AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1192530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1192530 MtrunA17_Chr4g0069001 97.649 723 16 1 1 722 87 809 0.0 1454
Msa1192530 MtrunA17_Chr5g0403561 43.505 331 181 4 395 721 260 588 4.04e-91 296
Msa1192530 MtrunA17_Chr6g0449921 44.411 331 178 4 395 721 258 586 5.25e-91 296
Msa1192530 MtrunA17_Chr3g0080571 43.505 331 181 4 395 721 279 607 3.50e-90 294
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1192530 AT3G17310.1 38.970 757 364 16 2 718 11 709 9.34e-159 476
Msa1192530 AT3G17310.2 38.970 757 364 16 2 718 11 709 9.34e-159 476
Msa1192530 AT3G17310.3 42.114 577 285 13 182 718 23 590 7.62e-137 416
Msa1192530 AT5G14620.1 46.789 327 168 4 395 717 297 621 4.55e-91 297
Msa1192530 AT5G15380.1 44.099 322 176 3 397 716 297 616 9.39e-85 280

Find 173 sgRNAs with CRISPR-Local

Find 494 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTGGTCCTTCTTATTCT+TGG 0.146437 8_1:-38387960 Msa1192530:CDS
ACTCTAGTCTTGATCCTTAT+TGG 0.153514 8_1:-38387714 Msa1192530:CDS
TGAGCATTGGGAAAGAAATT+TGG 0.167969 8_1:+38392522 None:intergenic
GTAGATATTTAGATGATTTC+AGG 0.184295 8_1:-38386438 Msa1192530:three_prime_UTR
TGACGTAAAACCAGGCTTTA+TGG 0.195385 8_1:-38387785 Msa1192530:CDS
GAGAATCTAATCAATAATTT+TGG 0.200516 8_1:-38386815 Msa1192530:CDS
TGAGCAACTCTTTGGAATTA+TGG 0.222568 8_1:-38388857 Msa1192530:CDS
GGAAGGGCTCTTGCCGACTC+TGG 0.243130 8_1:-38387292 Msa1192530:CDS
ACCATTTCTTCCACCCAATA+AGG 0.257946 8_1:+38387700 None:intergenic
AACGCTTCAGTTGTTTGAAA+TGG 0.264702 8_1:-38388830 Msa1192530:CDS
AAAGTACGAGGATTCTTTAT+TGG 0.278127 8_1:-38392995 Msa1192530:CDS
AGGAAAAGTGAAAGTGAAAC+AGG 0.279267 8_1:+38393890 None:intergenic
AACTCCGTGTTCACAAATTC+AGG 0.296850 8_1:+38387517 None:intergenic
GAGAAGTGGTGGCGCAGTTC+TGG 0.308120 8_1:-38386896 Msa1192530:CDS
CTCTAGTCTTGATCCTTATT+GGG 0.309389 8_1:-38387713 Msa1192530:CDS
AAGTTTGCAAGCTCTGAAAT+TGG 0.311536 8_1:+38388522 None:intergenic
ATATTCACATACCAAGTTTA+CGG 0.311744 8_1:+38390948 None:intergenic
AGCTCTGAAATTGGAACATC+TGG 0.311776 8_1:+38388531 None:intergenic
GAGCATTGGGAAAGAAATTT+GGG 0.320898 8_1:+38392523 None:intergenic
AACTGTAACTATTGTGAAAC+TGG 0.323997 8_1:-38387343 Msa1192530:CDS
ATTAGCAATGAGCAACTCTT+TGG 0.331436 8_1:-38388865 Msa1192530:CDS
GAACACTTGGAGCTTATCTT+AGG 0.331586 8_1:-38387169 Msa1192530:CDS
ATTTAAGAAAGTACCTCTTT+TGG 0.331834 8_1:+38391556 None:intergenic
TCCTCAGCAGTTGATAAATT+AGG 0.337137 8_1:-38388787 Msa1192530:intron
CGAAAGCTTATTTGATGATA+AGG 0.344802 8_1:-38391608 Msa1192530:CDS
TGAGTATGTGATGGAATATA+AGG 0.354316 8_1:-38388475 Msa1192530:intron
GCGGCCACCATTTCTTTGTC+CGG 0.355105 8_1:+38387389 None:intergenic
TCCCTTGAAAGAGCAGTATA+AGG 0.369565 8_1:+38393313 None:intergenic
TCCAAGTGTTCGGGTTCTAT+TGG 0.370632 8_1:+38387181 None:intergenic
ATAACCTTCTATTCTGTTCA+AGG 0.378544 8_1:+38387486 None:intergenic
GAATCCTCGTACTTTGCTTC+CGG 0.378724 8_1:+38393003 None:intergenic
CGAGGATTCTTTATTGGAAT+GGG 0.382883 8_1:-38392989 Msa1192530:CDS
GAAGGGCTCTTGCCGACTCT+GGG 0.385462 8_1:-38387291 Msa1192530:CDS
CACCTTATACTGCTCTTTCA+AGG 0.387017 8_1:-38393315 Msa1192530:CDS
TCGGCCTTGAACAGAATAGA+AGG 0.390848 8_1:-38387490 Msa1192530:CDS
TTATCATCATATTCATACTT+TGG 0.391787 8_1:+38387742 None:intergenic
CAAAGAAATGGTGGCCGCCT+TGG 0.394865 8_1:-38387384 Msa1192530:CDS
TAAGATAAGCTCCAAGTGTT+CGG 0.397680 8_1:+38387171 None:intergenic
ACGCTTCAGTTGTTTGAAAT+GGG 0.402332 8_1:-38388829 Msa1192530:CDS
CAGGTCAACTTAGGGGAAAC+TGG 0.403855 8_1:-38387856 Msa1192530:CDS
TCCTCTTCTGGAGCGAGTGC+AGG 0.406222 8_1:-38393871 Msa1192530:five_prime_UTR
TGATTGATCATGGAAACTTC+TGG 0.406406 8_1:+38391580 None:intergenic
TGGTGACTCATCAGATTCTC+TGG 0.409807 8_1:-38392580 Msa1192530:CDS
TCGATAGTCATAGGTGGCTT+TGG 0.411332 8_1:+38387424 None:intergenic
CAGTCAAGGCAGGTCAACTT+AGG 0.416868 8_1:-38387865 Msa1192530:CDS
GCCTTGACTGTGAAGGTTCA+TGG 0.418064 8_1:+38387878 None:intergenic
CAAACATAACATATGACTCT+TGG 0.424521 8_1:-38387573 Msa1192530:CDS
CGGCCACCATTTCTTTGTCC+GGG 0.428659 8_1:+38387390 None:intergenic
AAAGAAATGGTGGCCGCCTT+GGG 0.429022 8_1:-38387383 Msa1192530:CDS
AAGATAAGCTCCAAGTGTTC+GGG 0.435267 8_1:+38387172 None:intergenic
AGAGATTCTCTTGAGATGTT+CGG 0.439855 8_1:-38392782 Msa1192530:intron
TTTAATGTATACAGGTGAAA+TGG 0.440766 8_1:-38393410 Msa1192530:intron
TTCTGGACAAACCGGGACTT+TGG 0.442218 8_1:-38386879 Msa1192530:CDS
TTGTTTCCCTAGTATCCCTC+TGG 0.442633 8_1:-38387976 Msa1192530:intron
ACCCTCTCCCCTCTCCGATC+AGG 0.446441 8_1:-38393836 Msa1192530:intron
TGGCGCAGTTCTGGACAAAC+CGG 0.447348 8_1:-38386887 Msa1192530:CDS
CAAATGTTATGTTCGAGAAA+AGG 0.448764 8_1:-38390114 Msa1192530:CDS
ACGAGGATTCTTTATTGGAA+TGG 0.452315 8_1:-38392990 Msa1192530:CDS
AACAGCAGAAAGACATTCTT+CGG 0.452611 8_1:-38387252 Msa1192530:CDS
TCCTTATTGGGTGGAAGAAA+TGG 0.453168 8_1:-38387701 Msa1192530:CDS
GAAACTGCTGCAAGTTCATC+CGG 0.459685 8_1:-38393022 Msa1192530:CDS
GAAATGGCAGGTACTTCAAA+TGG 0.459748 8_1:-38393394 Msa1192530:CDS
AGTCAAGGCAGGTCAACTTA+GGG 0.459928 8_1:-38387864 Msa1192530:CDS
AAGTCTACCAGCTCAGGAAC+TGG 0.461859 8_1:+38390197 None:intergenic
TAGATATTTAGATGATTTCA+GGG 0.463443 8_1:-38386437 Msa1192530:three_prime_UTR
TCGGAGAGGGGAGAGGGTGG+AGG 0.466304 8_1:+38393841 None:intergenic
CAATTCCCCGGACAAAGAAA+TGG 0.471097 8_1:-38387396 Msa1192530:CDS
GAATTTGCAATCCGTAAACT+TGG 0.475225 8_1:-38390959 Msa1192530:intron
GATATCCTAATGTATCTGTC+TGG 0.476951 8_1:+38387074 None:intergenic
TGGAAAATGATAGAAATAAG+AGG 0.479736 8_1:-38387765 Msa1192530:CDS
ACTTGATGAGGTCTGACAAT+TGG 0.481963 8_1:+38386752 None:intergenic
TCCCAATGCTCATTCAAAAG+AGG 0.483461 8_1:-38392511 Msa1192530:intron
ATTGCATCCTCGATAGTCAT+AGG 0.484160 8_1:+38387415 None:intergenic
GGGAAACTGGCACTGGCGAA+AGG 0.484897 8_1:-38387843 Msa1192530:CDS
GAAGTTGCACTTCACCGCCT+TGG 0.486284 8_1:-38386977 Msa1192530:CDS
CATGATCAATCAACCAAAAG+AGG 0.486994 8_1:-38391569 Msa1192530:intron
TCCAATAGAACCCGAACACT+TGG 0.490251 8_1:-38387182 Msa1192530:CDS
GGAAACTGGCACTGGCGAAA+GGG 0.493821 8_1:-38387842 Msa1192530:CDS
AGGGCTCTTGCCGACTCTGG+GGG 0.496608 8_1:-38387289 Msa1192530:CDS
GGGGAATACCTGATCGGAGA+GGG 0.500679 8_1:+38393828 None:intergenic
ATTGGAATGGGATTCTTGCC+CGG 0.504717 8_1:-38392977 Msa1192530:CDS
AACTTCTTTCTTGAATCCCA+AGG 0.510232 8_1:+38387367 None:intergenic
TATAACTTTATCAACAAGAC+CGG 0.510372 8_1:+38392958 None:intergenic
TTCAATCTGAACCAAAGTCC+CGG 0.511184 8_1:+38386868 None:intergenic
ACCTTATACTGCTCTTTCAA+GGG 0.513019 8_1:-38393314 Msa1192530:CDS
TCAGTACGAGTGTGATTCAA+AGG 0.513592 8_1:+38387142 None:intergenic
GAAGAACAAAGCGATATGTA+TGG 0.516685 8_1:-38387931 Msa1192530:CDS
AAGATGAAGTCTACCAGCTC+AGG 0.519697 8_1:+38390191 None:intergenic
AGCTTCCAGACAGATACATT+AGG 0.521672 8_1:-38387079 Msa1192530:CDS
CTGACAATTGGCTGAGAGCA+TGG 0.521901 8_1:+38386764 None:intergenic
GGGGAGAGGGTGGAGGCGCG+TGG 0.528563 8_1:+38393848 None:intergenic
TTGTTAATGCTACAGACAAA+TGG 0.531210 8_1:-38392600 Msa1192530:intron
GTCAGACCTCATCAAGTTGG+AGG 0.531641 8_1:-38386746 Msa1192530:CDS
