AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0226540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0226540 MtrunA17_Chr2g0332761 94.617 483 7 2 1 464 1 483 0.0 931
Msa0226540 MtrunA17_Chr2g0332761 91.118 304 24 1 436 736 556 859 0.0 570
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0226540 AT2G41620.1 71.399 486 116 6 1 464 1 485 0.0 680
Msa0226540 AT2G41620.1 71.523 302 83 1 436 734 558 859 1.12e-148 455
Msa0226540 AT3G57350.1 68.789 487 126 8 1 464 1 484 0.0 654
Msa0226540 AT3G57350.1 66.887 302 97 1 436 734 557 858 7.40e-136 422

Find 215 sgRNAs with CRISPR-Local

Find 682 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATAACTCCAATAAAATTT+TGG 0.158785 2_1:-77057826 None:intergenic
CCATTCTGGCAATGAGATTT+TGG 0.159071 2_1:+77055538 Msa0226540:CDS
CGCTCAGTTCCCTCCTCTTC+AGG 0.194338 2_1:+77048318 Msa0226540:CDS
CAGATTCGGTTGAGGGATTA+TGG 0.218780 2_1:+77052723 Msa0226540:intron
AAAGAATGTCATTGATTATT+GGG 0.226836 2_1:+77052372 Msa0226540:CDS
AAAAGAATGTCATTGATTAT+TGG 0.235409 2_1:+77052371 Msa0226540:CDS
AATAATCAATGACATTCTTT+TGG 0.246454 2_1:-77052369 None:intergenic
TATTCATAATTTCACTGTTC+TGG 0.260223 2_1:-77057567 None:intergenic
GGAATCATGTTGATGCATTA+AGG 0.269660 2_1:+77056263 Msa0226540:CDS
CCCTGGTCAAATTGTGTCTA+TGG 0.277801 2_1:+77051378 Msa0226540:CDS
CAAGGGTGCATACGAAAGTT+TGG 0.278688 2_1:+77052122 Msa0226540:CDS
TGTTGCTCCAACCAAAATAA+TGG 0.284089 2_1:-77057743 None:intergenic
TGATTATATGATGAAAGTTT+TGG 0.290773 2_1:+77050423 Msa0226540:CDS
TTCACATCAATTTGCTCCTT+TGG 0.293661 2_1:+77053927 Msa0226540:CDS
GAAAAGCAAGGTTCAGGTTC+TGG 0.296006 2_1:-77048133 None:intergenic
ATATTCTAGCAGGCATTAAA+TGG 0.296493 2_1:-77057672 None:intergenic
TGTACGGCGTCAATTGTTTA+AGG 0.298549 2_1:+77057434 Msa0226540:three_prime_UTR
TACATTATTTGCAATAAAAC+TGG 0.306350 2_1:-77057353 None:intergenic
GAGAGAAGAAGAAAGGGTTT+TGG 0.308237 2_1:-77048192 None:intergenic
TTATTGCAAATAATGTAAAA+AGG 0.309182 2_1:+77057359 Msa0226540:CDS
TAGACCCATCGCAGATAAAA+AGG 0.313748 2_1:+77051453 Msa0226540:CDS
GGTTATCCTTCTGAGCTTCC+TGG 0.316241 2_1:-77050387 None:intergenic
TCTACTCCACAAGTCTCTTC+TGG 0.319960 2_1:+77051403 Msa0226540:CDS
ACTTCTGGCCTTATCCATTC+TGG 0.335329 2_1:+77055524 Msa0226540:CDS
TAATAATTTCACCTGACATC+TGG 0.338858 2_1:-77055578 None:intergenic
GCAGCAGTAGCCACCTCTTC+TGG 0.339368 2_1:-77054060 None:intergenic
CTGCTGTACGCCATCATATC+AGG 0.341394 2_1:+77054156 Msa0226540:CDS
AAAGAATCCGCGCCTTCCTT+CGG 0.347541 2_1:+77052605 Msa0226540:CDS
AAAGATATGGCACCTTGTTC+AGG 0.349423 2_1:+77052182 Msa0226540:CDS
TCGACGCTTGTTGCCTCAAC+AGG 0.349996 2_1:-77049833 None:intergenic
GATGGTGAGAGCCGGACTTC+TGG 0.353288 2_1:+77055509 Msa0226540:CDS
TGCCGGAGAAGAAGGAGAAT+TGG 0.353697 2_1:+77054821 Msa0226540:CDS
TCTAACTGAATTATTGTTAA+GGG 0.357730 2_1:+77054764 Msa0226540:CDS
GTTGAGGGATTATGGGGTTC+TGG 0.358855 2_1:+77052731 Msa0226540:CDS
CACTGTTGTTTAGAGGAACT+TGG 0.371971 2_1:+77048535 Msa0226540:intron
TCGTTCTCAGGTTCATGAAA+TGG 0.382869 2_1:+77050348 Msa0226540:intron
AAGAATCCGCGCCTTCCTTC+GGG 0.385464 2_1:+77052606 Msa0226540:CDS
CGTCAATTGTTTAAGGCAAC+AGG 0.387510 2_1:+77057441 Msa0226540:three_prime_UTR
CGCCTCAGCTCTTACAGTCT+TGG 0.388824 2_1:-77048591 None:intergenic
TTCTAACTGAATTATTGTTA+AGG 0.393622 2_1:+77054763 Msa0226540:CDS
CCAAATGGTATTCACACGTT+TGG 0.393741 2_1:+77057617 Msa0226540:three_prime_UTR
TGTTATCGTAAGGTTTGTTT+CGG 0.396269 2_1:-77048089 None:intergenic
AAGGGTGCATACGAAAGTTT+GGG 0.396800 2_1:+77052123 Msa0226540:CDS
AGATTCGGTTGAGGGATTAT+GGG 0.398506 2_1:+77052724 Msa0226540:intron
TTCAGAGAGGCACTTGTTGA+TGG 0.398841 2_1:-77055456 None:intergenic
CAGTAACCATGCGAAAGATA+TGG 0.400785 2_1:+77052169 Msa0226540:CDS
TATCTAATGTAGGCTTCTCT+TGG 0.401085 2_1:+77052562 Msa0226540:intron
GCTGCTGCTGCAGTCGGCGG+TGG 0.402676 2_1:+77054672 Msa0226540:CDS
GAGATTGAGAGAAGAAGAAA+GGG 0.403592 2_1:-77048198 None:intergenic
GCATGCCAGTGTCAGGAGGC+TGG 0.405039 2_1:+77054894 Msa0226540:CDS
GCTTCTCTTGGTGGTGGTGT+TGG 0.405273 2_1:+77052574 Msa0226540:CDS
AAACCTTACGATAACATTAC+CGG 0.405529 2_1:+77048096 Msa0226540:five_prime_UTR
CTGAATAGAGCAAGGCAGTC+TGG 0.408430 2_1:+77051505 Msa0226540:CDS
GAAGGTTGCTCTGACTTGTC+TGG 0.416937 2_1:+77056396 Msa0226540:CDS
AAATTTGAAAAGCAAGGTTC+AGG 0.418139 2_1:-77048139 None:intergenic
GTTGCTCCAACCAAAATAAT+GGG 0.419582 2_1:-77057742 None:intergenic
CTCACAGAGTGGATTAATAC+TGG 0.419658 2_1:+77054027 Msa0226540:CDS
ATAGCTTGCCGCAACTTTCA+AGG 0.420161 2_1:+77052104 Msa0226540:intron
TTTCTTGTGGTTCAAATTGT+CGG 0.427428 2_1:+77054242 Msa0226540:CDS
AATTCACAAATTGTCAAGAC+TGG 0.427511 2_1:+77056240 Msa0226540:CDS
GGGCAAGGCGCCACCTTGAG+TGG 0.430038 2_1:+77052393 Msa0226540:CDS
TGCTGCGCAGATTCGGTTGA+GGG 0.430889 2_1:+77052716 Msa0226540:intron
CTAATGTAGGCTTCTCTTGG+TGG 0.431600 2_1:+77052565 Msa0226540:intron
GCAAGAGGTGCCGGAGAAGA+AGG 0.439378 2_1:+77054813 Msa0226540:CDS
TTGTATACCAGACCTCTTGA+AGG 0.447490 2_1:+77056378 Msa0226540:CDS
AACAGCAATATCAGGTCCTC+GGG 0.447540 2_1:-77056320 None:intergenic
AGCGGCTTGTTCGAGAAGCT+TGG 0.447832 2_1:-77048290 None:intergenic
AACACATCAACAGCAATATC+AGG 0.449707 2_1:-77056328 None:intergenic
AGAGATTGAGAGAAGAAGAA+AGG 0.450163 2_1:-77048199 None:intergenic
TCCCAATTCTCCTTCTTCTC+CGG 0.453235 2_1:-77054823 None:intergenic
GTGAAGTAGATCGGTCCAAC+TGG 0.454319 2_1:-77048260 None:intergenic
CATGCCAGTGTCAGGAGGCT+GGG 0.455198 2_1:+77054895 Msa0226540:CDS
TGTTGATACCACATGGCAAC+AGG 0.460280 2_1:+77052788 Msa0226540:CDS
GCCGGAGAAGAAGGAGAATT+GGG 0.461170 2_1:+77054822 Msa0226540:CDS
TTACTTGGTGCAAGAGGTGC+CGG 0.461950 2_1:+77054804 Msa0226540:CDS
TTAGCAATCATGTTTGTCCT+TGG 0.468677 2_1:-77051337 None:intergenic
GAATCATGTTGATGCATTAA+GGG 0.468904 2_1:+77056264 Msa0226540:CDS
AGCAATGTGGGTGCCCGCCC+TGG 0.473304 2_1:+77051361 Msa0226540:CDS
AAGCTCAGAAGGATAACCTT+AGG 0.474420 2_1:+77050392 Msa0226540:CDS
CCAAACGTGTGAATACCATT+TGG 0.474587 2_1:-77057617 None:intergenic
AGATTATATCTCCAGGTCAT+AGG 0.474614 2_1:-77057538 None:intergenic
CCAAAATCTCATTGCCAGAA+TGG 0.474737 2_1:-77055538 None:intergenic
TGCAAATCATCCAAACTGTA+TGG 0.475966 2_1:-77054321 None:intergenic
GTTCAAATTGTCGGCTGTGC+GGG 0.476027 2_1:+77054251 Msa0226540:CDS
TGAAGCGGCATGCCAGTGTC+AGG 0.479438 2_1:+77054887 Msa0226540:CDS
TTGCTGCGCAGATTCGGTTG+AGG 0.481656 2_1:+77052715 Msa0226540:intron
CAAGCTGCTGCTGCAGTCGG+CGG 0.483082 2_1:+77054669 Msa0226540:CDS
TCGTCCATTGTTCTAAGTGA+TGG 0.486274 2_1:+77054291 Msa0226540:CDS
AATGTTGAGAACTGGTGATC+GGG 0.486654 2_1:+77054101 Msa0226540:CDS
TCTCATTGCCAGAATGGATA+AGG 0.486894 2_1:-77055532 None:intergenic
TTTCATCTGATTTAGCCAAA+TGG 0.487501 2_1:+77057602 Msa0226540:three_prime_UTR
TGGTCTGATTCCATACAGTT+TGG 0.493704 2_1:+77054311 Msa0226540:CDS
GGCAATGGTCTCTGCCGTCC+AGG 0.496524 2_1:+77050369 Msa0226540:CDS
GAAAGTTTGGGCGTTGATGC+TGG 0.497812 2_1:+77052135 Msa0226540:CDS
TGTTGCCATGTGGTATCAAC+AGG 0.498947 2_1:-77052786 None:intergenic
AACAATGGACGAAGATCCAC+TGG 0.500001 2_1:-77054280 None:intergenic
AGCCCTAAATTTGAAAAGCA+AGG 0.502629 2_1:-77048145 None:intergenic
GGTGGACAGTTGTCGTGGAC+TGG 0.502670 2_1:+77054690 Msa0226540:CDS
AGAGCAACCTTCAAGAGGTC+TGG 0.503916 2_1:-77056385 None:intergenic
GGCAAGGCGCCACCTTGAGT+GGG 0.505759 2_1:+77052394 Msa0226540:CDS
TGCGATGGGTCTACTAGTCA+TGG 0.505854 2_1:-77051443 None:intergenic
TCTGGAGGATGGAGGTGAAC+CGG 0.505956 2_1:-77048115 None:intergenic
AATGGATAAGGCCAGAAGTC+CGG 0.510606 2_1:-77055520 None:intergenic
TGTGAAAGAATGTTGAGAAC+TGG 0.510947 2_1:+77054093 Msa0226540:CDS
TATGTCTCATATATTCTAGC+AGG 0.514689 2_1:-77057682 None:intergenic
GTTCTTGAGATTATATCTCC+AGG 0.516110 2_1:-77057545 None:intergenic
AATAATTTCACCTGACATCT+GGG 0.517279 2_1:-77055577 None:intergenic
GAATAACACGTTACTTGTGC+GGG 0.517343 2_1:-77052455 None:intergenic
CAGTTGTCGTGGACTGGTAG+AGG 0.522609 2_1:+77054696 Msa0226540:CDS
CAACAGCAATATCAGGTCCT+CGG 0.524800 2_1:-77056321 None:intergenic
ACTGAATTATTGTTAAGGGA+TGG 0.530872 2_1:+77054768 Msa0226540:CDS
ATTTCCTTCAGAGTTTAAGC+AGG 0.532379 2_1:+77051302 Msa0226540:CDS
GGCTTGTTCGAGAAGCTTGG+AGG 0.534973 2_1:-77048287 None:intergenic
AAATCCTGCTTAAACTCTGA+AGG 0.537989 2_1:-77051306 None:intergenic
ATACTTACTACCCAGATGTC+AGG 0.538443 2_1:+77055567 Msa0226540:CDS
ATAGAAATTCAGAAGAGAGT+TGG 0.538979 2_1:+77055410 Msa0226540:CDS
ATTCACAAATTGTCAAGACT+GGG 0.541007 2_1:+77056241 Msa0226540:CDS
TGCCGTCCAGGAAGCTCAGA+AGG 0.542467 2_1:+77050381 Msa0226540:CDS
ACAAGTCTCTTCTGGTAGCA+TGG 0.544655 2_1:+77051411 Msa0226540:CDS
AGACACAATTTGACCAGGGC+GGG 0.546301 2_1:-77051374 None:intergenic
AGGGAACTGAGCGGAAGGAG+CGG 0.547144 2_1:-77048308 None:intergenic
TCTTCGAGAACCTGATATGA+TGG 0.547163 2_1:-77054166 None:intergenic
TTGGGCGTTGATGCTGGTGG+TGG 0.547427 2_1:+77052141 Msa0226540:CDS
GAATGTTGAGAACTGGTGAT+CGG 0.548567 2_1:+77054100 Msa0226540:CDS
AAGGTTCAGGTTCTGGAGGA+TGG 0.549668 2_1:-77048126 None:intergenic
AGAGGTCTGGTATACAAGCT+TGG 0.551386 2_1:-77056372 None:intergenic
GAGTTGGTTGATCTCTAAGC+AGG 0.552770 2_1:-77054200 None:intergenic
GCACAAGCTGCTGCTGCAGT+CGG 0.553605 2_1:+77054666 Msa0226540:CDS
TATAATCATTGAAACTCCTA+AGG 0.553720 2_1:-77050408 None:intergenic
ATGTAGGCTTCTCTTGGTGG+TGG 0.555114 2_1:+77052568 Msa0226540:intron
GAAACAGATGCTGATGGATG+AGG 0.555847 2_1:+77052325 Msa0226540:intron
CGTCGAAGAGTATCTGCAGC+AGG 0.556391 2_1:+77049850 Msa0226540:CDS
