Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369810 | XP_003608909.1 | 99.263 | 407 | 3 | 0 | 1 | 407 | 1 | 407 | 0.0 | 842 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369810 | sp|Q93Z25|PLY22_ARATH | 82.045 | 401 | 71 | 1 | 8 | 407 | 32 | 432 | 0.0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369810 | G7JMP6 | 99.263 | 407 | 3 | 0 | 1 | 407 | 1 | 407 | 0.0 | 842 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0019640 | Msa1369810 | 0.832169 | 1.102222e-55 | -8.615850e-47 |
| Msa0157630 | Msa1369810 | 0.825575 | 4.349304e-54 | -8.615850e-47 |
| Msa1258860 | Msa1369810 | 0.965899 | 3.309648e-125 | -8.615850e-47 |
| Msa1330130 | Msa1369810 | 0.977138 | 3.471134e-143 | -8.615850e-47 |
| Msa1208550 | Msa1369810 | 0.958192 | 4.318862e-116 | -8.615850e-47 |
| Msa1208670 | Msa1369810 | 0.971842 | 8.353070e-134 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369810 | MtrunA17_Chr4g0058051 | 99.263 | 407 | 3 | 0 | 1 | 407 | 1 | 407 | 0.0 | 842 |
| Msa1369810 | MtrunA17_Chr3g0116521 | 87.469 | 407 | 50 | 1 | 1 | 407 | 1 | 406 | 0.0 | 692 |
| Msa1369810 | MtrunA17_Chr6g0458201 | 78.803 | 401 | 84 | 1 | 7 | 407 | 5 | 404 | 0.0 | 674 |
| Msa1369810 | MtrunA17_Chr3g0123321 | 78.920 | 389 | 78 | 3 | 19 | 407 | 19 | 403 | 0.0 | 601 |
| Msa1369810 | MtrunA17_Chr7g0237761 | 69.287 | 407 | 121 | 2 | 1 | 407 | 42 | 444 | 0.0 | 592 |
| Msa1369810 | MtrunA17_Chr1g0169731 | 72.680 | 388 | 105 | 1 | 20 | 407 | 64 | 450 | 0.0 | 589 |
| Msa1369810 | MtrunA17_Chr3g0123331 | 68.000 | 400 | 126 | 2 | 9 | 407 | 8 | 406 | 0.0 | 555 |
| Msa1369810 | MtrunA17_Chr1g0210321 | 64.800 | 375 | 128 | 2 | 29 | 400 | 35 | 408 | 0.0 | 525 |
| Msa1369810 | MtrunA17_Chr1g0180381 | 61.461 | 397 | 143 | 3 | 14 | 403 | 22 | 415 | 0.0 | 516 |
| Msa1369810 | MtrunA17_Chr7g0264891 | 63.918 | 388 | 136 | 3 | 14 | 400 | 23 | 407 | 1.24e-179 | 508 |
| Msa1369810 | MtrunA17_Chr4g0060211 | 58.140 | 387 | 152 | 3 | 28 | 407 | 51 | 434 | 3.40e-167 | 475 |
| Msa1369810 | MtrunA17_Chr5g0416061 | 57.181 | 376 | 161 | 0 | 32 | 407 | 74 | 449 | 5.88e-158 | 452 |
| Msa1369810 | MtrunA17_Chr8g0362561 | 58.333 | 372 | 144 | 2 | 47 | 407 | 84 | 455 | 3.86e-157 | 451 |
| Msa1369810 | MtrunA17_Chr4g0075231 | 61.143 | 350 | 133 | 2 | 58 | 407 | 39 | 385 | 1.20e-156 | 447 |
| Msa1369810 | MtrunA17_Chr5g0416041 | 56.316 | 380 | 162 | 1 | 32 | 407 | 70 | 449 | 3.63e-151 | 435 |
| Msa1369810 | MtrunA17_Chr2g0288921 | 52.029 | 419 | 179 | 5 | 1 | 407 | 1 | 409 | 4.79e-151 | 433 |
| Msa1369810 | MtrunA17_Chr6g0452861 | 57.627 | 354 | 150 | 0 | 54 | 407 | 100 | 453 | 1.92e-149 | 431 |
| Msa1369810 | MtrunA17_Chr7g0216581 | 57.345 | 354 | 151 | 0 | 54 | 407 | 98 | 451 | 3.13e-143 | 415 |
| Msa1369810 | MtrunA17_Chr8g0373761 | 44.225 | 355 | 189 | 7 | 58 | 407 | 42 | 392 | 4.61e-96 | 293 |
| Msa1369810 | MtrunA17_Chr8g0373721 | 43.785 | 354 | 192 | 6 | 58 | 407 | 42 | 392 | 9.73e-96 | 292 |
| Msa1369810 | MtrunA17_Chr3g0089181 | 44.663 | 356 | 186 | 9 | 58 | 407 | 23 | 373 | 1.27e-94 | 288 |
| Msa1369810 | MtrunA17_Chr8g0373731 | 44.507 | 355 | 188 | 7 | 58 | 407 | 42 | 392 | 3.53e-89 | 275 |
| Msa1369810 | MtrunA17_Chr8g0373701 | 42.817 | 355 | 194 | 8 | 58 | 407 | 97 | 447 | 1.38e-88 | 275 |
| Msa1369810 | MtrunA17_Chr5g0403481 | 44.225 | 355 | 189 | 7 | 58 | 407 | 41 | 391 | 6.84e-87 | 269 |
| Msa1369810 | MtrunA17_Chr5g0403461 | 44.225 | 355 | 189 | 7 | 58 | 407 | 41 | 391 | 6.84e-87 | 269 |
| Msa1369810 | MtrunA17_Chr5g0403491 | 44.225 | 355 | 189 | 7 | 58 | 407 | 41 | 391 | 6.84e-87 | 269 |
| Msa1369810 | MtrunA17_Chr5g0403391 | 43.662 | 355 | 191 | 7 | 58 | 407 | 41 | 391 | 1.77e-86 | 268 |
| Msa1369810 | MtrunA17_Chr5g0414541 | 43.662 | 355 | 191 | 7 | 58 | 407 | 41 | 391 | 2.49e-86 | 268 |
| Msa1369810 | MtrunA17_Chr5g0403411 | 43.380 | 355 | 192 | 7 | 58 | 407 | 41 | 391 | 1.59e-82 | 258 |
| Msa1369810 | MtrunA17_Chr4g0031851 | 43.269 | 312 | 170 | 6 | 97 | 405 | 28 | 335 | 1.11e-79 | 249 |
| Msa1369810 | MtrunA17_Chr3g0113551 | 60.335 | 179 | 55 | 2 | 152 | 328 | 122 | 286 | 9.40e-70 | 222 |
| Msa1369810 | MtrunA17_Chr1g0183941 | 42.537 | 268 | 151 | 3 | 133 | 399 | 1 | 266 | 9.35e-68 | 216 |
| Msa1369810 | MtrunA17_Chr2g0288901 | 51.282 | 156 | 72 | 2 | 252 | 407 | 5 | 156 | 1.82e-50 | 167 |
| Msa1369810 | MtrunA17_Chr1g0212931 | 37.329 | 292 | 157 | 7 | 71 | 361 | 9 | 275 | 5.13e-46 | 161 |
| Msa1369810 | MtrunA17_Chr2g0288911 | 59.016 | 122 | 49 | 1 | 133 | 253 | 1 | 122 | 2.65e-43 | 147 |
| Msa1369810 | MtrunA17_Chr1g0182021 | 36.364 | 286 | 156 | 6 | 77 | 361 | 64 | 324 | 5.11e-39 | 144 |
| Msa1369810 | MtrunA17_Chr6g0481851 | 47.436 | 156 | 80 | 2 | 208 | 363 | 71 | 224 | 2.14e-37 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369810 | AT5G63180.1 | 82.045 | 401 | 71 | 1 | 8 | 407 | 32 | 432 | 0.0 | 681 |
| Msa1369810 | AT1G67750.1 | 82.776 | 389 | 64 | 2 | 19 | 407 | 23 | 408 | 0.0 | 660 |
| Msa1369810 | AT4G24780.2 | 80.685 | 409 | 76 | 3 | 1 | 407 | 1 | 408 | 0.0 | 658 |
| Msa1369810 | AT4G24780.1 | 80.685 | 409 | 76 | 3 | 1 | 407 | 1 | 408 | 0.0 | 658 |
| Msa1369810 | AT4G13710.1 | 73.698 | 384 | 96 | 2 | 28 | 407 | 88 | 470 | 0.0 | 622 |
| Msa1369810 | AT4G13710.2 | 73.698 | 384 | 96 | 2 | 28 | 407 | 69 | 451 | 0.0 | 619 |
