192530:intron | 30.0% | |
! | CGAAAGCTTATTTGATGATA+AGG | - | chr8_1:38388742-38388761 | Msa1192530:intron | 30.0% |
ATAATCAAACCATTCTTACC+AGG | + | chr8_1:38388836-38388855 | None:intergenic | 30.0% | |
CTATTGAATGCTATAAGTCT+TGG | - | chr8_1:38388890-38388909 | Msa1192530:intron | 30.0% | |
TCTAATAATTTACTACTCGC+TGG | - | chr8_1:38388914-38388933 | Msa1192530:intron | 30.0% | |
ATTTATCTGCAACTGTATGT+TGG | - | chr8_1:38388957-38388976 | Msa1192530:intron | 30.0% | |
AACAGTCAAATTACTTGTCT+AGG | - | chr8_1:38389129-38389148 | Msa1192530:intron | 30.0% | |
ACAGTCAAATTACTTGTCTA+GGG | - | chr8_1:38389130-38389149 | Msa1192530:intron | 30.0% | |
!!! | TTATTTCCCCTTGTTTTCAT+TGG | - | chr8_1:38389173-38389192 | Msa1192530:intron | 30.0% |
ACTGTTTACAAAATTCTCTC+AGG | - | chr8_1:38389291-38389310 | Msa1192530:intron | 30.0% | |
ATACTTGCCAATTCATTATG+GGG | - | chr8_1:38389462-38389481 | Msa1192530:intron | 30.0% | |
AAATACACCCCATAATGAAT+TGG | + | chr8_1:38389472-38389491 | None:intergenic | 30.0% | |
! | CCAATACAACATATGTTTTC+AGG | + | chr8_1:38389528-38389547 | None:intergenic | 30.0% |
CCTGAAAACATATGTTGTAT+TGG | - | chr8_1:38389525-38389544 | Msa1192530:intron | 30.0% | |
ATCAATAAATATTTCCCCCT+TGG | + | chr8_1:38389564-38389583 | None:intergenic | 30.0% | |
CTTGGCATACTTTATACATA+TGG | - | chr8_1:38390046-38390065 | Msa1192530:intron | 30.0% | |
! | ATTGATTCATTGCTCATTTC+AGG | - | chr8_1:38390120-38390139 | Msa1192530:CDS | 30.0% |
CAAATGTTATGTTCGAGAAA+AGG | - | chr8_1:38390236-38390255 | Msa1192530:intron | 30.0% | |
TATCTAACAGGTAAAGTTGA+GGG | + | chr8_1:38390343-38390362 | None:intergenic | 30.0% | |
TTATCTAACAGGTAAAGTTG+AGG | + | chr8_1:38390344-38390363 | None:intergenic | 30.0% | |
AGTTAACAAATAGTAGCACA+TGG | + | chr8_1:38390386-38390405 | None:intergenic | 30.0% | |
CCAACAAACTAAAGTAATTG+TGG | + | chr8_1:38390563-38390582 | None:intergenic | 30.0% | |
!! | CCACAATTACTTTAGTTTGT+TGG | - | chr8_1:38390560-38390579 | Msa1192530:intron | 30.0% |
TTAATGTACTTGTGCACATT+AGG | + | chr8_1:38390619-38390638 | None:intergenic | 30.0% | |
GTGAAAAACAAATTTGTGCA+CGG | + | chr8_1:38390649-38390668 | None:intergenic | 30.0% | |
!!! | GATGAGATTTTTTGATCCAA+TGG | + | chr8_1:38390671-38390690 | None:intergenic | 30.0% |
TGAGACTTATGATTCAAAGA+TGG | - | chr8_1:38390712-38390731 | Msa1192530:intron | 30.0% | |
AATATGGTGGCTAATCTTAA+GGG | + | chr8_1:38390787-38390806 | None:intergenic | 30.0% | |
AAATATGGTGGCTAATCTTA+AGG | + | chr8_1:38390788-38390807 | None:intergenic | 30.0% | |
! | TTACAATTTGTTTCCTCCAA+GGG | - | chr8_1:38390817-38390836 | Msa1192530:intron | 30.0% |
! | TCTATATCCTAGCAGATTTT+TGG | - | chr8_1:38391046-38391065 | Msa1192530:intron | 30.0% |
AAATACACCAAAAATCTGCT+AGG | + | chr8_1:38391056-38391075 | None:intergenic | 30.0% | |
TTGGTGTATTTGAATCAATC+AGG | - | chr8_1:38391065-38391084 | Msa1192530:intron | 30.0% | |
AGCATGACCCTTAAATTAAT+TGG | - | chr8_1:38391297-38391316 | Msa1192530:intron | 30.0% | |
GCATGACCCTTAAATTAATT+GGG | - | chr8_1:38391298-38391317 | Msa1192530:intron | 30.0% | |
AACTGTGAAACTGTAACATT+AGG | - | chr8_1:38391611-38391630 | Msa1192530:CDS | 30.0% | |
! | TGAGTATGTGATGGAATATA+AGG | - | chr8_1:38391875-38391894 | Msa1192530:intron | 30.0% |
! | ATGTGATGGAATATAAGGTT+AGG | - | chr8_1:38391880-38391899 | Msa1192530:intron | 30.0% |
TCCGGTAAAAAGTTATAGAA+TGG | + | chr8_1:38392029-38392048 | None:intergenic | 30.0% | |
GATAGTAAGTTTCAATCCAA+CGG | + | chr8_1:38392077-38392096 | None:intergenic | 30.0% | |
CATGGTACCAATGTAATATT+TGG | + | chr8_1:38392296-38392315 | None:intergenic | 30.0% | |
TACTAAAAAATGACTGGACA+TGG | + | chr8_1:38392314-38392333 | None:intergenic | 30.0% | |
TCTTTGATCCAAGAATAAGA+AGG | + | chr8_1:38392401-38392420 | None:intergenic | 30.0% | |
TTTGTTACGTCTATACATTG+TGG | + | chr8_1:38392690-38392709 | None:intergenic | 30.0% | |
!! | AAACCTCCATTTTTCTTGTT+TGG | - | chr8_1:38392746-38392765 | Msa1192530:intron | 30.0% |
TTTCCAAACAAGAAAAATGG+AGG | + | chr8_1:38392752-38392771 | None:intergenic | 30.0% | |
CAAACATAACATATGACTCT+TGG | - | chr8_1:38392777-38392796 | Msa1192530:intron | 30.0% | |
ATAACCTTCTATTCTGTTCA+AGG | + | chr8_1:38392867-38392886 | None:intergenic | 30.0% | |
AACTGTAACTATTGTGAAAC+TGG | - | chr8_1:38393007-38393026 | Msa1192530:CDS | 30.0% | |
!! | TGGACTGGTAAATATAAACT+CGG | - | chr8_1:38393145-38393164 | Msa1192530:intron | 30.0% |