AAGAATGTCATTGATTATTG+GGG 0.558574 2_1:+77052373 Msa0226540:CDS
TTGCGCTGAAGATTCATCCA+TGG 0.558955 2_1:+77048222 Msa0226540:exon
TAGCTTGCCGCAACTTTCAA+GGG 0.559302 2_1:+77052105 Msa0226540:intron
GGTATCAAGCGCCACTGAGA+AGG 0.560618 2_1:-77055435 None:intergenic
GTGGATTAATACTGGAGGAA+TGG 0.561929 2_1:+77054035 Msa0226540:CDS
GTATGCACCCTTGAAAGTTG+CGG 0.563942 2_1:-77052112 None:intergenic
AGAGTACCTAGTTGCAGCAA+TGG 0.566795 2_1:-77048624 None:intergenic
GAATTATTGTTAAGGGATGG+AGG 0.568335 2_1:+77054771 Msa0226540:CDS
TGTCATTGATTATTGGGGCA+AGG 0.568514 2_1:+77052378 Msa0226540:CDS
GGATAAATCATCGTTCGCCA+TGG 0.570683 2_1:-77048239 None:intergenic
ACTTCGTGCTTTGAGAGCTA+AGG 0.571432 2_1:+77056444 Msa0226540:CDS
TCTCACCATCTAACCTTCCA+CGG 0.572182 2_1:-77055496 None:intergenic
TTTGTGCTCGACCTATGACC+TGG 0.573221 2_1:+77057527 Msa0226540:three_prime_UTR
GAACCGGTAATGTTATCGTA+AGG 0.573429 2_1:-77048099 None:intergenic
ATTTCTCATGTCCCCACTCA+AGG 0.575810 2_1:-77052406 None:intergenic
GAACTGGTGATCGGGTAGGC+CGG 0.576829 2_1:+77054109 Msa0226540:CDS
GGTATACAAGCTTGGACATG+AGG 0.577743 2_1:-77056364 None:intergenic
TGGAGGAATGGTGCCAGAAG+AGG 0.578745 2_1:+77054047 Msa0226540:CDS
GATTCGGTTGAGGGATTATG+GGG 0.578836 2_1:+77052725 Msa0226540:intron
TCGGCGGTGGACAGTTGTCG+TGG 0.580039 2_1:+77054685 Msa0226540:CDS
ATCCTTCTGAGCTTCCTGGA+CGG 0.581007 2_1:-77050383 None:intergenic
GACAATGTGACAGACTCTGA+TGG 0.582532 2_1:+77056418 Msa0226540:CDS
ACCATAGACACAATTTGACC+AGG 0.583473 2_1:-77051379 None:intergenic
AGGCTGTGAAAGTAGATGTA+CGG 0.584005 2_1:+77057418 Msa0226540:exon
ACATCCCAGCCTCCTGACAC+TGG 0.585632 2_1:-77054899 None:intergenic
CGAACGATGATTTATCCAGT+TGG 0.588740 2_1:+77048245 Msa0226540:CDS
TGAATAACACGTTACTTGTG+CGG 0.593735 2_1:-77052456 None:intergenic
GAAGGTTAGATGGTGAGAGC+CGG 0.594461 2_1:+77055501 Msa0226540:CDS
CAACAAGTGCAACCTGAACA+AGG 0.594712 2_1:-77052194 None:intergenic
CACAGTCCATTGCTGCAACT+AGG 0.595342 2_1:+77048618 Msa0226540:CDS
ATGCTACCAGAAGAGACTTG+TGG 0.595882 2_1:-77051409 None:intergenic
GCAAGGCGCCACCTTGAGTG+GGG 0.595896 2_1:+77052395 Msa0226540:CDS
CTAATTGAAACAGATGCTGA+TGG 0.595941 2_1:+77052319 Msa0226540:intron
ATTGAGAGAACCTGAAGAGG+AGG 0.596014 2_1:-77048328 None:intergenic
GAGGTAATGTTGATCAACAA+AGG 0.600325 2_1:+77054715 Msa0226540:CDS
GGGACATGAGAAATACATCA+TGG 0.600464 2_1:+77052415 Msa0226540:CDS
AGGAATGGTGCCAGAAGAGG+TGG 0.600952 2_1:+77054050 Msa0226540:CDS
AAGTCAGAGCAACCTTCAAG+AGG 0.601145 2_1:-77056390 None:intergenic
AAGGTGCCATATCTTTCGCA+TGG 0.602488 2_1:-77052175 None:intergenic
GCGATGGGTCTACTAGTCAT+GGG 0.603772 2_1:-77051442 None:intergenic
GTTGAGACGAACCCGAAGGA+AGG 0.608990 2_1:-77052617 None:intergenic
GGAGGAAGAGTGAAGTAGAT+CGG 0.609858 2_1:-77048269 None:intergenic
AGCGGCATGCCAGTGTCAGG+AGG 0.613053 2_1:+77054890 Msa0226540:CDS
AGAGGAGGGAACTGAGCGGA+AGG 0.613962 2_1:-77048313 None:intergenic
TCAGGTTCATGAAATGGCAA+TGG 0.615202 2_1:+77050354 Msa0226540:intron
CAGACCATCACTTAGAACAA+TGG 0.617186 2_1:-77054295 None:intergenic
TGCCATGTGGTATCAACAGG+TGG 0.627027 2_1:-77052783 None:intergenic
ATGATTGCTAATAGCAATGT+GGG 0.627930 2_1:+77051349 Msa0226540:CDS
AAGCAAGGTTCAGGTTCTGG+AGG 0.629181 2_1:-77048130 None:intergenic
GCGATTGAGAGAACCTGAAG+AGG 0.631149 2_1:-77048331 None:intergenic
TTGAGAACTGGTGATCGGGT+AGG 0.632782 2_1:+77054105 Msa0226540:CDS
TTGTAGCGGATCCAAATGCA+AGG 0.634980 2_1:+77054850 Msa0226540:CDS
TCAGGTCCTCGGGGATCTAG+AGG 0.636836 2_1:-77056310 None:intergenic
GCTGTGCGGGACTGCCCCAG+TGG 0.639313 2_1:+77054264 Msa0226540:CDS
GCACGATAGAGGATTTCTTG+TGG 0.640475 2_1:+77054229 Msa0226540:CDS
TAGTCCTACGACTAAAGACA+TGG 0.640515 2_1:-77057771 None:intergenic
GCAGGATTTCAACATTACCA+AGG 0.642066 2_1:+77051320 Msa0226540:CDS
ATCCAAGACTGTAAGAGCTG+AGG 0.642415 2_1:+77048589 Msa0226540:CDS
TTGAGAGAACCTGAAGAGGA+GGG 0.643698 2_1:-77048327 None:intergenic
GGTTCAAATTGTCGGCTGTG+CGG 0.644450 2_1:+77054250 Msa0226540:CDS
GTTGCAGCAATGGACTGTGA+CGG 0.646464 2_1:-77048614 None:intergenic
GACGAACCCGAAGGAAGGCG+CGG 0.646810 2_1:-77052612 None:intergenic
TCATGTTGATGCATTAAGGG+AGG 0.649430 2_1:+77056267 Msa0226540:CDS
CATGATTGCTAATAGCAATG+TGG 0.654831 2_1:+77051348 Msa0226540:CDS
GTTCAGGTTCTGGAGGATGG+AGG 0.657574 2_1:-77048123 None:intergenic
GAGAGTTGGTTCCTTCTCAG+TGG 0.668521 2_1:+77055424 Msa0226540:CDS
AGCCACCTGTTGATACCACA+TGG 0.668750 2_1:+77052781 Msa0226540:CDS
GTTTCTTACAGCTCACAGAG+TGG 0.670484 2_1:+77054016 Msa0226540:intron
CCATAGACACAATTTGACCA+GGG 0.670943 2_1:-77051378 None:intergenic
TCTCATGTCCCCACTCAAGG+TGG 0.676167 2_1:-77052403 None:intergenic
TTCACAAATTGTCAAGACTG+GGG 0.679733 2_1:+77056242 Msa0226540:CDS
ACAATGGACGAAGATCCACT+GGG 0.689644 2_1:-77054279 None:intergenic
ACAGAGTGGATTAATACTGG+AGG 0.690461 2_1:+77054030 Msa0226540:CDS
TAGACACAATTTGACCAGGG+CGG 0.691604 2_1:-77051375 None:intergenic
AGTTTGGGCGTTGATGCTGG+TGG 0.704332 2_1:+77052138 Msa0226540:CDS
TGTATGAAAGAGTTGCGCAG+AGG 0.704885 2_1:+77057398 Msa0226540:CDS
AGGCATTAAATGGAAGTGAG+CGG 0.705377 2_1:-77057662 None:intergenic
GAGAACAAATAGCTTCAGAG+AGG 0.705513 2_1:-77055469 None:intergenic
CTGAAGAGGAGGGAACTGAG+CGG 0.706436 2_1:-77048317 None:intergenic
AGTCAAGACCTGTTGCCATG+TGG 0.718128 2_1:-77052796 None:intergenic
ACTCTTTCATACAAATCACG+AGG 0.739563 2_1:-77057388 None:intergenic
ACAGCAATATCAGGTCCTCG+GGG 0.757630 2_1:-77056319 None:intergenic
CAATGGACGAAGATCCACTG+GGG 0.814652 2_1:-77054278 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTTTTTTTTTTTTTGAAA+CGG - chr2_1:77049430-77049449 None:intergenic 10.0%
!! ATTTATAAAATAAGAGTTAT+TGG + chr2_1:77050556-77050575 Msa0226540:intron 10.0%
!! TTTATAAAATAAGAGTTATT+GGG + chr2_1:77050557-77050576 Msa0226540:intron 10.0%
!!! TTTCTATTCATTTTTAATAT+TGG - chr2_1:77050923-77050942 None:intergenic 10.0%
!!! ATATTTGCAATTTTATAATT+GGG + chr2_1:77051144-77051163 Msa0226540:intron 10.0%
!! GAAAAAAAAAATTAAATACA+TGG - chr2_1:77052674-77052693 None:intergenic 10.0%
!! TATCTTACTATAAAATTATT+AGG + chr2_1:77052823-77052842 Msa0226540:intron 10.0%
!! ATCTTACTATAAAATTATTA+GGG + chr2_1:77052824-77052843 Msa0226540:intron 10.0%
!! TTAATACATATAAAAAATTG+TGG + chr2_1:77052945-77052964 Msa0226540:intron 10.0%
!! TAATACATATAAAAAATTGT+GGG + chr2_1:77052946-77052965 Msa0226540:intron 10.0%
!!! ATTGATTTTTACTATGATTT+TGG + chr2_1:77048498-77048517 Msa0226540:intron 15.0%
!!! TTGATTTTTACTATGATTTT+GGG + chr2_1:77048499-77048518 Msa0226540:intron 15.0%
!!! ATTTAAGATAGAATCAATTA+TGG + chr2_1:77048911-77048930 Msa0226540:intron 15.0%
!!! TTGTTTTACATATTTCTAAT+AGG + chr2_1:77049097-77049116 Msa0226540:intron 15.0%
!!! TGTTTTACATATTTCTAATA+GGG + chr2_1:77049098-77049117 Msa0226540:intron 15.0%
!! TTATAAAATAAGAGTTATTG+GGG + chr2_1:77050558-77050577 Msa0226540:intron 15.0%
!!! CATATTTGCAATTTTATAAT+TGG + chr2_1:77051143-77051162 Msa0226540:intron 15.0%
!!! ATTTTATTGCATTGTTATAT+TGG + chr2_1:77051173-77051192 Msa0226540:intron 15.0%
!! ATAGAAATTGTATTATTGAT+TGG + chr2_1:77051646-77051665 Msa0226540:intron 15.0%
!! ACATACATATAAATACAAAA+AGG - chr2_1:77052051-77052070 None:intergenic 15.0%
!!! TTTTATTTATTTTCTAGACT+TGG + chr2_1:77052296-77052315 Msa0226540:intron 15.0%
!!! AAAAGTATCTATAAAAACTA+CGG + chr2_1:77053199-77053218 Msa0226540:intron 15.0%
!! ATAATGAAATGTAATCAAAA+AGG - chr2_1:77055204-77055223 None:intergenic 15.0%
!! AAAATAAGTTTAAATAACCT+AGG - chr2_1:77055279-77055298 None:intergenic 15.0%
!!! ATTGATCATTTTTTTTCTTA+AGG - chr2_1:77056138-77056157 None:intergenic 15.0%
!! AATACATATTTAATCATCAA+TGG - chr2_1:77056978-77056997 None:intergenic 15.0%
!! TATTAATACTACTAAACAAT+CGG - chr2_1:77057146-77057165 None:intergenic 15.0%
!! TTATTGCAAATAATGTAAAA+AGG + chr2_1:77057359-77057378 Msa0226540:CDS 15.0%
!!! AATTGTAACCAAAATTTTAT+TGG + chr2_1:77057818-77057837 Msa0226540:three_prime_UTR 15.0%
!!! TAATAACTCCAATAAAATTT+TGG - chr2_1:77057829-77057848 None:intergenic 15.0%
!! AAAAAAGAAGAGTGAAAAAA+TGG - chr2_1:77048358-77048377 None:intergenic 20.0%
!!! TTTTTCACTCTTCTTTTTTT+AGG + chr2_1:77048359-77048378 Msa0226540:intron 20.0%
!!! TGATTTTTACTATGATTTTG+GGG + chr2_1:77048500-77048519 Msa0226540:intron 20.0%
!!! TAAGTTGTTCTATTATGTTT+TGG + chr2_1:77048683-77048702 Msa0226540:intron 20.0%
!!! TACAAAATCAATTTTTGTCA+CGG - chr2_1:77048756-77048775 None:intergenic 20.0%
!! ATTGTAAAAGGATTTATGTT+TGG + chr2_1:77048807-77048826 Msa0226540:intron 20.0%
!!! AAAATTGATTTTGACATGTT+TGG - chr2_1:77048965-77048984 None:intergenic 20.0%
!! TGTATCATAATCAAAGAAAT+TGG - chr2_1:77049027-77049046 None:intergenic 20.0%
!! ATTGCAAAATATATGTTAAG+TGG - chr2_1:77049328-77049347 None:intergenic 20.0%
!!! TTTTCATGATATAACCTATT+TGG + chr2_1:77049571-77049590 Msa0226540:intron 20.0%
!! ATCAATGAAAACTATAATGT+CGG + chr2_1:77050051-77050070 Msa0226540:intron 20.0%
!!! TTTTTTTTAAGATAGTTCAG+AGG - chr2_1:77050136-77050155 None:intergenic 20.0%
!!! TGATTATATGATGAAAGTTT+TGG + chr2_1:77050423-77050442 Msa0226540:CDS 20.0%
!!! TATTTCCTTTTGAAAGTTTA+AGG - chr2_1:77050710-77050729 None:intergenic 20.0%
!!! TTATATTTTTGTGTGGATAT+GGG + chr2_1:77050737-77050756 Msa0226540:intron 20.0%
!! GGATTTATTGAACTATAATA+AGG + chr2_1:77050787-77050806 Msa0226540:intron 20.0%
!! TTATTGAACTATAATAAGGT+TGG + chr2_1:77050791-77050810 Msa0226540:intron 20.0%