ACCTGATCGGAGAGGGGAGA+GGG 0.535089 8_1:+38393835 None:intergenic
TACCTGATCGGAGAGGGGAG+AGG 0.536435 8_1:+38393834 None:intergenic
GCCTGCACTCGCTCCAGAAG+AGG 0.539337 8_1:+38393870 None:intergenic
GATAAAGTTATAGAAGAGAA+TGG 0.542439 8_1:-38392947 Msa1192530:intron
ATGTGGAACCTGCTTTCTGT+TGG 0.543734 8_1:+38387451 None:intergenic
AAACAGGGTTCGGTGCGTCT+AGG 0.543756 8_1:+38393906 None:intergenic
GGAGAAATTCATCATCAGTA+AGG 0.546193 8_1:+38390994 None:intergenic
AACTTAGGGGAAACTGGCAC+TGG 0.550464 8_1:-38387850 Msa1192530:CDS
GCCATGAACCTTCACAGTCA+AGG 0.552031 8_1:-38387879 Msa1192530:CDS
GACAACAGAGTCACTCCAGC+AGG 0.553683 8_1:+38387025 None:intergenic
CATTAGAGAAACACAGAGAT+GGG 0.554898 8_1:+38386471 None:intergenic
TTCCCCGATGACGTAAAACC+AGG 0.555837 8_1:-38387793 Msa1192530:CDS
TGCAAATTCAACTTCCTCCA+CGG 0.556320 8_1:+38390973 None:intergenic
TGATCGGAGAGGGGAGAGGG+TGG 0.560320 8_1:+38393838 None:intergenic
TAAAGCGCCAGTTCCTGAGC+TGG 0.563833 8_1:-38390204 Msa1192530:CDS
TGAACCTTCACAGTCAAGGC+AGG 0.565747 8_1:-38387875 Msa1192530:CDS
ATTGTCAGACCTCATCAAGT+TGG 0.567706 8_1:-38386749 Msa1192530:CDS
GTTTCTCTAATGTTAACTGT+TGG 0.568325 8_1:-38386460 Msa1192530:three_prime_UTR
GACTCATCAGATTCTCTGGA+AGG 0.569319 8_1:-38392576 Msa1192530:CDS
ACCTAATTTATCAACTGCTG+AGG 0.571284 8_1:+38388786 None:intergenic
TCTTTGATCCAAGAATAAGA+AGG 0.571878 8_1:+38387952 None:intergenic
GCAGGTACTTCAAATGGAAG+AGG 0.572697 8_1:-38393388 Msa1192530:CDS
ACAATCTTCCAACAGAAAGC+AGG 0.576524 8_1:-38387459 Msa1192530:CDS
AGTGAAAGTGAAACAGGGTT+CGG 0.576797 8_1:+38393896 None:intergenic
GGGTAAGAGCTCTGTGCGAA+AGG 0.578382 8_1:-38386670 Msa1192530:CDS
GGCCACCATTTCTTTGTCCG+GGG 0.578470 8_1:+38387391 None:intergenic
AAGGGCTCTTGCCGACTCTG+GGG 0.578816 8_1:-38387290 Msa1192530:CDS
TAGTCTTGATCCTTATTGGG+TGG 0.580016 8_1:-38387710 Msa1192530:CDS
GGTTTGAATCTTGTGTGGAC+TGG 0.583346 8_1:-38387220 Msa1192530:CDS
CAGTACGAGTGTGATTCAAA+GGG 0.584543 8_1:+38387143 None:intergenic
GGCGCAGTTCTGGACAAACC+GGG 0.584961 8_1:-38386886 Msa1192530:CDS
ATGTATACAGGTGAAATGGC+AGG 0.586800 8_1:-38393406 Msa1192530:intron
ATGTTATGTTCGAGAAAAGG+AGG 0.591403 8_1:-38390111 Msa1192530:intron
ATGGATTCTGATAAATGACC+AGG 0.592207 8_1:+38386783 None:intergenic
ACATTAGAGAAACACAGAGA+TGG 0.593034 8_1:+38386470 None:intergenic
AACTCTGTGATAGACTAGGA+AGG 0.598049 8_1:-38387309 Msa1192530:CDS
TGGCACTGGCGAAAGGGTGA+AGG 0.598779 8_1:-38387836 Msa1192530:CDS
TAAAATAAAAGCTCTCGTCT+CGG 0.599228 8_1:-38386951 Msa1192530:CDS
GGAAAATTCTTGAGAAGTGG+TGG 0.603929 8_1:-38386907 Msa1192530:CDS
GACATTCTTCGGTATTGCCG+TGG 0.605280 8_1:-38387241 Msa1192530:CDS
AAATGGGATTGAGTATGTGA+TGG 0.610661 8_1:-38388484 Msa1192530:CDS
ATAACTTTATCAACAAGACC+GGG 0.615971 8_1:+38392959 None:intergenic
TACAGCAGAGGTCAAAGTTG+AGG 0.616225 8_1:-38387908 Msa1192530:CDS
CGTCTTGAAGTAACTTATGT+CGG 0.616986 8_1:-38386639 Msa1192530:three_prime_UTR
GTCAAGGCAGGTCAACTTAG+GGG 0.618687 8_1:-38387863 Msa1192530:CDS
GCCGTGGTTTGAATCTTGTG+TGG 0.619304 8_1:-38387225 Msa1192530:CDS
CAAGAATAAGAAGGACCAGA+GGG 0.622260 8_1:+38387961 None:intergenic
AGAGGAAAATTCTTGAGAAG+TGG 0.622368 8_1:-38386910 Msa1192530:CDS
TGTAACTATTGTGAAACTGG+TGG 0.622892 8_1:-38387340 Msa1192530:CDS
TAAGAGCTCTGTGCGAAAGG+AGG 0.623191 8_1:-38386667 Msa1192530:CDS
GAGAGACCTCCAACTTGATG+AGG 0.623618 8_1:+38386740 None:intergenic
GGGAATACCTGATCGGAGAG+GGG 0.627811 8_1:+38393829 None:intergenic
ACTCAACTCTGTGATAGACT+AGG 0.628836 8_1:-38387313 Msa1192530:CDS
TTGACCTGCCTTGACTGTGA+AGG 0.630560 8_1:+38387871 None:intergenic
TGAACCTGAATTTGTGAACA+CGG 0.631197 8_1:-38387521 Msa1192530:CDS
CCAAGAATAAGAAGGACCAG+AGG 0.631580 8_1:+38387960 None:intergenic
TTCCCCGGACAAAGAAATGG+TGG 0.631839 8_1:-38387393 Msa1192530:CDS
ACTCTGTGATAGACTAGGAA+GGG 0.632476 8_1:-38387308 Msa1192530:CDS
GGTACTTCAAATGGAAGAGG+AGG 0.632591 8_1:-38393385 Msa1192530:CDS
CTATCGAGGATGCAATTCCC+CGG 0.632973 8_1:-38387408 Msa1192530:CDS
TCGAGACTTCCGCAACGAAG+AGG 0.634540 8_1:-38386928 Msa1192530:CDS
GTAACAAATCAACTCCCTCC+AGG 0.635560 8_1:-38387648 Msa1192530:CDS
TGGACTGGTAAATATAAACT+CGG 0.637782 8_1:-38387205 Msa1192530:CDS
TGGGGAATACCTGATCGGAG+AGG 0.640323 8_1:+38393827 None:intergenic
TTTGTTACGTCTATACATTG+TGG 0.645554 8_1:+38387663 None:intergenic
GTGAGTGGGGAATACCTGAT+CGG 0.646590 8_1:+38393822 None:intergenic
TTCTTTCTTGAATCCCAAGG+CGG 0.649660 8_1:+38387370 None:intergenic
TGCAACACTACTTAGAGACC+TGG 0.657790 8_1:+38387630 None:intergenic
TCCACACAAGATTCAAACCA+CGG 0.660642 8_1:+38387224 None:intergenic
AACACTACTTAGAGACCTGG+AGG 0.669959 8_1:+38387633 None:intergenic
GGAAAAGTGAAAGTGAAACA+GGG 0.678104 8_1:+38393891 None:intergenic
TAGGTGGCTTTGGAAGAATG+TGG 0.684473 8_1:+38387434 None:intergenic
AAAGCCACCTATGACTATCG+AGG 0.684655 8_1:-38387422 Msa1192530:CDS
CGATATGTATGGTACAGCAG+AGG 0.685975 8_1:-38387920 Msa1192530:CDS
GATGATGAATTTCTCCGTGG+AGG 0.689500 8_1:-38390987 Msa1192530:CDS
GCATCCTCGATAGTCATAGG+TGG 0.694027 8_1:+38387418 None:intergenic
AAAACATCAAAAGAAGAACA+TGG 0.696972 8_1:+38386593 None:intergenic
ACTGATGATGAATTTCTCCG+TGG 0.719002 8_1:-38390990 Msa1192530:CDS
TCATCCGGAAGCAAAGTACG+AGG 0.728222 8_1:-38393007 Msa1192530:CDS
ACACTACTTAGAGACCTGGA+GGG 0.736672 8_1:+38387634 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAATTTTTTAAAAAATT+AGG + chr8_1:38387132-38387151 None:intergenic 0.0%
!! TTAATATTATATTATCTAAC+AGG + chr8_1:38390355-38390374 None:intergenic 10.0%
!!! AATAAACTATATTTTAAGAT+TGG - chr8_1:38390588-38390607 Msa1192530:intron 10.0%
!!! TTTTTTTCAATTTAATTCTT+GGG + chr8_1:38390864-38390883 None:intergenic 10.0%
!!! ATTTTTTTCAATTTAATTCT+TGG + chr8_1:38390865-38390884 None:intergenic 10.0%
!! TTGTATAATTTATATGTTGA+TGG - chr8_1:38386904-38386923 Msa1192530:CDS 15.0%
!! TGTATAATTTATATGTTGAT+GGG - chr8_1:38386905-38386924 Msa1192530:CDS 15.0%
!!! TTTCCAAATACATTTTTTAT+TGG - chr8_1:38387075-38387094 Msa1192530:CDS 15.0%
!! AATCCAATAAAAAATGTATT+TGG + chr8_1:38387081-38387100 None:intergenic 15.0%
!!! AAATACATTTTTTATTGGAT+TGG - chr8_1:38387080-38387099 Msa1192530:CDS 15.0%
!!! AAATTAGGTTTTCAAAATTA+GGG + chr8_1:38387117-38387136 None:intergenic 15.0%
!!! AAAATTAGGTTTTCAAAATT+AGG + chr8_1:38387118-38387137 None:intergenic 15.0%
!! CTATATTATAACATATGATT+TGG + chr8_1:38387602-38387621 None:intergenic 15.0%
!! ATGAAAAAACAACAAAAATA+TGG + chr8_1:38388579-38388598 None:intergenic 15.0%
!! ATCATTATTCAAATTCAAAA+TGG + chr8_1:38388860-38388879 None:intergenic 15.0%
!!! ATAAATATTTTCTTTCAAAC+AGG - chr8_1:38389029-38389048 Msa1192530:intron 15.0%
!!! ATTCTAACTATGAATAATTT+TGG - chr8_1:38389907-38389926 Msa1192530:intron 15.0%
!! ATATCTAATATCTAAATCTT+AGG + chr8_1:38390447-38390466 None:intergenic 15.0%
!! TTGTAACAATAACATAAATA+TGG + chr8_1:38390803-38390822 None:intergenic 15.0%
!! AATTATCTTGTATAAATAAG+GGG + chr8_1:38391027-38391046 None:intergenic 15.0%
!! GAATTATCTTGTATAAATAA+GGG + chr8_1:38391028-38391047 None:intergenic 15.0%
!! AGAATTATCTTGTATAAATA+AGG + chr8_1:38391029-38391048 None:intergenic 15.0%
!!! TTGCTTTTTAAAATTTCAAT+AGG + chr8_1:38391200-38391219 None:intergenic 15.0%
