Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208550 | sp|Q93Z25|PLY22_ARATH | 82.045 | 401 | 71 | 1 | 8 | 407 | 32 | 432 | 0.0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208550 | G7JMP6 | 99.263 | 407 | 3 | 0 | 1 | 407 | 1 | 407 | 0.0 | 842 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0019640 | Msa1208550 | 0.802230 | 6.191620e-49 | -8.615850e-47 |
| Msa1208550 | Msa1208670 | 0.982894 | 2.783710e-156 | -8.615850e-47 |
| Msa1208550 | Msa1258860 | 0.968716 | 4.482739e-129 | -8.615850e-47 |
| Msa1208550 | Msa1330130 | 0.972849 | 1.928128e-135 | -8.615850e-47 |
| Msa1208550 | Msa1369810 | 0.958192 | 4.318862e-116 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208550 | MtrunA17_Chr4g0058051 | 99.263 | 407 | 3 | 0 | 1 | 407 | 1 | 407 | 0.0 | 842 |
| Msa1208550 | MtrunA17_Chr3g0116521 | 86.978 | 407 | 52 | 1 | 1 | 407 | 1 | 406 | 0.0 | 688 |
| Msa1208550 | MtrunA17_Chr6g0458201 | 79.052 | 401 | 83 | 1 | 7 | 407 | 5 | 404 | 0.0 | 676 |
| Msa1208550 | MtrunA17_Chr3g0123321 | 79.177 | 389 | 77 | 3 | 19 | 407 | 19 | 403 | 0.0 | 603 |
| Msa1208550 | MtrunA17_Chr7g0237761 | 69.287 | 407 | 121 | 2 | 1 | 407 | 42 | 444 | 0.0 | 592 |
| Msa1208550 | MtrunA17_Chr1g0169731 | 72.680 | 388 | 105 | 1 | 20 | 407 | 64 | 450 | 0.0 | 588 |
| Msa1208550 | MtrunA17_Chr3g0123331 | 68.250 | 400 | 125 | 2 | 9 | 407 | 8 | 406 | 0.0 | 557 |
| Msa1208550 | MtrunA17_Chr1g0210321 | 64.800 | 375 | 128 | 2 | 29 | 400 | 35 | 408 | 0.0 | 524 |
| Msa1208550 | MtrunA17_Chr1g0180381 | 61.461 | 397 | 143 | 3 | 14 | 403 | 22 | 415 | 0.0 | 516 |
| Msa1208550 | MtrunA17_Chr7g0264891 | 63.918 | 388 | 136 | 3 | 14 | 400 | 23 | 407 | 1.32e-179 | 508 |
| Msa1208550 | MtrunA17_Chr4g0060211 | 58.140 | 387 | 152 | 3 | 28 | 407 | 51 | 434 | 4.37e-167 | 475 |
| Msa1208550 | MtrunA17_Chr5g0416061 | 57.181 | 376 | 161 | 0 | 32 | 407 | 74 | 449 | 8.42e-158 | 452 |
| Msa1208550 | MtrunA17_Chr4g0075231 | 61.429 | 350 | 132 | 2 | 58 | 407 | 39 | 385 | 9.00e-158 | 449 |
| Msa1208550 | MtrunA17_Chr8g0362561 | 58.333 | 372 | 144 | 2 | 47 | 407 | 84 | 455 | 3.82e-157 | 451 |
| Msa1208550 | MtrunA17_Chr2g0288921 | 58.857 | 350 | 141 | 2 | 58 | 407 | 63 | 409 | 6.87e-152 | 436 |
| Msa1208550 | MtrunA17_Chr5g0416041 | 56.316 | 380 | 162 | 1 | 32 | 407 | 70 | 449 | 4.87e-151 | 435 |
| Msa1208550 | MtrunA17_Chr6g0452861 | 57.627 | 354 | 150 | 0 | 54 | 407 | 100 | 453 | 1.33e-149 | 431 |
| Msa1208550 | MtrunA17_Chr7g0216581 | 57.345 | 354 | 151 | 0 | 54 | 407 | 98 | 451 | 1.90e-143 | 416 |
| Msa1208550 | MtrunA17_Chr8g0373761 | 44.225 | 355 | 189 | 7 | 58 | 407 | 42 | 392 | 2.74e-96 | 293 |
| Msa1208550 | MtrunA17_Chr8g0373721 | 43.785 | 354 | 192 | 6 | 58 | 407 | 42 | 392 | 5.66e-96 | 292 |
| Msa1208550 | MtrunA17_Chr3g0089181 | 44.663 | 356 | 186 | 9 | 58 | 407 | 23 | 373 | 7.82e-95 | 289 |
| Msa1208550 | MtrunA17_Chr8g0373731 | 44.507 | 355 | 188 | 7 | 58 | 407 | 42 | 392 | 2.19e-89 | 275 |
| Msa1208550 | MtrunA17_Chr8g0373701 | 42.817 | 355 | 194 | 8 | 58 | 407 | 97 | 447 | 6.79e-89 | 276 |
| Msa1208550 | MtrunA17_Chr5g0403481 | 44.225 | 355 | 189 | 7 | 58 | 407 | 41 | 391 | 4.07e-87 | 270 |
| Msa1208550 | MtrunA17_Chr5g0403461 | 44.225 | 355 | 189 | 7 | 58 | 407 | 41 | 391 | 4.07e-87 | 270 |
| Msa1208550 | MtrunA17_Chr5g0403491 | 44.225 | 355 | 189 | 7 | 58 | 407 | 41 | 391 | 4.07e-87 | 270 |
| Msa1208550 | MtrunA17_Chr5g0403391 | 43.662 | 355 | 191 | 7 | 58 | 407 | 41 | 391 | 1.06e-86 | 268 |
| Msa1208550 | MtrunA17_Chr5g0414541 | 43.662 | 355 | 191 | 7 | 58 | 407 | 41 | 391 | 1.93e-86 | 268 |
| Msa1208550 | MtrunA17_Chr5g0403411 | 43.380 | 355 | 192 | 7 | 58 | 407 | 41 | 391 | 1.11e-82 | 258 |
| Msa1208550 | MtrunA17_Chr4g0031851 | 43.269 | 312 | 170 | 6 | 97 | 405 | 28 | 335 | 5.97e-80 | 250 |
| Msa1208550 | MtrunA17_Chr3g0113551 | 60.894 | 179 | 54 | 2 | 152 | 328 | 122 | 286 | 9.12e-71 | 224 |
| Msa1208550 | MtrunA17_Chr1g0183941 | 42.537 | 268 | 151 | 3 | 133 | 399 | 1 | 266 | 5.40e-68 | 216 |
| Msa1208550 | MtrunA17_Chr2g0288901 | 51.282 | 156 | 72 | 2 | 252 | 407 | 5 | 156 | 1.76e-50 | 167 |
| Msa1208550 | MtrunA17_Chr1g0212931 | 37.329 | 292 | 157 | 7 | 71 | 361 | 9 | 275 | 2.85e-46 | 162 |
| Msa1208550 | MtrunA17_Chr2g0288911 | 59.836 | 122 | 48 | 1 | 133 | 253 | 1 | 122 | 5.23e-44 | 149 |
| Msa1208550 | MtrunA17_Chr1g0182021 | 36.364 | 286 | 156 | 6 | 77 | 361 | 64 | 324 | 5.49e-39 | 144 |
| Msa1208550 | MtrunA17_Chr6g0481851 | 47.436 | 156 | 80 | 2 | 208 | 363 | 71 | 224 | 1.53e-37 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208550 | AT5G63180.1 | 82.045 | 401 | 71 | 1 | 8 | 407 | 32 | 432 | 0.0 | 681 |
| Msa1208550 | AT1G67750.1 | 83.033 | 389 | 63 | 2 | 19 | 407 | 23 | 408 | 0.0 | 662 |
| Msa1208550 | AT4G24780.2 | 80.685 | 409 | 76 | 3 | 1 | 407 | 1 | 408 | 0.0 | 658 |
| Msa1208550 | AT4G24780.1 | 80.685 | 409 | 76 | 3 | 1 | 407 | 1 | 408 | 0.0 | 658 |
| Msa1208550 | AT4G13710.1 | 73.698 | 384 | 96 | 2 | 28 | 407 | 88 | 470 | 0.0 | 621 |
| Msa1208550 | AT3G27400.2 | 73.188 | 414 | 102 | 4 | 1 | 407 | 5 | 416 | 0.0 | 620 |
| Msa1208550 | AT3G27400.1 | 73.188 | 414 | 102 | 4 | 1 | 407 | 1 | 412 | 0.0 | 620 |
| Msa1208550 | AT4G13710.2 | 73.698 | 384 | 96 | 2 | 28 | 407 | 69 | 451 | 0.0 | 619 |
| Msa1208550 | AT3G07010.1 | 72.513 | 382 | 104 | 1 | 26 | 407 | 36 | 416 | 0.0 | 585 |
| Msa1208550 | AT1G04680.1 | 69.471 | 416 | 109 | 4 | 9 | 407 | 15 | 429 | 0.0 | 585 |
| Msa1208550 | AT3G07010.2 | 73.210 | 377 | 100 | 1 | 31 | 407 | 8 | 383 | 0.0 | 580 |
| Msa1208550 | AT3G24670.1 | 70.157 | 382 | 113 | 1 | 26 | 407 | 60 | 440 | 0.0 | 574 |
| Msa1208550 | AT3G24230.1 | 65.375 | 413 | 132 | 3 | 4 | 407 | 41 | 451 | 0.0 | 564 |
| Msa1208550 | AT5G48900.1 | 72.775 | 382 | 103 | 1 | 26 | 407 | 37 | 417 | 0.0 | 560 |
| Msa1208550 | AT4G13210.2 | 71.540 | 383 | 107 | 2 | 26 | 407 | 57 | 438 | 0.0 | 560 |
| Msa1208550 | AT4G13210.1 | 71.540 | 383 | 107 | 2 | 26 | 407 | 20 | 401 | 0.0 | 558 |
| Msa1208550 | AT3G53190.1 | 63.119 | 404 | 137 | 3 | 8 | 400 | 13 | 415 | 0.0 | 524 |
| Msa1208550 | AT5G04310.3 | 61.750 | 400 | 137 | 3 | 14 | 400 | 40 | 436 | 3.56e-176 | 500 |
| Msa1208550 | AT5G04310.1 | 61.386 | 404 | 140 | 3 | 14 | 404 | 40 | 440 | 1.40e-174 | 498 |
| Msa1208550 | AT5G04310.2 | 61.386 | 404 | 140 | 3 | 14 | 404 | 40 | 440 | 1.40e-174 | 498 |