!! | ACTCTGTTGTCAATTTTTAG+TGG | - | chr8_1:38393337-38393356 | Msa1192530:CDS | 30.0% |
!!! | TCAATTTTTAGTGGAATTGG+TGG | - | chr8_1:38393346-38393365 | Msa1192530:CDS | 30.0% |
TAAAATAAAAGCTCTCGTCT+CGG | - | chr8_1:38393399-38393418 | Msa1192530:exon | 30.0% | |
! | AATCTGTTCGTATTTTGCAA+CGG | - | chr8_1:38393659-38393678 | Msa1192530:intron | 30.0% |
GTTTCTCTAATGTTAACTGT+TGG | - | chr8_1:38393890-38393909 | Msa1192530:five_prime_UTR | 30.0% | |
GGAAAAGTGAAAGTGAAACA+GGG | + | chr8_1:38386462-38386481 | None:intergenic | 35.0% | |
AGGAAAAGTGAAAGTGAAAC+AGG | + | chr8_1:38386463-38386482 | None:intergenic | 35.0% | |
AGAAAAAGTGAGTGTGAGAA+GGG | + | chr8_1:38386566-38386585 | None:intergenic | 35.0% | |
AAGAAAAAGTGAGTGTGAGA+AGG | + | chr8_1:38386567-38386586 | None:intergenic | 35.0% | |
GTCTTTAACCAAAGAGGTTT+AGG | + | chr8_1:38386612-38386631 | None:intergenic | 35.0% | |
AGAGAGAGAGATTGAGAAAA+TGG | - | chr8_1:38386807-38386826 | Msa1192530:CDS | 35.0% | |
! | AGGGTTTAACATGTGTTGAT+GGG | - | chr8_1:38386846-38386865 | Msa1192530:CDS | 35.0% |
!! | TCCTGTTTTTCCTAAAACTG+AGG | - | chr8_1:38386994-38387013 | Msa1192530:CDS | 35.0% |
!!! | TCCTCAGTTTTAGGAAAAAC+AGG | + | chr8_1:38386998-38387017 | None:intergenic | 35.0% |
ACCTTATACTGCTCTTTCAA+GGG | - | chr8_1:38387036-38387055 | Msa1192530:CDS | 35.0% | |
ATGTGAGAAGTTCATGAAAC+TGG | + | chr8_1:38387192-38387211 | None:intergenic | 35.0% | |
TCTCTTCTTTCATAATCACC+AGG | - | chr8_1:38387306-38387325 | Msa1192530:CDS | 35.0% | |
ACGAGGATTCTTTATTGGAA+TGG | - | chr8_1:38387360-38387379 | Msa1192530:CDS | 35.0% | |
CGAGGATTCTTTATTGGAAT+GGG | - | chr8_1:38387361-38387380 | Msa1192530:CDS | 35.0% | |
ATACTTCACTTTGCCAATTG+TGG | - | chr8_1:38387494-38387513 | Msa1192530:CDS | 35.0% | |
CAAAACCACATTACCACAAT+TGG | + | chr8_1:38387510-38387529 | None:intergenic | 35.0% | |
AGAGATTCTCTTGAGATGTT+CGG | - | chr8_1:38387568-38387587 | Msa1192530:CDS | 35.0% | |
!! | GAGCATTGGGAAAGAAATTT+GGG | + | chr8_1:38387830-38387849 | None:intergenic | 35.0% |
!! | TGAGCATTGGGAAAGAAATT+TGG | + | chr8_1:38387831-38387850 | None:intergenic | 35.0% |
! | ACCTCTTTTGAATGAGCATT+GGG | + | chr8_1:38387843-38387862 | None:intergenic | 35.0% |
! | TACCTCTTTTGAATGAGCAT+TGG | + | chr8_1:38387844-38387863 | None:intergenic | 35.0% |
! | CCCAATTTTTGTAGCCTTTT+TGG | - | chr8_1:38387885-38387904 | Msa1192530:CDS | 35.0% |
CCCAAAAAGGCTACAAAAAT+TGG | + | chr8_1:38387889-38387908 | None:intergenic | 35.0% | |
GCAATAATTTCTGCCCAAAA+AGG | + | chr8_1:38387902-38387921 | None:intergenic | 35.0% | |
GTGACATAACTCATACAGAA+TGG | + | chr8_1:38388038-38388057 | None:intergenic | 35.0% | |
ACTTGTGCAAACACATATTG+TGG | - | chr8_1:38388136-38388155 | Msa1192530:intron | 35.0% | |
CTTGTGCAAACACATATTGT+GGG | - | chr8_1:38388137-38388156 | Msa1192530:intron | 35.0% | |
! | CATTTGAAGTGTGGACTAAT+AGG | + | chr8_1:38388329-38388348 | None:intergenic | 35.0% |
!! | TCCTTATAAGCCGATTTTGT+TGG | - | chr8_1:38388432-38388451 | Msa1192530:intron | 35.0% |
!! | CCTTATAAGCCGATTTTGTT+GGG | - | chr8_1:38388433-38388452 | Msa1192530:intron | 35.0% |
TGATTGATCATGGAAACTTC+TGG | + | chr8_1:38388773-38388792 | None:intergenic | 35.0% | |
!! | CTCTTTTGGTTGATTGATCA+TGG | + | chr8_1:38388783-38388802 | None:intergenic | 35.0% |
CATGATCAATCAACCAAAAG+AGG | - | chr8_1:38388781-38388800 | Msa1192530:intron | 35.0% | |
ATACAGTTGCAGATAAATGC+AGG | + | chr8_1:38388955-38388974 | None:intergenic | 35.0% | |
! | AGGCTAAAAGACACACTTTT+TGG | - | chr8_1:38389053-38389072 | Msa1192530:intron | 35.0% |
TCAATGCCAATGAAAACAAG+GGG | + | chr8_1:38389182-38389201 | None:intergenic | 35.0% | |
CTCAATGCCAATGAAAACAA+GGG | + | chr8_1:38389183-38389202 | None:intergenic | 35.0% | |
TCTCAATGCCAATGAAAACA+AGG | + | chr8_1:38389184-38389203 | None:intergenic | 35.0% | |
CATAAGCAATGTTAAGGAGA+CGG | + | chr8_1:38389249-38389268 | None:intergenic | 35.0% | |
GTTTACAAAATTCTCTCAGG+AGG | - | chr8_1:38389294-38389313 | Msa1192530:intron | 35.0% | |
GGAGAAATTCATCATCAGTA+AGG | + | chr8_1:38389359-38389378 | None:intergenic | 35.0% | |
GAATTTGCAATCCGTAAACT+TGG | - | chr8_1:38389391-38389410 | Msa1192530:intron | 35.0% | |
! | ATCATAAAAAGCAGAAGTGC+AGG | + | chr8_1:38389436-38389455 | None:intergenic | 35.0% |
!! | TTGGTCTTTTTGTCTAACCA+AGG | - | chr8_1:38389544-38389563 | Msa1192530:intron | 35.0% |
! | TGGTCTTTTTGTCTAACCAA+GGG | - | chr8_1:38389545-38389564 | Msa1192530:intron | 35.0% |