!! GATAAATAGATATTATTCAA+CGG - chr8_1:38392222-38392241 Msa1192530:intron 15.0%
!! AATTATTACTAAAAAATGAC+TGG + chr8_1:38392320-38392339 None:intergenic 15.0%
!! ACTAATTGAAATTGACATAT+TGG + chr8_1:38386634-38386653 None:intergenic 20.0%
!! ATATTGAGAAAAAAATGGTT+GGG + chr8_1:38386690-38386709 None:intergenic 20.0%
!! CAAACATATTGAGAAAAAAA+TGG + chr8_1:38386695-38386714 None:intergenic 20.0%
!!! GGAGAATTATTTTTTTCAAA+TGG + chr8_1:38387257-38387276 None:intergenic 20.0%
!! TCTAAATAATCAAATTGCTT+TGG + chr8_1:38388093-38388112 None:intergenic 20.0%
!!! GTTTTTAAATTTGTTGTTAC+TGG - chr8_1:38388182-38388201 Msa1192530:intron 20.0%
!!! TATGTTTTGTGTATATCTAT+TGG - chr8_1:38389265-38389284 Msa1192530:intron 20.0%
!!! GAAATATTTATTGATTCAAG+TGG - chr8_1:38389569-38389588 Msa1192530:intron 20.0%
!!! ATGATAGTTAAATTTTAGTC+TGG - chr8_1:38389838-38389857 Msa1192530:intron 20.0%
!! CTGAAATTTAAATAACTTCT+TGG - chr8_1:38390028-38390047 Msa1192530:intron 20.0%
!!! TTTCATTTTTTTAGCAATCT+GGG + chr8_1:38390190-38390209 None:intergenic 20.0%
!!! TTTTCATTTTTTTAGCAATC+TGG + chr8_1:38390191-38390210 None:intergenic 20.0%
!! GATTGCTAAAAAAATGAAAA+AGG - chr8_1:38390191-38390210 Msa1192530:CDS 20.0%
!! TAACAATAACATAAATATGG+TGG + chr8_1:38390800-38390819 None:intergenic 20.0%
!!! TTTTATTGAAAGATTGAGAA+AGG - chr8_1:38390891-38390910 Msa1192530:intron 20.0%
!! ATTATCTTGTATAAATAAGG+GGG + chr8_1:38391026-38391045 None:intergenic 20.0%
!!! ACTTGTTAAAGGTTAAAAAA+TGG + chr8_1:38391253-38391272 None:intergenic 20.0%
!! GAGATTAAGTATGATTAAAA+AGG + chr8_1:38391372-38391391 None:intergenic 20.0%
!! AAAAATTAGATGCATAACAA+AGG + chr8_1:38391448-38391467 None:intergenic 20.0%
!! AATTCATCTCATAATTCTAA+AGG + chr8_1:38391666-38391685 None:intergenic 20.0%
!!! GCATTTTTCAAGTTTATATA+AGG + chr8_1:38391714-38391733 None:intergenic 20.0%
!! ATAAGTCTAAATAAAGGAAA+TGG + chr8_1:38391744-38391763 None:intergenic 20.0%
!! ACAACTATAAGTCTAAATAA+AGG + chr8_1:38391750-38391769 None:intergenic 20.0%
!!! TTTGTTAGCTTACTATTAAT+TGG - chr8_1:38391783-38391802 Msa1192530:intron 20.0%
!! TATATTATGGTAAAATCATC+CGG + chr8_1:38392047-38392066 None:intergenic 20.0%
!!! CAACGGTAAATTTTATATTA+TGG + chr8_1:38392060-38392079 None:intergenic 20.0%
!! CATAATATAAAATTTACCGT+TGG - chr8_1:38392058-38392077 Msa1192530:intron 20.0%
!! ACAATAAGTTTATAATCGAA+TGG + chr8_1:38392165-38392184 None:intergenic 20.0%
!! TTAGTAATAATTGACTATTG+AGG - chr8_1:38392328-38392347 Msa1192530:intron 20.0%
!! TTATCATCATATTCATACTT+TGG + chr8_1:38392611-38392630 None:intergenic 20.0%
!!! GAGAATCTAATCAATAATTT+TGG - chr8_1:38393535-38393554 Msa1192530:intron 20.0%
!! TAGATATTTAGATGATTTCA+GGG - chr8_1:38393913-38393932 Msa1192530:five_prime_UTR 20.0%
! CATATTGAGAAAAAAATGGT+TGG + chr8_1:38386691-38386710 None:intergenic 25.0%
!!! TGCATTGATTTAATGTATAC+AGG - chr8_1:38386932-38386951 Msa1192530:CDS 25.0%
! TTTAATGTATACAGGTGAAA+TGG - chr8_1:38386940-38386959 Msa1192530:CDS 25.0%
! AAGTTAATGAAAAGTGATCA+AGG + chr8_1:38387278-38387297 None:intergenic 25.0%
! TATAACTTTATCAACAAGAC+CGG + chr8_1:38387395-38387414 None:intergenic 25.0%
! GATAAAGTTATAGAAGAGAA+TGG - chr8_1:38387403-38387422 Msa1192530:CDS 25.0%
!!! GTGGTTTTGATTGATTTTAT+AGG - chr8_1:38387521-38387540 Msa1192530:CDS 25.0%
!! TTGTCAATGTTCTTTTGAAT+AGG - chr8_1:38387628-38387647 Msa1192530:CDS 25.0%
!! TGTCAATGTTCTTTTGAATA+GGG - chr8_1:38387629-38387648 Msa1192530:CDS 25.0%
! TTTATGATCTCTTGAAATAC+TGG - chr8_1:38387685-38387704 Msa1192530:CDS 25.0%
! TGGAAACTTGTAATAACATT+TGG - chr8_1:38387705-38387724 Msa1192530:CDS 25.0%
! CATTAAATCTTTAATCCAGA+CGG + chr8_1:38387939-38387958 None:intergenic 25.0%
!!! AATCAAATTGCTTTGGAATT+AGG + chr8_1:38388086-38388105 None:intergenic 25.0%
! TATCAAATAGAGATATGACT+TGG - chr8_1:38388380-38388399 Msa1192530:intron 25.0%
! ATCAAATAGAGATATGACTT+GGG - chr8_1:38388381-38388400 Msa1192530:intron 25.0%
!!! CAATTCTTAGAATTTTGACT+TGG + chr8_1:38388471-38388490 None:intergenic 25.0%
! AGATAAATGTATACTTTCCA+AGG - chr8_1:38388496-38388515 Msa1192530:CDS 25.0%
!! AAAACATTTATCCTAGTCTT+GGG + chr8_1:38388543-38388562 None:intergenic 25.0%
!!! ATTTAAGAAAGTACCTCTTT+TGG + chr8_1:38388797-38388816 None:intergenic 25.0%
!! ATATTTTCTTTCAAACAGGA+AGG - chr8_1:38389033-38389052 Msa1192530:intron 25.0%
! ACAAAACATAAGCAATGTTA+AGG + chr8_1:38389255-38389274 None:intergenic 25.0%
! ATATTCACATACCAAGTTTA+CGG + chr8_1:38389405-38389424 None:intergenic 25.0%
! ATATACTTGCCAATTCATTA+TGG - chr8_1:38389460-38389479 Msa1192530:intron 25.0%
! TATACTTGCCAATTCATTAT+GGG - chr8_1:38389461-38389480 Msa1192530:intron 25.0%
! TGTGATTAACATTGTTCATT+TGG - chr8_1:38389861-38389880 Msa1192530:intron 25.0%
! TGGAAGATCATATACATTTA+TGG - chr8_1:38390066-38390085 Msa1192530:intron 25.0%
! TGCTAAAAAAATGAAAAAGG+AGG - chr8_1:38390194-38390213 Msa1192530:CDS 25.0%
!! TACTATTTGTTAACTTTCTG+AGG - chr8_1:38390391-38390410 Msa1192530:intron 25.0%
!! ACTATTTGTTAACTTTCTGA+GGG - chr8_1:38390392-38390411 Msa1192530:intron 25.0%
!!! TCTATCTATTTTTGTTTGCT+AGG - chr8_1:38390513-38390532 Msa1192530:intron 25.0%
!!! TATTTTTGTTTGCTAGGATA+TGG - chr8_1:38390519-38390538 Msa1192530:intron 25.0%
!!! ACAAATTTGTTTTTCACCAT+TGG - chr8_1:38390652-38390671 Msa1192530:intron 25.0%
! TTGAGAAAGGATAAAGATAA+TGG - chr8_1:38390904-38390923 Msa1192530:intron 25.0%
! TGAGAAAGGATAAAGATAAT+GGG - chr8_1:38390905-38390924 Msa1192530:intron 25.0%
! TCAAAGTAGAAACTTTATCT+TGG - chr8_1:38391159-38391178 Msa1192530:intron 25.0%
! ACAAAGCCCAATTAATTTAA+GGG + chr8_1:38391307-38391326 None:intergenic 25.0%
! AACAAAGCCCAATTAATTTA+AGG + chr8_1:38391308-38391327 None:intergenic 25.0%
! TTGTTGGTATACTATCTATT+TGG - chr8_1:38391417-38391436 Msa1192530:intron 25.0%
!!! TAAAGGTATGTACTTTTCAA+AGG + chr8_1:38391649-38391668 None:intergenic 25.0%
! GAATTATGAGATGAATTTGT+TGG - chr8_1:38391669-38391688 Msa1192530:intron 25.0%
! TTTATATAAGGCAATGATAC+AGG + chr8_1:38391702-38391721 None:intergenic 25.0%
!! TTATAGTTGTTATTACTCTC+TGG - chr8_1:38391760-38391779 Msa1192530:intron 25.0%
!!! TTCATTTTTGCAGAACAAAA+TGG - chr8_1:38391849-38391868 Msa1192530:intron 25.0%
!!! TCATTTTTGCAGAACAAAAT+GGG - chr8_1:38391850-38391869 Msa1192530:intron 25.0%
!! ACCATTCTATAACTTTTTAC+CGG - chr8_1:38392025-38392044 Msa1192530:intron 25.0%
! ATATTATTCAACGGTCAATT+CGG - chr8_1:38392231-38392250 Msa1192530:intron 25.0%
! TTCGGCAAAAATAAAAAAGT+TGG - chr8_1:38392249-38392268 Msa1192530:intron 25.0%
! ATAGTGTCCAAATATTACAT+TGG - chr8_1:38392286-38392305 Msa1192530:intron 25.0%
! TGGAAAATGATAGAAATAAG+AGG - chr8_1:38392585-38392604 Msa1192530:CDS 25.0%
! ACATTTCCAAACAAGAAAAA+TGG + chr8_1:38392755-38392774 None:intergenic 25.0%
!!! TTGTCAATTTTTAGTGGAAT+TGG - chr8_1:38393343-38393362 Msa1192530:CDS 25.0%
!!! CTTTTATTTTAATACCAAGG+CGG + chr8_1:38393390-38393409 None:intergenic 25.0%
!!! GAGCTTTTATTTTAATACCA+AGG + chr8_1:38393393-38393412 None:intergenic 25.0%
! AAAACATCAAAAGAAGAACA+TGG + chr8_1:38393760-38393779 None:intergenic 25.0%