| Msa1208550 | AT3G54920.1 | 61.499 | 387 | 124 | 5 | 29 | 400 | 37 | 413 | 1.78e-171 | 489 |
| Msa1208550 | AT5G55720.1 | 57.393 | 399 | 155 | 6 | 11 | 407 | 7 | 392 | 1.69e-165 | 470 |
| Msa1208550 | AT1G11920.1 | 62.000 | 350 | 131 | 2 | 58 | 407 | 37 | 384 | 6.15e-159 | 453 |
| Msa1208550 | AT1G14420.1 | 56.667 | 360 | 151 | 1 | 53 | 407 | 100 | 459 | 1.59e-155 | 447 |
| Msa1208550 | AT2G02720.1 | 57.983 | 357 | 145 | 1 | 56 | 407 | 99 | 455 | 2.49e-153 | 441 |
| Msa1208550 | AT4G22090.1 | 59.429 | 350 | 139 | 2 | 58 | 407 | 47 | 393 | 8.57e-153 | 437 |
| Msa1208550 | AT4G22080.1 | 58.857 | 350 | 141 | 2 | 58 | 407 | 47 | 393 | 1.11e-151 | 435 |
| Msa1208550 | AT5G15110.1 | 57.183 | 355 | 151 | 1 | 54 | 407 | 118 | 472 | 2.36e-149 | 432 |
| Msa1208550 | AT3G01270.1 | 56.338 | 355 | 154 | 1 | 54 | 407 | 121 | 475 | 1.00e-147 | 428 |
| Msa1208550 | AT1G30350.1 | 53.234 | 402 | 152 | 8 | 7 | 407 | 2 | 368 | 1.51e-138 | 400 |
| Msa1208550 | AT5G09280.1 | 48.062 | 258 | 131 | 3 | 91 | 347 | 6 | 261 | 9.29e-77 | 240 |
| Msa1208550 | AT3G55140.1 | 38.127 | 299 | 157 | 8 | 77 | 374 | 16 | 287 | 2.04e-48 | 168 |
| Msa1208550 | AT3G09540.1 | 37.801 | 291 | 149 | 9 | 75 | 361 | 61 | 323 | 1.30e-42 | 154 |
| Msa1208550 | AT3G09540.3 | 37.457 | 291 | 146 | 10 | 75 | 361 | 61 | 319 | 1.59e-40 | 148 |
| Msa1208550 | AT3G55140.2 | 37.121 | 264 | 143 | 7 | 112 | 374 | 22 | 263 | 3.45e-40 | 145 |
| Msa1208550 | AT3G09540.2 | 35.772 | 246 | 132 | 6 | 75 | 319 | 61 | 281 | 2.40e-35 | 132 |
Find 126 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTAGTTGTTAATCTCTT+TGG | 0.204884 | 8_1:+66704853 | Msa1208550:three_prime_UTR |
| AATTAATTAATTATAGAATA+TGG | 0.215022 | 8_1:+66704708 | Msa1208550:three_prime_UTR |
| GTTTGGTTTGGTCATTTCTT+TGG | 0.215949 | 8_1:+66704730 | Msa1208550:three_prime_UTR |
| CATCCTTTCCATTCACCTTC+TGG | 0.229620 | 8_1:-66704389 | None:intergenic |
| GAGATCAGAAGGGGATTTAT+TGG | 0.252599 | 8_1:+66704418 | Msa1208550:CDS |
| GAAGGGGATTTATTGGTAAA+TGG | 0.271139 | 8_1:+66704425 | Msa1208550:CDS |
| CCATGATAAAGTTATGCTTT+TGG | 0.272991 | 8_1:+66703648 | Msa1208550:CDS |
| ACTTCTTGTGTAACCAAATC+AGG | 0.275225 | 8_1:-66702779 | None:intergenic |
| AGGGACTCCCCAGGACATTA+TGG | 0.275653 | 8_1:+66703472 | Msa1208550:CDS |
| AAGGAAGAAGAGTGAGGAAT+TGG | 0.298645 | 8_1:-66702708 | None:intergenic |
| ATCTACGTCGTAACAGATTC+TGG | 0.307127 | 8_1:+66703187 | Msa1208550:CDS |
| AATTCATTCAAGACCATTGA+TGG | 0.310571 | 8_1:+66703331 | Msa1208550:CDS |
| TGATTCAAGACGAACCATTA+TGG | 0.319794 | 8_1:+66703257 | Msa1208550:CDS |
| AAACGAAGTGTACCGGGTTT+TGG | 0.321507 | 8_1:-66703229 | None:intergenic |
| AGACTAGCAGATTGTGCAAT+TGG | 0.327645 | 8_1:+66703127 | Msa1208550:CDS |
| TGGTTACACAAGAAGTTAAC+AGG | 0.337713 | 8_1:+66702786 | Msa1208550:CDS |
| ACCTCTTCAAGACCCTGATT+TGG | 0.354799 | 8_1:+66702766 | Msa1208550:CDS |
| CACCTCCAACAATCATCAAT+TGG | 0.361226 | 8_1:-66703076 | None:intergenic |
| GGTGATGGTGTTTCAATCTT+TGG | 0.361315 | 8_1:+66703514 | Msa1208550:CDS |
| TCTGTTTCCTTGGCTATTGA+TGG | 0.363689 | 8_1:-66704134 | None:intergenic |
| CACTGGGAAATGTATGCTAT+TGG | 0.369377 | 8_1:+66704094 | Msa1208550:CDS |
| TCTTTGGTGGAAGTCATGTT+TGG | 0.372613 | 8_1:+66703530 | Msa1208550:CDS |
| CTTTGGTGGAAGTCATGTTT+GGG | 0.384354 | 8_1:+66703531 | Msa1208550:CDS |
| CTCTTTAGCTAGGAGAAACT+TGG | 0.387502 | 8_1:+66703027 | Msa1208550:CDS |
| GTCATGTTTAAGGTTGTAAA+GGG | 0.399072 | 8_1:-66702677 | None:intergenic |
| CTTGCAAAGATTATCCATAA+TGG | 0.404999 | 8_1:-66703271 | None:intergenic |
| TTATAGAATATGGTTTGGTT+TGG | 0.407768 | 8_1:+66704718 | Msa1208550:three_prime_UTR |
| GGTTTGATTGATGCTATTCA+TGG | 0.410643 | 8_1:+66703586 | Msa1208550:CDS |
| GTTGGAGGTGTGACCCAAAC+TGG | 0.411442 | 8_1:+66703089 | Msa1208550:CDS |
| GGAGCTAGTGTTCACATTGC+TGG | 0.411776 | 8_1:+66703358 | Msa1208550:CDS |
| CTCTTTGCTGAATCTGTCAT+CGG | 0.413264 | 8_1:-66704167 | None:intergenic |
| GTGAATGGAAAGGATGGAAT+TGG | 0.414525 | 8_1:+66704396 | Msa1208550:CDS |
| ATTAATTATAGAATATGGTT+TGG | 0.414962 | 8_1:+66704713 | Msa1208550:three_prime_UTR |
| TGTCATGTTTAAGGTTGTAA+AGG | 0.430838 | 8_1:-66702678 | None:intergenic |
| TTAATTCAAGGGAGGGAAGT+TGG | 0.436601 | 8_1:+66704636 | Msa1208550:three_prime_UTR |
| TTCTCCACCCATAATGTCCT+GGG | 0.438364 | 8_1:-66703480 | None:intergenic |
| TCTTTGCTGAATCTGTCATC+GGG | 0.444567 | 8_1:-66704166 | None:intergenic |
| GACTAGCAGATTGTGCAATT+GGG | 0.446577 | 8_1:+66703128 | Msa1208550:CDS |
| ACGACTGGTGCTGGTGTACT+TGG | 0.447068 | 8_1:+66704545 | Msa1208550:CDS |
| GTTCTCCACCCATAATGTCC+TGG | 0.462926 | 8_1:-66703481 | None:intergenic |
| GCAGATTGTGCAATTGGGTT+CGG | 0.464118 | 8_1:+66703133 | Msa1208550:CDS |
| GGGCTACAAATCTGTTTCCT+TGG | 0.465553 | 8_1:-66704144 | None:intergenic |
| GGGACTCCCCAGGACATTAT+GGG | 0.466397 | 8_1:+66703473 | Msa1208550:CDS |
| CAGGCTGGTCAATTAATTCA+AGG | 0.466623 | 8_1:+66704624 | Msa1208550:three_prime_UTR |
| GAAACCCAATTGATGATTGT+TGG | 0.470361 | 8_1:+66703071 | Msa1208550:CDS |
| TTTCCTTGGCTATTGATGGT+AGG | 0.471059 | 8_1:-66704130 | None:intergenic |
| GTTTGGTCATTTCTTTGGCT+AGG | 0.479126 | 8_1:+66704735 | Msa1208550:three_prime_UTR |
| AGATTCTGGTGACGACGATC+CGG | 0.480462 | 8_1:+66703201 | Msa1208550:CDS |
| ACCTCCAACAATCATCAATT+GGG | 0.481818 | 8_1:-66703075 | None:intergenic |
| TCTTTGTCTAACTGTAATGA+TGG | 0.487158 | 8_1:+66703565 | Msa1208550:CDS |
| TTAAGGTTGTAAAGGGAAGA+AGG | 0.490916 | 8_1:-66702670 | None:intergenic |
| GGTGTACTTGGTTGTAAGAA+AGG | 0.495383 | 8_1:+66704557 | Msa1208550:CDS |
| GATGCTCCTCCTGCTCCTGA+TGG | 0.498131 | 8_1:-66704461 | None:intergenic |
| TAAACAATGACTATACTCAC+TGG | 0.505124 | 8_1:+66704077 | Msa1208550:CDS |
| AGGATGCGCCAGAAGGTGAA+TGG | 0.512208 | 8_1:+66704381 | Msa1208550:CDS |
| TTCAAGACCATTGATGGAAG+AGG | 0.512334 | 8_1:+66703337 | Msa1208550:CDS |
| GGGTACCTCTCATGTGGAAG+TGG | 0.513126 | 8_1:+66703049 | Msa1208550:CDS |
| GAGACAGTTGTTTGCTCGAG+GGG | 0.513260 | 8_1:-66704599 | None:intergenic |
| CAGAGACAGTTGTTTGCTCG+AGG | 0.519988 | 8_1:-66704601 | None:intergenic |
| ACTAGCTCCTCTTCCATCAA+TGG | 0.520452 | 8_1:-66703344 | None:intergenic |
| GGATGGAATTGGAGATCAGA+AGG | 0.522837 | 8_1:+66704407 | Msa1208550:CDS |
| AAATCAATGGCTCTTTAGCT+AGG | 0.524502 | 8_1:+66703017 | Msa1208550:CDS |
| TGGGAAATGTATGCTATTGG+AGG | 0.524720 | 8_1:+66704097 | Msa1208550:CDS |