!! TATTTGTTCTTGATATTATG+TGG + chr2_1:77051211-77051230 Msa0226540:intron 20.0%
!!! TTTCTATTTCTCTTGAATTT+GGG - chr2_1:77051633-77051652 None:intergenic 20.0%
!!! ATTTCTATTTCTCTTGAATT+TGG - chr2_1:77051634-77051653 None:intergenic 20.0%
!!! TTGTATTATTGATTGGAATA+AGG + chr2_1:77051653-77051672 Msa0226540:intron 20.0%
!! TAGTTAGAATCTTGTAATTT+GGG - chr2_1:77051754-77051773 None:intergenic 20.0%
!! TTAGTTAGAATCTTGTAATT+TGG - chr2_1:77051755-77051774 None:intergenic 20.0%
!! ACAAGATTCTAACTAAATAA+TGG + chr2_1:77051759-77051778 Msa0226540:intron 20.0%
!! CAAGATTCTAACTAAATAAT+GGG + chr2_1:77051760-77051779 Msa0226540:intron 20.0%
!! TGTTAGTTATATAAAGGATA+GGG - chr2_1:77051807-77051826 None:intergenic 20.0%
!! ATGTTAGTTATATAAAGGAT+AGG - chr2_1:77051808-77051827 None:intergenic 20.0%
!! GAGAAATGTTAGTTATATAA+AGG - chr2_1:77051813-77051832 None:intergenic 20.0%
!! AAAAATGTTTACTTCATAAC+AGG - chr2_1:77052280-77052299 None:intergenic 20.0%
!!! AATAATCAATGACATTCTTT+TGG - chr2_1:77052372-77052391 None:intergenic 20.0%
!!! AAAAGAATGTCATTGATTAT+TGG + chr2_1:77052371-77052390 Msa0226540:CDS 20.0%
!!! AAAGAATGTCATTGATTATT+GGG + chr2_1:77052372-77052391 Msa0226540:CDS 20.0%
!!! ATCTTTCTTTTATCTAATGT+AGG + chr2_1:77052552-77052571 Msa0226540:intron 20.0%
!!! TTGTATATGTTACTTTTGAA+TGG + chr2_1:77053068-77053087 Msa0226540:intron 20.0%
!!! ATTTAGAGTGAAAGAAAAAA+AGG + chr2_1:77053135-77053154 Msa0226540:intron 20.0%
!!! AAAGTATCTATAAAAACTAC+GGG + chr2_1:77053200-77053219 Msa0226540:intron 20.0%
!! ACAAGAATTCTGTTTAAAAA+AGG + chr2_1:77053322-77053341 Msa0226540:intron 20.0%
!! CAAGAATTCTGTTTAAAAAA+GGG + chr2_1:77053323-77053342 Msa0226540:intron 20.0%
!! TTTATAGAACTCTATAGATT+AGG + chr2_1:77053415-77053434 Msa0226540:intron 20.0%
!!! ATCTTTTTCTTTTAAGATAC+TGG - chr2_1:77053541-77053560 None:intergenic 20.0%
!! AAAAGAAAAAGATACATCAA+TGG + chr2_1:77053548-77053567 Msa0226540:intron 20.0%
!! GCAACAAAAAAATTAGATAT+AGG - chr2_1:77053791-77053810 None:intergenic 20.0%
!! ATGATGGTTCAAATTTATTT+AGG - chr2_1:77054353-77054372 None:intergenic 20.0%
!! TTCTAACTGAATTATTGTTA+AGG + chr2_1:77054763-77054782 Msa0226540:CDS 20.0%
!! TCTAACTGAATTATTGTTAA+GGG + chr2_1:77054764-77054783 Msa0226540:CDS 20.0%
!!! TTTTATTTTAGAGGAACAAT+AGG + chr2_1:77054953-77054972 Msa0226540:intron 20.0%
!!! TTTATTTTAGAGGAACAATA+GGG + chr2_1:77054954-77054973 Msa0226540:intron 20.0%
!! AAGAAAGTTACAAATTGATT+AGG - chr2_1:77056013-77056032 None:intergenic 20.0%
!!! TTCATAAAATTTGTCAGTTT+TGG + chr2_1:77056031-77056050 Msa0226540:intron 20.0%
!! AGAACAGTTATAGTAAATTA+TGG - chr2_1:77056536-77056555 None:intergenic 20.0%
!! ACTACAATATATTGGATTTA+GGG - chr2_1:77056742-77056761 None:intergenic 20.0%
!! AACTACAATATATTGGATTT+AGG - chr2_1:77056743-77056762 None:intergenic 20.0%
!! AGATTTGGATTTAATATCTA+TGG - chr2_1:77056809-77056828 None:intergenic 20.0%
!! ATTAAATCCAAATCTATACT+AGG + chr2_1:77056814-77056833 Msa0226540:intron 20.0%
!! AATTATGACAGATATTCAAA+AGG - chr2_1:77057105-77057124 None:intergenic 20.0%
!! TACATTATTTGCAATAAAAC+TGG - chr2_1:77057356-77057375 None:intergenic 20.0%
!! CAAATAATGTAAAAAGGAAT+TGG + chr2_1:77057365-77057384 Msa0226540:CDS 20.0%
!! AAAAAGAGAAATGATCTTAT+TGG + chr2_1:77057848-77057867 Msa0226540:three_prime_UTR 20.0%
!!! AACCTTGCTTTTCAAATTTA+GGG + chr2_1:77048143-77048162 Msa0226540:five_prime_UTR 25.0%
!! GGTTAAGTTTATATGCATTT+TGG + chr2_1:77048380-77048399 Msa0226540:intron 25.0%
!!! TTATTTTCACTGTTGTTTAG+AGG + chr2_1:77048528-77048547 Msa0226540:intron 25.0%
!! TTTACTTAAAAGTGAGTTGA+AGG + chr2_1:77048784-77048803 Msa0226540:intron 25.0%
! TAAAAGGATTTATGTTTGGT+TGG + chr2_1:77048811-77048830 Msa0226540:intron 25.0%
! AGAATTAAAGCTAAAAATCC+TGG + chr2_1:77048888-77048907 Msa0226540:intron 25.0%
!! ATTGATTCTATCTTAAATCC+AGG - chr2_1:77048909-77048928 None:intergenic 25.0%
! TAAGATAGAATCAATTATGG+AGG + chr2_1:77048914-77048933 Msa0226540:intron 25.0%
!!! TACACTTTTAGAATCAATTC+TGG + chr2_1:77048984-77049003 Msa0226540:intron 25.0%
!!! CTTTAGCTTTAAGAAAATGA+TGG - chr2_1:77049162-77049181 None:intergenic 25.0%
!! AAAACATCTTTACCTTTTCT+TGG + chr2_1:77049444-77049463 Msa0226540:intron 25.0%
! GTGCATAAATTATAGTGTAA+GGG - chr2_1:77049492-77049511 None:intergenic 25.0%
! TGTGCATAAATTATAGTGTA+AGG - chr2_1:77049493-77049512 None:intergenic 25.0%
! TAGGTTATATCATGAAAACA+AGG - chr2_1:77049569-77049588 None:intergenic 25.0%
! TGTCTATACAACTTAAAGTA+TGG - chr2_1:77049630-77049649 None:intergenic 25.0%
! AATTAAGTTTACATCCAGTT+AGG - chr2_1:77049673-77049692 None:intergenic 25.0%
!! GGATGTAAACTTAATTTTGT+TGG + chr2_1:77049677-77049696 Msa0226540:intron 25.0%
! CTTTACAAAACAACAAAAAC+AGG - chr2_1:77049792-77049811 None:intergenic 25.0%
!! TTTTGTAAAGACAACTTTTG+AGG + chr2_1:77049802-77049821 Msa0226540:intron 25.0%
! AAATGAAAGCAAACTCAAAA+AGG - chr2_1:77050006-77050025 None:intergenic 25.0%
!! ATTTTTGTGAACATTTTTGC+TGG - chr2_1:77050033-77050052 None:intergenic 25.0%
! TATGCTCATAAAAAATAAGG+GGG - chr2_1:77050201-77050220 None:intergenic 25.0%
! CTATGCTCATAAAAAATAAG+GGG - chr2_1:77050202-77050221 None:intergenic 25.0%
! GCTATGCTCATAAAAAATAA+GGG - chr2_1:77050203-77050222 None:intergenic 25.0%
! TGCTATGCTCATAAAAAATA+AGG - chr2_1:77050204-77050223 None:intergenic 25.0%
! TATAATCATTGAAACTCCTA+AGG - chr2_1:77050411-77050430 None:intergenic 25.0%
!!! TTATATGATGAAAGTTTTGG+AGG + chr2_1:77050426-77050445 Msa0226540:CDS 25.0%
! ACAGAATACAGAAAAAATCA+TGG - chr2_1:77050485-77050504 None:intergenic 25.0%
! TCTGTATTCTGTGTAATTAT+TGG + chr2_1:77050493-77050512 Msa0226540:intron 25.0%
!! GTGTAATTATTGGTTATTAC+TGG + chr2_1:77050503-77050522 Msa0226540:intron 25.0%
!! GATTTGGTAAACCATTAATT+TGG + chr2_1:77050584-77050603 Msa0226540:intron 25.0%
! ACATTGAGTATCCAAATTAA+TGG - chr2_1:77050598-77050617 None:intergenic 25.0%
! GCTGAAAATAAGATATCTTA+TGG + chr2_1:77050639-77050658 Msa0226540:intron 25.0%
! AAAAGCCTTAAACTTTCAAA+AGG + chr2_1:77050702-77050721 Msa0226540:intron 25.0%
! CATATCCACACAAAAATATA+AGG - chr2_1:77050738-77050757 None:intergenic 25.0%
!!! CTTATATTTTTGTGTGGATA+TGG + chr2_1:77050736-77050755 Msa0226540:intron 25.0%
! ATTATGACAAAGGAATTGAT+GGG + chr2_1:77050766-77050785 Msa0226540:intron 25.0%
!!! TTTTTGCATACTTTTTGATG+AGG + chr2_1:77050817-77050836 Msa0226540:intron 25.0%
!!! GTTTTCCATAATTTTGACTT+TGG + chr2_1:77050990-77051009 Msa0226540:intron 25.0%
! AAACAATCAATAAGCCAAAT+GGG - chr2_1:77051062-77051081 None:intergenic 25.0%
! AAAACAATCAATAAGCCAAA+TGG - chr2_1:77051063-77051082 None:intergenic 25.0%
!!! TAGCATTTAATGTTTTTGAC+AGG + chr2_1:77051255-77051274 Msa0226540:intron 25.0%
! TTAAAAATCTGAATAGAGCA+AGG + chr2_1:77051497-77051516 Msa0226540:CDS 25.0%
!! GAATACTAGTAAGAACTTTT+GGG - chr2_1:77052027-77052046 None:intergenic 25.0%
!! TGAATACTAGTAAGAACTTT+TGG - chr2_1:77052028-77052047 None:intergenic 25.0%
!! AAGAATGTCATTGATTATTG+GGG + chr2_1:77052373-77052392 Msa0226540:CDS 25.0%
!!! TACGATTTTTAGTCATCAAA+TGG + chr2_1:77052898-77052917 Msa0226540:intron 25.0%
!!! TTTTAGTCATCAAATGGATT+TGG + chr2_1:77052904-77052923 Msa0226540:intron 25.0%
!! TTTAGTCATCAAATGGATTT+GGG + chr2_1:77052905-77052924 Msa0226540:intron 25.0%
! AATATATGAAGCATATCGTT+TGG - chr2_1:77053016-77053035 None:intergenic 25.0%
! AAGTAACATATACAAAGCAT+GGG - chr2_1:77053063-77053082 None:intergenic 25.0%
! AAAGTAACATATACAAAGCA+TGG - chr2_1:77053064-77053083 None:intergenic 25.0%
!!! AAGATTTTTTCACATACTCT+TGG - chr2_1:77053171-77053190 None:intergenic 25.0%
! TTTATAAGTAACCCATACAA+AGG - chr2_1:77053298-77053317 None:intergenic 25.0%
! CAATTTCTTAAATGTGGATA+TGG + chr2_1:77053689-77053708 Msa0226540:intron 25.0%
! TGAAGTGTAACTAAATTGTA+GGG - chr2_1:77053753-77053772 None:intergenic 25.0%
! ATGAAGTGTAACTAAATTGT+AGG - chr2_1:77053754-77053773 None:intergenic 25.0%
!!! AACAGATATATTTTTGTCTG+AGG + chr2_1:77053857-77053876 Msa0226540:intron 25.0%
!!! CCATTTTTTGTATAGTATGA+TGG - chr2_1:77054369-77054388 None:intergenic 25.0%
! CCATCATACTATACAAAAAA+TGG + chr2_1:77054366-77054385 Msa0226540:intron 25.0%
! ATGCTTAAAAGCAAGATATA+GGG - chr2_1:77054411-77054430 None:intergenic 25.0%
! AATGCTTAAAAGCAAGATAT+AGG - chr2_1:77054412-77054431 None:intergenic 25.0%
!!! GCAACAATTTTTAATTGAAG+CGG + chr2_1:77054872-77054891 Msa0226540:CDS 25.0%
!!! ATGCTACTCTTTTATTTTAG+AGG + chr2_1:77054944-77054963 Msa0226540:intron 25.0%
!!! AGATATTTTTAACACCATCT+AGG + chr2_1:77055141-77055160 Msa0226540:intron 25.0%
! TAAGTTTAAATAACCTAGGT+GGG - chr2_1:77055275-77055294 None:intergenic 25.0%
! ATAAGTTTAAATAACCTAGG+TGG - chr2_1:77055276-77055295 None:intergenic 25.0%
! TGAAAAAACTTACTCACAAA+TGG - chr2_1:77055341-77055360 None:intergenic 25.0%
!!! TTTTCCCTTATCTTTTTTCA+TGG + chr2_1:77055742-77055761 Msa0226540:intron 25.0%
! CATTCCATGAAAAAAGATAA+GGG - chr2_1:77055749-77055768 None:intergenic 25.0%
! TCATTCCATGAAAAAAGATA+AGG - chr2_1:77055750-77055769 None:intergenic 25.0%
! CTCTTCAAACTAAATATCTA+TGG + chr2_1:77056054-77056073 Msa0226540:intron 25.0%
!! ATATTTCTATATCCAAGCAA+AGG - chr2_1:77056891-77056910 None:intergenic 25.0%
!!! TAGACATACTATTTTAGAGT+TGG + chr2_1:77057074-77057093 Msa0226540:intron 25.0%
! AGTAGTATTAATATCTGTCA+TGG + chr2_1:77057153-77057172 Msa0226540:intron 25.0%
!! TTTACAAGTTTTACACTACT+GGG - chr2_1:77057486-77057505 None:intergenic 25.0%