! GTAGATATTTAGATGATTTC+AGG - chr8_1:38393912-38393931 Msa1192530:five_prime_UTR 25.0%
!! ATATTGGTCTTTAACCAAAG+AGG + chr8_1:38386618-38386637 None:intergenic 30.0%
! TAATCAAAGTCCTCAGTTTT+AGG + chr8_1:38387007-38387026 None:intergenic 30.0%
AAAGTACGAGGATTCTTTAT+TGG - chr8_1:38387355-38387374 Msa1192530:CDS 30.0%
ATAACTTTATCAACAAGACC+GGG + chr8_1:38387394-38387413 None:intergenic 30.0%
! GTCAATGTTCTTTTGAATAG+GGG - chr8_1:38387630-38387649 Msa1192530:CDS 30.0%
TTGTTAATGCTACAGACAAA+TGG - chr8_1:38387750-38387769 Msa1192530:CDS 30.0%
CCAAAAAGGCTACAAAAATT+GGG + chr8_1:38387888-38387907 None:intergenic 30.0%
! CCAATTTTTGTAGCCTTTTT+GGG - chr8_1:38387886-38387905 Msa1192530:CDS 30.0%
TGACATAACTCATACAGAAT+GGG + chr8_1:38388037-38388056 None:intergenic 30.0%
TAGGAGCAAAACAATACAAA+AGG + chr8_1:38388067-38388086 None:intergenic 30.0%
ATTTAAAAACCGCTTCTTCA+TGG + chr8_1:38388172-38388191 None:intergenic 30.0%
! ATTTGAAGTGTGGACTAATA+GGG + chr8_1:38388328-38388347 None:intergenic 30.0%
ATAACTCAACCCAACAAAAT+CGG + chr8_1:38388445-38388464 None:intergenic 30.0%
CAAAACATTTATCCTAGTCT+TGG + chr8_1:38388544-38388563 None:intergenic 30.0%
! TTTCAAAATCTGTCACTTCA+AGG - chr8_1:38388612-38388631 Msa1192530:intron 30.0%
CAAGGACTATACTATGTAAA+TGG - chr8_1:38388630-38388649 Msa1192530:intron 30.0%
AATTGCAAAGCAAGATCAAA+AGG + chr8_1:38388678-38388697 None:intergenic 30.0%
ATCTTGCTTTGCAATTATGT+AGG - chr8_1:38388682-38388701 Msa1192530:intron 30.0%
! CGAAAGCTTATTTGATGATA+AGG - chr8_1:38388742-38388761 Msa1192530:intron 30.0%
ATAATCAAACCATTCTTACC+AGG + chr8_1:38388836-38388855 None:intergenic 30.0%
CTATTGAATGCTATAAGTCT+TGG - chr8_1:38388890-38388909 Msa1192530:intron 30.0%
TCTAATAATTTACTACTCGC+TGG - chr8_1:38388914-38388933 Msa1192530:intron 30.0%
ATTTATCTGCAACTGTATGT+TGG - chr8_1:38388957-38388976 Msa1192530:intron 30.0%
AACAGTCAAATTACTTGTCT+AGG - chr8_1:38389129-38389148 Msa1192530:intron 30.0%
ACAGTCAAATTACTTGTCTA+GGG - chr8_1:38389130-38389149 Msa1192530:intron 30.0%
!!! TTATTTCCCCTTGTTTTCAT+TGG - chr8_1:38389173-38389192 Msa1192530:intron 30.0%
ACTGTTTACAAAATTCTCTC+AGG - chr8_1:38389291-38389310 Msa1192530:intron 30.0%
ATACTTGCCAATTCATTATG+GGG - chr8_1:38389462-38389481 Msa1192530:intron 30.0%
AAATACACCCCATAATGAAT+TGG + chr8_1:38389472-38389491 None:intergenic 30.0%
! CCAATACAACATATGTTTTC+AGG + chr8_1:38389528-38389547 None:intergenic 30.0%
CCTGAAAACATATGTTGTAT+TGG - chr8_1:38389525-38389544 Msa1192530:intron 30.0%
ATCAATAAATATTTCCCCCT+TGG + chr8_1:38389564-38389583 None:intergenic 30.0%
CTTGGCATACTTTATACATA+TGG - chr8_1:38390046-38390065 Msa1192530:intron 30.0%
! ATTGATTCATTGCTCATTTC+AGG - chr8_1:38390120-38390139 Msa1192530:CDS 30.0%
CAAATGTTATGTTCGAGAAA+AGG - chr8_1:38390236-38390255 Msa1192530:intron 30.0%
TATCTAACAGGTAAAGTTGA+GGG + chr8_1:38390343-38390362 None:intergenic 30.0%
TTATCTAACAGGTAAAGTTG+AGG + chr8_1:38390344-38390363 None:intergenic 30.0%
AGTTAACAAATAGTAGCACA+TGG + chr8_1:38390386-38390405 None:intergenic 30.0%
CCAACAAACTAAAGTAATTG+TGG + chr8_1:38390563-38390582 None:intergenic 30.0%
!! CCACAATTACTTTAGTTTGT+TGG - chr8_1:38390560-38390579 Msa1192530:intron 30.0%
TTAATGTACTTGTGCACATT+AGG + chr8_1:38390619-38390638 None:intergenic 30.0%
GTGAAAAACAAATTTGTGCA+CGG + chr8_1:38390649-38390668 None:intergenic 30.0%
!!! GATGAGATTTTTTGATCCAA+TGG + chr8_1:38390671-38390690 None:intergenic 30.0%
TGAGACTTATGATTCAAAGA+TGG - chr8_1:38390712-38390731 Msa1192530:intron 30.0%
AATATGGTGGCTAATCTTAA+GGG + chr8_1:38390787-38390806 None:intergenic 30.0%
AAATATGGTGGCTAATCTTA+AGG + chr8_1:38390788-38390807 None:intergenic 30.0%
! TTACAATTTGTTTCCTCCAA+GGG - chr8_1:38390817-38390836 Msa1192530:intron 30.0%
! TCTATATCCTAGCAGATTTT+TGG - chr8_1:38391046-38391065 Msa1192530:intron 30.0%
AAATACACCAAAAATCTGCT+AGG + chr8_1:38391056-38391075 None:intergenic 30.0%
TTGGTGTATTTGAATCAATC+AGG - chr8_1:38391065-38391084 Msa1192530:intron 30.0%
AGCATGACCCTTAAATTAAT+TGG - chr8_1:38391297-38391316 Msa1192530:intron 30.0%
GCATGACCCTTAAATTAATT+GGG - chr8_1:38391298-38391317 Msa1192530:intron 30.0%
AACTGTGAAACTGTAACATT+AGG - chr8_1:38391611-38391630 Msa1192530:CDS 30.0%
! TGAGTATGTGATGGAATATA+AGG - chr8_1:38391875-38391894 Msa1192530:intron 30.0%
! ATGTGATGGAATATAAGGTT+AGG - chr8_1:38391880-38391899 Msa1192530:intron 30.0%
TCCGGTAAAAAGTTATAGAA+TGG + chr8_1:38392029-38392048 None:intergenic 30.0%
GATAGTAAGTTTCAATCCAA+CGG + chr8_1:38392077-38392096 None:intergenic 30.0%
CATGGTACCAATGTAATATT+TGG + chr8_1:38392296-38392315 None:intergenic 30.0%
TACTAAAAAATGACTGGACA+TGG + chr8_1:38392314-38392333 None:intergenic 30.0%
TCTTTGATCCAAGAATAAGA+AGG + chr8_1:38392401-38392420 None:intergenic 30.0%
TTTGTTACGTCTATACATTG+TGG + chr8_1:38392690-38392709 None:intergenic 30.0%
!! AAACCTCCATTTTTCTTGTT+TGG - chr8_1:38392746-38392765 Msa1192530:intron 30.0%
TTTCCAAACAAGAAAAATGG+AGG + chr8_1:38392752-38392771 None:intergenic 30.0%
CAAACATAACATATGACTCT+TGG - chr8_1:38392777-38392796 Msa1192530:intron 30.0%
ATAACCTTCTATTCTGTTCA+AGG + chr8_1:38392867-38392886 None:intergenic 30.0%
AACTGTAACTATTGTGAAAC+TGG - chr8_1:38393007-38393026 Msa1192530:CDS 30.0%
!! TGGACTGGTAAATATAAACT+CGG - chr8_1:38393145-38393164 Msa1192530:intron 30.0%
!! ACTCTGTTGTCAATTTTTAG+TGG - chr8_1:38393337-38393356 Msa1192530:CDS 30.0%
!!! TCAATTTTTAGTGGAATTGG+TGG - chr8_1:38393346-38393365 Msa1192530:CDS 30.0%
TAAAATAAAAGCTCTCGTCT+CGG - chr8_1:38393399-38393418 Msa1192530:exon 30.0%
! AATCTGTTCGTATTTTGCAA+CGG - chr8_1:38393659-38393678 Msa1192530:intron 30.0%
GTTTCTCTAATGTTAACTGT+TGG - chr8_1:38393890-38393909 Msa1192530:five_prime_UTR 30.0%
GGAAAAGTGAAAGTGAAACA+GGG + chr8_1:38386462-38386481 None:intergenic 35.0%
AGGAAAAGTGAAAGTGAAAC+AGG + chr8_1:38386463-38386482 None:intergenic 35.0%
AGAAAAAGTGAGTGTGAGAA+GGG + chr8_1:38386566-38386585 None:intergenic 35.0%
AAGAAAAAGTGAGTGTGAGA+AGG + chr8_1:38386567-38386586 None:intergenic 35.0%
GTCTTTAACCAAAGAGGTTT+AGG + chr8_1:38386612-38386631 None:intergenic 35.0%
AGAGAGAGAGATTGAGAAAA+TGG - chr8_1:38386807-38386826 Msa1192530:CDS 35.0%
! AGGGTTTAACATGTGTTGAT+GGG - chr8_1:38386846-38386865 Msa1192530:CDS 35.0%
!! TCCTGTTTTTCCTAAAACTG+AGG - chr8_1:38386994-38387013 Msa1192530:CDS 35.0%
!!! TCCTCAGTTTTAGGAAAAAC+AGG + chr8_1:38386998-38387017 None:intergenic 35.0%
ACCTTATACTGCTCTTTCAA+GGG - chr8_1:38387036-38387055 Msa1192530:CDS 35.0%
ATGTGAGAAGTTCATGAAAC+TGG + chr8_1:38387192-38387211 None:intergenic 35.0%
TCTCTTCTTTCATAATCACC+AGG - chr8_1:38387306-38387325 Msa1192530:CDS 35.0%
ACGAGGATTCTTTATTGGAA+TGG - chr8_1:38387360-38387379 Msa1192530:CDS 35.0%
CGAGGATTCTTTATTGGAAT+GGG - chr8_1:38387361-38387380 Msa1192530:CDS 35.0%
ATACTTCACTTTGCCAATTG+TGG - chr8_1:38387494-38387513 Msa1192530:CDS 35.0%
CAAAACCACATTACCACAAT+TGG + chr8_1:38387510-38387529 None:intergenic 35.0%
AGAGATTCTCTTGAGATGTT+CGG - chr8_1:38387568-38387587 Msa1192530:CDS 35.0%
!! GAGCATTGGGAAAGAAATTT+GGG + chr8_1:38387830-38387849 None:intergenic 35.0%
!! TGAGCATTGGGAAAGAAATT+TGG + chr8_1:38387831-38387850 None:intergenic 35.0%