| GAGCAAACAACTGTCTCTGC+AGG | 0.526167 | 8_1:+66704605 | Msa1208550:three_prime_UTR |
| CCAAAAGCATAACTTTATCA+TGG | 0.527550 | 8_1:-66703648 | None:intergenic |
| CACGGCGAAACGAAGTGTAC+CGG | 0.528458 | 8_1:-66703236 | None:intergenic |
| CATATACATGATTGTAAACA+AGG | 0.532097 | 8_1:+66703433 | Msa1208550:CDS |
| GCAAGACCATCTTCTCTAGT+TGG | 0.537015 | 8_1:+66704515 | Msa1208550:CDS |
| GTTTGATTGATGCTATTCAT+GGG | 0.537333 | 8_1:+66703587 | Msa1208550:CDS |
| CCAAAGAGATTAACAACTAG+AGG | 0.538229 | 8_1:-66704853 | None:intergenic |
| TAATGGTTCGTCTTGAATCA+CGG | 0.543141 | 8_1:-66703254 | None:intergenic |
| TCTTTAGCTAGGAGAAACTT+GGG | 0.545580 | 8_1:+66703028 | Msa1208550:CDS |
| ATTGTACCAACTAGAGAAGA+TGG | 0.548453 | 8_1:-66704521 | None:intergenic |
| AGAGACAGTTGTTTGCTCGA+GGG | 0.550545 | 8_1:-66704600 | None:intergenic |
| GGGTTCGGTAAGAATGCCAT+TGG | 0.551684 | 8_1:+66703148 | Msa1208550:CDS |
| AGAGAGAAGGAAGAAGAGTG+AGG | 0.555094 | 8_1:-66702714 | None:intergenic |
| ACATACTGAATTGTAATACA+TGG | 0.557374 | 8_1:-66703385 | None:intergenic |
| AAACAACTGTCTCTGCAGGC+TGG | 0.561868 | 8_1:+66704609 | Msa1208550:three_prime_UTR |
| GTTAGAGATGGTAATTGCAG+TGG | 0.564291 | 8_1:-66703611 | None:intergenic |
| CTTCTTGTGTAACCAAATCA+GGG | 0.566684 | 8_1:-66702778 | None:intergenic |
| TTCGGTAAGAATGCCATTGG+TGG | 0.570130 | 8_1:+66703151 | Msa1208550:CDS |
| GTGACTAATGTTATAATACA+TGG | 0.574654 | 8_1:+66703406 | Msa1208550:CDS |
| TGGTGGAAGTCATGTTTGGG+TGG | 0.575416 | 8_1:+66703534 | Msa1208550:CDS |
| TACATGATTGTAAACAAGGT+GGG | 0.575537 | 8_1:+66703437 | Msa1208550:CDS |
| AGTCATATAATTGTTAGAGA+TGG | 0.575991 | 8_1:-66703623 | None:intergenic |
| GATGGTGTTTCAATCTTTGG+TGG | 0.582213 | 8_1:+66703517 | Msa1208550:CDS |
| AGGTGGGAATGCCATGGTGA+GGG | 0.586721 | 8_1:+66703453 | Msa1208550:CDS |
| ACCTTGGCATTCTTTGAACA+AGG | 0.589280 | 8_1:-66703741 | None:intergenic |
| GGTTTCCACTTCCACATGAG+AGG | 0.590368 | 8_1:-66703054 | None:intergenic |
| AAACAATGACTATACTCACT+GGG | 0.594536 | 8_1:+66704078 | Msa1208550:CDS |
| GGTACAATAACGACTGGTGC+TGG | 0.596299 | 8_1:+66704536 | Msa1208550:CDS |
| GATGGAATTGGAGATCAGAA+GGG | 0.598901 | 8_1:+66704408 | Msa1208550:CDS |
| CGATGACAGATTCAGCAAAG+AGG | 0.599514 | 8_1:+66704168 | Msa1208550:CDS |
| ATGGTTTGCAGGTGTAGGCA+TGG | 0.600072 | 8_1:+66704040 | Msa1208550:intron |
| CTAGTTGGTACAATAACGAC+TGG | 0.602596 | 8_1:+66704530 | Msa1208550:CDS |
| GCTAGTGTTCACATTGCTGG+TGG | 0.603604 | 8_1:+66703361 | Msa1208550:CDS |
| AATCCTACCATCAATAGCCA+AGG | 0.603716 | 8_1:+66704127 | Msa1208550:CDS |
| ATGGAATTGGAGATCAGAAG+GGG | 0.604249 | 8_1:+66704409 | Msa1208550:CDS |
| TTTACACCATCAGGAGCAGG+AGG | 0.609904 | 8_1:+66704455 | Msa1208550:CDS |
| ACGGCGAAACGAAGTGTACC+GGG | 0.611780 | 8_1:-66703235 | None:intergenic |
| CAGAAGGTGAATGGAAAGGA+TGG | 0.613208 | 8_1:+66704390 | Msa1208550:CDS |
| ACCCAATTGATGATTGTTGG+AGG | 0.614236 | 8_1:+66703074 | Msa1208550:CDS |
| TGGTCAATTAATTCAAGGGA+GGG | 0.614509 | 8_1:+66704629 | Msa1208550:three_prime_UTR |
| AGGCTGGTCAATTAATTCAA+GGG | 0.615208 | 8_1:+66704625 | Msa1208550:three_prime_UTR |
| AGGGTCTTGAAGAGGTGAAG+AGG | 0.616881 | 8_1:-66702759 | None:intergenic |
| ACCAAATCAGGGTCTTGAAG+AGG | 0.622034 | 8_1:-66702767 | None:intergenic |
| AACTTGGGGTACCTCTCATG+TGG | 0.622347 | 8_1:+66703043 | Msa1208550:CDS |
| CTTTGCTGAATCTGTCATCG+GGG | 0.624770 | 8_1:-66704165 | None:intergenic |
| GCGCCAGAAGGTGAATGGAA+AGG | 0.624970 | 8_1:+66704386 | Msa1208550:CDS |
| AAGCACGAGGATGCGCCAGA+AGG | 0.627072 | 8_1:+66704374 | Msa1208550:CDS |
| AAGGTGGGAATGCCATGGTG+AGG | 0.634971 | 8_1:+66703452 | Msa1208550:CDS |
| ATTGTAGGAAGAAAGTAACA+TGG | 0.636622 | 8_1:-66704775 | None:intergenic |
| CTGGTCAATTAATTCAAGGG+AGG | 0.645239 | 8_1:+66704628 | Msa1208550:three_prime_UTR |
| GATCCGGTGACACCAAAACC+CGG | 0.648661 | 8_1:+66703217 | Msa1208550:CDS |
| AGAACAGTATCAGACGGTGA+TGG | 0.653341 | 8_1:+66703499 | Msa1208550:CDS |
| TCTCCACCCATAATGTCCTG+GGG | 0.654071 | 8_1:-66703479 | None:intergenic |
| GATAATCTTTGCAAGAGACA+TGG | 0.658003 | 8_1:+66703279 | Msa1208550:CDS |
| ACTCCCCAGGACATTATGGG+TGG | 0.660040 | 8_1:+66703476 | Msa1208550:CDS |
| TTGGAGGTGTGACCCAAACT+GGG | 0.660140 | 8_1:+66703090 | Msa1208550:CDS |
| TCCTGGGGAGTCCCTCACCA+TGG | 0.666445 | 8_1:-66703464 | None:intergenic |
| TTTGCTGAATCTGTCATCGG+GGG | 0.676835 | 8_1:-66704164 | None:intergenic |
| GGGTGGAGAACAGTATCAGA+CGG | 0.677252 | 8_1:+66703493 | Msa1208550:CDS |
| ATACATGATTGTAAACAAGG+TGG | 0.686460 | 8_1:+66703436 | Msa1208550:CDS |
| CTTTAGCTAGGAGAAACTTG+GGG | 0.690368 | 8_1:+66703029 | Msa1208550:CDS |
| TAAACAAGGTGGGAATGCCA+TGG | 0.700137 | 8_1:+66703447 | Msa1208550:CDS |
| GCCTTGTTCAAAGAATGCCA+AGG | 0.701595 | 8_1:+66703740 | Msa1208550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTATATAAAAAAATAA+GGG | + | chr8_1:66705649-66705668 | Msa1208550:intron | 0.0% |
| !!! | TTTTACAAGAAAAAATAATA+GGG | - | chr8_1:66702844-66702863 | None:intergenic | 10.0% |
| !!! | TTTTTACAAGAAAAAATAAT+AGG | - | chr8_1:66702845-66702864 | None:intergenic | 10.0% |
| !! | AAAAAAAGAAAAAAGATAAA+CGG | + | chr8_1:66703846-66703865 | Msa1208550:intron | 10.0% |
| !! | ATAAAAAAAAAACAATAAAG+TGG | - | chr8_1:66705009-66705028 | None:intergenic | 10.0% |
| !!! | TTTGAAATTAAATGTAATAT+AGG | + | chr8_1:66705123-66705142 | Msa1208550:intron | 10.0% |
| !! | TTGAAATTAAATGTAATATA+GGG | + | chr8_1:66705124-66705143 | Msa1208550:intron | 10.0% |
| !!! | AAAATCTATAAATGTTTTTT+AGG | + | chr8_1:66705166-66705185 | Msa1208550:intron | 10.0% |
| !! | AAAATTACAAAAATTATACT+GGG | - | chr8_1:66705208-66705227 | None:intergenic | 10.0% |
| !! | AAAAATTACAAAAATTATAC+TGG | - | chr8_1:66705209-66705228 | None:intergenic | 10.0% |
| !!! | AAAAATAATTTTTTTGACAA+TGG | - | chr8_1:66705411-66705430 | None:intergenic | 10.0% |
| !! | AAATATATTAACGTATTATA+TGG | - | chr8_1:66705469-66705488 | None:intergenic | 10.0% |
| !! | ATATAAACAATCTAATTAAT+GGG | - | chr8_1:66705854-66705873 | None:intergenic | 10.0% |
| !! | AAAAAGACTATTAAAATTAA+GGG | - | chr8_1:66707107-66707126 | None:intergenic | 10.0% |
| !! | TAAAAAGACTATTAAAATTA+AGG | - | chr8_1:66707108-66707127 | None:intergenic | 10.0% |
| !!! | AAAATCTATAAATGTTTTTT+AGG | - | chr8_1:66705166-66705185 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAACTAAAAAG+TGG | + | chr8_1:66707807-66707826 | Msa1208550:intron | 10.0% |