| Msa1369810 | AT3G27400.2 | 72.947 | 414 | 103 | 4 | 1 | 407 | 5 | 416 | 0.0 | 618 |
| Msa1369810 | AT3G27400.1 | 72.947 | 414 | 103 | 4 | 1 | 407 | 1 | 412 | 0.0 | 618 |
| Msa1369810 | AT1G04680.1 | 69.471 | 416 | 109 | 4 | 9 | 407 | 15 | 429 | 0.0 | 586 |
| Msa1369810 | AT3G07010.1 | 72.513 | 382 | 104 | 1 | 26 | 407 | 36 | 416 | 0.0 | 585 |
| Msa1369810 | AT3G07010.2 | 73.210 | 377 | 100 | 1 | 31 | 407 | 8 | 383 | 0.0 | 581 |
| Msa1369810 | AT3G24670.1 | 70.157 | 382 | 113 | 1 | 26 | 407 | 60 | 440 | 0.0 | 575 |
| Msa1369810 | AT3G24230.1 | 67.263 | 391 | 122 | 2 | 21 | 407 | 63 | 451 | 0.0 | 563 |
| Msa1369810 | AT5G48900.1 | 72.775 | 382 | 103 | 1 | 26 | 407 | 37 | 417 | 0.0 | 561 |
| Msa1369810 | AT4G13210.2 | 71.540 | 383 | 107 | 2 | 26 | 407 | 57 | 438 | 0.0 | 561 |
| Msa1369810 | AT4G13210.1 | 71.540 | 383 | 107 | 2 | 26 | 407 | 20 | 401 | 0.0 | 558 |
| Msa1369810 | AT3G53190.1 | 63.119 | 404 | 137 | 3 | 8 | 400 | 13 | 415 | 0.0 | 524 |
| Msa1369810 | AT5G04310.3 | 61.750 | 400 | 137 | 3 | 14 | 400 | 40 | 436 | 8.34e-177 | 502 |
| Msa1369810 | AT5G04310.1 | 61.386 | 404 | 140 | 3 | 14 | 404 | 40 | 440 | 2.70e-175 | 499 |
| Msa1369810 | AT5G04310.2 | 61.386 | 404 | 140 | 3 | 14 | 404 | 40 | 440 | 2.70e-175 | 499 |
| Msa1369810 | AT3G54920.1 | 61.499 | 387 | 124 | 5 | 29 | 400 | 37 | 413 | 1.05e-171 | 489 |
| Msa1369810 | AT5G55720.1 | 57.393 | 399 | 155 | 6 | 11 | 407 | 7 | 392 | 8.22e-165 | 468 |
| Msa1369810 | AT1G11920.1 | 61.714 | 350 | 132 | 2 | 58 | 407 | 37 | 384 | 5.29e-158 | 451 |
| Msa1369810 | AT1G14420.1 | 56.667 | 360 | 151 | 1 | 53 | 407 | 100 | 459 | 2.93e-155 | 446 |
| Msa1369810 | AT2G02720.1 | 57.983 | 357 | 145 | 1 | 56 | 407 | 99 | 455 | 1.38e-153 | 442 |
| Msa1369810 | AT4G22090.1 | 59.143 | 350 | 140 | 2 | 58 | 407 | 47 | 393 | 7.52e-152 | 435 |
| Msa1369810 | AT4G22080.1 | 58.571 | 350 | 142 | 2 | 58 | 407 | 47 | 393 | 9.05e-151 | 432 |
| Msa1369810 | AT5G15110.1 | 57.183 | 355 | 151 | 1 | 54 | 407 | 118 | 472 | 8.48e-150 | 433 |
| Msa1369810 | AT3G01270.1 | 56.338 | 355 | 154 | 1 | 54 | 407 | 121 | 475 | 2.86e-148 | 429 |
| Msa1369810 | AT1G30350.1 | 53.234 | 402 | 152 | 8 | 7 | 407 | 2 | 368 | 7.77e-139 | 401 |
| Msa1369810 | AT5G09280.1 | 48.062 | 258 | 131 | 3 | 91 | 347 | 6 | 261 | 4.14e-77 | 241 |
| Msa1369810 | AT3G55140.1 | 38.127 | 299 | 157 | 8 | 77 | 374 | 16 | 287 | 3.20e-48 | 167 |
| Msa1369810 | AT3G09540.1 | 37.801 | 291 | 149 | 9 | 75 | 361 | 61 | 323 | 1.56e-42 | 153 |
| Msa1369810 | AT3G09540.3 | 37.457 | 291 | 146 | 10 | 75 | 361 | 61 | 319 | 1.82e-40 | 148 |
| Msa1369810 | AT3G55140.2 | 37.121 | 264 | 143 | 7 | 112 | 374 | 22 | 263 | 5.64e-40 | 145 |
| Msa1369810 | AT3G09540.2 | 35.772 | 246 | 132 | 6 | 75 | 319 | 61 | 281 | 2.53e-35 | 132 |
Find 128 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTAGTTGTTAATCTCTT+TGG | 0.204884 | tig0018912:-98098 | Msa1369810:three_prime_UTR |
| AATTAATTAATTATAGAATA+TGG | 0.215022 | tig0018912:-98243 | Msa1369810:three_prime_UTR |
| GTTTGGTTTGGTCATTTCTT+TGG | 0.215949 | tig0018912:-98221 | Msa1369810:three_prime_UTR |
| CATCCTTTCCATTCACCTTC+TGG | 0.229620 | tig0018912:+98558 | None:intergenic |
| GGTTGTAGTTGTCATGTTTA+AGG | 0.241272 | tig0018912:+100259 | None:intergenic |
| GAGATCAGAAGGGGATTTAT+TGG | 0.252599 | tig0018912:-98529 | Msa1369810:CDS |
| GGTTTGATTGATGCTATTTA+TGG | 0.253094 | tig0018912:-99360 | Msa1369810:CDS |
| GAAGGGGATTTATTGGTAAA+TGG | 0.271139 | tig0018912:-98522 | Msa1369810:CDS |
| CCATGATAAAGTTATGCTTT+TGG | 0.272991 | tig0018912:-99298 | Msa1369810:CDS |
| ACTTCTTGTGTAACCAAATC+AGG | 0.275225 | tig0018912:+100167 | None:intergenic |
| AGGGACTCCCCAGGACATTA+TGG | 0.275653 | tig0018912:-99474 | Msa1369810:CDS |
| ATCTACGTCGTAACAGATTC+TGG | 0.307127 | tig0018912:-99759 | Msa1369810:CDS |
| AAACGAAGGGTACCGGGTTT+TGG | 0.308930 | tig0018912:+99717 | None:intergenic |
| AATTCATTCAAGACCATTGA+TGG | 0.310571 | tig0018912:-99615 | Msa1369810:CDS |
| AAGGAAGAAGAGTGAGGAAT+TGG | 0.316047 | tig0018912:+100238 | None:intergenic |
| TGATTCAAGACGAACCATTA+TGG | 0.319794 | tig0018912:-99689 | Msa1369810:CDS |
| AGACTAGCAGATTGTGCAAT+TGG | 0.327645 | tig0018912:-99819 | Msa1369810:CDS |
| AAAATTATTGATATTGGTAT+TGG | 0.335285 | tig0018912:-98014 | Msa1369810:three_prime_UTR |
| TGGTTACACAAGAAGTTAAC+AGG | 0.337713 | tig0018912:-100160 | Msa1369810:intron |
| ACCTCTTCAAGACCCTGATT+TGG | 0.354799 | tig0018912:-100180 | Msa1369810:CDS |
| CACCTCCAACAATCATCAAT+TGG | 0.361226 | tig0018912:+99870 | None:intergenic |
| GGTGATGGTGTTTCAATCTT+TGG | 0.361315 | tig0018912:-99432 | Msa1369810:CDS |
| TCTGTTTCCTTGGCTATTGA+TGG | 0.363689 | tig0018912:+98813 | None:intergenic |
| CACTGGGAAATGTATGCTAT+TGG | 0.369377 | tig0018912:-98853 | Msa1369810:CDS |
| TCTTTGGTGGAAGTCATGTT+TGG | 0.372613 | tig0018912:-99416 | Msa1369810:CDS |
| CTTTGGTGGAAGTCATGTTT+GGG | 0.384354 | tig0018912:-99415 | Msa1369810:CDS |
| CTCTTTAGCTAGGAGAAACT+TGG | 0.387502 | tig0018912:-99919 | Msa1369810:CDS |
| GTTTGATTGATGCTATTTAT+GGG | 0.398857 | tig0018912:-99359 | Msa1369810:CDS |
| GTCATGTTTAAGGTTGTAAA+GGG | 0.399072 | tig0018912:+100269 | None:intergenic |