! ACCTCTTTTGAATGAGCATT+GGG + chr8_1:38387843-38387862 None:intergenic 35.0%
! TACCTCTTTTGAATGAGCAT+TGG + chr8_1:38387844-38387863 None:intergenic 35.0%
! CCCAATTTTTGTAGCCTTTT+TGG - chr8_1:38387885-38387904 Msa1192530:CDS 35.0%
CCCAAAAAGGCTACAAAAAT+TGG + chr8_1:38387889-38387908 None:intergenic 35.0%
GCAATAATTTCTGCCCAAAA+AGG + chr8_1:38387902-38387921 None:intergenic 35.0%
GTGACATAACTCATACAGAA+TGG + chr8_1:38388038-38388057 None:intergenic 35.0%
ACTTGTGCAAACACATATTG+TGG - chr8_1:38388136-38388155 Msa1192530:intron 35.0%
CTTGTGCAAACACATATTGT+GGG - chr8_1:38388137-38388156 Msa1192530:intron 35.0%
! CATTTGAAGTGTGGACTAAT+AGG + chr8_1:38388329-38388348 None:intergenic 35.0%
!! TCCTTATAAGCCGATTTTGT+TGG - chr8_1:38388432-38388451 Msa1192530:intron 35.0%
!! CCTTATAAGCCGATTTTGTT+GGG - chr8_1:38388433-38388452 Msa1192530:intron 35.0%
TGATTGATCATGGAAACTTC+TGG + chr8_1:38388773-38388792 None:intergenic 35.0%
!! CTCTTTTGGTTGATTGATCA+TGG + chr8_1:38388783-38388802 None:intergenic 35.0%
CATGATCAATCAACCAAAAG+AGG - chr8_1:38388781-38388800 Msa1192530:intron 35.0%
ATACAGTTGCAGATAAATGC+AGG + chr8_1:38388955-38388974 None:intergenic 35.0%
! AGGCTAAAAGACACACTTTT+TGG - chr8_1:38389053-38389072 Msa1192530:intron 35.0%
TCAATGCCAATGAAAACAAG+GGG + chr8_1:38389182-38389201 None:intergenic 35.0%
CTCAATGCCAATGAAAACAA+GGG + chr8_1:38389183-38389202 None:intergenic 35.0%
TCTCAATGCCAATGAAAACA+AGG + chr8_1:38389184-38389203 None:intergenic 35.0%
CATAAGCAATGTTAAGGAGA+CGG + chr8_1:38389249-38389268 None:intergenic 35.0%
GTTTACAAAATTCTCTCAGG+AGG - chr8_1:38389294-38389313 Msa1192530:intron 35.0%
GGAGAAATTCATCATCAGTA+AGG + chr8_1:38389359-38389378 None:intergenic 35.0%
GAATTTGCAATCCGTAAACT+TGG - chr8_1:38389391-38389410 Msa1192530:intron 35.0%
! ATCATAAAAAGCAGAAGTGC+AGG + chr8_1:38389436-38389455 None:intergenic 35.0%
!! TTGGTCTTTTTGTCTAACCA+AGG - chr8_1:38389544-38389563 Msa1192530:intron 35.0%
! TGGTCTTTTTGTCTAACCAA+GGG - chr8_1:38389545-38389564 Msa1192530:intron 35.0%
! ATTGATTCAAGTGGCACTAA+TGG - chr8_1:38389578-38389597 Msa1192530:intron 35.0%
! CATTTTACAAACTATGCCTG+AGG - chr8_1:38389602-38389621 Msa1192530:intron 35.0%
AAATTCCTACATCACACTTG+AGG + chr8_1:38389685-38389704 None:intergenic 35.0%
! AATCGAAGTGTCTTTGAACA+TGG - chr8_1:38389791-38389810 Msa1192530:intron 35.0%
! ATCGAAGTGTCTTTGAACAT+GGG - chr8_1:38389792-38389811 Msa1192530:intron 35.0%
ATGTTATGTTCGAGAAAAGG+AGG - chr8_1:38390239-38390258 Msa1192530:intron 35.0%
ATCTTAGGAAAAGCAAGTAG+AGG + chr8_1:38390432-38390451 None:intergenic 35.0%
TCACTTGTGCATCATAGAAT+TGG - chr8_1:38390761-38390780 Msa1192530:intron 35.0%
! GTTACAATTTGTTTCCTCCA+AGG - chr8_1:38390816-38390835 Msa1192530:intron 35.0%
AGTAGTGACTCTATTGTGAA+CGG + chr8_1:38390957-38390976 None:intergenic 35.0%
AAATGCTAACAAATGCCCTT+AGG - chr8_1:38391120-38391139 Msa1192530:intron 35.0%
AATGCTAACAAATGCCCTTA+GGG - chr8_1:38391121-38391140 Msa1192530:intron 35.0%
CTTCTTAACAAATGCCCTAA+GGG + chr8_1:38391138-38391157 None:intergenic 35.0%
! TGCATCTAATTTTTCTACCC+TGG - chr8_1:38391454-38391473 Msa1192530:intron 35.0%
! GCATCTAATTTTTCTACCCT+GGG - chr8_1:38391455-38391474 Msa1192530:intron 35.0%
ATTAGCAATGAGCAACTCTT+TGG - chr8_1:38391485-38391504 Msa1192530:intron 35.0%
!! TGAGCAACTCTTTGGAATTA+TGG - chr8_1:38391493-38391512 Msa1192530:intron 35.0%
AACGCTTCAGTTGTTTGAAA+TGG - chr8_1:38391520-38391539 Msa1192530:intron 35.0%
! ACGCTTCAGTTGTTTGAAAT+GGG - chr8_1:38391521-38391540 Msa1192530:intron 35.0%
!! TCCTCAGCAGTTGATAAATT+AGG - chr8_1:38391563-38391582 Msa1192530:intron 35.0%
ACCTAATTTATCAACTGCTG+AGG + chr8_1:38391567-38391586 None:intergenic 35.0%
!! CTATTAATTGGCTGTTTTGC+AGG - chr8_1:38391795-38391814 Msa1192530:intron 35.0%
!! AAGTTTGCAAGCTCTGAAAT+TGG + chr8_1:38391831-38391850 None:intergenic 35.0%
AAATGGGATTGAGTATGTGA+TGG - chr8_1:38391866-38391885 Msa1192530:intron 35.0%
TAGATACAAACACACATGCA+TGG + chr8_1:38391936-38391955 None:intergenic 35.0%
GAAGAACAAAGCGATATGTA+TGG - chr8_1:38392419-38392438 Msa1192530:intron 35.0%
! CTATCATTTTCCATAAAGCC+TGG + chr8_1:38392578-38392597 None:intergenic 35.0%
!! ACTCTAGTCTTGATCCTTAT+TGG - chr8_1:38392636-38392655 Msa1192530:intron 35.0%
!! CTCTAGTCTTGATCCTTATT+GGG - chr8_1:38392637-38392656 Msa1192530:intron 35.0%
TGAACCTGAATTTGTGAACA+CGG - chr8_1:38392829-38392848 Msa1192530:intron 35.0%
!! TGTGAACACGGAGTTATTTT+CGG - chr8_1:38392841-38392860 Msa1192530:intron 35.0%
AACTTCTTTCTTGAATCCCA+AGG + chr8_1:38392986-38393005 None:intergenic 35.0%
TGTAACTATTGTGAAACTGG+TGG - chr8_1:38393010-38393029 Msa1192530:CDS 35.0%
AACAGCAGAAAGACATTCTT+CGG - chr8_1:38393098-38393117 Msa1192530:intron 35.0%
TAAGATAAGCTCCAAGTGTT+CGG + chr8_1:38393182-38393201 None:intergenic 35.0%
GATATCCTAATGTATCTGTC+TGG + chr8_1:38393279-38393298 None:intergenic 35.0%
! AAGAATTTTCCTCTTCGTTG+CGG + chr8_1:38393434-38393453 None:intergenic 35.0%
AGAGGAAAATTCTTGAGAAG+TGG - chr8_1:38393440-38393459 Msa1192530:intron 35.0%
!!! TAATTTTGGTGTTTTCGACC+TGG - chr8_1:38393549-38393568 Msa1192530:intron 35.0%
ATGGATTCTGATAAATGACC+AGG + chr8_1:38393570-38393589 None:intergenic 35.0%
! ATCTGTTCGTATTTTGCAAC+GGG - chr8_1:38393660-38393679 Msa1192530:intron 35.0%
CGTCTTGAAGTAACTTATGT+CGG - chr8_1:38393711-38393730 Msa1192530:intron 35.0%
!!! TATGTGACTTTTTCAGTGCA+AGG - chr8_1:38393808-38393827 Msa1192530:intron 35.0%
CATTAGAGAAACACAGAGAT+GGG + chr8_1:38393882-38393901 None:intergenic 35.0%
ACATTAGAGAAACACAGAGA+TGG + chr8_1:38393883-38393902 None:intergenic 35.0%
AGTGAAAGTGAAACAGGGTT+CGG + chr8_1:38386457-38386476 None:intergenic 40.0%
!! CACTTTCACTTTTCCTCTTC+TGG - chr8_1:38386467-38386486 Msa1192530:three_prime_UTR 40.0%
TGCATGAACCTAAACCTCTT+TGG - chr8_1:38386601-38386620 Msa1192530:three_prime_UTR 40.0%
GAGAGATTGAGAAAATGGCT+AGG - chr8_1:38386812-38386831 Msa1192530:CDS 40.0%
AAAATGGCTAGGTCATGTTG+TGG - chr8_1:38386823-38386842 Msa1192530:CDS 40.0%
GAGGGTTTAACATGTGTTGA+TGG - chr8_1:38386845-38386864 Msa1192530:CDS 40.0%
! GTTGATGGGATTCTCTTTCT+AGG - chr8_1:38386860-38386879 Msa1192530:CDS 40.0%
ATGTATACAGGTGAAATGGC+AGG - chr8_1:38386944-38386963 Msa1192530:CDS 40.0%
GAAATGGCAGGTACTTCAAA+TGG - chr8_1:38386956-38386975 Msa1192530:CDS 40.0%
CACCTTATACTGCTCTTTCA+AGG - chr8_1:38387035-38387054 Msa1192530:CDS 40.0%
TCCCTTGAAAGAGCAGTATA+AGG + chr8_1:38387040-38387059 None:intergenic 40.0%
! TGCTCTTTCAAGGGATTTTC+TGG - chr8_1:38387045-38387064 Msa1192530:CDS 40.0%
GAGAAGTTCATGAAACTGGT+GGG + chr8_1:38387188-38387207 None:intergenic 40.0%
TGAGAAGTTCATGAAACTGG+TGG + chr8_1:38387189-38387208 None:intergenic 40.0%
!! TTAGTCTTATGCCAAGTGCA+TGG - chr8_1:38387450-38387469 Msa1192530:CDS 40.0%
TATCAATTGTGCCATGCACT+TGG + chr8_1:38387464-38387483 None:intergenic 40.0%
AAGTGCATGGCACAATTGAT+AGG - chr8_1:38387463-38387482 Msa1192530:CDS 40.0%
! CTTTGCCAATTGTGGTAATG+TGG - chr8_1:38387502-38387521 Msa1192530:CDS 40.0%
TCCCAATGCTCATTCAAAAG+AGG - chr8_1:38387839-38387858 Msa1192530:CDS 40.0%