! | ATTGATTCAAGTGGCACTAA+TGG | - | chr8_1:38389578-38389597 | Msa1192530:intron | 35.0% |
! | CATTTTACAAACTATGCCTG+AGG | - | chr8_1:38389602-38389621 | Msa1192530:intron | 35.0% |
AAATTCCTACATCACACTTG+AGG | + | chr8_1:38389685-38389704 | None:intergenic | 35.0% | |
! | AATCGAAGTGTCTTTGAACA+TGG | - | chr8_1:38389791-38389810 | Msa1192530:intron | 35.0% |
! | ATCGAAGTGTCTTTGAACAT+GGG | - | chr8_1:38389792-38389811 | Msa1192530:intron | 35.0% |
ATGTTATGTTCGAGAAAAGG+AGG | - | chr8_1:38390239-38390258 | Msa1192530:intron | 35.0% | |
ATCTTAGGAAAAGCAAGTAG+AGG | + | chr8_1:38390432-38390451 | None:intergenic | 35.0% | |
TCACTTGTGCATCATAGAAT+TGG | - | chr8_1:38390761-38390780 | Msa1192530:intron | 35.0% | |
! | GTTACAATTTGTTTCCTCCA+AGG | - | chr8_1:38390816-38390835 | Msa1192530:intron | 35.0% |
AGTAGTGACTCTATTGTGAA+CGG | + | chr8_1:38390957-38390976 | None:intergenic | 35.0% | |
AAATGCTAACAAATGCCCTT+AGG | - | chr8_1:38391120-38391139 | Msa1192530:intron | 35.0% | |
AATGCTAACAAATGCCCTTA+GGG | - | chr8_1:38391121-38391140 | Msa1192530:intron | 35.0% | |
CTTCTTAACAAATGCCCTAA+GGG | + | chr8_1:38391138-38391157 | None:intergenic | 35.0% | |
! | TGCATCTAATTTTTCTACCC+TGG | - | chr8_1:38391454-38391473 | Msa1192530:intron | 35.0% |
! | GCATCTAATTTTTCTACCCT+GGG | - | chr8_1:38391455-38391474 | Msa1192530:intron | 35.0% |
ATTAGCAATGAGCAACTCTT+TGG | - | chr8_1:38391485-38391504 | Msa1192530:intron | 35.0% | |
!! | TGAGCAACTCTTTGGAATTA+TGG | - | chr8_1:38391493-38391512 | Msa1192530:intron | 35.0% |
AACGCTTCAGTTGTTTGAAA+TGG | - | chr8_1:38391520-38391539 | Msa1192530:intron | 35.0% | |
! | ACGCTTCAGTTGTTTGAAAT+GGG | - | chr8_1:38391521-38391540 | Msa1192530:intron | 35.0% |
!! | TCCTCAGCAGTTGATAAATT+AGG | - | chr8_1:38391563-38391582 | Msa1192530:intron | 35.0% |
ACCTAATTTATCAACTGCTG+AGG | + | chr8_1:38391567-38391586 | None:intergenic | 35.0% | |
!! | CTATTAATTGGCTGTTTTGC+AGG | - | chr8_1:38391795-38391814 | Msa1192530:intron | 35.0% |
!! | AAGTTTGCAAGCTCTGAAAT+TGG | + | chr8_1:38391831-38391850 | None:intergenic | 35.0% |
AAATGGGATTGAGTATGTGA+TGG | - | chr8_1:38391866-38391885 | Msa1192530:intron | 35.0% | |
TAGATACAAACACACATGCA+TGG | + | chr8_1:38391936-38391955 | None:intergenic | 35.0% | |
GAAGAACAAAGCGATATGTA+TGG | - | chr8_1:38392419-38392438 | Msa1192530:intron | 35.0% | |
! | CTATCATTTTCCATAAAGCC+TGG | + | chr8_1:38392578-38392597 | None:intergenic | 35.0% |
!! | ACTCTAGTCTTGATCCTTAT+TGG | - | chr8_1:38392636-38392655 | Msa1192530:intron | 35.0% |
!! | CTCTAGTCTTGATCCTTATT+GGG | - | chr8_1:38392637-38392656 | Msa1192530:intron | 35.0% |
TGAACCTGAATTTGTGAACA+CGG | - | chr8_1:38392829-38392848 | Msa1192530:intron | 35.0% | |
!! | TGTGAACACGGAGTTATTTT+CGG | - | chr8_1:38392841-38392860 | Msa1192530:intron | 35.0% |
AACTTCTTTCTTGAATCCCA+AGG | + | chr8_1:38392986-38393005 | None:intergenic | 35.0% | |
TGTAACTATTGTGAAACTGG+TGG | - | chr8_1:38393010-38393029 | Msa1192530:CDS | 35.0% | |
AACAGCAGAAAGACATTCTT+CGG | - | chr8_1:38393098-38393117 | Msa1192530:intron | 35.0% | |
TAAGATAAGCTCCAAGTGTT+CGG | + | chr8_1:38393182-38393201 | None:intergenic | 35.0% | |
GATATCCTAATGTATCTGTC+TGG | + | chr8_1:38393279-38393298 | None:intergenic | 35.0% | |
! | AAGAATTTTCCTCTTCGTTG+CGG | + | chr8_1:38393434-38393453 | None:intergenic | 35.0% |
AGAGGAAAATTCTTGAGAAG+TGG | - | chr8_1:38393440-38393459 | Msa1192530:intron | 35.0% | |
!!! | TAATTTTGGTGTTTTCGACC+TGG | - | chr8_1:38393549-38393568 | Msa1192530:intron | 35.0% |
ATGGATTCTGATAAATGACC+AGG | + | chr8_1:38393570-38393589 | None:intergenic | 35.0% | |
! | ATCTGTTCGTATTTTGCAAC+GGG | - | chr8_1:38393660-38393679 | Msa1192530:intron | 35.0% |
CGTCTTGAAGTAACTTATGT+CGG | - | chr8_1:38393711-38393730 | Msa1192530:intron | 35.0% | |
!!! | TATGTGACTTTTTCAGTGCA+AGG | - | chr8_1:38393808-38393827 | Msa1192530:intron | 35.0% |
CATTAGAGAAACACAGAGAT+GGG | + | chr8_1:38393882-38393901 | None:intergenic | 35.0% | |
ACATTAGAGAAACACAGAGA+TGG | + | chr8_1:38393883-38393902 | None:intergenic | 35.0% | |
AGTGAAAGTGAAACAGGGTT+CGG | + | chr8_1:38386457-38386476 | None:intergenic | 40.0% | |
!! | CACTTTCACTTTTCCTCTTC+TGG | - | chr8_1:38386467-38386486 | Msa1192530:three_prime_UTR | 40.0% |
TGCATGAACCTAAACCTCTT+TGG | - | chr8_1:38386601-38386620 | Msa1192530:three_prime_UTR | 40.0% | |
GAGAGATTGAGAAAATGGCT+AGG | - | chr8_1:38386812-38386831 | Msa1192530:CDS | 40.0% | |