| CTTGCAAAGATTATCCATAA+TGG | 0.404999 | tig0018912:+99675 | None:intergenic |
| TTATAGAATATGGTTTGGTT+TGG | 0.407768 | tig0018912:-98233 | Msa1369810:three_prime_UTR |
| GTTGGAGGTGTGACCCAAAC+TGG | 0.411442 | tig0018912:-99857 | Msa1369810:CDS |
| GGAGCTAGTGTTCACATTGC+TGG | 0.411776 | tig0018912:-99588 | Msa1369810:CDS |
| CTCTTTGCTGAATCTGTCAT+CGG | 0.413264 | tig0018912:+98780 | None:intergenic |
| GTGAATGGAAAGGATGGAAT+TGG | 0.414525 | tig0018912:-98551 | Msa1369810:CDS |
| ATTAATTATAGAATATGGTT+TGG | 0.414962 | tig0018912:-98238 | Msa1369810:three_prime_UTR |
| TGTCATGTTTAAGGTTGTAA+AGG | 0.430838 | tig0018912:+100268 | None:intergenic |
| TTAATTCAAGGGAGGGAAGT+TGG | 0.436601 | tig0018912:-98311 | Msa1369810:three_prime_UTR |
| TTCTCCACCCATAATGTCCT+GGG | 0.438364 | tig0018912:+99466 | None:intergenic |
| TCTTTGCTGAATCTGTCATC+GGG | 0.444567 | tig0018912:+98781 | None:intergenic |
| GACTAGCAGATTGTGCAATT+GGG | 0.446577 | tig0018912:-99818 | Msa1369810:CDS |
| ACGACTGGTGCTGGTGTACT+TGG | 0.447068 | tig0018912:-98402 | Msa1369810:CDS |
| GTTCTCCACCCATAATGTCC+TGG | 0.462926 | tig0018912:+99465 | None:intergenic |
| GCAGATTGTGCAATTGGGTT+CGG | 0.464118 | tig0018912:-99813 | Msa1369810:CDS |
| GGGCTACAAATCTGTTTCCT+TGG | 0.465553 | tig0018912:+98803 | None:intergenic |
| GGGACTCCCCAGGACATTAT+GGG | 0.466397 | tig0018912:-99473 | Msa1369810:CDS |
| CAGGCTGGTCAATTAATTCA+AGG | 0.466623 | tig0018912:-98323 | Msa1369810:three_prime_UTR |
| GAAACCCAATTGATGATTGT+TGG | 0.470361 | tig0018912:-99875 | Msa1369810:CDS |
| TTTCCTTGGCTATTGATGGT+AGG | 0.471059 | tig0018912:+98817 | None:intergenic |
| GTTTGGTCATTTCTTTGGCT+AGG | 0.479126 | tig0018912:-98216 | Msa1369810:three_prime_UTR |
| AGATTCTGGTGACGACGATC+CGG | 0.480462 | tig0018912:-99745 | Msa1369810:CDS |
| ACCTCCAACAATCATCAATT+GGG | 0.481818 | tig0018912:+99871 | None:intergenic |
| CACGGCGAAACGAAGGGTAC+CGG | 0.485957 | tig0018912:+99710 | None:intergenic |
| TCTTTGTCTAACTGTAATGA+TGG | 0.487158 | tig0018912:-99381 | Msa1369810:CDS |
| GGTGTACTTGGTTGTAAGAA+AGG | 0.495383 | tig0018912:-98390 | Msa1369810:CDS |
| GATGCTCCTCCTGCTCCTGA+TGG | 0.498131 | tig0018912:+98486 | None:intergenic |
| TAAACAATGACTATACTCAC+TGG | 0.505124 | tig0018912:-98870 | Msa1369810:CDS |
| AGGATGCGCCAGAAGGTGAA+TGG | 0.512208 | tig0018912:-98566 | Msa1369810:CDS |
| TTCAAGACCATTGATGGAAG+AGG | 0.512334 | tig0018912:-99609 | Msa1369810:CDS |
| GGGTACCTCTCATGTGGAAG+TGG | 0.513126 | tig0018912:-99897 | Msa1369810:CDS |
| GAGACAGTTGTTTGCTCGAG+GGG | 0.513260 | tig0018912:+98348 | None:intergenic |
| CAGAGACAGTTGTTTGCTCG+AGG | 0.519988 | tig0018912:+98346 | None:intergenic |
| ACTAGCTCCTCTTCCATCAA+TGG | 0.520452 | tig0018912:+99602 | None:intergenic |
| GGATGGAATTGGAGATCAGA+AGG | 0.522837 | tig0018912:-98540 | Msa1369810:CDS |
| AAATCAATGGCTCTTTAGCT+AGG | 0.524502 | tig0018912:-99929 | Msa1369810:CDS |
| TGGGAAATGTATGCTATTGG+AGG | 0.524720 | tig0018912:-98850 | Msa1369810:CDS |
| GAGCAAACAACTGTCTCTGC+AGG | 0.526167 | tig0018912:-98342 | Msa1369810:three_prime_UTR |
| CCAAAAGCATAACTTTATCA+TGG | 0.527550 | tig0018912:+99298 | None:intergenic |
| CATATACATGATTGTAAACA+AGG | 0.532097 | tig0018912:-99513 | Msa1369810:CDS |
| GCAAGACCATCTTCTCTAGT+TGG | 0.537015 | tig0018912:-98432 | Msa1369810:CDS |
| CCAAAGAGATTAACAACTAG+AGG | 0.538229 | tig0018912:+98098 | None:intergenic |
| TAATGGTTCGTCTTGAATCA+CGG | 0.543141 | tig0018912:+99692 | None:intergenic |
| CTTGAATCACGGCGAAACGA+AGG | 0.545050 | tig0018912:+99703 | None:intergenic |
| TCTTTAGCTAGGAGAAACTT+GGG | 0.545580 | tig0018912:-99918 | Msa1369810:CDS |
| ATTGTACCAACTAGAGAAGA+TGG | 0.548453 | tig0018912:+98426 | None:intergenic |
| AGAGACAGTTGTTTGCTCGA+GGG | 0.550545 | tig0018912:+98347 | None:intergenic |
| GGGTTCGGTAAGAATGCCAT+TGG | 0.551684 | tig0018912:-99798 | Msa1369810:CDS |
| AGAGAGAAGGAAGAAGAGTG+AGG | 0.555094 | tig0018912:+100232 | None:intergenic |
| ACATACTGAATTGTAATACA+TGG | 0.557374 | tig0018912:+99561 | None:intergenic |
| AAACAACTGTCTCTGCAGGC+TGG | 0.561868 | tig0018912:-98338 | Msa1369810:three_prime_UTR |
| GTTAGAGATGGTAATTGCAG+TGG | 0.564291 | tig0018912:+99335 | None:intergenic |
| CTTCTTGTGTAACCAAATCA+GGG | 0.566684 | tig0018912:+100168 | None:intergenic |
| TTCGGTAAGAATGCCATTGG+TGG | 0.570130 | tig0018912:-99795 | Msa1369810:CDS |
| GTGACTAATGTTATAATACA+TGG | 0.574654 | tig0018912:-99540 | Msa1369810:CDS |
| TGGTGGAAGTCATGTTTGGG+TGG | 0.575416 | tig0018912:-99412 | Msa1369810:CDS |
| TACATGATTGTAAACAAGGT+GGG | 0.575537 | tig0018912:-99509 | Msa1369810:CDS |
| AGTCATATAATTGTTAGAGA+TGG | 0.575991 | tig0018912:+99323 | None:intergenic |
| TTGAATCACGGCGAAACGAA+GGG | 0.577749 | tig0018912:+99704 | None:intergenic |
| GATGGTGTTTCAATCTTTGG+TGG | 0.582213 | tig0018912:-99429 | Msa1369810:CDS |
| AGGTGGGAATGCCATGGTGA+GGG | 0.586721 | tig0018912:-99493 | Msa1369810:CDS |
| ACCTTGGCATTCTTTGAACA+AGG | 0.589280 | tig0018912:+99205 | None:intergenic |
| GGTTTCCACTTCCACATGAG+AGG | 0.590368 | tig0018912:+99892 | None:intergenic |
| AAACAATGACTATACTCACT+GGG | 0.594536 | tig0018912:-98869 | Msa1369810:CDS |
| GGTACAATAACGACTGGTGC+TGG | 0.596299 | tig0018912:-98411 | Msa1369810:CDS |
| GATGGAATTGGAGATCAGAA+GGG | 0.598901 | tig0018912:-98539 | Msa1369810:CDS |