! TATTCATAATTTCACTGTTC+TGG - chr2_1:77057570-77057589 None:intergenic 25.0%
!!! CACTTTTTTTCCCATTATTT+TGG + chr2_1:77057732-77057751 Msa0226540:three_prime_UTR 25.0%
!!! TTTTTTCCCATTATTTTGGT+TGG + chr2_1:77057736-77057755 Msa0226540:three_prime_UTR 25.0%
! TGTTATCGTAAGGTTTGTTT+CGG - chr2_1:77048092-77048111 None:intergenic 30.0%
AAACCTTACGATAACATTAC+CGG + chr2_1:77048096-77048115 Msa0226540:five_prime_UTR 30.0%
AAATTTGAAAAGCAAGGTTC+AGG - chr2_1:77048142-77048161 None:intergenic 30.0%
!! GAACCTTGCTTTTCAAATTT+AGG + chr2_1:77048142-77048161 Msa0226540:five_prime_UTR 30.0%
!! TGGTAAGTTTCTAGTTTAGT+TGG + chr2_1:77048703-77048722 Msa0226540:intron 30.0%
ATGTTTGGTTGGATACATTT+AGG + chr2_1:77048822-77048841 Msa0226540:intron 30.0%
!!! CTTTTTTTGCTTTCTCAGTA+GGG + chr2_1:77049065-77049084 Msa0226540:intron 30.0%
!!! TTTTTTTGCTTTCTCAGTAG+GGG + chr2_1:77049066-77049085 Msa0226540:intron 30.0%
!! AGCTTTAAGAAAATGATGGA+AGG - chr2_1:77049158-77049177 None:intergenic 30.0%
!!! TTTATTTTGCACTCACATAC+AGG + chr2_1:77049233-77049252 Msa0226540:intron 30.0%
!! TTTGAAGTCATTTGAGTTGA+AGG + chr2_1:77049300-77049319 Msa0226540:intron 30.0%
GAATAGTACAATCCAAGAAA+AGG - chr2_1:77049459-77049478 None:intergenic 30.0%
AGTTTGTGCAACTTTAAGTA+TGG - chr2_1:77049545-77049564 None:intergenic 30.0%
ACAAGGAATTCTATCCAAAT+AGG - chr2_1:77049588-77049607 None:intergenic 30.0%
ACATCAGGAAAGTTTATACA+AGG - chr2_1:77049605-77049624 None:intergenic 30.0%
ACTTAAAGTATGGTTACATC+AGG - chr2_1:77049620-77049639 None:intergenic 30.0%
TAGGTTATATCAGGAAAACA+AGG - chr2_1:77049654-77049673 None:intergenic 30.0%
! TTTTCCTGATATAACCTAAC+TGG + chr2_1:77049656-77049675 Msa0226540:intron 30.0%
AAACAACAAAAACAGGCAAA+GGG - chr2_1:77049785-77049804 None:intergenic 30.0%
AAAACAACAAAAACAGGCAA+AGG - chr2_1:77049786-77049805 None:intergenic 30.0%
!! AAATTGCTTGTTATCCATCT+TGG + chr2_1:77049887-77049906 Msa0226540:intron 30.0%
AGTGAAAACTAAATCCAAGA+TGG - chr2_1:77049904-77049923 None:intergenic 30.0%
TGTCACAATTCTATTCAGAA+AGG - chr2_1:77050311-77050330 None:intergenic 30.0%
!! TCAGTCCTTATATTTTTGTG+TGG + chr2_1:77050730-77050749 Msa0226540:intron 30.0%
GATTATGACAAAGGAATTGA+TGG + chr2_1:77050765-77050784 Msa0226540:intron 30.0%
! GATGAGGATATATCCTTTTT+CGG + chr2_1:77050833-77050852 Msa0226540:intron 30.0%
! TGAGAAATTTTCATACACAG+AGG - chr2_1:77050884-77050903 None:intergenic 30.0%
CATTGCCAAAGTCAAAATTA+TGG - chr2_1:77050998-77051017 None:intergenic 30.0%
!!! TAATTTTGACTTTGGCAATG+AGG + chr2_1:77050998-77051017 Msa0226540:intron 30.0%
!! GATTGGTGAGAATTTTAAGT+AGG - chr2_1:77051032-77051051 None:intergenic 30.0%
!! CATTTAATGTTTTTGACAGG+AGG + chr2_1:77051258-77051277 Msa0226540:intron 30.0%
ATGATTGCTAATAGCAATGT+GGG + chr2_1:77051349-77051368 Msa0226540:CDS 30.0%
!! AATATAGAGCTCTGAAAGTA+GGG - chr2_1:77051551-77051570 None:intergenic 30.0%
!! TAATATAGAGCTCTGAAAGT+AGG - chr2_1:77051552-77051571 None:intergenic 30.0%
TAGATCAAAAACCTAGTAGA+TGG + chr2_1:77051570-77051589 Msa0226540:intron 30.0%
AATCACAATGTTGATCTGTT+AGG - chr2_1:77051914-77051933 None:intergenic 30.0%
GCTTATGTTCAAAATGATGT+TGG - chr2_1:77051977-77051996 None:intergenic 30.0%
TGTTGTTGTATACTGTTAAC+AGG + chr2_1:77052212-77052231 Msa0226540:intron 30.0%
! GTGTTATTCAGAATTTCAAG+TGG + chr2_1:77052469-77052488 Msa0226540:intron 30.0%
ATGACTAAAAATCGTACTCA+TGG - chr2_1:77052894-77052913 None:intergenic 30.0%
AGTGAAAGAAAAAAAGGTTC+CGG + chr2_1:77053141-77053160 Msa0226540:intron 30.0%
!!! ATTTTTTCACATACTCTTGG+AGG - chr2_1:77053168-77053187 None:intergenic 30.0%
AGAACTCTATAGATTAGGAT+AGG + chr2_1:77053420-77053439 Msa0226540:intron 30.0%
TAGGATTTCAAATATCTCTC+TGG + chr2_1:77053439-77053458 Msa0226540:intron 30.0%
AAAACTCATGTTGTGGTTAT+GGG - chr2_1:77053582-77053601 None:intergenic 30.0%
CTAATAGATGCCTATATACT+CGG - chr2_1:77053619-77053638 None:intergenic 30.0%
ATATAGGCATCTATTAGGTA+CGG + chr2_1:77053622-77053641 Msa0226540:intron 30.0%
TTGTGGCAATTTCTTAAATG+TGG + chr2_1:77053683-77053702 Msa0226540:intron 30.0%
!! ATATATTTTTGTCTGAGGTC+TGG + chr2_1:77053862-77053881 Msa0226540:CDS 30.0%
ACACTATGTATATGTACCAA+AGG - chr2_1:77053946-77053965 None:intergenic 30.0%
TTTCTTGTGGTTCAAATTGT+CGG + chr2_1:77054242-77054261 Msa0226540:CDS 30.0%
TTTAAGCATTCAATTGCTTC+CGG + chr2_1:77054422-77054441 Msa0226540:intron 30.0%
TTAGACAAGTATAATACAGC+CGG - chr2_1:77054444-77054463 None:intergenic 30.0%
ACTGAATTATTGTTAAGGGA+TGG + chr2_1:77054768-77054787 Msa0226540:CDS 30.0%
!! GGAGGTATATATCTTTTACT+TGG + chr2_1:77054789-77054808 Msa0226540:CDS 30.0%
AAAAATTGTTGCCTTGCATT+TGG - chr2_1:77054864-77054883 None:intergenic 30.0%
AATTCAGTAAAAGCAGTTGA+AGG - chr2_1:77054992-77055011 None:intergenic 30.0%
! ATATTTAAGTGCCGCAATAA+GGG - chr2_1:77055051-77055070 None:intergenic 30.0%
!! CAGTTTTTAGACCTTTGTTT+TGG + chr2_1:77055086-77055105 Msa0226540:intron 30.0%
GAGTTAACAAAATTCCTAGA+TGG - chr2_1:77055158-77055177 None:intergenic 30.0%
! TCACAAATGGTGATGAATAA+GGG - chr2_1:77055328-77055347 None:intergenic 30.0%
ATAGAAATTCAGAAGAGAGT+TGG + chr2_1:77055410-77055429 Msa0226540:CDS 30.0%
AATAATTTCACCTGACATCT+GGG - chr2_1:77055580-77055599 None:intergenic 30.0%
TAATAATTTCACCTGACATC+TGG - chr2_1:77055581-77055600 None:intergenic 30.0%
TATGTGAGCAAGGAAATAAA+AGG - chr2_1:77055604-77055623 None:intergenic 30.0%
!!! AAATGAACCTTTTCAAGTTG+TGG + chr2_1:77055680-77055699 Msa0226540:intron 30.0%
ATTTGACACAGATTATGCTT+TGG + chr2_1:77055705-77055724 Msa0226540:intron 30.0%
! TTTTCATGGAATGATCTTTG+AGG + chr2_1:77055756-77055775 Msa0226540:intron 30.0%
GGTAATTTACATGCAAAAAC+AGG + chr2_1:77055847-77055866 Msa0226540:intron 30.0%
AATTTACATGCAAAAACAGG+TGG + chr2_1:77055850-77055869 Msa0226540:intron 30.0%
!!! ATTAGGCTGATAGCTTTTTT+TGG - chr2_1:77055996-77056015 None:intergenic 30.0%
AATTCACAAATTGTCAAGAC+TGG + chr2_1:77056240-77056259 Msa0226540:CDS 30.0%
ATTCACAAATTGTCAAGACT+GGG + chr2_1:77056241-77056260 Msa0226540:CDS 30.0%
GAATCATGTTGATGCATTAA+GGG + chr2_1:77056264-77056283 Msa0226540:CDS 30.0%
AACTGTTCTCAACAAGTATT+TGG + chr2_1:77056547-77056566 Msa0226540:intron 30.0%
! TATATTGGATTTAGGGCATA+AGG - chr2_1:77056735-77056754 None:intergenic 30.0%
TGCTGCTAACTACAATATAT+TGG - chr2_1:77056750-77056769 None:intergenic 30.0%
TCCAAATCTATACTAGGAAA+AGG + chr2_1:77056820-77056839 Msa0226540:intron 30.0%
CCAAATCTATACTAGGAAAA+GGG + chr2_1:77056821-77056840 Msa0226540:intron 30.0%
ACCTGCTGATATATAATTCA+AGG - chr2_1:77056938-77056957 None:intergenic 30.0%
! TATGTGTTACTGTTTCACAA+TGG + chr2_1:77057278-77057297 Msa0226540:intron 30.0%
! CTTTACAAGTTTTACACTAC+TGG - chr2_1:77057487-77057506 None:intergenic 30.0%
TTTCATCTGATTTAGCCAAA+TGG + chr2_1:77057602-77057621 Msa0226540:three_prime_UTR 30.0%
ATATTCTAGCAGGCATTAAA+TGG - chr2_1:77057675-77057694 None:intergenic 30.0%
TATGTCTCATATATTCTAGC+AGG - chr2_1:77057685-77057704 None:intergenic 30.0%
AGCCCTAAATTTGAAAAGCA+AGG - chr2_1:77048148-77048167 None:intergenic 35.0%
GAGATTGAGAGAAGAAGAAA+GGG - chr2_1:77048201-77048220 None:intergenic 35.0%
AGAGATTGAGAGAAGAAGAA+AGG - chr2_1:77048202-77048221 None:intergenic 35.0%
AATCGAATTGAAGCTAAGCA+TGG - chr2_1:77048413-77048432 None:intergenic 35.0%
GATTGCTTATAGTGCATGTT+TGG + chr2_1:77048725-77048744 Msa0226540:intron 35.0%
! GTGAGTTGAAGGATTGTAAA+AGG + chr2_1:77048795-77048814 Msa0226540:intron 35.0%
!!! GCTTTTTTTGCTTTCTCAGT+AGG + chr2_1:77049064-77049083 Msa0226540:intron 35.0%
! CATATTTCTAATAGGGCATG+TGG + chr2_1:77049105-77049124 Msa0226540:intron 35.0%
GTCTATTAGGACATGTATGA+TGG - chr2_1:77049133-77049152 None:intergenic 35.0%
TTGAATTCACGACAGCATAT+AGG + chr2_1:77049186-77049205 Msa0226540:intron 35.0%
ACATCCAGTTAGGTTATATC+AGG - chr2_1:77049663-77049682 None:intergenic 35.0%
!! ATAATGTCGGAGTTCTGAAT+AGG + chr2_1:77050064-77050083 Msa0226540:intron 35.0%
TCAAGTTATGTACCTTGCTA+TGG + chr2_1:77050246-77050265 Msa0226540:intron 35.0%
! CAAGTTATGTACCTTGCTAT+GGG + chr2_1:77050247-77050266 Msa0226540:intron 35.0%
! TTAATTGGTTTCCCATAGCA+AGG - chr2_1:77050261-77050280 None:intergenic 35.0%
GAAGAGTAAGGAGACTTAAT+TGG - chr2_1:77050276-77050295 None:intergenic 35.0%
!! GAATACTCTTTTTCGTTCTC+AGG + chr2_1:77050336-77050355 Msa0226540:intron 35.0%
TAATCTTGCCTTTCATGTCA+TGG + chr2_1:77050455-77050474 Msa0226540:intron 35.0%
AGAGTTATTGGGGTAAGATT+TGG + chr2_1:77050568-77050587 Msa0226540:intron 35.0%
TGGGTACAAGATTATGACAA+AGG + chr2_1:77050756-77050775 Msa0226540:intron 35.0%
TTTCATACACAGAGGAAACA+AGG - chr2_1:77050876-77050895 None:intergenic 35.0%
ACCAATCAAATCATCCCATT+TGG + chr2_1:77051045-77051064 Msa0226540:intron 35.0%
!! AATGTTTTTGACAGGAGGAT+TGG + chr2_1:77051263-77051282 Msa0226540:intron 35.0%
ATTTCCTTCAGAGTTTAAGC+AGG + chr2_1:77051302-77051321 Msa0226540:CDS 35.0%
AAATCCTGCTTAAACTCTGA+AGG - chr2_1:77051309-77051328 None:intergenic 35.0%
TTAGCAATCATGTTTGTCCT+TGG - chr2_1:77051340-77051359 None:intergenic 35.0%
CATGATTGCTAATAGCAATG+TGG + chr2_1:77051348-77051367 Msa0226540:CDS 35.0%
!! ATATAGAGCTCTGAAAGTAG+GGG - chr2_1:77051550-77051569 None:intergenic 35.0%
CTAGGAGAGTTAGTTACATT+GGG - chr2_1:77051855-77051874 None:intergenic 35.0%
ACTAGGAGAGTTAGTTACAT+TGG - chr2_1:77051856-77051875 None:intergenic 35.0%
TCCTAGTAAGCACATTAGTT+GGG + chr2_1:77051869-77051888 Msa0226540:intron 35.0%