AAAATGGCTAGGTCATGTTG+TGG | - | chr8_1:38386823-38386842 | Msa1192530:CDS | 40.0% | |
GAGGGTTTAACATGTGTTGA+TGG | - | chr8_1:38386845-38386864 | Msa1192530:CDS | 40.0% | |
! | GTTGATGGGATTCTCTTTCT+AGG | - | chr8_1:38386860-38386879 | Msa1192530:CDS | 40.0% |
ATGTATACAGGTGAAATGGC+AGG | - | chr8_1:38386944-38386963 | Msa1192530:CDS | 40.0% | |
GAAATGGCAGGTACTTCAAA+TGG | - | chr8_1:38386956-38386975 | Msa1192530:CDS | 40.0% | |
CACCTTATACTGCTCTTTCA+AGG | - | chr8_1:38387035-38387054 | Msa1192530:CDS | 40.0% | |
TCCCTTGAAAGAGCAGTATA+AGG | + | chr8_1:38387040-38387059 | None:intergenic | 40.0% | |
! | TGCTCTTTCAAGGGATTTTC+TGG | - | chr8_1:38387045-38387064 | Msa1192530:CDS | 40.0% |
GAGAAGTTCATGAAACTGGT+GGG | + | chr8_1:38387188-38387207 | None:intergenic | 40.0% | |
TGAGAAGTTCATGAAACTGG+TGG | + | chr8_1:38387189-38387208 | None:intergenic | 40.0% | |
!! | TTAGTCTTATGCCAAGTGCA+TGG | - | chr8_1:38387450-38387469 | Msa1192530:CDS | 40.0% |
TATCAATTGTGCCATGCACT+TGG | + | chr8_1:38387464-38387483 | None:intergenic | 40.0% | |
AAGTGCATGGCACAATTGAT+AGG | - | chr8_1:38387463-38387482 | Msa1192530:CDS | 40.0% | |
! | CTTTGCCAATTGTGGTAATG+TGG | - | chr8_1:38387502-38387521 | Msa1192530:CDS | 40.0% |
TCCCAATGCTCATTCAAAAG+AGG | - | chr8_1:38387839-38387858 | Msa1192530:CDS | 40.0% | |
AGGCTACAAAAATTGGGTGT+GGG | + | chr8_1:38387882-38387901 | None:intergenic | 40.0% | |
AAGGCTACAAAAATTGGGTG+TGG | + | chr8_1:38387883-38387902 | None:intergenic | 40.0% | |
AACTCATACAGAATGGGAGA+GGG | + | chr8_1:38388031-38388050 | None:intergenic | 40.0% | |
TAACTCATACAGAATGGGAG+AGG | + | chr8_1:38388032-38388051 | None:intergenic | 40.0% | |
AATTCCTAGCCATGAAGAAG+CGG | - | chr8_1:38388160-38388179 | Msa1192530:intron | 40.0% | |
TAGTCCACACTTCAAATGTC+CGG | - | chr8_1:38388331-38388350 | Msa1192530:intron | 40.0% | |
! | CAAAATCGGCTTATAAGGAG+AGG | + | chr8_1:38388431-38388450 | None:intergenic | 40.0% |
! | CCCAACAAAATCGGCTTATA+AGG | + | chr8_1:38388436-38388455 | None:intergenic | 40.0% |
ATTCATTTAGTGCATCGTCC+TGG | - | chr8_1:38388815-38388834 | Msa1192530:CDS | 40.0% | |
! | ACTGATGATGAATTTCTCCG+TGG | - | chr8_1:38389360-38389379 | Msa1192530:intron | 40.0% |
TGCAAATTCAACTTCCTCCA+CGG | + | chr8_1:38389380-38389399 | None:intergenic | 40.0% | |
! | GGTCTTTTTGTCTAACCAAG+GGG | - | chr8_1:38389546-38389565 | Msa1192530:intron | 40.0% |
! | GTCTTTTTGTCTAACCAAGG+GGG | - | chr8_1:38389547-38389566 | Msa1192530:intron | 40.0% |
ATGTGTTTGCTTTGCATGCT+TGG | - | chr8_1:38389712-38389731 | Msa1192530:intron | 40.0% | |
!! | TTGGACTTGCTACTAATAGC+AGG | - | chr8_1:38389731-38389750 | Msa1192530:intron | 40.0% |
! | TCGAAGTGTCTTTGAACATG+GGG | - | chr8_1:38389793-38389812 | Msa1192530:intron | 40.0% |
! | TTGGTGGTAGTTGTTATCGA+TGG | - | chr8_1:38389985-38390004 | Msa1192530:intron | 40.0% |
AACAAAACCTCTTCAACCCT+TGG | + | chr8_1:38390836-38390855 | None:intergenic | 40.0% | |
!!! | AGGGTTGAAGAGGTTTTGTT+AGG | - | chr8_1:38390836-38390855 | Msa1192530:intron | 40.0% |
GAGATGAATATCTCCTCCAT+GGG | - | chr8_1:38390927-38390946 | Msa1192530:intron | 40.0% | |
GTAGTGACTCTATTGTGAAC+GGG | + | chr8_1:38390956-38390975 | None:intergenic | 40.0% | |
AATAAGGGGGTTGTGTTTGA+GGG | + | chr8_1:38391013-38391032 | None:intergenic | 40.0% | |
AAATAAGGGGGTTGTGTTTG+AGG | + | chr8_1:38391014-38391033 | None:intergenic | 40.0% | |
GCTTCTTAACAAATGCCCTA+AGG | + | chr8_1:38391139-38391158 | None:intergenic | 40.0% | |
TCATGCTAAAAGAGCCCTTA+GGG | + | chr8_1:38391284-38391303 | None:intergenic | 40.0% | |
ATTGCTAATCTGTGATCCCA+GGG | + | chr8_1:38391474-38391493 | None:intergenic | 40.0% | |
!! | AGCTCTGAAATTGGAACATC+TGG | + | chr8_1:38391822-38391841 | None:intergenic | 40.0% |
AAATCAAATCACACCGTCAC+AGG | - | chr8_1:38391980-38391999 | Msa1192530:intron | 40.0% | |
CAAGAATAAGAAGGACCAGA+GGG | + | chr8_1:38392392-38392411 | None:intergenic | 40.0% | |
!!! | AAAGCCTGGTTTTACGTCAT+CGG | + | chr8_1:38392564-38392583 | None:intergenic | 40.0% |
TGACGTAAAACCAGGCTTTA+TGG | - | chr8_1:38392565-38392584 | Msa1192530:CDS | 40.0% | |
! | TAGTCTTGATCCTTATTGGG+TGG | - | chr8_1:38392640-38392659 | Msa1192530:intron | 40.0% |
TCCTTATTGGGTGGAAGAAA+TGG | - | chr8_1:38392649-38392668 | Msa1192530:intron | 40.0% | |
ACCATTTCTTCCACCCAATA+AGG | + | chr8_1:38392653-38392672 | None:intergenic | 40.0% | |
AACTCCGTGTTCACAAATTC+AGG | + | chr8_1:38392836-38392855 | None:intergenic | 40.0% | |