| CGATGACAGATTCAGCAAAG+AGG | 0.599514 | tig0018912:-98779 | Msa1369810:intron |
| ATGGTTTGCAGGTGTAGGCA+TGG | 0.600072 | tig0018912:-98907 | Msa1369810:intron |
| CTAGTTGGTACAATAACGAC+TGG | 0.602596 | tig0018912:-98417 | Msa1369810:CDS |
| GCTAGTGTTCACATTGCTGG+TGG | 0.603604 | tig0018912:-99585 | Msa1369810:CDS |
| AATCCTACCATCAATAGCCA+AGG | 0.603716 | tig0018912:-98820 | Msa1369810:CDS |
| ATGGAATTGGAGATCAGAAG+GGG | 0.604249 | tig0018912:-98538 | Msa1369810:CDS |
| TTTACACCATCAGGAGCAGG+AGG | 0.609904 | tig0018912:-98492 | Msa1369810:CDS |
| CAGAAGGTGAATGGAAAGGA+TGG | 0.613208 | tig0018912:-98557 | Msa1369810:CDS |
| ACCCAATTGATGATTGTTGG+AGG | 0.614236 | tig0018912:-99872 | Msa1369810:CDS |
| TGGTCAATTAATTCAAGGGA+GGG | 0.614509 | tig0018912:-98318 | Msa1369810:three_prime_UTR |
| AGGCTGGTCAATTAATTCAA+GGG | 0.615208 | tig0018912:-98322 | Msa1369810:three_prime_UTR |
| AGGGTCTTGAAGAGGTGAAG+AGG | 0.616881 | tig0018912:+100187 | None:intergenic |
| ACCAAATCAGGGTCTTGAAG+AGG | 0.622034 | tig0018912:+100179 | None:intergenic |
| AACTTGGGGTACCTCTCATG+TGG | 0.622347 | tig0018912:-99903 | Msa1369810:CDS |
| CTTTGCTGAATCTGTCATCG+GGG | 0.624770 | tig0018912:+98782 | None:intergenic |
| GCGCCAGAAGGTGAATGGAA+AGG | 0.624970 | tig0018912:-98561 | Msa1369810:CDS |
| AAGCACGAGGATGCGCCAGA+AGG | 0.627072 | tig0018912:-98573 | Msa1369810:CDS |
| AAGGTGGGAATGCCATGGTG+AGG | 0.634971 | tig0018912:-99494 | Msa1369810:CDS |
| ATTGTAGGAAGAAAGTAACA+TGG | 0.636622 | tig0018912:+98176 | None:intergenic |
| CTGGTCAATTAATTCAAGGG+AGG | 0.645239 | tig0018912:-98319 | Msa1369810:three_prime_UTR |
| GATCCGGTGACACCAAAACC+CGG | 0.648661 | tig0018912:-99729 | Msa1369810:CDS |
| AGAACAGTATCAGACGGTGA+TGG | 0.653341 | tig0018912:-99447 | Msa1369810:CDS |
| TCTCCACCCATAATGTCCTG+GGG | 0.654071 | tig0018912:+99467 | None:intergenic |
| GATAATCTTTGCAAGAGACA+TGG | 0.658003 | tig0018912:-99667 | Msa1369810:CDS |
| ACTCCCCAGGACATTATGGG+TGG | 0.660040 | tig0018912:-99470 | Msa1369810:CDS |
| TTGGAGGTGTGACCCAAACT+GGG | 0.660140 | tig0018912:-99856 | Msa1369810:CDS |
| TCCTGGGGAGTCCCTCACCA+TGG | 0.666445 | tig0018912:+99482 | None:intergenic |
| TTTGCTGAATCTGTCATCGG+GGG | 0.676835 | tig0018912:+98783 | None:intergenic |
| GGGTGGAGAACAGTATCAGA+CGG | 0.677252 | tig0018912:-99453 | Msa1369810:CDS |
| ATACATGATTGTAAACAAGG+TGG | 0.686460 | tig0018912:-99510 | Msa1369810:CDS |
| CTTTAGCTAGGAGAAACTTG+GGG | 0.690368 | tig0018912:-99917 | Msa1369810:CDS |
| TAAACAAGGTGGGAATGCCA+TGG | 0.700137 | tig0018912:-99499 | Msa1369810:CDS |
| GCCTTGTTCAAAGAATGCCA+AGG | 0.701595 | tig0018912:-99206 | Msa1369810:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTACAAGAAAAAATAATA+GGG | + | tig0018912:98197-98216 | None:intergenic | 10.0% |
| !!! | TTTTTACAAGAAAAAATAAT+AGG | + | tig0018912:98198-98217 | None:intergenic | 10.0% |
| !! | AAAAAAAGAAAAAAGATAAA+CGG | - | tig0018912:99200-99219 | Msa1369810:intron | 10.0% |
| !! | AATGTAAAAATAAAAATTGT+AGG | + | tig0018912:100141-100160 | None:intergenic | 10.0% |
| !! | TATTGAAAAATTATTGATAT+TGG | - | tig0018912:100279-100298 | Msa1369810:five_prime_UTR | 10.0% |
| !!! | TTTTACAAGAAAAAATAATA+GGG | + | tig0018912:98197-98216 | None:intergenic | 10.0% |
| !!! | TTTTTACAAGAAAAAATAAT+AGG | + | tig0018912:98198-98217 | None:intergenic | 10.0% |
| !! | AAAAAAAGAAAAAAGATAAA+CGG | - | tig0018912:99200-99219 | Msa1369810:intron | 10.0% |
| !! | AATGTAAAAATAAAAATTGT+AGG | + | tig0018912:100141-100160 | None:intergenic | 10.0% |
| !! | TATTGAAAAATTATTGATAT+TGG | - | tig0018912:100279-100298 | Msa1369810:five_prime_UTR | 10.0% |
| !!! | TTTTTGTTTATAATACTAGA+GGG | + | tig0018912:98277-98296 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTTATAATACTAG+AGG | + | tig0018912:98278-98297 | None:intergenic | 15.0% |
| !!! | GTTTATCTTTTTTCTTTTTT+TGG | + | tig0018912:99201-99220 | None:intergenic | 15.0% |
| !! | AAAAAAGAAAAAAGATAAAC+GGG | - | tig0018912:99201-99220 | Msa1369810:intron | 15.0% |
| !! | ATTAATTATAGAATATGGTT+TGG | - | tig0018912:100061-100080 | Msa1369810:intron | 15.0% |
| !! | AAAATTATTGATATTGGTAT+TGG | - | tig0018912:100285-100304 | Msa1369810:five_prime_UTR | 15.0% |
| !!! | TTTTTGTTTATAATACTAGA+GGG | + | tig0018912:98277-98296 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTTATAATACTAG+AGG | + | tig0018912:98278-98297 | None:intergenic | 15.0% |
| !!! | GTTTATCTTTTTTCTTTTTT+TGG | + | tig0018912:99201-99220 | None:intergenic | 15.0% |
| !! | AAAAAAGAAAAAAGATAAAC+GGG | - | tig0018912:99201-99220 | Msa1369810:intron | 15.0% |
| !! | ATTAATTATAGAATATGGTT+TGG | - | tig0018912:100061-100080 | Msa1369810:intron | 15.0% |
| !! | ACAAAAATGTACATGTATTT+AGG | - | tig0018912:98290-98309 | Msa1369810:three_prime_UTR | 20.0% |
| !!! | CTTTTTTCTTTTTTTGGTAA+TGG | + | tig0018912:99195-99214 | None:intergenic | 20.0% |
| !! | AATTAGAAAAACATATGTGA+TGG | - | tig0018912:99373-99392 | Msa1369810:CDS | 20.0% |
| !!! | AGACGTTGAATTATTATTTT+AGG | - | tig0018912:99698-99717 | Msa1369810:CDS | 20.0% |
| !! | ACAAAAATGTACATGTATTT+AGG | - | tig0018912:98290-98309 | Msa1369810:three_prime_UTR | 20.0% |
| !!! | CTTTTTTCTTTTTTTGGTAA+TGG | + | tig0018912:99195-99214 | None:intergenic | 20.0% |