AGGCTACAAAAATTGGGTGT+GGG + chr8_1:38387882-38387901 None:intergenic 40.0%
AAGGCTACAAAAATTGGGTG+TGG + chr8_1:38387883-38387902 None:intergenic 40.0%
AACTCATACAGAATGGGAGA+GGG + chr8_1:38388031-38388050 None:intergenic 40.0%
TAACTCATACAGAATGGGAG+AGG + chr8_1:38388032-38388051 None:intergenic 40.0%
AATTCCTAGCCATGAAGAAG+CGG - chr8_1:38388160-38388179 Msa1192530:intron 40.0%
TAGTCCACACTTCAAATGTC+CGG - chr8_1:38388331-38388350 Msa1192530:intron 40.0%
! CAAAATCGGCTTATAAGGAG+AGG + chr8_1:38388431-38388450 None:intergenic 40.0%
! CCCAACAAAATCGGCTTATA+AGG + chr8_1:38388436-38388455 None:intergenic 40.0%
ATTCATTTAGTGCATCGTCC+TGG - chr8_1:38388815-38388834 Msa1192530:CDS 40.0%
! ACTGATGATGAATTTCTCCG+TGG - chr8_1:38389360-38389379 Msa1192530:intron 40.0%
TGCAAATTCAACTTCCTCCA+CGG + chr8_1:38389380-38389399 None:intergenic 40.0%
! GGTCTTTTTGTCTAACCAAG+GGG - chr8_1:38389546-38389565 Msa1192530:intron 40.0%
! GTCTTTTTGTCTAACCAAGG+GGG - chr8_1:38389547-38389566 Msa1192530:intron 40.0%
ATGTGTTTGCTTTGCATGCT+TGG - chr8_1:38389712-38389731 Msa1192530:intron 40.0%
!! TTGGACTTGCTACTAATAGC+AGG - chr8_1:38389731-38389750 Msa1192530:intron 40.0%
! TCGAAGTGTCTTTGAACATG+GGG - chr8_1:38389793-38389812 Msa1192530:intron 40.0%
! TTGGTGGTAGTTGTTATCGA+TGG - chr8_1:38389985-38390004 Msa1192530:intron 40.0%
AACAAAACCTCTTCAACCCT+TGG + chr8_1:38390836-38390855 None:intergenic 40.0%
!!! AGGGTTGAAGAGGTTTTGTT+AGG - chr8_1:38390836-38390855 Msa1192530:intron 40.0%
GAGATGAATATCTCCTCCAT+GGG - chr8_1:38390927-38390946 Msa1192530:intron 40.0%
GTAGTGACTCTATTGTGAAC+GGG + chr8_1:38390956-38390975 None:intergenic 40.0%
AATAAGGGGGTTGTGTTTGA+GGG + chr8_1:38391013-38391032 None:intergenic 40.0%
AAATAAGGGGGTTGTGTTTG+AGG + chr8_1:38391014-38391033 None:intergenic 40.0%
GCTTCTTAACAAATGCCCTA+AGG + chr8_1:38391139-38391158 None:intergenic 40.0%
TCATGCTAAAAGAGCCCTTA+GGG + chr8_1:38391284-38391303 None:intergenic 40.0%
ATTGCTAATCTGTGATCCCA+GGG + chr8_1:38391474-38391493 None:intergenic 40.0%
!! AGCTCTGAAATTGGAACATC+TGG + chr8_1:38391822-38391841 None:intergenic 40.0%
AAATCAAATCACACCGTCAC+AGG - chr8_1:38391980-38391999 Msa1192530:intron 40.0%
CAAGAATAAGAAGGACCAGA+GGG + chr8_1:38392392-38392411 None:intergenic 40.0%
!!! AAAGCCTGGTTTTACGTCAT+CGG + chr8_1:38392564-38392583 None:intergenic 40.0%
TGACGTAAAACCAGGCTTTA+TGG - chr8_1:38392565-38392584 Msa1192530:CDS 40.0%
! TAGTCTTGATCCTTATTGGG+TGG - chr8_1:38392640-38392659 Msa1192530:intron 40.0%
TCCTTATTGGGTGGAAGAAA+TGG - chr8_1:38392649-38392668 Msa1192530:intron 40.0%
ACCATTTCTTCCACCCAATA+AGG + chr8_1:38392653-38392672 None:intergenic 40.0%
AACTCCGTGTTCACAAATTC+AGG + chr8_1:38392836-38392855 None:intergenic 40.0%
ACAATCTTCCAACAGAAAGC+AGG - chr8_1:38392891-38392910 Msa1192530:intron 40.0%
ATTGCATCCTCGATAGTCAT+AGG + chr8_1:38392938-38392957 None:intergenic 40.0%
TTCTTTCTTGAATCCCAAGG+CGG + chr8_1:38392983-38393002 None:intergenic 40.0%
ACTCAACTCTGTGATAGACT+AGG - chr8_1:38393037-38393056 Msa1192530:intron 40.0%
AACTCTGTGATAGACTAGGA+AGG - chr8_1:38393041-38393060 Msa1192530:intron 40.0%
ACTCTGTGATAGACTAGGAA+GGG - chr8_1:38393042-38393061 Msa1192530:intron 40.0%
TCCACACAAGATTCAAACCA+CGG + chr8_1:38393129-38393148 None:intergenic 40.0%
AAGATAAGCTCCAAGTGTTC+GGG + chr8_1:38393181-38393200 None:intergenic 40.0%
GAACACTTGGAGCTTATCTT+AGG - chr8_1:38393181-38393200 Msa1192530:intron 40.0%
CAGTACGAGTGTGATTCAAA+GGG + chr8_1:38393210-38393229 None:intergenic 40.0%
TCAGTACGAGTGTGATTCAA+AGG + chr8_1:38393211-38393230 None:intergenic 40.0%
AGCTTCCAGACAGATACATT+AGG - chr8_1:38393271-38393290 Msa1192530:intron 40.0%
GGAAAATTCTTGAGAAGTGG+TGG - chr8_1:38393443-38393462 Msa1192530:intron 40.0%
TTCAATCTGAACCAAAGTCC+CGG + chr8_1:38393485-38393504 None:intergenic 40.0%
ACTTGATGAGGTCTGACAAT+TGG + chr8_1:38393601-38393620 None:intergenic 40.0%
ATTGTCAGACCTCATCAAGT+TGG - chr8_1:38393601-38393620 Msa1192530:intron 40.0%
GCAGGTACTTCAAATGGAAG+AGG - chr8_1:38386962-38386981 Msa1192530:CDS 45.0%
GGTACTTCAAATGGAAGAGG+AGG - chr8_1:38386965-38386984 Msa1192530:CDS 45.0%
ATGAACTTGCAGCAGTTTCC+TGG + chr8_1:38387327-38387346 None:intergenic 45.0%
GAAACTGCTGCAAGTTCATC+CGG - chr8_1:38387328-38387347 Msa1192530:CDS 45.0%
GAATCCTCGTACTTTGCTTC+CGG + chr8_1:38387350-38387369 None:intergenic 45.0%
ATTGGAATGGGATTCTTGCC+CGG - chr8_1:38387373-38387392 Msa1192530:CDS 45.0%
TGGTGACTCATCAGATTCTC+TGG - chr8_1:38387770-38387789 Msa1192530:CDS 45.0%
GACTCATCAGATTCTCTGGA+AGG - chr8_1:38387774-38387793 Msa1192530:CDS 45.0%
AAAACCGCTTCTTCATGGCT+AGG + chr8_1:38388167-38388186 None:intergenic 45.0%
CTACTGTGGGTGAAGTAACA+AGG + chr8_1:38388248-38388267 None:intergenic 45.0%
! TTGAGTGTTCTGGACGTGAA+GGG - chr8_1:38388290-38388309 Msa1192530:intron 45.0%
! ACAACCGGACATTTGAAGTG+TGG + chr8_1:38388338-38388357 None:intergenic 45.0%
AACACTCTCACACTCACAAC+CGG + chr8_1:38388353-38388372 None:intergenic 45.0%
GATGATGAATTTCTCCGTGG+AGG - chr8_1:38389363-38389382 Msa1192530:intron 45.0%
! TGCTGAGTTCTAATCTCCTC+AGG + chr8_1:38389621-38389640 None:intergenic 45.0%
GATTAGAACTCAGCACCTTG+AGG - chr8_1:38389626-38389645 Msa1192530:intron 45.0%
AGCTTAGCGTTGTAACCTCA+AGG + chr8_1:38389644-38389663 None:intergenic 45.0%
TAGCACCTCAAGTGTGATGT+AGG - chr8_1:38389677-38389696 Msa1192530:intron 45.0%
CTTACCTCACTAGGTGGAAT+CGG + chr8_1:38389963-38389982 None:intergenic 45.0%
AAGATGAAGTCTACCAGCTC+AGG + chr8_1:38390162-38390181 None:intergenic 45.0%
AAAACCTCTTCAACCCTTGG+AGG + chr8_1:38390833-38390852 None:intergenic 45.0%
GGAGATGAATATCTCCTCCA+TGG - chr8_1:38390926-38390945 Msa1192530:intron 45.0%
TATTGTGAACGGGAAACCCA+TGG + chr8_1:38390946-38390965 None:intergenic 45.0%
AAAAGAGCCCTTAGGGCTAA+GGG + chr8_1:38391277-38391296 None:intergenic 45.0%
TAAAAGAGCCCTTAGGGCTA+AGG + chr8_1:38391278-38391297 None:intergenic 45.0%
GTCATGCTAAAAGAGCCCTT+AGG + chr8_1:38391285-38391304 None:intergenic 45.0%
CATTGCTAATCTGTGATCCC+AGG + chr8_1:38391475-38391494 None:intergenic 45.0%
ACCGTCACAGGTGTAATTCT+TGG - chr8_1:38391992-38392011 Msa1192530:intron 45.0%
CCCAAGAATTACACCTGTGA+CGG + chr8_1:38391996-38392015 None:intergenic 45.0%
CCGTCACAGGTGTAATTCTT+GGG - chr8_1:38391993-38392012 Msa1192530:intron 45.0%
TTGTTTCCCTAGTATCCCTC+TGG - chr8_1:38392374-38392393 Msa1192530:intron 45.0%
CCAAGAATAAGAAGGACCAG+AGG + chr8_1:38392393-38392412 None:intergenic 45.0%
CCTCTGGTCCTTCTTATTCT+TGG - chr8_1:38392390-38392409 Msa1192530:intron 45.0%
CGATATGTATGGTACAGCAG+AGG - chr8_1:38392430-38392449 Msa1192530:intron 45.0%
TACAGCAGAGGTCAAAGTTG+AGG - chr8_1:38392442-38392461 Msa1192530:intron 45.0%
AGTCAAGGCAGGTCAACTTA+GGG - chr8_1:38392486-38392505 Msa1192530:intron 45.0%
!!! AAGCCTGGTTTTACGTCATC+GGG + chr8_1:38392563-38392582 None:intergenic 45.0%
GTAACAAATCAACTCCCTCC+AGG - chr8_1:38392702-38392721 Msa1192530:intron 45.0%
ACACTACTTAGAGACCTGGA+GGG + chr8_1:38392719-38392738 None:intergenic 45.0%
AACACTACTTAGAGACCTGG+AGG + chr8_1:38392720-38392739 None:intergenic 45.0%
TGCAACACTACTTAGAGACC+TGG + chr8_1:38392723-38392742 None:intergenic 45.0%