ACAATCTTCCAACAGAAAGC+AGG | - | chr8_1:38392891-38392910 | Msa1192530:intron | 40.0% | |
ATTGCATCCTCGATAGTCAT+AGG | + | chr8_1:38392938-38392957 | None:intergenic | 40.0% | |
TTCTTTCTTGAATCCCAAGG+CGG | + | chr8_1:38392983-38393002 | None:intergenic | 40.0% | |
ACTCAACTCTGTGATAGACT+AGG | - | chr8_1:38393037-38393056 | Msa1192530:intron | 40.0% | |
AACTCTGTGATAGACTAGGA+AGG | - | chr8_1:38393041-38393060 | Msa1192530:intron | 40.0% | |
ACTCTGTGATAGACTAGGAA+GGG | - | chr8_1:38393042-38393061 | Msa1192530:intron | 40.0% | |
TCCACACAAGATTCAAACCA+CGG | + | chr8_1:38393129-38393148 | None:intergenic | 40.0% | |
AAGATAAGCTCCAAGTGTTC+GGG | + | chr8_1:38393181-38393200 | None:intergenic | 40.0% | |
GAACACTTGGAGCTTATCTT+AGG | - | chr8_1:38393181-38393200 | Msa1192530:intron | 40.0% | |
CAGTACGAGTGTGATTCAAA+GGG | + | chr8_1:38393210-38393229 | None:intergenic | 40.0% | |
TCAGTACGAGTGTGATTCAA+AGG | + | chr8_1:38393211-38393230 | None:intergenic | 40.0% | |
AGCTTCCAGACAGATACATT+AGG | - | chr8_1:38393271-38393290 | Msa1192530:intron | 40.0% | |
GGAAAATTCTTGAGAAGTGG+TGG | - | chr8_1:38393443-38393462 | Msa1192530:intron | 40.0% | |
TTCAATCTGAACCAAAGTCC+CGG | + | chr8_1:38393485-38393504 | None:intergenic | 40.0% | |
ACTTGATGAGGTCTGACAAT+TGG | + | chr8_1:38393601-38393620 | None:intergenic | 40.0% | |
ATTGTCAGACCTCATCAAGT+TGG | - | chr8_1:38393601-38393620 | Msa1192530:intron | 40.0% | |
GCAGGTACTTCAAATGGAAG+AGG | - | chr8_1:38386962-38386981 | Msa1192530:CDS | 45.0% | |
GGTACTTCAAATGGAAGAGG+AGG | - | chr8_1:38386965-38386984 | Msa1192530:CDS | 45.0% | |
ATGAACTTGCAGCAGTTTCC+TGG | + | chr8_1:38387327-38387346 | None:intergenic | 45.0% | |
GAAACTGCTGCAAGTTCATC+CGG | - | chr8_1:38387328-38387347 | Msa1192530:CDS | 45.0% | |
GAATCCTCGTACTTTGCTTC+CGG | + | chr8_1:38387350-38387369 | None:intergenic | 45.0% | |
ATTGGAATGGGATTCTTGCC+CGG | - | chr8_1:38387373-38387392 | Msa1192530:CDS | 45.0% | |
TGGTGACTCATCAGATTCTC+TGG | - | chr8_1:38387770-38387789 | Msa1192530:CDS | 45.0% | |
GACTCATCAGATTCTCTGGA+AGG | - | chr8_1:38387774-38387793 | Msa1192530:CDS | 45.0% | |
AAAACCGCTTCTTCATGGCT+AGG | + | chr8_1:38388167-38388186 | None:intergenic | 45.0% | |
CTACTGTGGGTGAAGTAACA+AGG | + | chr8_1:38388248-38388267 | None:intergenic | 45.0% | |
! | TTGAGTGTTCTGGACGTGAA+GGG | - | chr8_1:38388290-38388309 | Msa1192530:intron | 45.0% |
! | ACAACCGGACATTTGAAGTG+TGG | + | chr8_1:38388338-38388357 | None:intergenic | 45.0% |
AACACTCTCACACTCACAAC+CGG | + | chr8_1:38388353-38388372 | None:intergenic | 45.0% | |
GATGATGAATTTCTCCGTGG+AGG | - | chr8_1:38389363-38389382 | Msa1192530:intron | 45.0% | |
! | TGCTGAGTTCTAATCTCCTC+AGG | + | chr8_1:38389621-38389640 | None:intergenic | 45.0% |
GATTAGAACTCAGCACCTTG+AGG | - | chr8_1:38389626-38389645 | Msa1192530:intron | 45.0% | |
AGCTTAGCGTTGTAACCTCA+AGG | + | chr8_1:38389644-38389663 | None:intergenic | 45.0% | |
TAGCACCTCAAGTGTGATGT+AGG | - | chr8_1:38389677-38389696 | Msa1192530:intron | 45.0% | |
CTTACCTCACTAGGTGGAAT+CGG | + | chr8_1:38389963-38389982 | None:intergenic | 45.0% | |
AAGATGAAGTCTACCAGCTC+AGG | + | chr8_1:38390162-38390181 | None:intergenic | 45.0% | |
AAAACCTCTTCAACCCTTGG+AGG | + | chr8_1:38390833-38390852 | None:intergenic | 45.0% | |
GGAGATGAATATCTCCTCCA+TGG | - | chr8_1:38390926-38390945 | Msa1192530:intron | 45.0% | |
TATTGTGAACGGGAAACCCA+TGG | + | chr8_1:38390946-38390965 | None:intergenic | 45.0% | |
AAAAGAGCCCTTAGGGCTAA+GGG | + | chr8_1:38391277-38391296 | None:intergenic | 45.0% | |
TAAAAGAGCCCTTAGGGCTA+AGG | + | chr8_1:38391278-38391297 | None:intergenic | 45.0% | |
GTCATGCTAAAAGAGCCCTT+AGG | + | chr8_1:38391285-38391304 | None:intergenic | 45.0% | |
CATTGCTAATCTGTGATCCC+AGG | + | chr8_1:38391475-38391494 | None:intergenic | 45.0% | |
ACCGTCACAGGTGTAATTCT+TGG | - | chr8_1:38391992-38392011 | Msa1192530:intron | 45.0% | |
CCCAAGAATTACACCTGTGA+CGG | + | chr8_1:38391996-38392015 | None:intergenic | 45.0% | |
CCGTCACAGGTGTAATTCTT+GGG | - | chr8_1:38391993-38392012 | Msa1192530:intron | 45.0% | |
TTGTTTCCCTAGTATCCCTC+TGG | - | chr8_1:38392374-38392393 | Msa1192530:intron | 45.0% | |
CCAAGAATAAGAAGGACCAG+AGG | + | chr8_1:38392393-38392412 | None:intergenic | 45.0% | |
CCTCTGGTCCTTCTTATTCT+TGG | - | chr8_1:38392390-38392409 | Msa1192530:intron | 45.0% | |
CGATATGTATGGTACAGCAG+AGG | - | chr8_1:38392430-38392449 | Msa1192530:intron | 45.0% | |