| !!! | TTTTTGTTTATAATACTAGA+GGG | - | chr8_1:66702924-66702943 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTTATAATACTAG+AGG | - | chr8_1:66702925-66702944 | None:intergenic | 15.0% |
| !!! | GTTTATCTTTTTTCTTTTTT+TGG | - | chr8_1:66703847-66703866 | None:intergenic | 15.0% |
| !! | AAAAAAGAAAAAAGATAAAC+GGG | + | chr8_1:66703847-66703866 | Msa1208550:intron | 15.0% |
| !! | ATTAATTATAGAATATGGTT+TGG | + | chr8_1:66704713-66704732 | Msa1208550:three_prime_UTR | 15.0% |
| !! | AATCCAAAAATAAAAATTGT+AGG | - | chr8_1:66704793-66704812 | None:intergenic | 15.0% |
| !! | AAAATTATTGATATTCGTAT+TGG | + | chr8_1:66704937-66704956 | Msa1208550:intron | 15.0% |
| !! | CAAATATAGAAAAAACTTAT+TGG | + | chr8_1:66705711-66705730 | Msa1208550:intron | 15.0% |
| !!! | TAAACAATATTTCTTCTTTT+AGG | + | chr8_1:66705790-66705809 | Msa1208550:intron | 15.0% |
| !! | GATATAAACAATCTAATTAA+TGG | - | chr8_1:66705855-66705874 | None:intergenic | 15.0% |
| !! | TACAAAAATTTCTTAAATAG+TGG | + | chr8_1:66705952-66705971 | Msa1208550:intron | 15.0% |
| !! | AAAAGACTATTAAAATTAAG+GGG | - | chr8_1:66707106-66707125 | None:intergenic | 15.0% |
| !!! | ATAAGTAACTTTATTTTGTA+TGG | - | chr8_1:66707133-66707152 | None:intergenic | 15.0% |
| !!! | AATTTTGCAATAATTTTTCA+TGG | + | chr8_1:66707358-66707377 | Msa1208550:intron | 15.0% |
| !!! | TTTTGATCCTTATAAAATTA+GGG | - | chr8_1:66707554-66707573 | None:intergenic | 15.0% |
| !!! | TTTTTGATCCTTATAAAATT+AGG | - | chr8_1:66707555-66707574 | None:intergenic | 15.0% |
| !! | TTGAAATTAAATGTAGTAAA+GGG | - | chr8_1:66707691-66707710 | None:intergenic | 15.0% |
| !!! | TTTGAAATTAAATGTAGTAA+AGG | - | chr8_1:66707692-66707711 | None:intergenic | 15.0% |
| !! | ACAAAAATGTACATGTATTT+AGG | + | chr8_1:66702937-66702956 | Msa1208550:intron | 20.0% |
| !!! | CTTTTTTCTTTTTTTGGTAA+TGG | - | chr8_1:66703841-66703860 | None:intergenic | 20.0% |
| !! | AATTAGAAAAACATATGTGA+TGG | + | chr8_1:66704021-66704040 | Msa1208550:intron | 20.0% |
| !!! | AGACGTTGAATTATTATTTT+AGG | + | chr8_1:66704346-66704365 | Msa1208550:intron | 20.0% |
| !!! | CTTCCTACAATTTTTATTTT+TGG | + | chr8_1:66704787-66704806 | Msa1208550:three_prime_UTR | 20.0% |
| !!! | TGATAGTAATAGATTTTTTG+CGG | + | chr8_1:66705574-66705593 | Msa1208550:intron | 20.0% |
| !! | ATTAGAAAATCTAGTTAACA+TGG | + | chr8_1:66706130-66706149 | Msa1208550:intron | 20.0% |
| !! | TTATATTTGATATCGTTAGT+CGG | - | chr8_1:66706555-66706574 | None:intergenic | 20.0% |
| !!! | AAAATTTCCATCAACATTTT+TGG | + | chr8_1:66706819-66706838 | Msa1208550:intron | 20.0% |
| !!! | CATTTTCCTTAAGTATTTTA+GGG | - | chr8_1:66706846-66706865 | None:intergenic | 20.0% |
| !!! | ACATTTTCCTTAAGTATTTT+AGG | - | chr8_1:66706847-66706866 | None:intergenic | 20.0% |
| !! | ACAAAACTGTGAATATTTAT+AGG | + | chr8_1:66706910-66706929 | Msa1208550:intron | 20.0% |
| !! | CAAAACTGTGAATATTTATA+GGG | + | chr8_1:66706911-66706930 | Msa1208550:intron | 20.0% |
| !! | AAACAAAAATTGTCTTATCA+GGG | - | chr8_1:66707165-66707184 | None:intergenic | 20.0% |
| !! | TTCAAAAATTTAAGAGTTTG+AGG | - | chr8_1:66707194-66707213 | None:intergenic | 20.0% |
| !!! | TAAAATGCCCTAATTTTATA+AGG | + | chr8_1:66707544-66707563 | Msa1208550:intron | 20.0% |
| !!! | TTCTTCGTTTATTTTAGTTT+GGG | - | chr8_1:66707587-66707606 | None:intergenic | 20.0% |
| !!! | TTTCTTCGTTTATTTTAGTT+TGG | - | chr8_1:66707588-66707607 | None:intergenic | 20.0% |
| ! | ATTTGTATGTTAAGCTAGTT+TGG | - | chr8_1:66702815-66702834 | None:intergenic | 25.0% |
| !!! | ATAGTAAAGTATTTTTCTGC+AGG | + | chr8_1:66702993-66703012 | Msa1208550:intron | 25.0% |
| ! | ACATACTGAATTGTAATACA+TGG | - | chr8_1:66703388-66703407 | None:intergenic | 25.0% |
| ! | GTGACTAATGTTATAATACA+TGG | + | chr8_1:66703406-66703425 | Msa1208550:CDS | 25.0% |
| ! | CATATACATGATTGTAAACA+AGG | + | chr8_1:66703433-66703452 | Msa1208550:CDS | 25.0% |
| ! | AGTCATATAATTGTTAGAGA+TGG | - | chr8_1:66703626-66703645 | None:intergenic | 25.0% |
| !! | CATGATAAAGTTATGCTTTT+GGG | + | chr8_1:66703649-66703668 | Msa1208550:CDS | 25.0% |
| !!! | ACTATTGCTTTTAATCACTT+TGG | + | chr8_1:66703712-66703731 | Msa1208550:CDS | 25.0% |
| ! | AAAGTAGTATATGATTACCT+TGG | - | chr8_1:66703760-66703779 | None:intergenic | 25.0% |
| ! | ATTAGTGTCTTCAGTATATA+TGG | + | chr8_1:66703972-66703991 | Msa1208550:intron | 25.0% |
| ! | TTAGTGTCTTCAGTATATAT+GGG | + | chr8_1:66703973-66703992 | Msa1208550:intron | 25.0% |
| !! | AATGCATCGAATGATTTTAA+CGG | + | chr8_1:66704236-66704255 | Msa1208550:intron | 25.0% |
| !!! | TTATAGAATATGGTTTGGTT+TGG | + | chr8_1:66704718-66704737 | Msa1208550:three_prime_UTR | 25.0% |
| !!! | TCAATTGCATACATTTTAGT+AGG | - | chr8_1:66705102-66705121 | None:intergenic | 25.0% |
| !!! | AAATGTAATATAGGGTGTTT+TGG | + | chr8_1:66705132-66705151 | Msa1208550:intron | 25.0% |
| !! | AAATGTCGTATATGATGTTT+TGG | + | chr8_1:66705288-66705307 | Msa1208550:intron | 25.0% |
| !! | AATGTCGTATATGATGTTTT+GGG | + | chr8_1:66705289-66705308 | Msa1208550:intron | 25.0% |
| ! | AAAATTACACTGGGAAAAAA+TGG | - | chr8_1:66705349-66705368 | None:intergenic | 25.0% |
| !!! | TTTTTTCCCAGTGTAATTTT+TGG | + | chr8_1:66705349-66705368 | Msa1208550:intron | 25.0% |
| ! | AGAATTCCAAAAATTACACT+GGG | - | chr8_1:66705358-66705377 | None:intergenic | 25.0% |
| ! | AAGAATTCCAAAAATTACAC+TGG | - | chr8_1:66705359-66705378 | None:intergenic | 25.0% |
| ! | ATGGTTAATAAGAGTCAAAA+TGG | - | chr8_1:66705450-66705469 | None:intergenic | 25.0% |
| ! | AAGCAAATAAAATCCGTAAT+TGG | - | chr8_1:66705985-66706004 | None:intergenic | 25.0% |
| ! | TATATGAGTAAGTTGCTTAT+TGG | + | chr8_1:66706034-66706053 | Msa1208550:intron | 25.0% |
| !!! | GATTTTCAAAACTTTAGTTC+CGG | - | chr8_1:66706073-66706092 | None:intergenic | 25.0% |
| !!! | GGAACTAAAGTTTTGAAAAT+CGG | + | chr8_1:66706072-66706091 | Msa1208550:intron | 25.0% |
| ! | TCAATTAAGGTCATATTCAA+CGG | - | chr8_1:66706222-66706241 | None:intergenic | 25.0% |
| ! | TAAACTAGAATTTCAGCAAT+CGG | + | chr8_1:66706256-66706275 | Msa1208550:intron | 25.0% |
| ! | AAAAACCTAGTCAATATGAA+AGG | + | chr8_1:66706317-66706336 | Msa1208550:intron | 25.0% |
| ! | TCAATTATGGTCATATTCAA+TGG | - | chr8_1:66706405-66706424 | None:intergenic | 25.0% |
| !! | CGAAGTATGAACTAAAATTT+TGG | + | chr8_1:66706432-66706451 | Msa1208550:intron | 25.0% |