!! ATCTGTTAGGTACTGAGTTT+GGG - chr2_1:77051901-77051920 None:intergenic 35.0%
!! CTAGTAAGAACTTTTGGGAA+AGG - chr2_1:77052022-77052041 None:intergenic 35.0%
! ACTTTTGCCTGCAACTTTAT+TGG + chr2_1:77052249-77052268 Msa0226540:intron 35.0%
CTAATTGAAACAGATGCTGA+TGG + chr2_1:77052319-77052338 Msa0226540:intron 35.0%
TGAATAACACGTTACTTGTG+CGG - chr2_1:77052459-77052478 None:intergenic 35.0%
TATCTAATGTAGGCTTCTCT+TGG + chr2_1:77052562-77052581 Msa0226540:intron 35.0%
! ATTTTATTGCTGCGCAGATT+CGG + chr2_1:77052709-77052728 Msa0226540:intron 35.0%
AGACTTGAAATTGAATCCGA+AGG + chr2_1:77052850-77052869 Msa0226540:intron 35.0%
GACTTGAAATTGAATCCGAA+GGG + chr2_1:77052851-77052870 Msa0226540:intron 35.0%
! AGTAATTTGTATGCACCCTT+CGG - chr2_1:77052869-77052888 None:intergenic 35.0%
! CATCAAATGGATTTGGGTTT+AGG + chr2_1:77052911-77052930 Msa0226540:intron 35.0%
! AATGGATTTGGGTTTAGGTA+TGG + chr2_1:77052916-77052935 Msa0226540:intron 35.0%
! ATGGATTTGGGTTTAGGTAT+GGG + chr2_1:77052917-77052936 Msa0226540:intron 35.0%
AAAAATTGTGGGCATTACCA+TGG + chr2_1:77052957-77052976 Msa0226540:intron 35.0%
AAAATTGTGGGCATTACCAT+GGG + chr2_1:77052958-77052977 Msa0226540:intron 35.0%
AAGCATGGGTATTACTGTTA+CGG - chr2_1:77053049-77053068 None:intergenic 35.0%
GTGAAAGAAAAAAAGGTTCC+GGG + chr2_1:77053142-77053161 Msa0226540:intron 35.0%
ATATTGTGCAGGTAAGATGT+AGG - chr2_1:77053240-77053259 None:intergenic 35.0%
ATATGATGAGCATATTGTGC+AGG - chr2_1:77053251-77053270 None:intergenic 35.0%
AAGTAACCCATACAAAGGAA+GGG - chr2_1:77053293-77053312 None:intergenic 35.0%
TAAGTAACCCATACAAAGGA+AGG - chr2_1:77053294-77053313 None:intergenic 35.0%
CAAAACTCATGTTGTGGTTA+TGG - chr2_1:77053583-77053602 None:intergenic 35.0%
AGCAAACAAAACTCATGTTG+TGG - chr2_1:77053589-77053608 None:intergenic 35.0%
GCTTTCATATCCGAGTATAT+AGG + chr2_1:77053606-77053625 Msa0226540:intron 35.0%
CGAGTATATAGGCATCTATT+AGG + chr2_1:77053617-77053636 Msa0226540:intron 35.0%
CATCTATTAGGTACGGTTAA+GGG + chr2_1:77053629-77053648 Msa0226540:intron 35.0%
! TTCACATCAATTTGCTCCTT+TGG + chr2_1:77053927-77053946 Msa0226540:CDS 35.0%
TGTGAAAGAATGTTGAGAAC+TGG + chr2_1:77054093-77054112 Msa0226540:CDS 35.0%
TCTATCGTGCTAAAAAGAGT+TGG - chr2_1:77054219-77054238 None:intergenic 35.0%
!! AACTCTTTTTAGCACGATAG+AGG + chr2_1:77054218-77054237 Msa0226540:CDS 35.0%
TGCAAATCATCCAAACTGTA+TGG - chr2_1:77054324-77054343 None:intergenic 35.0%
AAAAAATGGAAAAGATCCCC+TGG + chr2_1:77054380-77054399 Msa0226540:intron 35.0%
AAGATATAGGGATATACCAG+GGG - chr2_1:77054399-77054418 None:intergenic 35.0%
CAAGATATAGGGATATACCA+GGG - chr2_1:77054400-77054419 None:intergenic 35.0%
GGCTGTATTATACTTGTCTA+AGG + chr2_1:77054443-77054462 Msa0226540:intron 35.0%
TTATACTTGTCTAAGGAAGC+AGG + chr2_1:77054450-77054469 Msa0226540:intron 35.0%
CAGAAGTTTCCACAATTATC+AGG + chr2_1:77054586-77054605 Msa0226540:intron 35.0%
TCCACAATTATCAGGCAATA+TGG + chr2_1:77054594-77054613 Msa0226540:intron 35.0%
TCCATATTGCCTGATAATTG+TGG - chr2_1:77054598-77054617 None:intergenic 35.0%
GAGGTAATGTTGATCAACAA+AGG + chr2_1:77054715-77054734 Msa0226540:CDS 35.0%
GAATTATTGTTAAGGGATGG+AGG + chr2_1:77054771-77054790 Msa0226540:CDS 35.0%
!!! TATCTTTTACTTGGTGCAAG+AGG + chr2_1:77054798-77054817 Msa0226540:CDS 35.0%
AAGAACAATGATTGTGAGCT+AGG - chr2_1:77055024-77055043 None:intergenic 35.0%
! CATATTTAAGTGCCGCAATA+AGG - chr2_1:77055052-77055071 None:intergenic 35.0%
CTTATTGCGGCACTTAAATA+TGG + chr2_1:77055050-77055069 Msa0226540:intron 35.0%
ACAAAGGTCTAAAAACTGAG+TGG - chr2_1:77055084-77055103 None:intergenic 35.0%
! TCTTTAGCTTCACCAGAAAA+AGG - chr2_1:77055124-77055143 None:intergenic 35.0%
ACACGGAGGTAACAAAAATT+AGG - chr2_1:77055304-77055323 None:intergenic 35.0%
! CTCACAAATGGTGATGAATA+AGG - chr2_1:77055329-77055348 None:intergenic 35.0%
AGCAAAAGGAACATAAAGGT+TGG - chr2_1:77055365-77055384 None:intergenic 35.0%
CATCAGCAAAAGGAACATAA+AGG - chr2_1:77055369-77055388 None:intergenic 35.0%
! TTATGTTCCTTTTGCTGATG+CGG + chr2_1:77055369-77055388 Msa0226540:intron 35.0%
AAAAATTCCGCATCAGCAAA+AGG - chr2_1:77055379-77055398 None:intergenic 35.0%
!!! TTTGCTGATGCGGAATTTTT+TGG + chr2_1:77055379-77055398 Msa0226540:intron 35.0%
ATATTTCTCTGCTTGGACTT+TGG + chr2_1:77055621-77055640 Msa0226540:intron 35.0%
TATTTCTCTGCTTGGACTTT+GGG + chr2_1:77055622-77055641 Msa0226540:intron 35.0%
CAAATCACCACAACTTGAAA+AGG - chr2_1:77055690-77055709 None:intergenic 35.0%
AAGTAAGGATATGGCGAAAA+TGG - chr2_1:77055812-77055831 None:intergenic 35.0%
ATATGGGATATACCATTCAC+AGG + chr2_1:77055894-77055913 Msa0226540:intron 35.0%
! CCATCTTTTTGCTGATACTA+CGG + chr2_1:77055923-77055942 Msa0226540:intron 35.0%
TTGTAGTCTTTGTTAGGTGT+TGG + chr2_1:77055946-77055965 Msa0226540:intron 35.0%
TTCACAAATTGTCAAGACTG+GGG + chr2_1:77056242-77056261 Msa0226540:CDS 35.0%
GGAATCATGTTGATGCATTA+AGG + chr2_1:77056263-77056282 Msa0226540:CDS 35.0%
AACACATCAACAGCAATATC+AGG - chr2_1:77056331-77056350 None:intergenic 35.0%
GATATAGACCAACCAAAGAA+GGG - chr2_1:77056486-77056505 None:intergenic 35.0%
CAACAAAAGCAACTAAAGCA+TGG - chr2_1:77056508-77056527 None:intergenic 35.0%
CTATGACATCTTCAAGATAG+AGG - chr2_1:77056643-77056662 None:intergenic 35.0%
CTCTATCTTGAAGATGTCAT+AGG + chr2_1:77056641-77056660 Msa0226540:intron 35.0%
! CCCTTTTCCTAGTATAGATT+TGG - chr2_1:77056824-77056843 None:intergenic 35.0%
AATCTATACTAGGAAAAGGG+TGG + chr2_1:77056824-77056843 Msa0226540:intron 35.0%
!!! GGTGGAAGACAGAAATTTTT+TGG + chr2_1:77056842-77056861 Msa0226540:intron 35.0%
TAAAAGCTATTGCCTTTGCT+TGG + chr2_1:77056876-77056895 Msa0226540:intron 35.0%
GCCTTGAATTATATATCAGC+AGG + chr2_1:77056934-77056953 Msa0226540:intron 35.0%
TTCATTCATCCACTTCTTGA+CGG + chr2_1:77057016-77057035 Msa0226540:intron 35.0%
ACTCTTTCATACAAATCACG+AGG - chr2_1:77057391-77057410 None:intergenic 35.0%
AGATTATATCTCCAGGTCAT+AGG - chr2_1:77057541-77057560 None:intergenic 35.0%
GTTCTTGAGATTATATCTCC+AGG - chr2_1:77057548-77057567 None:intergenic 35.0%
GTTGCTCCAACCAAAATAAT+GGG - chr2_1:77057745-77057764 None:intergenic 35.0%
TGTTGCTCCAACCAAAATAA+TGG - chr2_1:77057746-77057765 None:intergenic 35.0%
! TTTTCCATGTCTTTAGTCGT+AGG + chr2_1:77057767-77057786 Msa0226540:three_prime_UTR 35.0%
GAACCGGTAATGTTATCGTA+AGG - chr2_1:77048102-77048121 None:intergenic 40.0%
!! AGAAGAAGAAAGGGTTTTGG+AGG - chr2_1:77048192-77048211 None:intergenic 40.0%
! GAGAGAAGAAGAAAGGGTTT+TGG - chr2_1:77048195-77048214 None:intergenic 40.0%
CGAACGATGATTTATCCAGT+TGG + chr2_1:77048245-77048264 Msa0226540:CDS 40.0%
! CACTGTTGTTTAGAGGAACT+TGG + chr2_1:77048535-77048554 Msa0226540:intron 40.0%
! ATGATGGAAGGCAGTCTATT+AGG - chr2_1:77049146-77049165 None:intergenic 40.0%
ACAAGCTTAGTTGCTCTTGT+TGG + chr2_1:77049716-77049735 Msa0226540:intron 40.0%
CAAGCTTAGTTGCTCTTGTT+GGG + chr2_1:77049717-77049736 Msa0226540:intron 40.0%
! TGAGGATGTTTTTCCTGTTG+AGG + chr2_1:77049820-77049839 Msa0226540:CDS 40.0%
AATACCACGCACATCAACAA+AGG - chr2_1:77050168-77050187 None:intergenic 40.0%
TCCTTACTCTTCACTTGACT+TGG + chr2_1:77050284-77050303 Msa0226540:intron 40.0%
ACCAAGTCAAGTGAAGAGTA+AGG - chr2_1:77050288-77050307 None:intergenic 40.0%
TCGTTCTCAGGTTCATGAAA+TGG + chr2_1:77050348-77050367 Msa0226540:intron 40.0%
TCAGGTTCATGAAATGGCAA+TGG + chr2_1:77050354-77050373 Msa0226540:intron 40.0%
AAGCTCAGAAGGATAACCTT+AGG + chr2_1:77050392-77050411 Msa0226540:CDS 40.0%
CAGCAAAGCAAGAAAAAGAC+AGG - chr2_1:77050623-77050642 None:intergenic 40.0%
GGAAACAAGGATTACAGACA+AGG - chr2_1:77050863-77050882 None:intergenic 40.0%
GCCAAATGGGATGATTTGAT+TGG - chr2_1:77051049-77051068 None:intergenic 40.0%
AATGCTACTGAGCAGTAAGA+AGG - chr2_1:77051242-77051261 None:intergenic 40.0%
GCAGGATTTCAACATTACCA+AGG + chr2_1:77051320-77051339 Msa0226540:CDS 40.0%
CCATAGACACAATTTGACCA+GGG - chr2_1:77051381-77051400 None:intergenic 40.0%
ACCATAGACACAATTTGACC+AGG - chr2_1:77051382-77051401 None:intergenic 40.0%
TAGACCCATCGCAGATAAAA+AGG + chr2_1:77051453-77051472 Msa0226540:CDS 40.0%
! GATGCCTTTTTATCTGCGAT+GGG - chr2_1:77051460-77051479 None:intergenic 40.0%
! AGATGCCTTTTTATCTGCGA+TGG - chr2_1:77051461-77051480 None:intergenic 40.0%
ATGACTTCAGTGATCGTGTT+TGG + chr2_1:77051605-77051624 Msa0226540:intron 40.0%
AGAGAAATGTCTCTTCTCTG+AGG - chr2_1:77051724-77051743 None:intergenic 40.0%
AGTTAGTTACATTGGGTGAG+GGG - chr2_1:77051848-77051867 None:intergenic 40.0%
GAGTTAGTTACATTGGGTGA+GGG - chr2_1:77051849-77051868 None:intergenic 40.0%
AGAGTTAGTTACATTGGGTG+AGG - chr2_1:77051850-77051869 None:intergenic 40.0%
CTCCTAGTAAGCACATTAGT+TGG + chr2_1:77051868-77051887 Msa0226540:intron 40.0%
!! GATCTGTTAGGTACTGAGTT+TGG - chr2_1:77051902-77051921 None:intergenic 40.0%
! AAGGGTGCATACGAAAGTTT+GGG + chr2_1:77052123-77052142 Msa0226540:CDS 40.0%
CAGTAACCATGCGAAAGATA+TGG + chr2_1:77052169-77052188 Msa0226540:CDS 40.0%
AAAGATATGGCACCTTGTTC+AGG + chr2_1:77052182-77052201 Msa0226540:CDS 40.0%
GGTAGAACCAATAAAGTTGC+AGG - chr2_1:77052259-77052278 None:intergenic 40.0%
! TGTCATTGATTATTGGGGCA+AGG + chr2_1:77052378-77052397 Msa0226540:CDS 40.0%
GGGACATGAGAAATACATCA+TGG + chr2_1:77052415-77052434 Msa0226540:CDS 40.0%
GAATAACACGTTACTTGTGC+GGG - chr2_1:77052458-77052477 None:intergenic 40.0%
TCTGCGCAGCAATAAAATCA+GGG - chr2_1:77052707-77052726 None:intergenic 40.0%
ATCTGCGCAGCAATAAAATC+AGG - chr2_1:77052708-77052727 None:intergenic 40.0%