| !! | AATTAGAAAAACATATGTGA+TGG | - | tig0018912:99373-99392 | Msa1369810:CDS | 20.0% |
| !!! | AGACGTTGAATTATTATTTT+AGG | - | tig0018912:99698-99717 | Msa1369810:CDS | 20.0% |
| ! | ATTTGTATGTTAAGCTAGTT+TGG | + | tig0018912:98168-98187 | None:intergenic | 25.0% |
| !!! | ATAGTAAAGTATTTTTCTGC+AGG | - | tig0018912:98346-98365 | Msa1369810:three_prime_UTR | 25.0% |
| ! | ACATACTGAATTGTAATACA+TGG | + | tig0018912:98741-98760 | None:intergenic | 25.0% |
| ! | GTGACTAATGTTATAATACA+TGG | - | tig0018912:98759-98778 | Msa1369810:intron | 25.0% |
| ! | CATATACATGATTGTAAACA+AGG | - | tig0018912:98786-98805 | Msa1369810:CDS | 25.0% |
| !! | GTTTGATTGATGCTATTTAT+GGG | - | tig0018912:98940-98959 | Msa1369810:intron | 25.0% |
| ! | AGTCATATAATTGTTAGAGA+TGG | + | tig0018912:98979-98998 | None:intergenic | 25.0% |
| !! | CATGATAAAGTTATGCTTTT+GGG | - | tig0018912:99002-99021 | Msa1369810:intron | 25.0% |
| !!! | ACTATTGCTTTTAATCACTT+TGG | - | tig0018912:99065-99084 | Msa1369810:intron | 25.0% |
| ! | AAAGTATATGATGATTACCT+TGG | + | tig0018912:99113-99132 | None:intergenic | 25.0% |
| ! | TAATTAGTGTCTTCAGTATA+TGG | - | tig0018912:99324-99343 | Msa1369810:CDS | 25.0% |
| ! | AATTAGTGTCTTCAGTATAT+GGG | - | tig0018912:99325-99344 | Msa1369810:CDS | 25.0% |
| !! | AATGCATCGAATGATTTTAA+CGG | - | tig0018912:99588-99607 | Msa1369810:CDS | 25.0% |
| !!! | TTATAGAATATGGTTTGGTT+TGG | - | tig0018912:100066-100085 | Msa1369810:intron | 25.0% |
| ! | ATTTGTATGTTAAGCTAGTT+TGG | + | tig0018912:98168-98187 | None:intergenic | 25.0% |
| !!! | ATAGTAAAGTATTTTTCTGC+AGG | - | tig0018912:98346-98365 | Msa1369810:three_prime_UTR | 25.0% |
| ! | ACATACTGAATTGTAATACA+TGG | + | tig0018912:98741-98760 | None:intergenic | 25.0% |
| ! | GTGACTAATGTTATAATACA+TGG | - | tig0018912:98759-98778 | Msa1369810:intron | 25.0% |
| ! | CATATACATGATTGTAAACA+AGG | - | tig0018912:98786-98805 | Msa1369810:CDS | 25.0% |
| !! | GTTTGATTGATGCTATTTAT+GGG | - | tig0018912:98940-98959 | Msa1369810:intron | 25.0% |
| ! | AGTCATATAATTGTTAGAGA+TGG | + | tig0018912:98979-98998 | None:intergenic | 25.0% |
| !! | CATGATAAAGTTATGCTTTT+GGG | - | tig0018912:99002-99021 | Msa1369810:intron | 25.0% |
| !!! | ACTATTGCTTTTAATCACTT+TGG | - | tig0018912:99065-99084 | Msa1369810:intron | 25.0% |
| ! | AAAGTATATGATGATTACCT+TGG | + | tig0018912:99113-99132 | None:intergenic | 25.0% |
| ! | TAATTAGTGTCTTCAGTATA+TGG | - | tig0018912:99324-99343 | Msa1369810:CDS | 25.0% |
| ! | AATTAGTGTCTTCAGTATAT+GGG | - | tig0018912:99325-99344 | Msa1369810:CDS | 25.0% |
| !! | AATGCATCGAATGATTTTAA+CGG | - | tig0018912:99588-99607 | Msa1369810:CDS | 25.0% |
| !!! | TTATAGAATATGGTTTGGTT+TGG | - | tig0018912:100066-100085 | Msa1369810:intron | 25.0% |
| ! | GTCATGTTTAAGGTTGTAAA+GGG | + | tig0018912:98033-98052 | None:intergenic | 30.0% |
| ! | TGTCATGTTTAAGGTTGTAA+AGG | + | tig0018912:98034-98053 | None:intergenic | 30.0% |
| ! | TTTTTCTGCAGGAAAATCAA+TGG | - | tig0018912:98357-98376 | Msa1369810:three_prime_UTR | 30.0% |
| !! | TTTACCATTTTTACCACCAA+TGG | + | tig0018912:98520-98539 | None:intergenic | 30.0% |
| CTTGCAAAGATTATCCATAA+TGG | + | tig0018912:98627-98646 | None:intergenic | 30.0% | |
| AATTCATTCAAGACCATTGA+TGG | - | tig0018912:98684-98703 | Msa1369810:intron | 30.0% | |
| ATACATGATTGTAAACAAGG+TGG | - | tig0018912:98789-98808 | Msa1369810:CDS | 30.0% | |
| TACATGATTGTAAACAAGGT+GGG | - | tig0018912:98790-98809 | Msa1369810:CDS | 30.0% | |
| TCTTTGTCTAACTGTAATGA+TGG | - | tig0018912:98918-98937 | Msa1369810:intron | 30.0% | |
| ! | GGTTTGATTGATGCTATTTA+TGG | - | tig0018912:98939-98958 | Msa1369810:intron | 30.0% |
| ! | CCAAAAGCATAACTTTATCA+TGG | + | tig0018912:99004-99023 | None:intergenic | 30.0% |
| ! | CCATGATAAAGTTATGCTTT+TGG | - | tig0018912:99001-99020 | Msa1369810:intron | 30.0% |
| ! | ATAAACGGGTTTATGAAAAG+TGG | - | tig0018912:99215-99234 | Msa1369810:CDS | 30.0% |
| ! | TAAACGGGTTTATGAAAAGT+GGG | - | tig0018912:99216-99235 | Msa1369810:CDS | 30.0% |
| GTTTATGAAAAGTGGGAAAA+GGG | - | tig0018912:99223-99242 | Msa1369810:CDS | 30.0% | |
| TTTATGAAAAGTGGGAAAAG+GGG | - | tig0018912:99224-99243 | Msa1369810:CDS | 30.0% | |
| AGTGTAGAAATCAATGTGTA+TGG | - | tig0018912:99269-99288 | Msa1369810:CDS | 30.0% | |
| GTGTAGAAATCAATGTGTAT+GGG | - | tig0018912:99270-99289 | Msa1369810:CDS | 30.0% | |
| ATTAGTGTCTTCAGTATATG+GGG | - | tig0018912:99326-99345 | Msa1369810:CDS | 30.0% | |
| TAAACAATGACTATACTCAC+TGG | - | tig0018912:99429-99448 | Msa1369810:CDS | 30.0% | |
| AAACAATGACTATACTCACT+GGG | - | tig0018912:99430-99449 | Msa1369810:CDS | 30.0% | |
| ATTGTAGGAAGAAAGTAACA+TGG | + | tig0018912:100126-100145 | None:intergenic | 30.0% | |
| ! | GTCATGTTTAAGGTTGTAAA+GGG | + | tig0018912:98033-98052 | None:intergenic | 30.0% |
| ! | TGTCATGTTTAAGGTTGTAA+AGG | + | tig0018912:98034-98053 | None:intergenic | 30.0% |
| ! | TTTTTCTGCAGGAAAATCAA+TGG | - | tig0018912:98357-98376 | Msa1369810:three_prime_UTR | 30.0% |
| !! | TTTACCATTTTTACCACCAA+TGG | + | tig0018912:98520-98539 | None:intergenic | 30.0% |
| CTTGCAAAGATTATCCATAA+TGG | + | tig0018912:98627-98646 | None:intergenic | 30.0% | |
| AATTCATTCAAGACCATTGA+TGG | - | tig0018912:98684-98703 | Msa1369810:intron | 30.0% | |
| ATACATGATTGTAAACAAGG+TGG | - | tig0018912:98789-98808 | Msa1369810:CDS | 30.0% | |