| !!! | TGTTGATGGAAATTTTTGAT+GGG | - | chr8_1:66706815-66706834 | None:intergenic | 25.0% |
| !!! | ATGTTGATGGAAATTTTTGA+TGG | - | chr8_1:66706816-66706835 | None:intergenic | 25.0% |
| !! | AAAGTGTGATTTCATTTTGT+AGG | + | chr8_1:66706879-66706898 | Msa1208550:intron | 25.0% |
| !! | AAGTGTGATTTCATTTTGTA+GGG | + | chr8_1:66706880-66706899 | Msa1208550:intron | 25.0% |
| ! | CAAACAAAAATTGTCTTATC+AGG | - | chr8_1:66707166-66707185 | None:intergenic | 25.0% |
| !! | CAAGTTTAAAACACTATGAA+AGG | + | chr8_1:66707228-66707247 | Msa1208550:intron | 25.0% |
| ! | TAAGCAAATTTGAATTGAGT+AGG | + | chr8_1:66707452-66707471 | Msa1208550:intron | 25.0% |
| !!! | TGAGTGCAAAATCTTTTTTT+AGG | + | chr8_1:66707484-66707503 | Msa1208550:intron | 25.0% |
| !!! | GAGTGCAAAATCTTTTTTTA+GGG | + | chr8_1:66707485-66707504 | Msa1208550:intron | 25.0% |
| ! | GTCATGTTTAAGGTTGTAAA+GGG | - | chr8_1:66702680-66702699 | None:intergenic | 30.0% |
| ! | TGTCATGTTTAAGGTTGTAA+AGG | - | chr8_1:66702681-66702700 | None:intergenic | 30.0% |
| !!! | GGTTTTAGTTGTCATGTTTA+AGG | - | chr8_1:66702690-66702709 | None:intergenic | 30.0% |
| ! | TTTTTCTGCAGGAAAATCAA+TGG | + | chr8_1:66703004-66703023 | Msa1208550:intron | 30.0% |
| !! | TTTACCATTTTTACCACCAA+TGG | - | chr8_1:66703167-66703186 | None:intergenic | 30.0% |
| CTTGCAAAGATTATCCATAA+TGG | - | chr8_1:66703274-66703293 | None:intergenic | 30.0% | |
| AATTCATTCAAGACCATTGA+TGG | + | chr8_1:66703331-66703350 | Msa1208550:CDS | 30.0% | |
| ATACATGATTGTAAACAAGG+TGG | + | chr8_1:66703436-66703455 | Msa1208550:CDS | 30.0% | |
| TACATGATTGTAAACAAGGT+GGG | + | chr8_1:66703437-66703456 | Msa1208550:CDS | 30.0% | |
| TCTTTGTCTAACTGTAATGA+TGG | + | chr8_1:66703565-66703584 | Msa1208550:CDS | 30.0% | |
| GTTTGATTGATGCTATTCAT+GGG | + | chr8_1:66703587-66703606 | Msa1208550:CDS | 30.0% | |
| ! | CCAAAAGCATAACTTTATCA+TGG | - | chr8_1:66703651-66703670 | None:intergenic | 30.0% |
| ! | CCATGATAAAGTTATGCTTT+TGG | + | chr8_1:66703648-66703667 | Msa1208550:CDS | 30.0% |
| ! | ATAAACGGGTTTATGAAAAG+TGG | + | chr8_1:66703861-66703880 | Msa1208550:intron | 30.0% |
| ! | TAAACGGGTTTATGAAAAGT+GGG | + | chr8_1:66703862-66703881 | Msa1208550:intron | 30.0% |
| GTTTATGAAAAGTGGGAAAA+GGG | + | chr8_1:66703869-66703888 | Msa1208550:intron | 30.0% | |
| TTTATGAAAAGTGGGAAAAG+GGG | + | chr8_1:66703870-66703889 | Msa1208550:intron | 30.0% | |
| AGTGTAGAAATCAATGTGTA+TGG | + | chr8_1:66703915-66703934 | Msa1208550:intron | 30.0% | |
| GTGTAGAAATCAATGTGTAT+GGG | + | chr8_1:66703916-66703935 | Msa1208550:intron | 30.0% | |
| TAGTGTCTTCAGTATATATG+GGG | + | chr8_1:66703974-66703993 | Msa1208550:intron | 30.0% | |
| TAAACAATGACTATACTCAC+TGG | + | chr8_1:66704077-66704096 | Msa1208550:CDS | 30.0% | |
| AAACAATGACTATACTCACT+GGG | + | chr8_1:66704078-66704097 | Msa1208550:CDS | 30.0% | |
| ATTGTAGGAAGAAAGTAACA+TGG | - | chr8_1:66704778-66704797 | None:intergenic | 30.0% | |
| AACAATAAAGTGGTCATGTA+TGG | - | chr8_1:66704999-66705018 | None:intergenic | 30.0% | |
| ACTAATCCAATGGCTATAAT+TGG | - | chr8_1:66707775-66707794 | None:intergenic | 30.0% | |
| ! | TTAGTTTGAAAGGCAATAGA+TGG | + | chr8_1:66705054-66705073 | Msa1208550:intron | 30.0% |
| ATACTGGGCAAAAACAAAAA+CGG | - | chr8_1:66705193-66705212 | None:intergenic | 30.0% | |
| TATTGGAATATAAACGAAGC+CGG | + | chr8_1:66706051-66706070 | Msa1208550:intron | 30.0% | |
| !!! | GTTTTGAAAATCGGAATCTT+AGG | + | chr8_1:66706081-66706100 | Msa1208550:intron | 30.0% |
| TTATATTTGACACCGTTAGT+CGG | - | chr8_1:66706190-66706209 | None:intergenic | 30.0% | |
| ACTTCGTTCTTGTTCAATTA+AGG | - | chr8_1:66706235-66706254 | None:intergenic | 30.0% | |
| ! | AATGTCCTTTCATATTGACT+AGG | - | chr8_1:66706325-66706344 | None:intergenic | 30.0% |
| TTATGGTCATATTCAATGGT+CGG | - | chr8_1:66706401-66706420 | None:intergenic | 30.0% | |
| ACTTCGTTCTTGTTCAATTA+TGG | - | chr8_1:66706235-66706254 | None:intergenic | 30.0% | |
| TCCAATAAGGTCATATTCAA+CGG | - | chr8_1:66706587-66706606 | None:intergenic | 30.0% | |
| ACTTCGTTCTTATTCCAATA+AGG | - | chr8_1:66706600-66706619 | None:intergenic | 30.0% | |
| TATTGGAATAAGAACGAAGT+AGG | + | chr8_1:66706600-66706619 | Msa1208550:intron | 30.0% | |
| CGAAGTAGGAATTGAAATTT+CGG | + | chr8_1:66706614-66706633 | Msa1208550:intron | 30.0% | |
| AAGTTGACTAGGTTTCTAAT+GGG | - | chr8_1:66706679-66706698 | None:intergenic | 30.0% | |
| AAAGTTGACTAGGTTTCTAA+TGG | - | chr8_1:66706680-66706699 | None:intergenic | 30.0% | |
| AATATGCTTCAAAGTTGACT+AGG | - | chr8_1:66706690-66706709 | None:intergenic | 30.0% | |
| ! | TTTGAAGCATATTACTCTGA+CGG | + | chr8_1:66706697-66706716 | Msa1208550:intron | 30.0% |
| AATATGAAAAACTATCCCGT+TGG | - | chr8_1:66706752-66706771 | None:intergenic | 30.0% | |
| ! | CGGGATAGTTTTTCATATTT+TGG | + | chr8_1:66706753-66706772 | Msa1208550:intron | 30.0% |
| !! | GTTTTGGCAATTAGAATCTT+CGG | - | chr8_1:66706785-66706804 | None:intergenic | 30.0% |
| ! | TTTGATGGGAACTAAAGTTT+TGG | - | chr8_1:66706801-66706820 | None:intergenic | 30.0% |
| TTTGGTCCCTAAAATACTTA+AGG | + | chr8_1:66706837-66706856 | Msa1208550:intron | 30.0% | |
| ACAATTTAATTGTGGAGAAG+TGG | - | chr8_1:66707028-66707047 | None:intergenic | 30.0% | |
| AATCTGGGCAACAATAAAAA+CGG | + | chr8_1:66707622-66707641 | Msa1208550:intron | 30.0% | |
| !!! | AAATGTAGTAAAGGGTGTTT+TGG | - | chr8_1:66707683-66707702 | None:intergenic | 30.0% |
| !! | TCAATTGCATACATTTTAGC+AGG | + | chr8_1:66707713-66707732 | Msa1208550:intron | 30.0% |
| ! | TTAGTTTGAAAGGCAATAGA+TGG | - | chr8_1:66705054-66705073 | None:intergenic | 30.0% |
| ACTAATCCAATGGCTATAAT+TGG | + | chr8_1:66707775-66707794 | Msa1208550:intron | 30.0% | |
| AACTAAAAAGTGGTCATGTA+TGG | + | chr8_1:66707817-66707836 | Msa1208550:intron | 30.0% | |
| ACATGTAATACCAATACCAA+TGG | - | chr8_1:66707879-66707898 | None:intergenic | 30.0% | |
| TTAAGGTTGTAAAGGGAAGA+AGG | - | chr8_1:66702673-66702692 | None:intergenic | 35.0% | |
| AGGAAATGAGAGAAAAAGTG+AGG | - | chr8_1:66702742-66702761 | None:intergenic | 35.0% | |
| CTTCTTGTGTAACCAAATCA+GGG | - | chr8_1:66702781-66702800 | None:intergenic | 35.0% | |
| ACTTCTTGTGTAACCAAATC+AGG | - | chr8_1:66702782-66702801 | None:intergenic | 35.0% | |
| TGGTTACACAAGAAGTTAAC+AGG | + | chr8_1:66702786-66702805 | Msa1208550:CDS | 35.0% | |