! AGATTCGGTTGAGGGATTAT+GGG + chr2_1:77052724-77052743 Msa0226540:intron 40.0%
!! ATTTTGATGCTGGTGATGCT+CGG + chr2_1:77052754-77052773 Msa0226540:CDS 40.0%
AAATTGTGGGCATTACCATG+GGG + chr2_1:77052959-77052978 Msa0226540:intron 40.0%
CTGTTTAAAAAAGGGCAACC+CGG + chr2_1:77053331-77053350 Msa0226540:intron 40.0%
GCATCTATTAGGTACGGTTA+AGG + chr2_1:77053628-77053647 Msa0226540:intron 40.0%
!! CTCACAGAGTGGATTAATAC+TGG + chr2_1:77054027-77054046 Msa0226540:CDS 40.0%
!! ACAGAGTGGATTAATACTGG+AGG + chr2_1:77054030-77054049 Msa0226540:CDS 40.0%
! GTGGATTAATACTGGAGGAA+TGG + chr2_1:77054035-77054054 Msa0226540:CDS 40.0%
GAATGTTGAGAACTGGTGAT+CGG + chr2_1:77054100-77054119 Msa0226540:CDS 40.0%
AATGTTGAGAACTGGTGATC+GGG + chr2_1:77054101-77054120 Msa0226540:CDS 40.0%
! TTTTCTTGTCGTATGCAGTC+CGG - chr2_1:77054131-77054150 None:intergenic 40.0%
TCTTCGAGAACCTGATATGA+TGG - chr2_1:77054169-77054188 None:intergenic 40.0%
! TCGTCCATTGTTCTAAGTGA+TGG + chr2_1:77054291-77054310 Msa0226540:CDS 40.0%
CAGACCATCACTTAGAACAA+TGG - chr2_1:77054298-77054317 None:intergenic 40.0%
TGGTCTGATTCCATACAGTT+TGG + chr2_1:77054311-77054330 Msa0226540:CDS 40.0%
GCAAGATATAGGGATATACC+AGG - chr2_1:77054401-77054420 None:intergenic 40.0%
GGATCTATGTATTTGCGTCT+TGG + chr2_1:77054615-77054634 Msa0226540:intron 40.0%
! AGAATTGGGACGTTTTGTAG+CGG + chr2_1:77054836-77054855 Msa0226540:CDS 40.0%
TGTTCTTCATGCCCTTATTG+CGG + chr2_1:77055037-77055056 Msa0226540:intron 40.0%
TGTCTAAGAGGCCAAAACAA+AGG - chr2_1:77055100-77055119 None:intergenic 40.0%
CCAGAAAAAGGATGTCTAAG+AGG - chr2_1:77055112-77055131 None:intergenic 40.0%
! CCTCTTAGACATCCTTTTTC+TGG + chr2_1:77055109-77055128 Msa0226540:intron 40.0%
! TCTCTAGATTTTTCCCACCT+AGG + chr2_1:77055259-77055278 Msa0226540:intron 40.0%
! TGGTGATGAATAAGGGAACA+CGG - chr2_1:77055321-77055340 None:intergenic 40.0%
GAGAACAAATAGCTTCAGAG+AGG - chr2_1:77055472-77055491 None:intergenic 40.0%
! GCTATTTGTTCTCTTTTCCG+TGG + chr2_1:77055479-77055498 Msa0226540:CDS 40.0%
! TTTGTTCTCTTTTCCGTGGA+AGG + chr2_1:77055483-77055502 Msa0226540:CDS 40.0%
TCTCATTGCCAGAATGGATA+AGG - chr2_1:77055535-77055554 None:intergenic 40.0%
CCAAAATCTCATTGCCAGAA+TGG - chr2_1:77055541-77055560 None:intergenic 40.0%
! CCATTCTGGCAATGAGATTT+TGG + chr2_1:77055538-77055557 Msa0226540:CDS 40.0%
ATACTTACTACCCAGATGTC+AGG + chr2_1:77055567-77055586 Msa0226540:CDS 40.0%
AGCAGAGAAATATGTGAGCA+AGG - chr2_1:77055614-77055633 None:intergenic 40.0%
TGCTCACATATTTCTCTGCT+TGG + chr2_1:77055614-77055633 Msa0226540:intron 40.0%
TTCCAAGTTACACACAAGCA+GGG - chr2_1:77055787-77055806 None:intergenic 40.0%
AGCCATGTGAAGTAAGGATA+TGG - chr2_1:77055821-77055840 None:intergenic 40.0%
TCCTTACTTCACATGGCTAT+TGG + chr2_1:77055823-77055842 Msa0226540:intron 40.0%
ACCAATAGCCATGTGAAGTA+AGG - chr2_1:77055827-77055846 None:intergenic 40.0%
TTACTTCACATGGCTATTGG+TGG + chr2_1:77055826-77055845 Msa0226540:intron 40.0%
!! AAGATGAATGACGGGTGATA+TGG + chr2_1:77055877-77055896 Msa0226540:intron 40.0%
!! AGATGAATGACGGGTGATAT+GGG + chr2_1:77055878-77055897 Msa0226540:intron 40.0%
CCGTAGTATCAGCAAAAAGA+TGG - chr2_1:77055926-77055945 None:intergenic 40.0%
CTACGGTTGTAGTCTTTGTT+AGG + chr2_1:77055940-77055959 Msa0226540:intron 40.0%
TCATGTTGATGCATTAAGGG+AGG + chr2_1:77056267-77056286 Msa0226540:CDS 40.0%
TTGTATACCAGACCTCTTGA+AGG + chr2_1:77056378-77056397 Msa0226540:CDS 40.0%
GGATATAGACCAACCAAAGA+AGG - chr2_1:77056487-77056506 None:intergenic 40.0%
TGCCAGAAGTAATAAGCTTG+TGG + chr2_1:77056575-77056594 Msa0226540:intron 40.0%
AGCCACAAGCTTATTACTTC+TGG - chr2_1:77056580-77056599 None:intergenic 40.0%
! TTGGATTTAGGGCATAAGGT+AGG - chr2_1:77056731-77056750 None:intergenic 40.0%
GTTAGCAGCATTTATTCTGC+TGG + chr2_1:77056760-77056779 Msa0226540:intron 40.0%
GTAAAATGATGGTCCAGACA+TGG + chr2_1:77057045-77057064 Msa0226540:intron 40.0%
AGGCTGTGAAAGTAGATGTA+CGG + chr2_1:77057418-77057437 Msa0226540:exon 40.0%
TGTACGGCGTCAATTGTTTA+AGG + chr2_1:77057434-77057453 Msa0226540:three_prime_UTR 40.0%
! CGTCAATTGTTTAAGGCAAC+AGG + chr2_1:77057441-77057460 Msa0226540:three_prime_UTR 40.0%
CCAAACGTGTGAATACCATT+TGG - chr2_1:77057620-77057639 None:intergenic 40.0%
CCAAATGGTATTCACACGTT+TGG + chr2_1:77057617-77057636 Msa0226540:three_prime_UTR 40.0%
AGGCATTAAATGGAAGTGAG+CGG - chr2_1:77057665-77057684 None:intergenic 40.0%
TAGTCCTACGACTAAAGACA+TGG - chr2_1:77057774-77057793 None:intergenic 40.0%
! GAAAAGCAAGGTTCAGGTTC+TGG - chr2_1:77048136-77048155 None:intergenic 45.0%
TTGCGCTGAAGATTCATCCA+TGG + chr2_1:77048222-77048241 Msa0226540:exon 45.0%
GGATAAATCATCGTTCGCCA+TGG - chr2_1:77048242-77048261 None:intergenic 45.0%
GGAGGAAGAGTGAAGTAGAT+CGG - chr2_1:77048272-77048291 None:intergenic 45.0%
TTGAGAGAACCTGAAGAGGA+GGG - chr2_1:77048330-77048349 None:intergenic 45.0%
ATTGAGAGAACCTGAAGAGG+AGG - chr2_1:77048331-77048350 None:intergenic 45.0%
ATCCAAGACTGTAAGAGCTG+AGG + chr2_1:77048589-77048608 Msa0226540:CDS 45.0%
! AGAGTACCTAGTTGCAGCAA+TGG - chr2_1:77048627-77048646 None:intergenic 45.0%
TAAATGCAGAGCAGCTTGCA+AGG + chr2_1:77049275-77049294 Msa0226540:intron 45.0%
AAATGCAGAGCAGCTTGCAA+GGG + chr2_1:77049276-77049295 Msa0226540:intron 45.0%
ATGGTGTGCCATGACATGAA+AGG - chr2_1:77050466-77050485 None:intergenic 45.0%
CAGACAAGGTTCACCGAAAA+AGG - chr2_1:77050849-77050868 None:intergenic 45.0%
TAGACACAATTTGACCAGGG+CGG - chr2_1:77051378-77051397 None:intergenic 45.0%
CCCTGGTCAAATTGTGTCTA+TGG + chr2_1:77051378-77051397 Msa0226540:CDS 45.0%
TCTACTCCACAAGTCTCTTC+TGG + chr2_1:77051403-77051422 Msa0226540:CDS 45.0%
ATGCTACCAGAAGAGACTTG+TGG - chr2_1:77051412-77051431 None:intergenic 45.0%
ACAAGTCTCTTCTGGTAGCA+TGG + chr2_1:77051411-77051430 Msa0226540:CDS 45.0%
AACAGGCTACACCATCTACT+AGG - chr2_1:77051584-77051603 None:intergenic 45.0%
CGATCACTGAAGTCATGAAC+AGG - chr2_1:77051601-77051620 None:intergenic 45.0%
AATGATCCCTATACTCCCAG+AGG + chr2_1:77051691-77051710 Msa0226540:intron 45.0%
!! GCTTTTCCTCTGGGAGTATA+GGG - chr2_1:77051700-77051719 None:intergenic 45.0%
!! AGCTTTTCCTCTGGGAGTAT+AGG - chr2_1:77051701-77051720 None:intergenic 45.0%
GGATAGGGATAGCAATTGAG+AGG - chr2_1:77051792-77051811 None:intergenic 45.0%
GTTAGTTACATTGGGTGAGG+GGG - chr2_1:77051847-77051866 None:intergenic 45.0%
GCCCAACTAATGTGCTTACT+AGG - chr2_1:77051873-77051892 None:intergenic 45.0%
! ATAGCTTGCCGCAACTTTCA+AGG + chr2_1:77052104-77052123 Msa0226540:intron 45.0%
! TAGCTTGCCGCAACTTTCAA+GGG + chr2_1:77052105-77052124 Msa0226540:intron 45.0%
GTATGCACCCTTGAAAGTTG+CGG - chr2_1:77052115-77052134 None:intergenic 45.0%
! CAAGGGTGCATACGAAAGTT+TGG + chr2_1:77052122-77052141 Msa0226540:CDS 45.0%
! AAGGTGCCATATCTTTCGCA+TGG - chr2_1:77052178-77052197 None:intergenic 45.0%
CAACAAGTGCAACCTGAACA+AGG - chr2_1:77052197-77052216 None:intergenic 45.0%
! GAAACAGATGCTGATGGATG+AGG + chr2_1:77052325-77052344 Msa0226540:intron 45.0%
!! TCTTTTGGAAACACGTCGCA+AGG - chr2_1:77052357-77052376 None:intergenic 45.0%
ATTTCTCATGTCCCCACTCA+AGG - chr2_1:77052409-77052428 None:intergenic 45.0%
CTAATGTAGGCTTCTCTTGG+TGG + chr2_1:77052565-77052584 Msa0226540:intron 45.0%
! CAGATTCGGTTGAGGGATTA+TGG + chr2_1:77052723-77052742 Msa0226540:intron 45.0%
! GATTCGGTTGAGGGATTATG+GGG + chr2_1:77052725-77052744 Msa0226540:intron 45.0%
TGTTGCCATGTGGTATCAAC+AGG - chr2_1:77052789-77052808 None:intergenic 45.0%
TGTTGATACCACATGGCAAC+AGG + chr2_1:77052788-77052807 Msa0226540:CDS 45.0%
ATTGTAGGGATAGCAAAGCG+TGG - chr2_1:77053739-77053758 None:intergenic 45.0%
GTTTCTTACAGCTCACAGAG+TGG + chr2_1:77054016-77054035 Msa0226540:intron 45.0%
! GAGTTGGTTGATCTCTAAGC+AGG - chr2_1:77054203-77054222 None:intergenic 45.0%
GCACGATAGAGGATTTCTTG+TGG + chr2_1:77054229-77054248 Msa0226540:CDS 45.0%
ACAATGGACGAAGATCCACT+GGG - chr2_1:77054282-77054301 None:intergenic 45.0%
AACAATGGACGAAGATCCAC+TGG - chr2_1:77054283-77054302 None:intergenic 45.0%
TCTAAGGAAGCAGGAGATGA+AGG + chr2_1:77054459-77054478 Msa0226540:intron 45.0%
GGCTAGCACAATTGATAGGT+GGG - chr2_1:77054502-77054521 None:intergenic 45.0%
GATCGGCTAGCACAATTGAT+AGG - chr2_1:77054506-77054525 None:intergenic 45.0%
TCAATTGTGCTAGCCGATCA+TGG + chr2_1:77054507-77054526 Msa0226540:intron 45.0%
TTCAGAAAGGACGCCATGAT+CGG - chr2_1:77054523-77054542 None:intergenic 45.0%
!! TTTCTGAAGGCATCGGTACT+GGG + chr2_1:77054535-77054554 Msa0226540:intron 45.0%
! ATCGGTACTGGGCAAAAGTT+GGG + chr2_1:77054546-77054565 Msa0226540:intron 45.0%
! GCGTCTTGGTGATCTTCAAA+TGG + chr2_1:77054629-77054648 Msa0226540:intron 45.0%
TCCCAATTCTCCTTCTTCTC+CGG - chr2_1:77054826-77054845 None:intergenic 45.0%
!! TTGTAGCGGATCCAAATGCA+AGG + chr2_1:77054850-77054869 Msa0226540:CDS 45.0%
TGATGAATAAGGGAACACGG+AGG - chr2_1:77055318-77055337 None:intergenic 45.0%
!! TTCAGAGAGGCACTTGTTGA+TGG - chr2_1:77055459-77055478 None:intergenic 45.0%
! CTTTTCCGTGGAAGGTTAGA+TGG + chr2_1:77055491-77055510 Msa0226540:CDS 45.0%
TCTCACCATCTAACCTTCCA+CGG - chr2_1:77055499-77055518 None:intergenic 45.0%
AATGGATAAGGCCAGAAGTC+CGG - chr2_1:77055523-77055542 None:intergenic 45.0%
!! ACTTCTGGCCTTATCCATTC+TGG + chr2_1:77055524-77055543 Msa0226540:CDS 45.0%
AACCCTGCTTGTGTGTAACT+TGG + chr2_1:77055782-77055801 Msa0226540:intron 45.0%
CTTCCAAGTTACACACAAGC+AGG - chr2_1:77055788-77055807 None:intergenic 45.0%
CGCCATATCCTTACTTCACA+TGG + chr2_1:77055816-77055835 Msa0226540:intron 45.0%