TACAGCAGAGGTCAAAGTTG+AGG | - | chr8_1:38392442-38392461 | Msa1192530:intron | 45.0% | |
AGTCAAGGCAGGTCAACTTA+GGG | - | chr8_1:38392486-38392505 | Msa1192530:intron | 45.0% | |
!!! | AAGCCTGGTTTTACGTCATC+GGG | + | chr8_1:38392563-38392582 | None:intergenic | 45.0% |
GTAACAAATCAACTCCCTCC+AGG | - | chr8_1:38392702-38392721 | Msa1192530:intron | 45.0% | |
ACACTACTTAGAGACCTGGA+GGG | + | chr8_1:38392719-38392738 | None:intergenic | 45.0% | |
AACACTACTTAGAGACCTGG+AGG | + | chr8_1:38392720-38392739 | None:intergenic | 45.0% | |
TGCAACACTACTTAGAGACC+TGG | + | chr8_1:38392723-38392742 | None:intergenic | 45.0% | |
TCGGCCTTGAACAGAATAGA+AGG | - | chr8_1:38392860-38392879 | Msa1192530:intron | 45.0% | |
ATGTGGAACCTGCTTTCTGT+TGG | + | chr8_1:38392902-38392921 | None:intergenic | 45.0% | |
!! | TAGGTGGCTTTGGAAGAATG+TGG | + | chr8_1:38392919-38392938 | None:intergenic | 45.0% |
TCGATAGTCATAGGTGGCTT+TGG | + | chr8_1:38392929-38392948 | None:intergenic | 45.0% | |
AAAGCCACCTATGACTATCG+AGG | - | chr8_1:38392928-38392947 | Msa1192530:intron | 45.0% | |
CAATTCCCCGGACAAAGAAA+TGG | - | chr8_1:38392954-38392973 | Msa1192530:CDS | 45.0% | |
GGTTTGAATCTTGTGTGGAC+TGG | - | chr8_1:38393130-38393149 | Msa1192530:intron | 45.0% | |
TCCAATAGAACCCGAACACT+TGG | - | chr8_1:38393168-38393187 | Msa1192530:intron | 45.0% | |
! | TCCAAGTGTTCGGGTTCTAT+TGG | + | chr8_1:38393172-38393191 | None:intergenic | 45.0% |
!! | TTGAAGCCCATTTTTCCTGC+TGG | - | chr8_1:38393310-38393329 | Msa1192530:CDS | 45.0% |
GTCACTCCAGCAGGAAAAAT+GGG | + | chr8_1:38393319-38393338 | None:intergenic | 45.0% | |
AGTCACTCCAGCAGGAAAAA+TGG | + | chr8_1:38393320-38393339 | None:intergenic | 45.0% | |
!! | TTTATACTATATTTAAATTA+AGG | - | chr8_1:38391096-38391115 | Msa1192530:intron | 5.0% |
!! | TTATACTATATTTAAATTAA+GGG | - | chr8_1:38391097-38391116 | Msa1192530:intron | 5.0% |
GTGAGTGGGGAATACCTGAT+CGG | + | chr8_1:38386531-38386550 | None:intergenic | 50.0% | |
ATCAGGTATTCCCCACTCAC+CGG | - | chr8_1:38386531-38386550 | Msa1192530:three_prime_UTR | 50.0% | |
GTGAGTGTGAGAAGGGAAAG+TGG | + | chr8_1:38386559-38386578 | None:intergenic | 50.0% | |
ATGGCTAGGTCATGTTGTGG+AGG | - | chr8_1:38386826-38386845 | Msa1192530:CDS | 50.0% | |
TGGCTAGGTCATGTTGTGGA+GGG | - | chr8_1:38386827-38386846 | Msa1192530:CDS | 50.0% | |
TCATCCGGAAGCAAAGTACG+AGG | - | chr8_1:38387343-38387362 | Msa1192530:CDS | 50.0% | |
CTTCTGTTTACTCGACCGTC+TGG | - | chr8_1:38387921-38387940 | Msa1192530:CDS | 50.0% | |
CATACAGAATGGGAGAGGGA+AGG | + | chr8_1:38388027-38388046 | None:intergenic | 50.0% | |
! | TCTGACGTGTGGACTACTGT+GGG | + | chr8_1:38388261-38388280 | None:intergenic | 50.0% |
! | ATCTGACGTGTGGACTACTG+TGG | + | chr8_1:38388262-38388281 | None:intergenic | 50.0% |
! | GTTGAGTGTTCTGGACGTGA+AGG | - | chr8_1:38388289-38388308 | Msa1192530:intron | 50.0% |
! | TGAGTGTTCTGGACGTGAAG+GGG | - | chr8_1:38388291-38388310 | Msa1192530:intron | 50.0% |
! | TGACTTGGGTTGTGTTCGCA+AGG | - | chr8_1:38388395-38388414 | Msa1192530:intron | 50.0% |
! | CCTGACACAATGAAGCACCT+TGG | + | chr8_1:38388516-38388535 | None:intergenic | 50.0% |
! | CCAAGGTGCTTCATTGTGTC+AGG | - | chr8_1:38388513-38388532 | Msa1192530:CDS | 50.0% |
TGTCAGGAACTCCCAAGACT+AGG | - | chr8_1:38388529-38388548 | Msa1192530:CDS | 50.0% | |
GTGCATCGTCCTGGTAAGAA+TGG | - | chr8_1:38388824-38388843 | Msa1192530:CDS | 50.0% | |
ACTAGGTGGAATCGGCTACA+TGG | + | chr8_1:38389955-38389974 | None:intergenic | 50.0% | |
CGATTCCACCTAGTGAGGTA+AGG | - | chr8_1:38389961-38389980 | Msa1192530:intron | 50.0% | |
AAGTCTACCAGCTCAGGAAC+TGG | + | chr8_1:38390156-38390175 | None:intergenic | 50.0% | |
GTTTCCTCCAAGGGTTGAAG+AGG | - | chr8_1:38390826-38390845 | Msa1192530:intron | 50.0% | |
!! | GGGCTAAGGGCACTTGTTAA+AGG | + | chr8_1:38391264-38391283 | None:intergenic | 50.0% |
AACAAGTGCCCTTAGCCCTA+AGG | - | chr8_1:38391266-38391285 | Msa1192530:intron | 50.0% | |
ACAAGTGCCCTTAGCCCTAA+GGG | - | chr8_1:38391267-38391286 | Msa1192530:intron | 50.0% | |
GAAGGACCAGAGGGATACTA+GGG | + | chr8_1:38392383-38392402 | None:intergenic | 50.0% | |
AGAAGGACCAGAGGGATACT+AGG | + | chr8_1:38392384-38392403 | None:intergenic | 50.0% | |
GCCATGAACCTTCACAGTCA+AGG | - | chr8_1:38392471-38392490 | Msa1192530:intron | 50.0% | |
GCCTTGACTGTGAAGGTTCA+TGG | + | chr8_1:38392475-38392494 | None:intergenic | 50.0% | |
TGAACCTTCACAGTCAAGGC+AGG | - | chr8_1:38392475-38392494 | Msa1192530:intron | 50.0% | |