| AAATCAATGGCTCTTTAGCT+AGG | + | chr8_1:66703017-66703036 | Msa1208550:CDS | 35.0% | |
| TCTTTAGCTAGGAGAAACTT+GGG | + | chr8_1:66703028-66703047 | Msa1208550:CDS | 35.0% | |
| ! | GAAACCCAATTGATGATTGT+TGG | + | chr8_1:66703071-66703090 | Msa1208550:CDS | 35.0% |
| ACCTCCAACAATCATCAATT+GGG | - | chr8_1:66703078-66703097 | None:intergenic | 35.0% | |
| !!! | GTCTGTTTTTTTCCCAGTTT+GGG | - | chr8_1:66703105-66703124 | None:intergenic | 35.0% |
| !!! | TGTCTGTTTTTTTCCCAGTT+TGG | - | chr8_1:66703106-66703125 | None:intergenic | 35.0% |
| ! | AATGCCATTGGTGGTAAAAA+TGG | + | chr8_1:66703160-66703179 | Msa1208550:CDS | 35.0% |
| TAATGGTTCGTCTTGAATCA+CGG | - | chr8_1:66703257-66703276 | None:intergenic | 35.0% | |
| TGATTCAAGACGAACCATTA+TGG | + | chr8_1:66703257-66703276 | Msa1208550:CDS | 35.0% | |
| GATAATCTTTGCAAGAGACA+TGG | + | chr8_1:66703279-66703298 | Msa1208550:CDS | 35.0% | |
| GGTTTGATTGATGCTATTCA+TGG | + | chr8_1:66703586-66703605 | Msa1208550:CDS | 35.0% | |
| ! | GCTTTTAATCACTTTGGTGA+AGG | + | chr8_1:66703718-66703737 | Msa1208550:CDS | 35.0% |
| GGTTTATGAAAAGTGGGAAA+AGG | + | chr8_1:66703868-66703887 | Msa1208550:intron | 35.0% | |
| TTATGAAAAGTGGGAAAAGG+GGG | + | chr8_1:66703871-66703890 | Msa1208550:intron | 35.0% | |
| ! | AAACATATGTGATGGTTTGC+AGG | + | chr8_1:66704029-66704048 | Msa1208550:intron | 35.0% |
| GAAGGGGATTTATTGGTAAA+TGG | + | chr8_1:66704425-66704444 | Msa1208550:CDS | 35.0% | |
| ATTGTACCAACTAGAGAAGA+TGG | - | chr8_1:66704524-66704543 | None:intergenic | 35.0% | |
| ! | AGGCTGGTCAATTAATTCAA+GGG | + | chr8_1:66704625-66704644 | Msa1208550:three_prime_UTR | 35.0% |
| TGGTCAATTAATTCAAGGGA+GGG | + | chr8_1:66704629-66704648 | Msa1208550:three_prime_UTR | 35.0% | |
| !! | GTTTGGTTTGGTCATTTCTT+TGG | + | chr8_1:66704730-66704749 | Msa1208550:three_prime_UTR | 35.0% |
| CCAAAGAGATTAACAACTAG+AGG | - | chr8_1:66704856-66704875 | None:intergenic | 35.0% | |
| CCTCTAGTTGTTAATCTCTT+TGG | + | chr8_1:66704853-66704872 | Msa1208550:three_prime_UTR | 35.0% | |
| ! | CTTCTGCAATTGTTTTCTCT+TGG | - | chr8_1:66704900-66704919 | None:intergenic | 35.0% |
| GCAAAACCAATTATAGCCAT+TGG | + | chr8_1:66705030-66705049 | Msa1208550:intron | 35.0% | |
| !! | AGCCATTGGATTAGTTTGAA+AGG | + | chr8_1:66705044-66705063 | Msa1208550:intron | 35.0% |
| TGCCTTTCAAACTAATCCAA+TGG | - | chr8_1:66707765-66707784 | None:intergenic | 35.0% | |
| AAGAAATGAGTGCTTTCACA+TGG | + | chr8_1:66705614-66705633 | Msa1208550:intron | 35.0% | |
| AGAAATGAGTGCTTTCACAT+GGG | + | chr8_1:66705615-66705634 | Msa1208550:intron | 35.0% | |
| !! | ATCATTAACTTGTGCCTTGA+GGG | - | chr8_1:66705690-66705709 | None:intergenic | 35.0% |
| !! | AATCATTAACTTGTGCCTTG+AGG | - | chr8_1:66705691-66705710 | None:intergenic | 35.0% |
| TTTCTTAACATGTGCCCTAA+GGG | + | chr8_1:66705813-66705832 | Msa1208550:intron | 35.0% | |
| TTAAGGTCATATTCAACGGT+CGG | - | chr8_1:66706218-66706237 | None:intergenic | 35.0% | |
| ! | GTGAGATTGACTTATATCGA+AGG | - | chr8_1:66706284-66706303 | None:intergenic | 35.0% |
| CATTCCTCTTACGATCAAAA+TGG | + | chr8_1:66706341-66706360 | Msa1208550:intron | 35.0% | |
| CATTAGAAACCTAGTCAACA+TGG | + | chr8_1:66706495-66706514 | Msa1208550:intron | 35.0% | |
| ATAAGGTCATATTCAACGGT+AGG | - | chr8_1:66706583-66706602 | None:intergenic | 35.0% | |
| ACCGTTGAATATGACCTTAT+TGG | + | chr8_1:66706583-66706602 | Msa1208550:intron | 35.0% | |
| ATTTCGGCAATCGAAATCTT+TGG | + | chr8_1:66706630-66706649 | Msa1208550:intron | 35.0% | |
| ! | AATGTCCTTACATGTTGACT+AGG | + | chr8_1:66706723-66706742 | Msa1208550:intron | 35.0% |
| TTAGGGACCAAAAATGTTGA+TGG | - | chr8_1:66706829-66706848 | None:intergenic | 35.0% | |
| ACATTGCATTCTACATGCAT+GGG | + | chr8_1:66706979-66706998 | Msa1208550:intron | 35.0% | |
| TGCCTTTCAAACTAATCCAA+TGG | + | chr8_1:66707765-66707784 | Msa1208550:intron | 35.0% | |
| !! | AGCCATTGGATTAGTTTGAA+AGG | - | chr8_1:66705044-66705063 | None:intergenic | 35.0% |
| AAGGAAGAAGAGTGAGGAAT+TGG | - | chr8_1:66702711-66702730 | None:intergenic | 40.0% | |
| AAAAAGTGAGGAGAGAGAGA+AGG | - | chr8_1:66702730-66702749 | None:intergenic | 40.0% | |
| CTCTTTAGCTAGGAGAAACT+TGG | + | chr8_1:66703027-66703046 | Msa1208550:CDS | 40.0% | |
| CTTTAGCTAGGAGAAACTTG+GGG | + | chr8_1:66703029-66703048 | Msa1208550:CDS | 40.0% | |
| ! | ACCCAATTGATGATTGTTGG+AGG | + | chr8_1:66703074-66703093 | Msa1208550:CDS | 40.0% |
| CACCTCCAACAATCATCAAT+TGG | - | chr8_1:66703079-66703098 | None:intergenic | 40.0% | |
| AGACTAGCAGATTGTGCAAT+TGG | + | chr8_1:66703127-66703146 | Msa1208550:CDS | 40.0% | |
| GACTAGCAGATTGTGCAATT+GGG | + | chr8_1:66703128-66703147 | Msa1208550:CDS | 40.0% | |
| ATCTACGTCGTAACAGATTC+TGG | + | chr8_1:66703187-66703206 | Msa1208550:CDS | 40.0% | |
| TTCAAGACCATTGATGGAAG+AGG | + | chr8_1:66703337-66703356 | Msa1208550:CDS | 40.0% | |
| ! | GGTGATGGTGTTTCAATCTT+TGG | + | chr8_1:66703514-66703533 | Msa1208550:CDS | 40.0% |
| GATGGTGTTTCAATCTTTGG+TGG | + | chr8_1:66703517-66703536 | Msa1208550:CDS | 40.0% | |
| TCTTTGGTGGAAGTCATGTT+TGG | + | chr8_1:66703530-66703549 | Msa1208550:CDS | 40.0% | |
| CTTTGGTGGAAGTCATGTTT+GGG | + | chr8_1:66703531-66703550 | Msa1208550:CDS | 40.0% | |
| GTTAGAGATGGTAATTGCAG+TGG | - | chr8_1:66703614-66703633 | None:intergenic | 40.0% | |
| ACCTTGGCATTCTTTGAACA+AGG | - | chr8_1:66703744-66703763 | None:intergenic | 40.0% | |
| GAAATCAATGTGTATGGGAG+TGG | + | chr8_1:66703921-66703940 | Msa1208550:intron | 40.0% | |
| !! | TAGGCATGGTTATTTTCACG+TGG | + | chr8_1:66704054-66704073 | Msa1208550:CDS | 40.0% |
| CACTGGGAAATGTATGCTAT+TGG | + | chr8_1:66704094-66704113 | Msa1208550:CDS | 40.0% | |
| TGGGAAATGTATGCTATTGG+AGG | + | chr8_1:66704097-66704116 | Msa1208550:CDS | 40.0% | |
| AATCCTACCATCAATAGCCA+AGG | + | chr8_1:66704127-66704146 | Msa1208550:CDS | 40.0% | |
| ! | TTTCCTTGGCTATTGATGGT+AGG | - | chr8_1:66704133-66704152 | None:intergenic | 40.0% |
| TCTGTTTCCTTGGCTATTGA+TGG | - | chr8_1:66704137-66704156 | None:intergenic | 40.0% | |
| TCTTTGCTGAATCTGTCATC+GGG | - | chr8_1:66704169-66704188 | None:intergenic | 40.0% | |
| CTCTTTGCTGAATCTGTCAT+CGG | - | chr8_1:66704170-66704189 | None:intergenic | 40.0% | |
| !! | ATTTTAGGTGACAAAGCACG+AGG | + | chr8_1:66704361-66704380 | Msa1208550:intron | 40.0% |
| GTGAATGGAAAGGATGGAAT+TGG | + | chr8_1:66704396-66704415 | Msa1208550:CDS | 40.0% | |