TCGGCCTTGAACAGAATAGA+AGG - chr8_1:38392860-38392879 Msa1192530:intron 45.0%
ATGTGGAACCTGCTTTCTGT+TGG + chr8_1:38392902-38392921 None:intergenic 45.0%
!! TAGGTGGCTTTGGAAGAATG+TGG + chr8_1:38392919-38392938 None:intergenic 45.0%
TCGATAGTCATAGGTGGCTT+TGG + chr8_1:38392929-38392948 None:intergenic 45.0%
AAAGCCACCTATGACTATCG+AGG - chr8_1:38392928-38392947 Msa1192530:intron 45.0%
CAATTCCCCGGACAAAGAAA+TGG - chr8_1:38392954-38392973 Msa1192530:CDS 45.0%
GGTTTGAATCTTGTGTGGAC+TGG - chr8_1:38393130-38393149 Msa1192530:intron 45.0%
TCCAATAGAACCCGAACACT+TGG - chr8_1:38393168-38393187 Msa1192530:intron 45.0%
! TCCAAGTGTTCGGGTTCTAT+TGG + chr8_1:38393172-38393191 None:intergenic 45.0%
!! TTGAAGCCCATTTTTCCTGC+TGG - chr8_1:38393310-38393329 Msa1192530:CDS 45.0%
GTCACTCCAGCAGGAAAAAT+GGG + chr8_1:38393319-38393338 None:intergenic 45.0%
AGTCACTCCAGCAGGAAAAA+TGG + chr8_1:38393320-38393339 None:intergenic 45.0%
!! TTTATACTATATTTAAATTA+AGG - chr8_1:38391096-38391115 Msa1192530:intron 5.0%
!! TTATACTATATTTAAATTAA+GGG - chr8_1:38391097-38391116 Msa1192530:intron 5.0%
GTGAGTGGGGAATACCTGAT+CGG + chr8_1:38386531-38386550 None:intergenic 50.0%
ATCAGGTATTCCCCACTCAC+CGG - chr8_1:38386531-38386550 Msa1192530:three_prime_UTR 50.0%
GTGAGTGTGAGAAGGGAAAG+TGG + chr8_1:38386559-38386578 None:intergenic 50.0%
ATGGCTAGGTCATGTTGTGG+AGG - chr8_1:38386826-38386845 Msa1192530:CDS 50.0%
TGGCTAGGTCATGTTGTGGA+GGG - chr8_1:38386827-38386846 Msa1192530:CDS 50.0%
TCATCCGGAAGCAAAGTACG+AGG - chr8_1:38387343-38387362 Msa1192530:CDS 50.0%
CTTCTGTTTACTCGACCGTC+TGG - chr8_1:38387921-38387940 Msa1192530:CDS 50.0%
CATACAGAATGGGAGAGGGA+AGG + chr8_1:38388027-38388046 None:intergenic 50.0%
! TCTGACGTGTGGACTACTGT+GGG + chr8_1:38388261-38388280 None:intergenic 50.0%
! ATCTGACGTGTGGACTACTG+TGG + chr8_1:38388262-38388281 None:intergenic 50.0%
! GTTGAGTGTTCTGGACGTGA+AGG - chr8_1:38388289-38388308 Msa1192530:intron 50.0%
! TGAGTGTTCTGGACGTGAAG+GGG - chr8_1:38388291-38388310 Msa1192530:intron 50.0%
! TGACTTGGGTTGTGTTCGCA+AGG - chr8_1:38388395-38388414 Msa1192530:intron 50.0%
! CCTGACACAATGAAGCACCT+TGG + chr8_1:38388516-38388535 None:intergenic 50.0%
! CCAAGGTGCTTCATTGTGTC+AGG - chr8_1:38388513-38388532 Msa1192530:CDS 50.0%
TGTCAGGAACTCCCAAGACT+AGG - chr8_1:38388529-38388548 Msa1192530:CDS 50.0%
GTGCATCGTCCTGGTAAGAA+TGG - chr8_1:38388824-38388843 Msa1192530:CDS 50.0%
ACTAGGTGGAATCGGCTACA+TGG + chr8_1:38389955-38389974 None:intergenic 50.0%
CGATTCCACCTAGTGAGGTA+AGG - chr8_1:38389961-38389980 Msa1192530:intron 50.0%
AAGTCTACCAGCTCAGGAAC+TGG + chr8_1:38390156-38390175 None:intergenic 50.0%
GTTTCCTCCAAGGGTTGAAG+AGG - chr8_1:38390826-38390845 Msa1192530:intron 50.0%
!! GGGCTAAGGGCACTTGTTAA+AGG + chr8_1:38391264-38391283 None:intergenic 50.0%
AACAAGTGCCCTTAGCCCTA+AGG - chr8_1:38391266-38391285 Msa1192530:intron 50.0%
ACAAGTGCCCTTAGCCCTAA+GGG - chr8_1:38391267-38391286 Msa1192530:intron 50.0%
GAAGGACCAGAGGGATACTA+GGG + chr8_1:38392383-38392402 None:intergenic 50.0%
AGAAGGACCAGAGGGATACT+AGG + chr8_1:38392384-38392403 None:intergenic 50.0%
GCCATGAACCTTCACAGTCA+AGG - chr8_1:38392471-38392490 Msa1192530:intron 50.0%
GCCTTGACTGTGAAGGTTCA+TGG + chr8_1:38392475-38392494 None:intergenic 50.0%
TGAACCTTCACAGTCAAGGC+AGG - chr8_1:38392475-38392494 Msa1192530:intron 50.0%
TTGACCTGCCTTGACTGTGA+AGG + chr8_1:38392482-38392501 None:intergenic 50.0%
CAGTCAAGGCAGGTCAACTT+AGG - chr8_1:38392485-38392504 Msa1192530:intron 50.0%
GTCAAGGCAGGTCAACTTAG+GGG - chr8_1:38392487-38392506 Msa1192530:intron 50.0%
CAGGTCAACTTAGGGGAAAC+TGG - chr8_1:38392494-38392513 Msa1192530:intron 50.0%
AACTTAGGGGAAACTGGCAC+TGG - chr8_1:38392500-38392519 Msa1192530:intron 50.0%
TTCCCCGATGACGTAAAACC+AGG - chr8_1:38392557-38392576 Msa1192530:CDS 50.0%
!!! AGCCTGGTTTTACGTCATCG+GGG + chr8_1:38392562-38392581 None:intergenic 50.0%
GCATCCTCGATAGTCATAGG+TGG + chr8_1:38392935-38392954 None:intergenic 50.0%
CTATCGAGGATGCAATTCCC+CGG - chr8_1:38392942-38392961 Msa1192530:intron 50.0%
TTCCCCGGACAAAGAAATGG+TGG - chr8_1:38392957-38392976 Msa1192530:CDS 50.0%
AAAGAAATGGTGGCCGCCTT+GGG - chr8_1:38392967-38392986 Msa1192530:CDS 50.0%
TGTGAGTATTCCCCCAGAGT+CGG + chr8_1:38393074-38393093 None:intergenic 50.0%
GACATTCTTCGGTATTGCCG+TGG - chr8_1:38393109-38393128 Msa1192530:intron 50.0%
GCCGTGGTTTGAATCTTGTG+TGG - chr8_1:38393125-38393144 Msa1192530:intron 50.0%
TTCTGGACAAACCGGGACTT+TGG - chr8_1:38393471-38393490 Msa1192530:intron 50.0%
CTGACAATTGGCTGAGAGCA+TGG + chr8_1:38393589-38393608 None:intergenic 50.0%
!! GTCAGACCTCATCAAGTTGG+AGG - chr8_1:38393604-38393623 Msa1192530:intron 50.0%
GAGAGACCTCCAACTTGATG+AGG + chr8_1:38393613-38393632 None:intergenic 50.0%
TAAGAGCTCTGTGCGAAAGG+AGG - chr8_1:38393683-38393702 Msa1192530:intron 50.0%
!! AAACAGGGTTCGGTGCGTCT+AGG + chr8_1:38386447-38386466 None:intergenic 55.0%
GGGAATACCTGATCGGAGAG+GGG + chr8_1:38386524-38386543 None:intergenic 55.0%
GGGGAATACCTGATCGGAGA+GGG + chr8_1:38386525-38386544 None:intergenic 55.0%
TGGGGAATACCTGATCGGAG+AGG + chr8_1:38386526-38386545 None:intergenic 55.0%
GTGAGAAGGGAAAGTGGCAC+CGG + chr8_1:38386553-38386572 None:intergenic 55.0%
CAGAATGGGAGAGGGAAGGA+TGG + chr8_1:38388023-38388042 None:intergenic 55.0%
ATGTCCGCGGTTGAGTGTTC+TGG - chr8_1:38388280-38388299 Msa1192530:intron 55.0%
ACGTCCAGAACACTCAACCG+CGG + chr8_1:38388287-38388306 None:intergenic 55.0%
! CACTTGAGGTGCTAGCTCAG+TGG + chr8_1:38389671-38389690 None:intergenic 55.0%
! GTAGCCGATTCCACCTAGTG+AGG - chr8_1:38389956-38389975 Msa1192530:intron 55.0%
CCAAGCCTTACCTCACTAGG+TGG + chr8_1:38389969-38389988 None:intergenic 55.0%
CCACCTAGTGAGGTAAGGCT+TGG - chr8_1:38389966-38389985 Msa1192530:intron 55.0%
CCACCAAGCCTTACCTCACT+AGG + chr8_1:38389972-38389991 None:intergenic 55.0%
CCTAGTGAGGTAAGGCTTGG+TGG - chr8_1:38389969-38389988 Msa1192530:intron 55.0%
! TAAAGCGCCAGTTCCTGAGC+TGG - chr8_1:38390146-38390165 Msa1192530:CDS 55.0%
TGTGAACGGGAAACCCATGG+AGG + chr8_1:38390943-38390962 None:intergenic 55.0%
!! GGAAACTGGCACTGGCGAAA+GGG - chr8_1:38392508-38392527 Msa1192530:intron 55.0%
GGCCACCATTTCTTTGTCCG+GGG + chr8_1:38392962-38392981 None:intergenic 55.0%
CGGCCACCATTTCTTTGTCC+GGG + chr8_1:38392963-38392982 None:intergenic 55.0%
GCGGCCACCATTTCTTTGTC+CGG + chr8_1:38392964-38392983 None:intergenic 55.0%
CAAAGAAATGGTGGCCGCCT+TGG - chr8_1:38392966-38392985 Msa1192530:CDS 55.0%
GACAACAGAGTCACTCCAGC+AGG + chr8_1:38393328-38393347 None:intergenic 55.0%
GAAGTTGCACTTCACCGCCT+TGG - chr8_1:38393373-38393392 Msa1192530:CDS 55.0%
TCGAGACTTCCGCAACGAAG+AGG - chr8_1:38393422-38393441 Msa1192530:intron 55.0%
!! TGGCGCAGTTCTGGACAAAC+CGG - chr8_1:38393463-38393482 Msa1192530:intron 55.0%
GGGTAAGAGCTCTGTGCGAA+AGG - chr8_1:38393680-38393699 Msa1192530:intron 55.0%
!! TCCTCTTCTGGAGCGAGTGC+AGG - chr8_1:38386479-38386498 Msa1192530:three_prime_UTR 60.0%
ACCTGATCGGAGAGGGGAGA+GGG + chr8_1:38386518-38386537 None:intergenic 60.0%
TACCTGATCGGAGAGGGGAG+AGG + chr8_1:38386519-38386538 None:intergenic 60.0%