| TACATGATTGTAAACAAGGT+GGG | - | tig0018912:98790-98809 | Msa1369810:CDS | 30.0% | |
| TCTTTGTCTAACTGTAATGA+TGG | - | tig0018912:98918-98937 | Msa1369810:intron | 30.0% | |
| ! | GGTTTGATTGATGCTATTTA+TGG | - | tig0018912:98939-98958 | Msa1369810:intron | 30.0% |
| ! | CCAAAAGCATAACTTTATCA+TGG | + | tig0018912:99004-99023 | None:intergenic | 30.0% |
| ! | CCATGATAAAGTTATGCTTT+TGG | - | tig0018912:99001-99020 | Msa1369810:intron | 30.0% |
| ! | ATAAACGGGTTTATGAAAAG+TGG | - | tig0018912:99215-99234 | Msa1369810:CDS | 30.0% |
| ! | TAAACGGGTTTATGAAAAGT+GGG | - | tig0018912:99216-99235 | Msa1369810:CDS | 30.0% |
| GTTTATGAAAAGTGGGAAAA+GGG | - | tig0018912:99223-99242 | Msa1369810:CDS | 30.0% | |
| TTTATGAAAAGTGGGAAAAG+GGG | - | tig0018912:99224-99243 | Msa1369810:CDS | 30.0% | |
| AGTGTAGAAATCAATGTGTA+TGG | - | tig0018912:99269-99288 | Msa1369810:CDS | 30.0% | |
| GTGTAGAAATCAATGTGTAT+GGG | - | tig0018912:99270-99289 | Msa1369810:CDS | 30.0% | |
| ATTAGTGTCTTCAGTATATG+GGG | - | tig0018912:99326-99345 | Msa1369810:CDS | 30.0% | |
| TAAACAATGACTATACTCAC+TGG | - | tig0018912:99429-99448 | Msa1369810:CDS | 30.0% | |
| AAACAATGACTATACTCACT+GGG | - | tig0018912:99430-99449 | Msa1369810:CDS | 30.0% | |
| ATTGTAGGAAGAAAGTAACA+TGG | + | tig0018912:100126-100145 | None:intergenic | 30.0% | |
| GGTTGTAGTTGTCATGTTTA+AGG | + | tig0018912:98043-98062 | None:intergenic | 35.0% | |
| AGGAAATGAGAGAAAAAGTG+AGG | + | tig0018912:98095-98114 | None:intergenic | 35.0% | |
| CTTCTTGTGTAACCAAATCA+GGG | + | tig0018912:98134-98153 | None:intergenic | 35.0% | |
| ACTTCTTGTGTAACCAAATC+AGG | + | tig0018912:98135-98154 | None:intergenic | 35.0% | |
| TGGTTACACAAGAAGTTAAC+AGG | - | tig0018912:98139-98158 | Msa1369810:three_prime_UTR | 35.0% | |
| AAATCAATGGCTCTTTAGCT+AGG | - | tig0018912:98370-98389 | Msa1369810:exon | 35.0% | |
| TCTTTAGCTAGGAGAAACTT+GGG | - | tig0018912:98381-98400 | Msa1369810:CDS | 35.0% | |
| ! | GAAACCCAATTGATGATTGT+TGG | - | tig0018912:98424-98443 | Msa1369810:CDS | 35.0% |
| ACCTCCAACAATCATCAATT+GGG | + | tig0018912:98431-98450 | None:intergenic | 35.0% | |
| !!! | GTCTGTTTTTTTCCCAGTTT+GGG | + | tig0018912:98458-98477 | None:intergenic | 35.0% |
| !!! | TGTCTGTTTTTTTCCCAGTT+TGG | + | tig0018912:98459-98478 | None:intergenic | 35.0% |
| ! | AATGCCATTGGTGGTAAAAA+TGG | - | tig0018912:98513-98532 | Msa1369810:CDS | 35.0% |
| TAATGGTTCGTCTTGAATCA+CGG | + | tig0018912:98610-98629 | None:intergenic | 35.0% | |
| TGATTCAAGACGAACCATTA+TGG | - | tig0018912:98610-98629 | Msa1369810:intron | 35.0% | |
| GATAATCTTTGCAAGAGACA+TGG | - | tig0018912:98632-98651 | Msa1369810:intron | 35.0% | |
| ! | GCTTTTAATCACTTTGGTGA+AGG | - | tig0018912:99071-99090 | Msa1369810:intron | 35.0% |
| GGTTTATGAAAAGTGGGAAA+AGG | - | tig0018912:99222-99241 | Msa1369810:CDS | 35.0% | |
| TTATGAAAAGTGGGAAAAGG+GGG | - | tig0018912:99225-99244 | Msa1369810:CDS | 35.0% | |
| ! | AAACATATGTGATGGTTTGC+AGG | - | tig0018912:99381-99400 | Msa1369810:CDS | 35.0% |
| GAAGGGGATTTATTGGTAAA+TGG | - | tig0018912:99777-99796 | Msa1369810:CDS | 35.0% | |
| ATTGTACCAACTAGAGAAGA+TGG | + | tig0018912:99876-99895 | None:intergenic | 35.0% | |
| ! | AGGCTGGTCAATTAATTCAA+GGG | - | tig0018912:99977-99996 | Msa1369810:intron | 35.0% |
| TGGTCAATTAATTCAAGGGA+GGG | - | tig0018912:99981-100000 | Msa1369810:intron | 35.0% | |
| !! | GTTTGGTTTGGTCATTTCTT+TGG | - | tig0018912:100078-100097 | Msa1369810:intron | 35.0% |
| CCAAAGAGATTAACAACTAG+AGG | + | tig0018912:100204-100223 | None:intergenic | 35.0% | |
| CCTCTAGTTGTTAATCTCTT+TGG | - | tig0018912:100201-100220 | Msa1369810:CDS | 35.0% | |
| ! | CTTCTGCAATTGTTTTCTCT+TGG | + | tig0018912:100248-100267 | None:intergenic | 35.0% |
| GGTTGTAGTTGTCATGTTTA+AGG | + | tig0018912:98043-98062 | None:intergenic | 35.0% | |
| AGGAAATGAGAGAAAAAGTG+AGG | + | tig0018912:98095-98114 | None:intergenic | 35.0% | |
| CTTCTTGTGTAACCAAATCA+GGG | + | tig0018912:98134-98153 | None:intergenic | 35.0% | |
| ACTTCTTGTGTAACCAAATC+AGG | + | tig0018912:98135-98154 | None:intergenic | 35.0% | |
| TGGTTACACAAGAAGTTAAC+AGG | - | tig0018912:98139-98158 | Msa1369810:three_prime_UTR | 35.0% | |
| AAATCAATGGCTCTTTAGCT+AGG | - | tig0018912:98370-98389 | Msa1369810:exon | 35.0% | |
| TCTTTAGCTAGGAGAAACTT+GGG | - | tig0018912:98381-98400 | Msa1369810:CDS | 35.0% | |
| ! | GAAACCCAATTGATGATTGT+TGG | - | tig0018912:98424-98443 | Msa1369810:CDS | 35.0% |
| ACCTCCAACAATCATCAATT+GGG | + | tig0018912:98431-98450 | None:intergenic | 35.0% | |
| !!! | GTCTGTTTTTTTCCCAGTTT+GGG | + | tig0018912:98458-98477 | None:intergenic | 35.0% |
| !!! | TGTCTGTTTTTTTCCCAGTT+TGG | + | tig0018912:98459-98478 | None:intergenic | 35.0% |
| ! | AATGCCATTGGTGGTAAAAA+TGG | - | tig0018912:98513-98532 | Msa1369810:CDS | 35.0% |
| TAATGGTTCGTCTTGAATCA+CGG | + | tig0018912:98610-98629 | None:intergenic | 35.0% | |
| TGATTCAAGACGAACCATTA+TGG | - | tig0018912:98610-98629 | Msa1369810:intron | 35.0% | |
| GATAATCTTTGCAAGAGACA+TGG | - | tig0018912:98632-98651 | Msa1369810:intron | 35.0% | |
| ! | GCTTTTAATCACTTTGGTGA+AGG | - | tig0018912:99071-99090 | Msa1369810:intron | 35.0% |
| GGTTTATGAAAAGTGGGAAA+AGG | - | tig0018912:99222-99241 | Msa1369810:CDS | 35.0% | |