| GATGGAATTGGAGATCAGAA+GGG | + | chr8_1:66704408-66704427 | Msa1208550:CDS | 40.0% | |
| ATGGAATTGGAGATCAGAAG+GGG | + | chr8_1:66704409-66704428 | Msa1208550:CDS | 40.0% | |
| GAGATCAGAAGGGGATTTAT+TGG | + | chr8_1:66704418-66704437 | Msa1208550:CDS | 40.0% | |
| !!! | GGTGCATTTTTTACACCATC+AGG | + | chr8_1:66704446-66704465 | Msa1208550:CDS | 40.0% |
| !!! | TTTTTTACACCATCAGGAGC+AGG | + | chr8_1:66704452-66704471 | Msa1208550:CDS | 40.0% |
| ! | CTAGTTGGTACAATAACGAC+TGG | + | chr8_1:66704530-66704549 | Msa1208550:CDS | 40.0% |
| GGTGTACTTGGTTGTAAGAA+AGG | + | chr8_1:66704557-66704576 | Msa1208550:CDS | 40.0% | |
| ! | CAGGCTGGTCAATTAATTCA+AGG | + | chr8_1:66704624-66704643 | Msa1208550:three_prime_UTR | 40.0% |
| CTGGTCAATTAATTCAAGGG+AGG | + | chr8_1:66704628-66704647 | Msa1208550:three_prime_UTR | 40.0% | |
| TTAATTCAAGGGAGGGAAGT+TGG | + | chr8_1:66704636-66704655 | Msa1208550:three_prime_UTR | 40.0% | |
| GTTTGGTCATTTCTTTGGCT+AGG | + | chr8_1:66704735-66704754 | Msa1208550:three_prime_UTR | 40.0% | |
| ACACTGGGAAAAAATGGTCT+TGG | - | chr8_1:66705343-66705362 | None:intergenic | 40.0% | |
| !! | AATGTTAACTTGTGCCCTCA+AGG | + | chr8_1:66705673-66705692 | Msa1208550:intron | 40.0% |
| GTTTCTTAACATGTGCCCTA+AGG | + | chr8_1:66705812-66705831 | Msa1208550:intron | 40.0% | |
| AGTGTTATCTTGTGCCCTTA+GGG | - | chr8_1:66705830-66705849 | None:intergenic | 40.0% | |
| TAGTGTTATCTTGTGCCCTT+AGG | - | chr8_1:66705831-66705850 | None:intergenic | 40.0% | |
| TAGTGGAGTCACACCAATTA+CGG | + | chr8_1:66705969-66705988 | Msa1208550:intron | 40.0% | |
| CATTACTCCGACGATCAAAA+CGG | + | chr8_1:66706158-66706177 | Msa1208550:intron | 40.0% | |
| AGAAACCTAGTCAACATGGA+AGG | + | chr8_1:66706499-66706518 | Msa1208550:intron | 40.0% | |
| ! | AATGTCCTTCCATGTTGACT+AGG | - | chr8_1:66706507-66706526 | None:intergenic | 40.0% |
| !!! | TGCGTCTGTTTTGGTAATCA+AGG | - | chr8_1:66706531-66706550 | None:intergenic | 40.0% |
| GGAAACCTAGTCAACATGTA+AGG | - | chr8_1:66706731-66706750 | None:intergenic | 40.0% | |
| ! | CATGTTGACTAGGTTTCCAA+CGG | + | chr8_1:66706733-66706752 | Msa1208550:intron | 40.0% |
| ! | ATGTTGACTAGGTTTCCAAC+GGG | + | chr8_1:66706734-66706753 | Msa1208550:intron | 40.0% |
| GACATTGCATTCTACATGCA+TGG | + | chr8_1:66706978-66706997 | Msa1208550:intron | 40.0% | |
| GAGCTCGCACAATTTAATTG+TGG | - | chr8_1:66707036-66707055 | None:intergenic | 40.0% | |
| !! | ATTTTGGTCAAGTAGCCTAG+TGG | - | chr8_1:66707062-66707081 | None:intergenic | 40.0% |
| GCAAGACCAATTATAGCCAT+TGG | - | chr8_1:66707784-66707803 | None:intergenic | 40.0% | |
| AGAGAGAAGGAAGAAGAGTG+AGG | - | chr8_1:66702717-66702736 | None:intergenic | 45.0% | |
| ACCTCTTCAAGACCCTGATT+TGG | + | chr8_1:66702766-66702785 | Msa1208550:CDS | 45.0% | |
| ACCAAATCAGGGTCTTGAAG+AGG | - | chr8_1:66702770-66702789 | None:intergenic | 45.0% | |
| GCAGATTGTGCAATTGGGTT+CGG | + | chr8_1:66703133-66703152 | Msa1208550:CDS | 45.0% | |
| TTCGGTAAGAATGCCATTGG+TGG | + | chr8_1:66703151-66703170 | Msa1208550:CDS | 45.0% | |
| ! | AAACGAAGTGTACCGGGTTT+TGG | - | chr8_1:66703232-66703251 | None:intergenic | 45.0% |
| ACTAGCTCCTCTTCCATCAA+TGG | - | chr8_1:66703347-66703366 | None:intergenic | 45.0% | |
| TAAACAAGGTGGGAATGCCA+TGG | + | chr8_1:66703447-66703466 | Msa1208550:CDS | 45.0% | |
| TTCTCCACCCATAATGTCCT+GGG | - | chr8_1:66703483-66703502 | None:intergenic | 45.0% | |
| AGAACAGTATCAGACGGTGA+TGG | + | chr8_1:66703499-66703518 | Msa1208550:CDS | 45.0% | |
| ! | GCCTTGTTCAAAGAATGCCA+AGG | + | chr8_1:66703740-66703759 | Msa1208550:CDS | 45.0% |
| ! | ATGTGATGGTTTGCAGGTGT+AGG | + | chr8_1:66704035-66704054 | Msa1208550:intron | 45.0% |
| GGGCTACAAATCTGTTTCCT+TGG | - | chr8_1:66704147-66704166 | None:intergenic | 45.0% | |
| TTTGCTGAATCTGTCATCGG+GGG | - | chr8_1:66704167-66704186 | None:intergenic | 45.0% | |
| CTTTGCTGAATCTGTCATCG+GGG | - | chr8_1:66704168-66704187 | None:intergenic | 45.0% | |
| CGATGACAGATTCAGCAAAG+AGG | + | chr8_1:66704168-66704187 | Msa1208550:CDS | 45.0% | |
| CATCCTTTCCATTCACCTTC+TGG | - | chr8_1:66704392-66704411 | None:intergenic | 45.0% | |
| CAGAAGGTGAATGGAAAGGA+TGG | + | chr8_1:66704390-66704409 | Msa1208550:CDS | 45.0% | |
| GGATGGAATTGGAGATCAGA+AGG | + | chr8_1:66704407-66704426 | Msa1208550:CDS | 45.0% | |
| GCAAGACCATCTTCTCTAGT+TGG | + | chr8_1:66704515-66704534 | Msa1208550:CDS | 45.0% | |
| AGAGACAGTTGTTTGCTCGA+GGG | - | chr8_1:66704603-66704622 | None:intergenic | 45.0% | |
| !! | ATTCGTATTGGCTCTGTCTC+CGG | + | chr8_1:66704949-66704968 | Msa1208550:intron | 45.0% |
| CATGTATGGTACATGACCCA+TGG | - | chr8_1:66707831-66707850 | None:intergenic | 45.0% | |
| !! | GTTGTGTCCGTTTTGATCGT+CGG | - | chr8_1:66706168-66706187 | None:intergenic | 45.0% |
| AAACGGACACAACCGACTAA+CGG | + | chr8_1:66706175-66706194 | Msa1208550:intron | 45.0% | |
| !! | GCGTCCATTTTGATCGTAAG+AGG | - | chr8_1:66706348-66706367 | None:intergenic | 45.0% |
| ! | TTAGTCGGTTGCGTCTGTTT+TGG | - | chr8_1:66706540-66706559 | None:intergenic | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+GGG | + | chr8_1:66706956-66706975 | Msa1208550:intron | 45.0% |
| CATGTATGGTACATGACCCA+TGG | + | chr8_1:66707831-66707850 | Msa1208550:intron | 45.0% | |
| AATACCAATGGCGCCATTTC+AGG | - | chr8_1:66707867-66707886 | None:intergenic | 45.0% | |
| TGAAATGGCGCCATTGGTAT+TGG | + | chr8_1:66707866-66707885 | Msa1208550:intron | 45.0% | |
| !! | AATTAATTAATTATAGAATA+TGG | + | chr8_1:66704708-66704727 | Msa1208550:three_prime_UTR | 5.0% |
| !! | GATAATTATATAAAAAAATA+AGG | + | chr8_1:66705648-66705667 | Msa1208550:intron | 5.0% |
| !!! | TAAGTTTTTTTATTTTATTT+TGG | - | chr8_1:66707078-66707097 | None:intergenic | 5.0% |
| !! | AAAAAAATTAAAAATTAATC+TGG | + | chr8_1:66707606-66707625 | Msa1208550:intron | 5.0% |
| !! | AAAAAATTAAAAATTAATCT+GGG | + | chr8_1:66707607-66707626 | Msa1208550:intron | 5.0% |
| AGGGTCTTGAAGAGGTGAAG+AGG | - | chr8_1:66702762-66702781 | None:intergenic | 50.0% | |
| ! | AACTTGGGGTACCTCTCATG+TGG | + | chr8_1:66703043-66703062 | Msa1208550:CDS | 50.0% |
| GGTTTCCACTTCCACATGAG+AGG | - | chr8_1:66703057-66703076 | None:intergenic | 50.0% | |
| ! | TTGGAGGTGTGACCCAAACT+GGG | + | chr8_1:66703090-66703109 | Msa1208550:CDS | 50.0% |
| ! | GGGTTCGGTAAGAATGCCAT+TGG | + | chr8_1:66703148-66703167 | Msa1208550:CDS | 50.0% |
| ! | AGATTCTGGTGACGACGATC+CGG | + | chr8_1:66703201-66703220 | Msa1208550:CDS | 50.0% |