!! GAAAGTGGCACCGGTGAGTG+GGG + chr8_1:38386544-38386563 None:intergenic 60.0%
!! GGAAAGTGGCACCGGTGAGT+GGG + chr8_1:38386545-38386564 None:intergenic 60.0%
GTCCACACGTCAGATGTCCG+CGG - chr8_1:38388267-38388286 Msa1192530:intron 60.0%
AACCGCGGACATCTGACGTG+TGG + chr8_1:38388272-38388291 None:intergenic 60.0%
!! GGGAAACTGGCACTGGCGAA+AGG - chr8_1:38392507-38392526 Msa1192530:intron 60.0%
!! TGGCACTGGCGAAAGGGTGA+AGG - chr8_1:38392514-38392533 Msa1192530:CDS 60.0%
!! GAAGGGCTCTTGCCGACTCT+GGG - chr8_1:38393059-38393078 Msa1192530:intron 60.0%
!! AAGGGCTCTTGCCGACTCTG+GGG - chr8_1:38393060-38393079 Msa1192530:intron 60.0%
! GAGAAGTGGTGGCGCAGTTC+TGG - chr8_1:38393454-38393473 Msa1192530:intron 60.0%
!! GGCGCAGTTCTGGACAAACC+GGG - chr8_1:38393464-38393483 Msa1192530:intron 60.0%
GCCTGCACTCGCTCCAGAAG+AGG + chr8_1:38386483-38386502 None:intergenic 65.0%
TGATCGGAGAGGGGAGAGGG+TGG + chr8_1:38386515-38386534 None:intergenic 65.0%
ACCCTCTCCCCTCTCCGATC+AGG - chr8_1:38386514-38386533 Msa1192530:three_prime_UTR 65.0%
!! GGGAAAGTGGCACCGGTGAG+TGG + chr8_1:38386546-38386565 None:intergenic 65.0%
!! GGAAGGGCTCTTGCCGACTC+TGG - chr8_1:38393058-38393077 Msa1192530:intron 65.0%
!! AGGGCTCTTGCCGACTCTGG+GGG - chr8_1:38393061-38393080 Msa1192530:intron 65.0%
TCGGAGAGGGGAGAGGGTGG+AGG + chr8_1:38386512-38386531 None:intergenic 70.0%
!! GGGGAGAGGGTGGAGGCGCG+TGG + chr8_1:38386505-38386524 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 38386413 38393959 38386413 ID=Msa1192530;Name=Msa1192530
chr8_1 mRNA 38386413 38393959 38386413 ID=Msa1192530-mRNA-1;Parent=Msa1192530;Name=Msa1192530-mRNA-1;_AED=0.04;_eAED=0.04;_QI=128|1|1|1|0.9|0.90|11|251|722
chr8_1 exon 38386413 38387986 38386413 ID=Msa1192530-mRNA-1:exon:12542;Parent=Msa1192530-mRNA-1
chr8_1 exon 38388476 38388555 38388476 ID=Msa1192530-mRNA-1:exon:12541;Parent=Msa1192530-mRNA-1
chr8_1 exon 38388788 38388887 38388788 ID=Msa1192530-mRNA-1:exon:12540;Parent=Msa1192530-mRNA-1
chr8_1 exon 38390112 38390230 38390112 ID=Msa1192530-mRNA-1:exon:12539;Parent=Msa1192530-mRNA-1
chr8_1 exon 38390960 38391059 38390960 ID=Msa1192530-mRNA-1:exon:12538;Parent=Msa1192530-mRNA-1
chr8_1 exon 38391570 38391668 38391570 ID=Msa1192530-mRNA-1:exon:12537;Parent=Msa1192530-mRNA-1
chr8_1 exon 38392512 38392607 38392512 ID=Msa1192530-mRNA-1:exon:12536;Parent=Msa1192530-mRNA-1
chr8_1 exon 38392783 38392829 38392783 ID=Msa1192530-mRNA-1:exon:12535;Parent=Msa1192530-mRNA-1
chr8_1 exon 38392948 38393044 38392948 ID=Msa1192530-mRNA-1:exon:12534;Parent=Msa1192530-mRNA-1
chr8_1 exon 38393306 38393418 38393306 ID=Msa1192530-mRNA-1:exon:12533;Parent=Msa1192530-mRNA-1
chr8_1 exon 38393837 38393959 38393837 ID=Msa1192530-mRNA-1:exon:12532;Parent=Msa1192530-mRNA-1
chr8_1 five_prime_UTR 38393837 38393959 38393837 ID=Msa1192530-mRNA-1:five_prime_utr;Parent=Msa1192530-mRNA-1
chr8_1 five_prime_UTR 38393414 38393418 38393414 ID=Msa1192530-mRNA-1:five_prime_utr;Parent=Msa1192530-mRNA-1
chr8_1 CDS 38393306 38393413 38393306 ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1
chr8_1 CDS 38392948 38393044 38392948 ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1
chr8_1 CDS 38392783 38392829 38392783 ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1
chr8_1 CDS 38392512 38392607 38392512 ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1
chr8_1 CDS 38391570 38391668 38391570 ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1
chr8_1 CDS 38390960 38391059 38390960 ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1
chr8_1 CDS 38390112 38390230 38390112 ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1
chr8_1 CDS 38388788 38388887 38388788 ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1
chr8_1 CDS 38388476 38388555 38388476 ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1
chr8_1 CDS 38386664 38387986 38386664 ID=Msa1192530-mRNA-1:cds;Parent=Msa1192530-mRNA-1
chr8_1 three_prime_UTR 38386413 38386663 38386413 ID=Msa1192530-mRNA-1:three_prime_utr;Parent=Msa1192530-mRNA-1
Gene Sequence

>Msa1192530

ATGGCAGGTACTTCAAATGGAAGAGGAGGCAAAAATCCTGTTTTTCCTAAAACTGAGGACTTTGATTATGAGTTGTCACCTTATACTGCTCTTTCAAGGGATTTTCTGGAAACTGCTGCAAGTTCATCCGGAAGCAAAGTACGAGGATTCTTTATTGGAATGGGATTCTTGCCCGGTCTTGTTGATAAAGTTATAGAAGAGAATGGTGAAGAAAATTCAGATGCATTATTAGAGATTCTCTTGAGATGTTCGACAAATGGTGACTCATCAGATTCTCTGGAAGGCTCTCTTAATACAAATGAGCATAGAAGTATCCCAAATTTCTTTCCCAATGCTCATTCAAAAGAGGCTCTTCAAATATCAAATTCAGAGTCTTCTGATTCTCTCGAAAGCTTATTTGATGATAAGGATTCTCCAGAAGTTTCCATGATCAATCAACCAAAAGAGGAGGTTGATGAAATTATTGAAGATATTGAAGATTCAAGAAGTACCTTACTGATGATGAATTTCTCCGTGGAGGAAGTTGAATTTGCAATCCGTAAACTTGGAAATAAAGCGCCAGTTCCTGAGCTGGTAGACTTCATCTTTGCTGCCCAGATTGCTAAAAAAATGAAAAAGGAGGAAGCAGAAGAAGATGATATCAAATGTTATGTTCGAGAAAAGGAGATTAGCAATGAGCAACTCTTTGGAATTATGGCAAAAACGCTTCAGTTGTTTGAAATGGGTTTCTCTGAGAATGAAATATCCTCAGCAGTTGATAAATTAGGTCCAGATGTTCCAATTTCAGAGCTTGCAAACTTCATTTTTGCAGAACAAAATGGGATTGAGTATGTGATGGAATATAAGTATCCCTCTGGTCCTTCTTATTCTTGGATCAAAGAAGAACAAAGCGATATGTATGGTACAGCAGAGGTCAAAGTTGAGGATTTTAGCCATGAACCTTCACAGTCAAGGCAGGTCAACTTAGGGGAAACTGGCACTGGCGAAAGGGTGAAGGAAGAAGATTACATTGATGAGTTCCCCGATGACGTAAAACCAGGCTTTATGGAAAATGATAGAAATAAGAGGCCAAAGTATGAATATGATGATAATTCAAACTCTAGTCTTGATCCTTATTGGGTGGAAGAAATGGTTGATACAGTTGTTGCCACAATGTATAGACGTAACAAATCAACTCCCTCCAGGTCTCTAAGTAGTGTTGCAGCAAAACCTCCATTTTTCTTGTTTGGAAATGTTTCAAACATAACATATGACTCTTGGAAAAAAATGAGTCAGTTTCTATATTGTATTGAACCTGAATTTGTGAACACGGAGTTATTTTCGGCCTTGAACAGAATAGAAGGTTATATACACAATCTTCCAACAGAAAGCAGGTTCCACATTCTTCCAAAGCCACCTATGACTATCGAGGATGCAATTCCCCGGACAAAGAAATGGTGGCCGCCTTGGGATTCAAGAAAGAAGTTGAACTGTAACTATTGTGAAACTGGTGGAATAACTCAACTCTGTGATAGACTAGGAAGGGCTCTTGCCGACTCTGGGGGAATACTCACATCTCAACAGCAGAAAGACATTCTTCGGTATTGCCGTGGTTTGAATCTTGTGTGGACTGGTAAATATAAACTCGGTCCAATAGAACCCGAACACTTGGAGCTTATCTTAGGATACCCTTTGAATCACACTCGTACTGATGAATGCGATTTGACAGAAAGACTTCAATTGCTAAAACACAGCTTCCAGACAGATACATTAGGATATCATCTTTCTGTTTTGAAGCCCATTTTTCCTGCTGGAGTGACTCTGTTGTCAATTTTTAGTGGAATTGGTGGTGCAGAAGTTGCACTTCACCGCCTTGGTATTAAAATAAAAGCTCTCGTCTCGGTCGAGACTTCCGCAACGAAGAGGAAAATTCTTGAGAAGTGGTGGCGCAGTTCTGGACAAACCGGGACTTTGGTTCAGATTGAAGAAATTCAAAAGCTGACTAGTAAAAAGTTTGAGAATCTAATCAATAATTTTGGTGTTTTCGACCTGGTCATTTATCAGAATCCATGCTCTCAGCCAATTGTCAGACCTCATCAAGTTGGAGGTCTCTCAGCTGTAGAATTTTCAGTGTTTTGTGAATCTGTTCGTATTTTGCAACGGGTAAGAGCTCTGTGCGAAAGGAGGTGA

Protein sequence

>Msa1192530

MAGTSNGRGGKNPVFPKTEDFDYELSPYTALSRDFLETAASSSGSKVRGFFIGMGFLPGLVDKVIEENGEENSDALLEILLRCSTNGDSSDSLEGSLNTNEHRSIPNFFPNAHSKEALQISNSESSDSLESLFDDKDSPEVSMINQPKEEVDEIIEDIEDSRSTLLMMNFSVEEVEFAIRKLGNKAPVPELVDFIFAAQIAKKMKKEEAEEDDIKCYVREKEISNEQLFGIMAKTLQLFEMGFSENEISSAVDKLGPDVPISELANFIFAEQNGIEYVMEYKYPSGPSYSWIKEEQSDMYGTAEVKVEDFSHEPSQSRQVNLGETGTGERVKEEDYIDEFPDDVKPGFMENDRNKRPKYEYDDNSNSSLDPYWVEEMVDTVVATMYRRNKSTPSRSLSSVAAKPPFFLFGNVSNITYDSWKKMSQFLYCIEPEFVNTELFSALNRIEGYIHNLPTESRFHILPKPPMTIEDAIPRTKKWWPPWDSRKKLNCNYCETGGITQLCDRLGRALADSGGILTSQQQKDILRYCRGLNLVWTGKYKLGPIEPEHLELILGYPLNHTRTDECDLTERLQLLKHSFQTDTLGYHLSVLKPIFPAGVTLLSIFSGIGGAEVALHRLGIKIKALVSVETSATKRKILEKWWRSSGQTGTLVQIEEIQKLTSKKFENLINNFGVFDLVIYQNPCSQPIVRPHQVGGLSAVEFSVFCESVRILQRVRALCERR*