| TTATGAAAAGTGGGAAAAGG+GGG | - | tig0018912:99225-99244 | Msa1369810:CDS | 35.0% | |
| ! | AAACATATGTGATGGTTTGC+AGG | - | tig0018912:99381-99400 | Msa1369810:CDS | 35.0% |
| GAAGGGGATTTATTGGTAAA+TGG | - | tig0018912:99777-99796 | Msa1369810:CDS | 35.0% | |
| ATTGTACCAACTAGAGAAGA+TGG | + | tig0018912:99876-99895 | None:intergenic | 35.0% | |
| ! | AGGCTGGTCAATTAATTCAA+GGG | - | tig0018912:99977-99996 | Msa1369810:intron | 35.0% |
| TGGTCAATTAATTCAAGGGA+GGG | - | tig0018912:99981-100000 | Msa1369810:intron | 35.0% | |
| !! | GTTTGGTTTGGTCATTTCTT+TGG | - | tig0018912:100078-100097 | Msa1369810:intron | 35.0% |
| CCAAAGAGATTAACAACTAG+AGG | + | tig0018912:100204-100223 | None:intergenic | 35.0% | |
| CCTCTAGTTGTTAATCTCTT+TGG | - | tig0018912:100201-100220 | Msa1369810:CDS | 35.0% | |
| ! | CTTCTGCAATTGTTTTCTCT+TGG | + | tig0018912:100248-100267 | None:intergenic | 35.0% |
| AAGGAAGAAGAGTGAGGAAT+TGG | + | tig0018912:98064-98083 | None:intergenic | 40.0% | |
| AAAAAGTGAGGAGAGAGAGA+AGG | + | tig0018912:98083-98102 | None:intergenic | 40.0% | |
| CTCTTTAGCTAGGAGAAACT+TGG | - | tig0018912:98380-98399 | Msa1369810:CDS | 40.0% | |
| CTTTAGCTAGGAGAAACTTG+GGG | - | tig0018912:98382-98401 | Msa1369810:CDS | 40.0% | |
| ! | ACCCAATTGATGATTGTTGG+AGG | - | tig0018912:98427-98446 | Msa1369810:CDS | 40.0% |
| CACCTCCAACAATCATCAAT+TGG | + | tig0018912:98432-98451 | None:intergenic | 40.0% | |
| AGACTAGCAGATTGTGCAAT+TGG | - | tig0018912:98480-98499 | Msa1369810:CDS | 40.0% | |
| GACTAGCAGATTGTGCAATT+GGG | - | tig0018912:98481-98500 | Msa1369810:CDS | 40.0% | |
| ATCTACGTCGTAACAGATTC+TGG | - | tig0018912:98540-98559 | Msa1369810:CDS | 40.0% | |
| TTCAAGACCATTGATGGAAG+AGG | - | tig0018912:98690-98709 | Msa1369810:intron | 40.0% | |
| ! | GGTGATGGTGTTTCAATCTT+TGG | - | tig0018912:98867-98886 | Msa1369810:CDS | 40.0% |
| GATGGTGTTTCAATCTTTGG+TGG | - | tig0018912:98870-98889 | Msa1369810:CDS | 40.0% | |
| TCTTTGGTGGAAGTCATGTT+TGG | - | tig0018912:98883-98902 | Msa1369810:CDS | 40.0% | |
| CTTTGGTGGAAGTCATGTTT+GGG | - | tig0018912:98884-98903 | Msa1369810:CDS | 40.0% | |
| GTTAGAGATGGTAATTGCAG+TGG | + | tig0018912:98967-98986 | None:intergenic | 40.0% | |
| ACCTTGGCATTCTTTGAACA+AGG | + | tig0018912:99097-99116 | None:intergenic | 40.0% | |
| GAAATCAATGTGTATGGGAG+TGG | - | tig0018912:99275-99294 | Msa1369810:CDS | 40.0% | |
| !! | TAGGCATGGTTATTTTCACG+TGG | - | tig0018912:99406-99425 | Msa1369810:CDS | 40.0% |
| CACTGGGAAATGTATGCTAT+TGG | - | tig0018912:99446-99465 | Msa1369810:CDS | 40.0% | |
| TGGGAAATGTATGCTATTGG+AGG | - | tig0018912:99449-99468 | Msa1369810:CDS | 40.0% | |
| AATCCTACCATCAATAGCCA+AGG | - | tig0018912:99479-99498 | Msa1369810:CDS | 40.0% | |
| ! | TTTCCTTGGCTATTGATGGT+AGG | + | tig0018912:99485-99504 | None:intergenic | 40.0% |
| TCTGTTTCCTTGGCTATTGA+TGG | + | tig0018912:99489-99508 | None:intergenic | 40.0% | |
| TCTTTGCTGAATCTGTCATC+GGG | + | tig0018912:99521-99540 | None:intergenic | 40.0% | |
| CTCTTTGCTGAATCTGTCAT+CGG | + | tig0018912:99522-99541 | None:intergenic | 40.0% | |
| !! | ATTTTAGGTGACAAAGCACG+AGG | - | tig0018912:99713-99732 | Msa1369810:CDS | 40.0% |
| GTGAATGGAAAGGATGGAAT+TGG | - | tig0018912:99748-99767 | Msa1369810:CDS | 40.0% | |
| GATGGAATTGGAGATCAGAA+GGG | - | tig0018912:99760-99779 | Msa1369810:CDS | 40.0% | |
| ATGGAATTGGAGATCAGAAG+GGG | - | tig0018912:99761-99780 | Msa1369810:CDS | 40.0% | |
| GAGATCAGAAGGGGATTTAT+TGG | - | tig0018912:99770-99789 | Msa1369810:CDS | 40.0% | |
| !!! | GGTGCATTTTTTACACCATC+AGG | - | tig0018912:99798-99817 | Msa1369810:CDS | 40.0% |
| !!! | TTTTTTACACCATCAGGAGC+AGG | - | tig0018912:99804-99823 | Msa1369810:CDS | 40.0% |
| ! | CTAGTTGGTACAATAACGAC+TGG | - | tig0018912:99882-99901 | Msa1369810:CDS | 40.0% |
| GGTGTACTTGGTTGTAAGAA+AGG | - | tig0018912:99909-99928 | Msa1369810:CDS | 40.0% | |
| ! | CAGGCTGGTCAATTAATTCA+AGG | - | tig0018912:99976-99995 | Msa1369810:intron | 40.0% |
| CTGGTCAATTAATTCAAGGG+AGG | - | tig0018912:99980-99999 | Msa1369810:intron | 40.0% | |
| TTAATTCAAGGGAGGGAAGT+TGG | - | tig0018912:99988-100007 | Msa1369810:intron | 40.0% | |
| GTTTGGTCATTTCTTTGGCT+AGG | - | tig0018912:100083-100102 | Msa1369810:intron | 40.0% | |
| AAGGAAGAAGAGTGAGGAAT+TGG | + | tig0018912:98064-98083 | None:intergenic | 40.0% | |
| AAAAAGTGAGGAGAGAGAGA+AGG | + | tig0018912:98083-98102 | None:intergenic | 40.0% | |
| CTCTTTAGCTAGGAGAAACT+TGG | - | tig0018912:98380-98399 | Msa1369810:CDS | 40.0% | |
| CTTTAGCTAGGAGAAACTTG+GGG | - | tig0018912:98382-98401 | Msa1369810:CDS | 40.0% | |
| ! | ACCCAATTGATGATTGTTGG+AGG | - | tig0018912:98427-98446 | Msa1369810:CDS | 40.0% |
| CACCTCCAACAATCATCAAT+TGG | + | tig0018912:98432-98451 | None:intergenic | 40.0% | |
| AGACTAGCAGATTGTGCAAT+TGG | - | tig0018912:98480-98499 | Msa1369810:CDS | 40.0% | |
| GACTAGCAGATTGTGCAATT+GGG | - | tig0018912:98481-98500 | Msa1369810:CDS | 40.0% | |
| ATCTACGTCGTAACAGATTC+TGG | - | tig0018912:98540-98559 | Msa1369810:CDS | 40.0% | |
| TTCAAGACCATTGATGGAAG+AGG | - | tig0018912:98690-98709 | Msa1369810:intron | 40.0% | |
| ! | GGTGATGGTGTTTCAATCTT+TGG | - | tig0018912:98867-98886 | Msa1369810:CDS | 40.0% |
| GATGGTGTTTCAATCTTTGG+TGG | - | tig0018912:98870-98889 | Msa1369810:CDS | 40.0% | |