GGTGGCACAAAGATGAATGA+CGG + chr2_1:77055868-77055887 Msa0226540:intron 45.0%
GTGGCACAAAGATGAATGAC+GGG + chr2_1:77055869-77055888 Msa0226540:intron 45.0%
AGATGGCGTAATCCTGTGAA+TGG - chr2_1:77055909-77055928 None:intergenic 45.0%
AACAGCAATATCAGGTCCTC+GGG - chr2_1:77056323-77056342 None:intergenic 45.0%
CAACAGCAATATCAGGTCCT+CGG - chr2_1:77056324-77056343 None:intergenic 45.0%
GGTATACAAGCTTGGACATG+AGG - chr2_1:77056367-77056386 None:intergenic 45.0%
AGAGGTCTGGTATACAAGCT+TGG - chr2_1:77056375-77056394 None:intergenic 45.0%
AAGTCAGAGCAACCTTCAAG+AGG - chr2_1:77056393-77056412 None:intergenic 45.0%
GACAATGTGACAGACTCTGA+TGG + chr2_1:77056418-77056437 Msa0226540:CDS 45.0%
!! ACTTCGTGCTTTGAGAGCTA+AGG + chr2_1:77056444-77056463 Msa0226540:CDS 45.0%
AGAGCTAAGGTAATATCCCG+TGG + chr2_1:77056457-77056476 Msa0226540:intron 45.0%
AACCAAAGAAGGGAATCCAC+GGG - chr2_1:77056476-77056495 None:intergenic 45.0%
CAACCAAAGAAGGGAATCCA+CGG - chr2_1:77056477-77056496 None:intergenic 45.0%
AAGCTTGTGGCTCTCTTGAA+TGG + chr2_1:77056588-77056607 Msa0226540:intron 45.0%
ATTCATCCACTTCTTGACGG+AGG + chr2_1:77057019-77057038 Msa0226540:intron 45.0%
! ATGTCTAGAGCAACCATGTC+TGG - chr2_1:77057061-77057080 None:intergenic 45.0%
AATATCCCACTAAGTGGGGT+CGG - chr2_1:77057218-77057237 None:intergenic 45.0%
CACCAATATCCCACTAAGTG+GGG - chr2_1:77057222-77057241 None:intergenic 45.0%
CCACCAATATCCCACTAAGT+GGG - chr2_1:77057223-77057242 None:intergenic 45.0%
ACCACCAATATCCCACTAAG+TGG - chr2_1:77057224-77057243 None:intergenic 45.0%
ACTTAGTGGGATATTGGTGG+TGG + chr2_1:77057223-77057242 Msa0226540:intron 45.0%
TGTATGAAAGAGTTGCGCAG+AGG + chr2_1:77057398-77057417 Msa0226540:CDS 45.0%
!! ATAAATAAAGAAAATAAAAT+AGG - chr2_1:77050670-77050689 None:intergenic 5.0%
!! ATAAAATATAATAAAACATA+TGG - chr2_1:77052993-77053012 None:intergenic 5.0%
!! ATTAACATATAATAAAAAAA+CGG - chr2_1:77053102-77053121 None:intergenic 5.0%
!! AAGGTTCAGGTTCTGGAGGA+TGG - chr2_1:77048129-77048148 None:intergenic 50.0%
! AAGCAAGGTTCAGGTTCTGG+AGG - chr2_1:77048133-77048152 None:intergenic 50.0%
GTGAAGTAGATCGGTCCAAC+TGG - chr2_1:77048263-77048282 None:intergenic 50.0%
GCGATTGAGAGAACCTGAAG+AGG - chr2_1:77048334-77048353 None:intergenic 50.0%
!! GTTGCAGCAATGGACTGTGA+CGG - chr2_1:77048617-77048636 None:intergenic 50.0%
CACAGTCCATTGCTGCAACT+AGG + chr2_1:77048618-77048637 Msa0226540:CDS 50.0%
ATACAGGCTTCTTGCTCGTG+AGG + chr2_1:77049249-77049268 Msa0226540:intron 50.0%
TACAGGCTTCTTGCTCGTGA+GGG + chr2_1:77049250-77049269 Msa0226540:intron 50.0%
CTGTCCTTTGTTGATGTGCG+TGG + chr2_1:77050161-77050180 Msa0226540:intron 50.0%
ATCCTTCTGAGCTTCCTGGA+CGG - chr2_1:77050386-77050405 None:intergenic 50.0%
GGTTATCCTTCTGAGCTTCC+TGG - chr2_1:77050390-77050409 None:intergenic 50.0%
AGACACAATTTGACCAGGGC+GGG - chr2_1:77051377-77051396 None:intergenic 50.0%
GCGATGGGTCTACTAGTCAT+GGG - chr2_1:77051445-77051464 None:intergenic 50.0%
TGCGATGGGTCTACTAGTCA+TGG - chr2_1:77051446-77051465 None:intergenic 50.0%
CTGAATAGAGCAAGGCAGTC+TGG + chr2_1:77051505-77051524 Msa0226540:CDS 50.0%
!! CTCTGAGGAGCTTTTCCTCT+GGG - chr2_1:77051709-77051728 None:intergenic 50.0%
!! TCTCTGAGGAGCTTTTCCTC+TGG - chr2_1:77051710-77051729 None:intergenic 50.0%
!! GAAAGTTTGGGCGTTGATGC+TGG + chr2_1:77052135-77052154 Msa0226540:CDS 50.0%
ATGTAGGCTTCTCTTGGTGG+TGG + chr2_1:77052568-77052587 Msa0226540:intron 50.0%
AAAGAATCCGCGCCTTCCTT+CGG + chr2_1:77052605-77052624 Msa0226540:CDS 50.0%
!! TCAAGTTGAGACGAACCCGA+AGG - chr2_1:77052624-77052643 None:intergenic 50.0%
GTTGAGGGATTATGGGGTTC+TGG + chr2_1:77052731-77052750 Msa0226540:CDS 50.0%
!!! GGGGTTCTGGATTTTGATGC+TGG + chr2_1:77052744-77052763 Msa0226540:CDS 50.0%
AGCCACCTGTTGATACCACA+TGG + chr2_1:77052781-77052800 Msa0226540:CDS 50.0%
TGCCATGTGGTATCAACAGG+TGG - chr2_1:77052786-77052805 None:intergenic 50.0%
AGTCAAGACCTGTTGCCATG+TGG - chr2_1:77052799-77052818 None:intergenic 50.0%
TTCACATACTCTTGGAGGCC+CGG - chr2_1:77053163-77053182 None:intergenic 50.0%
AAGGGAAGTCGTGGTACTGT+TGG + chr2_1:77053378-77053397 Msa0226540:intron 50.0%
AGGGAAGTCGTGGTACTGTT+GGG + chr2_1:77053379-77053398 Msa0226540:intron 50.0%
AACTCATGCGGGTAGCAACT+TGG - chr2_1:77053658-77053677 None:intergenic 50.0%
AGTTGCTACCCGCATGAGTT+TGG + chr2_1:77053658-77053677 Msa0226540:intron 50.0%
GTTGCTACCCGCATGAGTTT+GGG + chr2_1:77053659-77053678 Msa0226540:intron 50.0%
CCACAAACCCAAACTCATGC+GGG - chr2_1:77053669-77053688 None:intergenic 50.0%
GCCACAAACCCAAACTCATG+CGG - chr2_1:77053670-77053689 None:intergenic 50.0%
TTGAGAACTGGTGATCGGGT+AGG + chr2_1:77054105-77054124 Msa0226540:CDS 50.0%
CTGCTGTACGCCATCATATC+AGG + chr2_1:77054156-77054175 Msa0226540:CDS 50.0%
! GGTTCAAATTGTCGGCTGTG+CGG + chr2_1:77054250-77054269 Msa0226540:CDS 50.0%
! GTTCAAATTGTCGGCTGTGC+GGG + chr2_1:77054251-77054270 Msa0226540:CDS 50.0%
CAATGGACGAAGATCCACTG+GGG - chr2_1:77054281-77054300 None:intergenic 50.0%
CGGCTAGCACAATTGATAGG+TGG - chr2_1:77054503-77054522 None:intergenic 50.0%
GATCATGGCGTCCTTTCTGA+AGG + chr2_1:77054522-77054541 Msa0226540:intron 50.0%
!! CAGTACCGATGCCTTCAGAA+AGG - chr2_1:77054536-77054555 None:intergenic 50.0%
!! CTTTCTGAAGGCATCGGTAC+TGG + chr2_1:77054534-77054553 Msa0226540:intron 50.0%
! CATCGGTACTGGGCAAAAGT+TGG + chr2_1:77054545-77054564 Msa0226540:intron 50.0%
TGGGCAAAAGTTGGGAGTGA+TGG + chr2_1:77054554-77054573 Msa0226540:intron 50.0%
!! TTACTTGGTGCAAGAGGTGC+CGG + chr2_1:77054804-77054823 Msa0226540:CDS 50.0%
TGCCGGAGAAGAAGGAGAAT+TGG + chr2_1:77054821-77054840 Msa0226540:CDS 50.0%
GCCGGAGAAGAAGGAGAATT+GGG + chr2_1:77054822-77054841 Msa0226540:CDS 50.0%
! GAGAGTTGGTTCCTTCTCAG+TGG + chr2_1:77055424-77055443 Msa0226540:CDS 50.0%
GAAGGTTAGATGGTGAGAGC+CGG + chr2_1:77055501-77055520 Msa0226540:CDS 50.0%
CGGGGATCTAGAGGCAAAAA+TGG - chr2_1:77056304-77056323 None:intergenic 50.0%
! TTTTTGCCTCTAGATCCCCG+AGG + chr2_1:77056304-77056323 Msa0226540:CDS 50.0%
ACAGCAATATCAGGTCCTCG+GGG - chr2_1:77056322-77056341 None:intergenic 50.0%
AGAGCAACCTTCAAGAGGTC+TGG - chr2_1:77056388-77056407 None:intergenic 50.0%
! GAAGGTTGCTCTGACTTGTC+TGG + chr2_1:77056396-77056415 Msa0226540:CDS 50.0%
ATCCCGTGGATTCCCTTCTT+TGG + chr2_1:77056471-77056490 Msa0226540:intron 50.0%
CGTGGATTCCCTTCTTTGGT+TGG + chr2_1:77056475-77056494 Msa0226540:intron 50.0%
ATCCACTTCTTGACGGAGGT+GGG + chr2_1:77057023-77057042 Msa0226540:intron 50.0%
GACGGAGGTGGGTAAAATGA+TGG + chr2_1:77057034-77057053 Msa0226540:intron 50.0%
GACCCCACTTAGTGGGATAT+TGG + chr2_1:77057217-77057236 Msa0226540:intron 50.0%
CCCACTTAGTGGGATATTGG+TGG + chr2_1:77057220-77057239 Msa0226540:intron 50.0%
!! TAGTGGGATATTGGTGGTGG+TGG + chr2_1:77057226-77057245 Msa0226540:intron 50.0%
TTTGTGCTCGACCTATGACC+TGG + chr2_1:77057527-77057546 Msa0226540:three_prime_UTR 50.0%
TCTGGAGGATGGAGGTGAAC+CGG - chr2_1:77048118-77048137 None:intergenic 55.0%
!! GTTCAGGTTCTGGAGGATGG+AGG - chr2_1:77048126-77048145 None:intergenic 55.0%
! GGCTTGTTCGAGAAGCTTGG+AGG - chr2_1:77048290-77048309 None:intergenic 55.0%
! AGCGGCTTGTTCGAGAAGCT+TGG - chr2_1:77048293-77048312 None:intergenic 55.0%
CTGAAGAGGAGGGAACTGAG+CGG - chr2_1:77048320-77048339 None:intergenic 55.0%
CGCCTCAGCTCTTACAGTCT+TGG - chr2_1:77048594-77048613 None:intergenic 55.0%
CGTACCATGTGCGTCTTGTG+CGG + chr2_1:77049384-77049403 Msa0226540:intron 55.0%
GTACCATGTGCGTCTTGTGC+GGG + chr2_1:77049385-77049404 Msa0226540:intron 55.0%
ATACCCGCACAAGACGCACA+TGG - chr2_1:77049391-77049410 None:intergenic 55.0%
! TCGACGCTTGTTGCCTCAAC+AGG - chr2_1:77049836-77049855 None:intergenic 55.0%
!! CGTCGAAGAGTATCTGCAGC+AGG + chr2_1:77049850-77049869 Msa0226540:CDS 55.0%
!! AGTTTGGGCGTTGATGCTGG+TGG + chr2_1:77052138-77052157 Msa0226540:CDS 55.0%
TCTCATGTCCCCACTCAAGG+TGG - chr2_1:77052406-77052425 None:intergenic 55.0%
!! GCTTCTCTTGGTGGTGGTGT+TGG + chr2_1:77052574-77052593 Msa0226540:CDS 55.0%
AAGAATCCGCGCCTTCCTTC+GGG + chr2_1:77052606-77052625 Msa0226540:CDS 55.0%
GTTGAGACGAACCCGAAGGA+AGG - chr2_1:77052620-77052639 None:intergenic 55.0%
! TTGCTGCGCAGATTCGGTTG+AGG + chr2_1:77052715-77052734 Msa0226540:intron 55.0%
! TGCTGCGCAGATTCGGTTGA+GGG + chr2_1:77052716-77052735 Msa0226540:intron 55.0%
TGGGCATTACCATGGGGCAT+GGG + chr2_1:77052965-77052984 Msa0226540:intron 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - chr2_1:77053353-77053372 None:intergenic 55.0%
TAAAGCTCCCGCATACGCGA+AGG + chr2_1:77053359-77053378 Msa0226540:intron 55.0%
AAAGCTCCCGCATACGCGAA+GGG + chr2_1:77053360-77053379 Msa0226540:intron 55.0%
ACGACTTCCCTTCGCGTATG+CGG - chr2_1:77053370-77053389 None:intergenic 55.0%
TCATGCGGGTAGCAACTTGG+AGG - chr2_1:77053655-77053674 None:intergenic 55.0%
! CCCGCATGAGTTTGGGTTTG+TGG + chr2_1:77053666-77053685 Msa0226540:intron 55.0%
! TGGAGGAATGGTGCCAGAAG+AGG + chr2_1:77054047-77054066 Msa0226540:CDS 55.0%
! AGGAATGGTGCCAGAAGAGG+TGG + chr2_1:77054050-77054069 Msa0226540:CDS 55.0%
! GGCGTCCTTTCTGAAGGCAT+CGG + chr2_1:77054528-77054547 Msa0226540:intron 55.0%
!! CAGTTGTCGTGGACTGGTAG+AGG + chr2_1:77054696-77054715 Msa0226540:CDS 55.0%
GGTATCAAGCGCCACTGAGA+AGG - chr2_1:77055438-77055457 None:intergenic 55.0%
CATCCACTTCTTGACGGAGG+TGG + chr2_1:77057022-77057041 Msa0226540:intron 55.0%