TTGACCTGCCTTGACTGTGA+AGG | + | chr8_1:38392482-38392501 | None:intergenic | 50.0% | |
CAGTCAAGGCAGGTCAACTT+AGG | - | chr8_1:38392485-38392504 | Msa1192530:intron | 50.0% | |
GTCAAGGCAGGTCAACTTAG+GGG | - | chr8_1:38392487-38392506 | Msa1192530:intron | 50.0% | |
CAGGTCAACTTAGGGGAAAC+TGG | - | chr8_1:38392494-38392513 | Msa1192530:intron | 50.0% | |
AACTTAGGGGAAACTGGCAC+TGG | - | chr8_1:38392500-38392519 | Msa1192530:intron | 50.0% | |
TTCCCCGATGACGTAAAACC+AGG | - | chr8_1:38392557-38392576 | Msa1192530:CDS | 50.0% | |
!!! | AGCCTGGTTTTACGTCATCG+GGG | + | chr8_1:38392562-38392581 | None:intergenic | 50.0% |
GCATCCTCGATAGTCATAGG+TGG | + | chr8_1:38392935-38392954 | None:intergenic | 50.0% | |
CTATCGAGGATGCAATTCCC+CGG | - | chr8_1:38392942-38392961 | Msa1192530:intron | 50.0% | |
TTCCCCGGACAAAGAAATGG+TGG | - | chr8_1:38392957-38392976 | Msa1192530:CDS | 50.0% | |
AAAGAAATGGTGGCCGCCTT+GGG | - | chr8_1:38392967-38392986 | Msa1192530:CDS | 50.0% | |
TGTGAGTATTCCCCCAGAGT+CGG | + | chr8_1:38393074-38393093 | None:intergenic | 50.0% | |
GACATTCTTCGGTATTGCCG+TGG | - | chr8_1:38393109-38393128 | Msa1192530:intron | 50.0% | |
GCCGTGGTTTGAATCTTGTG+TGG | - | chr8_1:38393125-38393144 | Msa1192530:intron | 50.0% | |
TTCTGGACAAACCGGGACTT+TGG | - | chr8_1:38393471-38393490 | Msa1192530:intron | 50.0% | |
CTGACAATTGGCTGAGAGCA+TGG | + | chr8_1:38393589-38393608 | None:intergenic | 50.0% | |
!! | GTCAGACCTCATCAAGTTGG+AGG | - | chr8_1:38393604-38393623 | Msa1192530:intron | 50.0% |
GAGAGACCTCCAACTTGATG+AGG | + | chr8_1:38393613-38393632 | None:intergenic | 50.0% | |
TAAGAGCTCTGTGCGAAAGG+AGG | - | chr8_1:38393683-38393702 | Msa1192530:intron | 50.0% | |
!! | AAACAGGGTTCGGTGCGTCT+AGG | + | chr8_1:38386447-38386466 | None:intergenic | 55.0% |
GGGAATACCTGATCGGAGAG+GGG | + | chr8_1:38386524-38386543 | None:intergenic | 55.0% | |
GGGGAATACCTGATCGGAGA+GGG | + | chr8_1:38386525-38386544 | None:intergenic | 55.0% | |
TGGGGAATACCTGATCGGAG+AGG | + | chr8_1:38386526-38386545 | None:intergenic | 55.0% | |
GTGAGAAGGGAAAGTGGCAC+CGG | + | chr8_1:38386553-38386572 | None:intergenic | 55.0% | |
CAGAATGGGAGAGGGAAGGA+TGG | + | chr8_1:38388023-38388042 | None:intergenic | 55.0% | |
ATGTCCGCGGTTGAGTGTTC+TGG | - | chr8_1:38388280-38388299 | Msa1192530:intron | 55.0% | |
ACGTCCAGAACACTCAACCG+CGG | + | chr8_1:38388287-38388306 | None:intergenic | 55.0% | |
! | CACTTGAGGTGCTAGCTCAG+TGG | + | chr8_1:38389671-38389690 | None:intergenic | 55.0% |
! | GTAGCCGATTCCACCTAGTG+AGG | - | chr8_1:38389956-38389975 | Msa1192530:intron | 55.0% |
CCAAGCCTTACCTCACTAGG+TGG | + | chr8_1:38389969-38389988 | None:intergenic | 55.0% | |
CCACCTAGTGAGGTAAGGCT+TGG | - | chr8_1:38389966-38389985 | Msa1192530:intron | 55.0% | |
CCACCAAGCCTTACCTCACT+AGG | + | chr8_1:38389972-38389991 | None:intergenic | 55.0% | |
CCTAGTGAGGTAAGGCTTGG+TGG | - | chr8_1:38389969-38389988 | Msa1192530:intron | 55.0% | |
! | TAAAGCGCCAGTTCCTGAGC+TGG | - | chr8_1:38390146-38390165 | Msa1192530:CDS | 55.0% |
TGTGAACGGGAAACCCATGG+AGG | + | chr8_1:38390943-38390962 | None:intergenic | 55.0% | |
!! | GGAAACTGGCACTGGCGAAA+GGG | - | chr8_1:38392508-38392527 | Msa1192530:intron | 55.0% |
GGCCACCATTTCTTTGTCCG+GGG | + | chr8_1:38392962-38392981 | None:intergenic | 55.0% | |
CGGCCACCATTTCTTTGTCC+GGG | + | chr8_1:38392963-38392982 | None:intergenic | 55.0% | |
GCGGCCACCATTTCTTTGTC+CGG | + | chr8_1:38392964-38392983 | None:intergenic | 55.0% | |
CAAAGAAATGGTGGCCGCCT+TGG | - | chr8_1:38392966-38392985 | Msa1192530:CDS | 55.0% | |
GACAACAGAGTCACTCCAGC+AGG | + | chr8_1:38393328-38393347 | None:intergenic | 55.0% | |
GAAGTTGCACTTCACCGCCT+TGG | - | chr8_1:38393373-38393392 | Msa1192530:CDS | 55.0% | |
TCGAGACTTCCGCAACGAAG+AGG | - | chr8_1:38393422-38393441 | Msa1192530:intron | 55.0% | |
!! | TGGCGCAGTTCTGGACAAAC+CGG | - | chr8_1:38393463-38393482 | Msa1192530:intron | 55.0% |
GGGTAAGAGCTCTGTGCGAA+AGG | - | chr8_1:38393680-38393699 | Msa1192530:intron | 55.0% | |
!! | TCCTCTTCTGGAGCGAGTGC+AGG | - | chr8_1:38386479-38386498 | Msa1192530:three_prime_UTR | 60.0% |
ACCTGATCGGAGAGGGGAGA+GGG | + | chr8_1:38386518-38386537 | None:intergenic | 60.0% | |
TACCTGATCGGAGAGGGGAG+AGG | + | chr8_1:38386519-38386538 | None:intergenic | 60.0% | |
!! | GAAAGTGGCACCGGTGAGTG+GGG | + | chr8_1:38386544-38386563 | None:intergenic | 60.0% |
!! | GGAAAGTGGCACCGGTGAGT+GGG | + | chr8_1:38386545-38386564 | None:intergenic | 60.0% |