| GGAGCTAGTGTTCACATTGC+TGG | + | chr8_1:66703358-66703377 | Msa1208550:CDS | 50.0% | |
| GCTAGTGTTCACATTGCTGG+TGG | + | chr8_1:66703361-66703380 | Msa1208550:CDS | 50.0% | |
| TCTCCACCCATAATGTCCTG+GGG | - | chr8_1:66703482-66703501 | None:intergenic | 50.0% | |
| GTTCTCCACCCATAATGTCC+TGG | - | chr8_1:66703484-66703503 | None:intergenic | 50.0% | |
| GGGTGGAGAACAGTATCAGA+CGG | + | chr8_1:66703493-66703512 | Msa1208550:CDS | 50.0% | |
| TGGTGGAAGTCATGTTTGGG+TGG | + | chr8_1:66703534-66703553 | Msa1208550:CDS | 50.0% | |
| TGAAAAGTGGGAAAAGGGGG+TGG | + | chr8_1:66703874-66703893 | Msa1208550:intron | 50.0% | |
| GAAAAGTGGGAAAAGGGGGT+GGG | + | chr8_1:66703875-66703894 | Msa1208550:intron | 50.0% | |
| ! | ATGGTTTGCAGGTGTAGGCA+TGG | + | chr8_1:66704040-66704059 | Msa1208550:intron | 50.0% |
| TTTACACCATCAGGAGCAGG+AGG | + | chr8_1:66704455-66704474 | Msa1208550:CDS | 50.0% | |
| GGTACAATAACGACTGGTGC+TGG | + | chr8_1:66704536-66704555 | Msa1208550:CDS | 50.0% | |
| GAGACAGTTGTTTGCTCGAG+GGG | - | chr8_1:66704602-66704621 | None:intergenic | 50.0% | |
| CAGAGACAGTTGTTTGCTCG+AGG | - | chr8_1:66704604-66704623 | None:intergenic | 50.0% | |
| GAGCAAACAACTGTCTCTGC+AGG | + | chr8_1:66704605-66704624 | Msa1208550:three_prime_UTR | 50.0% | |
| AAACAACTGTCTCTGCAGGC+TGG | + | chr8_1:66704609-66704628 | Msa1208550:three_prime_UTR | 50.0% | |
| CTTCGTGAGCTTAGCTCAGT+TGG | + | chr8_1:66706951-66706970 | Msa1208550:intron | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+AGG | + | chr8_1:66706955-66706974 | Msa1208550:intron | 50.0% | |
| TGCATTCTACATGCATGGGC+CGG | + | chr8_1:66706983-66707002 | Msa1208550:intron | 50.0% | |
| ! | TTGTGGAGAAGTGGAGTGTC+CGG | - | chr8_1:66707019-66707038 | None:intergenic | 50.0% |
| TTCAGGTACGAGACTGCCAT+GGG | - | chr8_1:66707850-66707869 | None:intergenic | 50.0% | |
| ! | TTTCAGGTACGAGACTGCCA+TGG | - | chr8_1:66707851-66707870 | None:intergenic | 50.0% |
| TGGCAGTCTCGTACCTGAAA+TGG | + | chr8_1:66707851-66707870 | Msa1208550:intron | 50.0% | |
| GGGTACCTCTCATGTGGAAG+TGG | + | chr8_1:66703049-66703068 | Msa1208550:CDS | 55.0% | |
| ! | GTTGGAGGTGTGACCCAAAC+TGG | + | chr8_1:66703089-66703108 | Msa1208550:CDS | 55.0% |
| GATCCGGTGACACCAAAACC+CGG | + | chr8_1:66703217-66703236 | Msa1208550:CDS | 55.0% | |
| !!! | GTACCGGGTTTTGGTGTCAC+CGG | - | chr8_1:66703223-66703242 | None:intergenic | 55.0% |
| ACGGCGAAACGAAGTGTACC+GGG | - | chr8_1:66703238-66703257 | None:intergenic | 55.0% | |
| CACGGCGAAACGAAGTGTAC+CGG | - | chr8_1:66703239-66703258 | None:intergenic | 55.0% | |
| AAGGTGGGAATGCCATGGTG+AGG | + | chr8_1:66703452-66703471 | Msa1208550:CDS | 55.0% | |
| AGGTGGGAATGCCATGGTGA+GGG | + | chr8_1:66703453-66703472 | Msa1208550:CDS | 55.0% | |
| AGGGACTCCCCAGGACATTA+TGG | + | chr8_1:66703472-66703491 | Msa1208550:CDS | 55.0% | |
| GGGACTCCCCAGGACATTAT+GGG | + | chr8_1:66703473-66703492 | Msa1208550:CDS | 55.0% | |
| ACTCCCCAGGACATTATGGG+TGG | + | chr8_1:66703476-66703495 | Msa1208550:CDS | 55.0% | |
| AGGATGCGCCAGAAGGTGAA+TGG | + | chr8_1:66704381-66704400 | Msa1208550:CDS | 55.0% | |
| GCGCCAGAAGGTGAATGGAA+AGG | + | chr8_1:66704386-66704405 | Msa1208550:CDS | 55.0% | |
| !! | ACGACTGGTGCTGGTGTACT+TGG | + | chr8_1:66704545-66704564 | Msa1208550:CDS | 55.0% |
| GCATTCTACATGCATGGGCC+GGG | + | chr8_1:66706984-66707003 | Msa1208550:intron | 55.0% | |
| CATTCTACATGCATGGGCCG+GGG | + | chr8_1:66706985-66707004 | Msa1208550:intron | 55.0% | |
| ! | TGTGGAGAAGTGGAGTGTCC+GGG | - | chr8_1:66707018-66707037 | None:intergenic | 55.0% |
| ! | TTGTGCGAGCTCTAGCCACT+AGG | + | chr8_1:66707044-66707063 | Msa1208550:intron | 55.0% |
| CGTACCTGAAATGGCGCCAT+TGG | + | chr8_1:66707860-66707879 | Msa1208550:intron | 55.0% | |
| AAGCACGAGGATGCGCCAGA+AGG | + | chr8_1:66704374-66704393 | Msa1208550:CDS | 60.0% | |
| GATGCTCCTCCTGCTCCTGA+TGG | - | chr8_1:66704464-66704483 | None:intergenic | 60.0% | |
| TCTCCGGTACGAGACTGCCA+TGG | + | chr8_1:66704965-66704984 | Msa1208550:intron | 60.0% | |
| CTCCGGTACGAGACTGCCAT+GGG | + | chr8_1:66704966-66704985 | Msa1208550:intron | 60.0% | |
| GACCCATGGCAGTCTCGTAC+CGG | - | chr8_1:66707845-66707864 | None:intergenic | 60.0% | |
| ! | GTGGAGAAGTGGAGTGTCCG+GGG | - | chr8_1:66707017-66707036 | None:intergenic | 60.0% |
| TCCTGGGGAGTCCCTCACCA+TGG | - | chr8_1:66703467-66703486 | None:intergenic | 65.0% | |
| AGTGTCCGGGGTTCGAACCC+CGG | - | chr8_1:66707005-66707024 | None:intergenic | 65.0% | |
| GCCATGGTGAGGGACTCCCC+AGG | + | chr8_1:66703463-66703482 | Msa1208550:CDS | 70.0% | |
| ATGGGCCGGGGTTCGAACCC+CGG | + | chr8_1:66706997-66707016 | Msa1208550:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 66702661 | 66707915 | 66702661 | ID=Msa1208550;Name=Msa1208550 |
| chr8_1 | mRNA | 66702661 | 66707915 | 66702661 | ID=Msa1208550-mRNA-1;Parent=Msa1208550;Name=Msa1208550-mRNA-1;_AED=0.09;_eAED=0.09;_QI=34|1|1|1|0.75|0.6|5|394|407 |
| chr8_1 | exon | 66702661 | 66702807 | 66702661 | ID=Msa1208550-mRNA-1:exon:21975;Parent=Msa1208550-mRNA-1 |
| chr8_1 | exon | 66703015 | 66703761 | 66703015 | ID=Msa1208550-mRNA-1:exon:21976;Parent=Msa1208550-mRNA-1 |
| chr8_1 | exon | 66704051 | 66704189 | 66704051 | ID=Msa1208550-mRNA-1:exon:21977;Parent=Msa1208550-mRNA-1 |
| chr8_1 | exon | 66704368 | 66704952 | 66704368 | ID=Msa1208550-mRNA-1:exon:21978;Parent=Msa1208550-mRNA-1 |
| chr8_1 | exon | 66707882 | 66707915 | 66707882 | ID=Msa1208550-mRNA-1:exon:21979;Parent=Msa1208550-mRNA-1 |
| chr8_1 | five_prime_UTR | 66702661 | 66702694 | 66702661 | ID=Msa1208550-mRNA-1:five_prime_utr;Parent=Msa1208550-mRNA-1 |
| chr8_1 | CDS | 66702695 | 66702807 | 66702695 | ID=Msa1208550-mRNA-1:cds;Parent=Msa1208550-mRNA-1 |
| chr8_1 | CDS | 66703015 | 66703761 | 66703015 | ID=Msa1208550-mRNA-1:cds;Parent=Msa1208550-mRNA-1 |
| chr8_1 | CDS | 66704051 | 66704189 | 66704051 | ID=Msa1208550-mRNA-1:cds;Parent=Msa1208550-mRNA-1 |
| chr8_1 | CDS | 66704368 | 66704592 | 66704368 | ID=Msa1208550-mRNA-1:cds;Parent=Msa1208550-mRNA-1 |
| chr8_1 | three_prime_UTR | 66704593 | 66704952 | 66704593 | ID=Msa1208550-mRNA-1:three_prime_utr;Parent=Msa1208550-mRNA-1 |
| chr8_1 | three_prime_UTR | 66707882 | 66707915 | 66707882 | ID=Msa1208550-mRNA-1:three_prime_utr;Parent=Msa1208550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