TACCCACCTCCGTCAAGAAG+TGG - chr2_1:77057028-77057047 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr2_1:77057210-77057229 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr2_1:77057209-77057228 Msa0226540:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr2_1:77057210-77057229 Msa0226540:intron 55.0%
AGGGAACTGAGCGGAAGGAG+CGG - chr2_1:77048311-77048330 None:intergenic 60.0%
AGAGGAGGGAACTGAGCGGA+AGG - chr2_1:77048316-77048335 None:intergenic 60.0%
CGCTCAGTTCCCTCCTCTTC+AGG + chr2_1:77048318-77048337 Msa0226540:CDS 60.0%
TGCCGTCCAGGAAGCTCAGA+AGG + chr2_1:77050381-77050400 Msa0226540:CDS 60.0%
!! TTGGGCGTTGATGCTGGTGG+TGG + chr2_1:77052141-77052160 Msa0226540:CDS 60.0%
GTGGGCATTACCATGGGGCA+TGG + chr2_1:77052964-77052983 Msa0226540:intron 60.0%
GGGCATTACCATGGGGCATG+GGG + chr2_1:77052966-77052985 Msa0226540:intron 60.0%
GGCATTACCATGGGGCATGG+GGG + chr2_1:77052967-77052986 Msa0226540:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - chr2_1:77053352-77053371 None:intergenic 60.0%
CGACTTCCCTTCGCGTATGC+GGG - chr2_1:77053369-77053388 None:intergenic 60.0%
GCATACGCGAAGGGAAGTCG+TGG + chr2_1:77053369-77053388 Msa0226540:intron 60.0%
GCAGCAGTAGCCACCTCTTC+TGG - chr2_1:77054063-77054082 None:intergenic 60.0%
GAACTGGTGATCGGGTAGGC+CGG + chr2_1:77054109-77054128 Msa0226540:CDS 60.0%
GCACAAGCTGCTGCTGCAGT+CGG + chr2_1:77054666-77054685 Msa0226540:CDS 60.0%
GGTGGACAGTTGTCGTGGAC+TGG + chr2_1:77054690-77054709 Msa0226540:CDS 60.0%
!! GCAAGAGGTGCCGGAGAAGA+AGG + chr2_1:77054813-77054832 Msa0226540:CDS 60.0%
TGAAGCGGCATGCCAGTGTC+AGG + chr2_1:77054887-77054906 Msa0226540:CDS 60.0%
CATGCCAGTGTCAGGAGGCT+GGG + chr2_1:77054895-77054914 Msa0226540:CDS 60.0%
ACATCCCAGCCTCCTGACAC+TGG - chr2_1:77054902-77054921 None:intergenic 60.0%
GATGGTGAGAGCCGGACTTC+TGG + chr2_1:77055509-77055528 Msa0226540:CDS 60.0%
TCAGGTCCTCGGGGATCTAG+AGG - chr2_1:77056313-77056332 None:intergenic 60.0%
GGCAATGGTCTCTGCCGTCC+AGG + chr2_1:77050369-77050388 Msa0226540:CDS 65.0%
! GGCAAGGCGCCACCTTGAGT+GGG + chr2_1:77052394-77052413 Msa0226540:CDS 65.0%
! GCAAGGCGCCACCTTGAGTG+GGG + chr2_1:77052395-77052414 Msa0226540:CDS 65.0%
GACGAACCCGAAGGAAGGCG+CGG - chr2_1:77052615-77052634 None:intergenic 65.0%
CATATGGCCCCCATGCCCCA+TGG - chr2_1:77052977-77052996 None:intergenic 65.0%
CAAGCTGCTGCTGCAGTCGG+CGG + chr2_1:77054669-77054688 Msa0226540:CDS 65.0%
TCGGCGGTGGACAGTTGTCG+TGG + chr2_1:77054685-77054704 Msa0226540:CDS 65.0%
AGCGGCATGCCAGTGTCAGG+AGG + chr2_1:77054890-77054909 Msa0226540:CDS 65.0%
GCATGCCAGTGTCAGGAGGC+TGG + chr2_1:77054894-77054913 Msa0226540:CDS 65.0%
AGCAATGTGGGTGCCCGCCC+TGG + chr2_1:77051361-77051380 Msa0226540:CDS 70.0%
! GGGCAAGGCGCCACCTTGAG+TGG + chr2_1:77052393-77052412 Msa0226540:CDS 70.0%
GCTGTGCGGGACTGCCCCAG+TGG + chr2_1:77054264-77054283 Msa0226540:CDS 75.0%
GCTGCTGCTGCAGTCGGCGG+TGG + chr2_1:77054672-77054691 Msa0226540:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 77048088 77057884 77048088 ID=Msa0226540;Name=Msa0226540
chr2_1 mRNA 77048088 77057884 77048088 ID=Msa0226540-mRNA-1;Parent=Msa0226540;Name=Msa0226540-mRNA-1;_AED=0.09;_eAED=0.09;_QI=153|0.85|0.8|1|0.92|0.93|15|458|736
chr2_1 exon 77048088 77048339 77048088 ID=Msa0226540-mRNA-1:exon:23328;Parent=Msa0226540-mRNA-1
chr2_1 exon 77048548 77048649 77048548 ID=Msa0226540-mRNA-1:exon:23329;Parent=Msa0226540-mRNA-1
chr2_1 exon 77049812 77049871 77049812 ID=Msa0226540-mRNA-1:exon:23330;Parent=Msa0226540-mRNA-1
chr2_1 exon 77050358 77050447 77050358 ID=Msa0226540-mRNA-1:exon:23331;Parent=Msa0226540-mRNA-1
chr2_1 exon 77051277 77051540 77051277 ID=Msa0226540-mRNA-1:exon:23332;Parent=Msa0226540-mRNA-1
chr2_1 exon 77052108 77052203 77052108 ID=Msa0226540-mRNA-1:exon:23333;Parent=Msa0226540-mRNA-1
chr2_1 exon 77052332 77052463 77052332 ID=Msa0226540-mRNA-1:exon:23334;Parent=Msa0226540-mRNA-1
chr2_1 exon 77052574 77052627 77052574 ID=Msa0226540-mRNA-1:exon:23335;Parent=Msa0226540-mRNA-1
chr2_1 exon 77052726 77052809 77052726 ID=Msa0226540-mRNA-1:exon:23336;Parent=Msa0226540-mRNA-1
chr2_1 exon 77053862 77053948 77053862 ID=Msa0226540-mRNA-1:exon:23337;Parent=Msa0226540-mRNA-1
chr2_1 exon 77054027 77054345 77054027 ID=Msa0226540-mRNA-1:exon:23338;Parent=Msa0226540-mRNA-1
chr2_1 exon 77054658 77054929 77054658 ID=Msa0226540-mRNA-1:exon:23339;Parent=Msa0226540-mRNA-1
chr2_1 exon 77055407 77055588 77055407 ID=Msa0226540-mRNA-1:exon:23340;Parent=Msa0226540-mRNA-1
chr2_1 exon 77056174 77056465 77056174 ID=Msa0226540-mRNA-1:exon:23341;Parent=Msa0226540-mRNA-1
chr2_1 exon 77057349 77057884 77057349 ID=Msa0226540-mRNA-1:exon:23342;Parent=Msa0226540-mRNA-1
chr2_1 five_prime_UTR 77048088 77048240 77048088 ID=Msa0226540-mRNA-1:five_prime_utr;Parent=Msa0226540-mRNA-1
chr2_1 CDS 77048241 77048339 77048241 ID=Msa0226540-mRNA-1:cds;Parent=Msa0226540-mRNA-1
chr2_1 CDS 77048548 77048649 77048548 ID=Msa0226540-mRNA-1:cds;Parent=Msa0226540-mRNA-1
chr2_1 CDS 77049812 77049871 77049812 ID=Msa0226540-mRNA-1:cds;Parent=Msa0226540-mRNA-1
chr2_1 CDS 77050358 77050447 77050358 ID=Msa0226540-mRNA-1:cds;Parent=Msa0226540-mRNA-1
chr2_1 CDS 77051277 77051540 77051277 ID=Msa0226540-mRNA-1:cds;Parent=Msa0226540-mRNA-1
chr2_1 CDS 77052108 77052203 77052108 ID=Msa0226540-mRNA-1:cds;Parent=Msa0226540-mRNA-1
chr2_1 CDS 77052332 77052463 77052332 ID=Msa0226540-mRNA-1:cds;Parent=Msa0226540-mRNA-1
chr2_1 CDS 77052574 77052627 77052574 ID=Msa0226540-mRNA-1:cds;Parent=Msa0226540-mRNA-1
chr2_1 CDS 77052726 77052809 77052726 ID=Msa0226540-mRNA-1:cds;Parent=Msa0226540-mRNA-1
chr2_1 CDS 77053862 77053948 77053862 ID=Msa0226540-mRNA-1:cds;Parent=Msa0226540-mRNA-1
chr2_1 CDS 77054027 77054345 77054027 ID=Msa0226540-mRNA-1:cds;Parent=Msa0226540-mRNA-1
chr2_1 CDS 77054658 77054929 77054658 ID=Msa0226540-mRNA-1:cds;Parent=Msa0226540-mRNA-1
chr2_1 CDS 77055407 77055588 77055407 ID=Msa0226540-mRNA-1:cds;Parent=Msa0226540-mRNA-1
chr2_1 CDS 77056174 77056465 77056174 ID=Msa0226540-mRNA-1:cds;Parent=Msa0226540-mRNA-1
chr2_1 CDS 77057349 77057426 77057349 ID=Msa0226540-mRNA-1:cds;Parent=Msa0226540-mRNA-1
chr2_1 three_prime_UTR 77057427 77057884 77057427 ID=Msa0226540-mRNA-1:three_prime_utr;Parent=Msa0226540-mRNA-1
Gene Sequence

>Msa0226540

ATGGCGAACGATGATTTATCCAGTTGGACCGATCTACTTCACTCTTCCTCCAAGCTTCTCGAACAAGCCGCTCCTTCCGCTCAGTTCCCTCCTCTTCAGAGGAACTTGGATCAACTTGAAGCTTTATCGAAGAAGCTTAAATCCAAGACTGTAAGAGCTGAGGCGCCGTCACAGTCCATTGCTGCAACTAGGTACTCTTTAACAACTTTTGAGGATGTTTTTCCTGTTGAGGCAACAAGCGTCGAAGAGTATCTGCAGCAGGTTCATGAAATGGCAATGGTCTCTGCCGTCCAGGAAGCTCAGAAGGATAACCTTAGGAGTTTCAATGATTATATGATGAAAGTTTTGGAGGAGGATTGGCAAAAAGAAAAGCGTGATTTCCTTCAGAGTTTAAGCAGGATTTCAACATTACCAAGGACAAACATGATTGCTAATAGCAATGTGGGTGCCCGCCCTGGTCAAATTGTGTCTATGGTTTCTACTCCACAAGTCTCTTCTGGTAGCATGGAGATTGTTCCCATGACTAGTAGACCCATCGCAGATAAAAAGGCATCTGTCTATGCTGAAGTAGTTAAAAATCTGAATAGAGCAAGGCAGTCTGGATTGTCATTTAAACTTGCCGCAACTTTCAAGGGTGCATACGAAAGTTTGGGCGTTGATGCTGGTGGTGGAAAATCAGTAACCATGCGAAAGATATGGCACCTTGTTCAGATGCTGATGGATGAGGACTCAACCTTGCGACGTGTTTCCAAAAGAATGTCATTGATTATTGGGGCAAGGCGCCACCTTGAGTGGGGACATGAGAAATACATCATGGATACTATACATAATCATCCCGCACAAGCTTCTCTTGGTGGTGGTGTTGGAAACTTGCAAAGAATCCGCGCCTTCCTTCGGATTCGGTTGAGGGATTATGGGGTTCTGGATTTTGATGCTGGTGATGCTCGGAGACAGCCACCTGTTGATACCACATGGCAACAGATATATTTTTGTCTGAGGTCTGGTTATTACGATGAAGCAAGAAATGTTGCTCTATCTTCGCGTGCTTCACATCAATTTGCTCCTTTGCTCACAGAGTGGATTAATACTGGAGGAATGGTGCCAGAAGAGGTGGCTACTGCTGCATCAGAAGAATGTGAAAGAATGTTGAGAACTGGTGATCGGGTAGGCCGGACTGCATACGACAAGAAAAAATTACTGCTGTACGCCATCATATCAGGTTCTCGAAGACATATTGATCGCCTGCTTAGAGATCAACCAACTCTTTTTAGCACGATAGAGGATTTCTTGTGGTTCAAATTGTCGGCTGTGCGGGACTGCCCCAGTGGATCTTCGTCCATTGTTCTAAGTGATGGTCTGATTCCATACAGTTTGGATGATTTGCAAAAATATTATGCACAAGCTGCTGCTGCAGTCGGCGGTGGACAGTTGTCGTGGACTGGTAGAGGTAATGTTGATCAACAAAGGCAGAGAAACTTGATGCTGAAGCAGCTTCTAACTGAATTATTGTTAAGGGATGGAGGTATATATCTTTTACTTGGTGCAAGAGGTGCCGGAGAAGAAGGAGAATTGGGACGTTTTGTAGCGGATCCAAATGCAAGGCAACAATTTTTAATTGAAGCGGCATGCCAGTGTCAGGAGGCTGGGATGTATGACAAATCTATAGAAATTCAGAAGAGAGTTGGTTCCTTCTCAGTGGCGCTTGATACCATCAACAAGTGCCTCTCTGAAGCTATTTGTTCTCTTTTCCGTGGAAGGTTAGATGGTGAGAGCCGGACTTCTGGCCTTATCCATTCTGGCAATGAGATTTTGGAGACATATACTTACTACCCAGATGTCAGTCATCAAGAGAGAGAGCAAGTTTTTGAGCAGCAAACTGTATTGAGACAACTTGAGTCAATATTATCAATTCACAAATTGTCAAGACTGGGGAATCATGTTGATGCATTAAGGGAGGTTGCTAAACTTCCATTTTTGCCTCTAGATCCCCGAGGACCTGATATTGCTGTTGATGTGTTTGAAAATTTATCTCCTCATGTCCAAGCTTGTATACCAGACCTCTTGAAGGTTGCTCTGACTTGTCTGGACAATGTGACAGACTCTGATGGATCACTTCGTGCTTTGAGAGCTAAGATTTCCAGTTTTATTGCAAATAATGTAAAAAGGAATTGGCCTCGTGATTTGTATGAAAGAGTTGCGCAGAGGCTGTGA
Protein sequence

>Msa0226540

MANDDLSSWTDLLHSSSKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKTVRAEAPSQSIAATRYSLTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQKDNLRSFNDYMMKVLEEDWQKEKRDFLQSLSRISTLPRTNMIANSNVGARPGQIVSMVSTPQVSSGSMEIVPMTSRPIADKKASVYAEVVKNLNRARQSGLSFKLAATFKGAYESLGVDAGGGKSVTMRKIWHLVQMLMDEDSTLRRVSKRMSLIIGARRHLEWGHEKYIMDTIHNHPAQASLGGGVGNLQRIRAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRSGYYDEARNVALSSRASHQFAPLLTEWINTGGMVPEEVATAASEECERMLRTGDRVGRTAYDKKKLLLYAIISGSRRHIDRLLRDQPTLFSTIEDFLWFKLSAVRDCPSGSSSIVLSDGLIPYSLDDLQKYYAQAAAAVGGGQLSWTGRGNVDQQRQRNLMLKQLLTELLLRDGGIYLLLGARGAGEEGELGRFVADPNARQQFLIEAACQCQEAGMYDKSIEIQKRVGSFSVALDTINKCLSEAICSLFRGRLDGESRTSGLIHSGNEILETYTYYPDVSHQEREQVFEQQTVLRQLESILSIHKLSRLGNHVDALREVAKLPFLPLDPRGPDIAVDVFENLSPHVQACIPDLLKVALTCLDNVTDSDGSLRALRAKISSFIANNVKRNWPRDLYERVAQRL*