GTCCACACGTCAGATGTCCG+CGG | - | chr8_1:38388267-38388286 | Msa1192530:intron | 60.0% | |
AACCGCGGACATCTGACGTG+TGG | + | chr8_1:38388272-38388291 | None:intergenic | 60.0% | |
!! | GGGAAACTGGCACTGGCGAA+AGG | - | chr8_1:38392507-38392526 | Msa1192530:intron | 60.0% |
!! | TGGCACTGGCGAAAGGGTGA+AGG | - | chr8_1:38392514-38392533 | Msa1192530:CDS | 60.0% |
!! | GAAGGGCTCTTGCCGACTCT+GGG | - | chr8_1:38393059-38393078 | Msa1192530:intron | 60.0% |
!! | AAGGGCTCTTGCCGACTCTG+GGG | - | chr8_1:38393060-38393079 | Msa1192530:intron | 60.0% |
! | GAGAAGTGGTGGCGCAGTTC+TGG | - | chr8_1:38393454-38393473 | Msa1192530:intron | 60.0% |
!! | GGCGCAGTTCTGGACAAACC+GGG | - | chr8_1:38393464-38393483 | Msa1192530:intron | 60.0% |
GCCTGCACTCGCTCCAGAAG+AGG | + | chr8_1:38386483-38386502 | None:intergenic | 65.0% | |
TGATCGGAGAGGGGAGAGGG+TGG | + | chr8_1:38386515-38386534 | None:intergenic | 65.0% | |
ACCCTCTCCCCTCTCCGATC+AGG | - | chr8_1:38386514-38386533 | Msa1192530:three_prime_UTR | 65.0% | |
!! | GGGAAAGTGGCACCGGTGAG+TGG | + | chr8_1:38386546-38386565 | None:intergenic | 65.0% |
!! | GGAAGGGCTCTTGCCGACTC+TGG | - | chr8_1:38393058-38393077 | Msa1192530:intron | 65.0% |
!! | AGGGCTCTTGCCGACTCTGG+GGG | - | chr8_1:38393061-38393080 | Msa1192530:intron | 65.0% |
TCGGAGAGGGGAGAGGGTGG+AGG | + | chr8_1:38386512-38386531 | None:intergenic | 70.0% | |
!! | GGGGAGAGGGTGGAGGCGCG+TGG | + | chr8_1:38386505-38386524 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 38386413 | 38393959 | 38386413 | ID=Msa1192530;Name=Msa1192530 |
chr8_1 | mRNA | 38386413 | 38393959 | 38386413 | ID=Msa1192530-mRNA-1;Parent=Msa1192530;Name=Msa1192530-mRNA-1;_AED=0.04;_eAED=0.04;_QI=128|1|1|1|0.9|0.90|11|251|722 |
chr8_1 | exon | 38386413 | 38387986 | 38386413 | ID=Msa1192530-mRNA-1:exon:12542;Parent=Msa1192530-mRNA-1 |
chr8_1 | exon | 38388476 | 38388555 | 38388476 | ID=Msa1192530-mRNA-1:exon:12541;Parent=Msa1192530-mRNA-1 |
chr8_1 | exon | 38388788 | 38388887 | 38388788 | ID=Msa1192530-mRNA-1:exon:12540;Parent=Msa1192530-mRNA-1 |
chr8_1 | exon | 38390112 | 38390230 | 38390112 | ID=Msa1192530-mRNA-1:exon:12539;Parent=Msa1192530-mRNA-1 |
chr8_1 | exon | 38390960 | 38391059 | 38390960 | ID=Msa1192530-mRNA-1:exon:12538;Parent=Msa1192530-mRNA-1 |
chr8_1 | exon | 38391570 | 38391668 | 38391570 | ID=Msa1192530-mRNA-1:exon:12537;Parent=Msa1192530-mRNA-1 |
chr8_1 | exon | 38392512 | 38392607 | 38392512 | ID=Msa1192530-mRNA-1:exon:12536;Parent=Msa1192530-mRNA-1 |
chr8_1 | exon | 38392783 | 38392829 | 38392783 | ID=Msa1192530-mRNA-1:exon:12535;Parent=Msa1192530-mRNA-1 |
chr8_1 | exon | 38392948 | 38393044 | 38392948 | ID=Msa1192530-mRNA-1:exon:12534;Parent=Msa1192530-mRNA-1 |
chr8_1 | exon | 38393306 | 38393418 | 38393306 | ID=Msa1192530-mRNA-1:exon:12533;Parent=Msa1192530-mRNA-1 |
chr8_1 | exon | 38393837 | 38393959 | 38393837 | ID=Msa1192530-mRNA-1:exon:12532;Parent=Msa1192530-mRNA-1 |
chr8_1 | five_prime_UTR | 38393837 | 38393959 | 38393837 | ID=Msa1192530-mRNA-1:five_prime_utr;Parent=Msa1192530-mRNA-1 |
chr8_1 | five_prime_UTR | 38393414 | 38393418 | 38393414 | ID=Msa1192530-mRNA-1:five_prime_utr;Parent=Msa1192530-mRNA-1 |
chr8_1 | CDS | 38393306 | 38393413 | 38393306 | ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1 |
chr8_1 | CDS | 38392948 | 38393044 | 38392948 | ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1 |
chr8_1 | CDS | 38392783 | 38392829 | 38392783 | ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1 |
chr8_1 | CDS | 38392512 | 38392607 | 38392512 | ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1 |
chr8_1 | CDS | 38391570 | 38391668 | 38391570 | ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1 |
chr8_1 | CDS | 38390960 | 38391059 | 38390960 | ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1 |
chr8_1 | CDS | 38390112 | 38390230 | 38390112 | ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1 |
chr8_1 | CDS | 38388788 | 38388887 | 38388788 | ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1 |
chr8_1 | CDS | 38388476 | 38388555 | 38388476 | ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1 |
chr8_1 | CDS | 38386664 | 38387986 | 38386664 | ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1 |
chr8_1 | three_prime_UTR | 38386413 | 38386663 | 38386413 | ID=Msa1192530-mRNA-1:three_prime_utr;Parent=Msa1192530-mRNA-1 |
Gene Sequence |
Protein sequence |