| TCTTTGGTGGAAGTCATGTT+TGG | - | tig0018912:98883-98902 | Msa1369810:CDS | 40.0% | |
| CTTTGGTGGAAGTCATGTTT+GGG | - | tig0018912:98884-98903 | Msa1369810:CDS | 40.0% | |
| GTTAGAGATGGTAATTGCAG+TGG | + | tig0018912:98967-98986 | None:intergenic | 40.0% | |
| ACCTTGGCATTCTTTGAACA+AGG | + | tig0018912:99097-99116 | None:intergenic | 40.0% | |
| GAAATCAATGTGTATGGGAG+TGG | - | tig0018912:99275-99294 | Msa1369810:CDS | 40.0% | |
| !! | TAGGCATGGTTATTTTCACG+TGG | - | tig0018912:99406-99425 | Msa1369810:CDS | 40.0% |
| CACTGGGAAATGTATGCTAT+TGG | - | tig0018912:99446-99465 | Msa1369810:CDS | 40.0% | |
| TGGGAAATGTATGCTATTGG+AGG | - | tig0018912:99449-99468 | Msa1369810:CDS | 40.0% | |
| AATCCTACCATCAATAGCCA+AGG | - | tig0018912:99479-99498 | Msa1369810:CDS | 40.0% | |
| ! | TTTCCTTGGCTATTGATGGT+AGG | + | tig0018912:99485-99504 | None:intergenic | 40.0% |
| TCTGTTTCCTTGGCTATTGA+TGG | + | tig0018912:99489-99508 | None:intergenic | 40.0% | |
| TCTTTGCTGAATCTGTCATC+GGG | + | tig0018912:99521-99540 | None:intergenic | 40.0% | |
| CTCTTTGCTGAATCTGTCAT+CGG | + | tig0018912:99522-99541 | None:intergenic | 40.0% | |
| !! | ATTTTAGGTGACAAAGCACG+AGG | - | tig0018912:99713-99732 | Msa1369810:CDS | 40.0% |
| GTGAATGGAAAGGATGGAAT+TGG | - | tig0018912:99748-99767 | Msa1369810:CDS | 40.0% | |
| GATGGAATTGGAGATCAGAA+GGG | - | tig0018912:99760-99779 | Msa1369810:CDS | 40.0% | |
| ATGGAATTGGAGATCAGAAG+GGG | - | tig0018912:99761-99780 | Msa1369810:CDS | 40.0% | |
| GAGATCAGAAGGGGATTTAT+TGG | - | tig0018912:99770-99789 | Msa1369810:CDS | 40.0% | |
| !!! | GGTGCATTTTTTACACCATC+AGG | - | tig0018912:99798-99817 | Msa1369810:CDS | 40.0% |
| !!! | TTTTTTACACCATCAGGAGC+AGG | - | tig0018912:99804-99823 | Msa1369810:CDS | 40.0% |
| ! | CTAGTTGGTACAATAACGAC+TGG | - | tig0018912:99882-99901 | Msa1369810:CDS | 40.0% |
| GGTGTACTTGGTTGTAAGAA+AGG | - | tig0018912:99909-99928 | Msa1369810:CDS | 40.0% | |
| ! | CAGGCTGGTCAATTAATTCA+AGG | - | tig0018912:99976-99995 | Msa1369810:intron | 40.0% |
| CTGGTCAATTAATTCAAGGG+AGG | - | tig0018912:99980-99999 | Msa1369810:intron | 40.0% | |
| TTAATTCAAGGGAGGGAAGT+TGG | - | tig0018912:99988-100007 | Msa1369810:intron | 40.0% | |
| GTTTGGTCATTTCTTTGGCT+AGG | - | tig0018912:100083-100102 | Msa1369810:intron | 40.0% | |
| AGAGAGAAGGAAGAAGAGTG+AGG | + | tig0018912:98070-98089 | None:intergenic | 45.0% | |
| ACCTCTTCAAGACCCTGATT+TGG | - | tig0018912:98119-98138 | Msa1369810:three_prime_UTR | 45.0% | |
| ACCAAATCAGGGTCTTGAAG+AGG | + | tig0018912:98123-98142 | None:intergenic | 45.0% | |
| GCAGATTGTGCAATTGGGTT+CGG | - | tig0018912:98486-98505 | Msa1369810:CDS | 45.0% | |
| TTCGGTAAGAATGCCATTGG+TGG | - | tig0018912:98504-98523 | Msa1369810:CDS | 45.0% | |
| TTGAATCACGGCGAAACGAA+GGG | + | tig0018912:98598-98617 | None:intergenic | 45.0% | |
| ACTAGCTCCTCTTCCATCAA+TGG | + | tig0018912:98700-98719 | None:intergenic | 45.0% | |
| TAAACAAGGTGGGAATGCCA+TGG | - | tig0018912:98800-98819 | Msa1369810:CDS | 45.0% | |
| TTCTCCACCCATAATGTCCT+GGG | + | tig0018912:98836-98855 | None:intergenic | 45.0% | |
| AGAACAGTATCAGACGGTGA+TGG | - | tig0018912:98852-98871 | Msa1369810:CDS | 45.0% | |
| ! | GCCTTGTTCAAAGAATGCCA+AGG | - | tig0018912:99093-99112 | Msa1369810:intron | 45.0% |
| ! | ATGTGATGGTTTGCAGGTGT+AGG | - | tig0018912:99387-99406 | Msa1369810:CDS | 45.0% |
| GGGCTACAAATCTGTTTCCT+TGG | + | tig0018912:99499-99518 | None:intergenic | 45.0% | |
| TTTGCTGAATCTGTCATCGG+GGG | + | tig0018912:99519-99538 | None:intergenic | 45.0% | |
| CTTTGCTGAATCTGTCATCG+GGG | + | tig0018912:99520-99539 | None:intergenic | 45.0% | |
| CGATGACAGATTCAGCAAAG+AGG | - | tig0018912:99520-99539 | Msa1369810:CDS | 45.0% | |
| CATCCTTTCCATTCACCTTC+TGG | + | tig0018912:99744-99763 | None:intergenic | 45.0% | |
| CAGAAGGTGAATGGAAAGGA+TGG | - | tig0018912:99742-99761 | Msa1369810:CDS | 45.0% | |
| GGATGGAATTGGAGATCAGA+AGG | - | tig0018912:99759-99778 | Msa1369810:CDS | 45.0% | |
| GCAAGACCATCTTCTCTAGT+TGG | - | tig0018912:99867-99886 | Msa1369810:CDS | 45.0% | |
| AGAGACAGTTGTTTGCTCGA+GGG | + | tig0018912:99955-99974 | None:intergenic | 45.0% | |
| AGAGAGAAGGAAGAAGAGTG+AGG | + | tig0018912:98070-98089 | None:intergenic | 45.0% | |
| ACCTCTTCAAGACCCTGATT+TGG | - | tig0018912:98119-98138 | Msa1369810:three_prime_UTR | 45.0% | |
| ACCAAATCAGGGTCTTGAAG+AGG | + | tig0018912:98123-98142 | None:intergenic | 45.0% | |
| GCAGATTGTGCAATTGGGTT+CGG | - | tig0018912:98486-98505 | Msa1369810:CDS | 45.0% | |
| TTCGGTAAGAATGCCATTGG+TGG | - | tig0018912:98504-98523 | Msa1369810:CDS | 45.0% | |
| TTGAATCACGGCGAAACGAA+GGG | + | tig0018912:98598-98617 | None:intergenic | 45.0% | |
| ACTAGCTCCTCTTCCATCAA+TGG | + | tig0018912:98700-98719 | None:intergenic | 45.0% | |
| TAAACAAGGTGGGAATGCCA+TGG | - | tig0018912:98800-98819 | Msa1369810:CDS | 45.0% | |
| TTCTCCACCCATAATGTCCT+GGG | + | tig0018912:98836-98855 | None:intergenic | 45.0% | |
| AGAACAGTATCAGACGGTGA+TGG | - | tig0018912:98852-98871 | Msa1369810:CDS | 45.0% | |
| ! | GCCTTGTTCAAAGAATGCCA+AGG | - | tig0018912:99093-99112 | Msa1369810:intron | 45.0% |
| ! | ATGTGATGGTTTGCAGGTGT+AGG | - | tig0018912:99387-99406 | Msa1369810:CDS | 45.0% |
| GGGCTACAAATCTGTTTCCT+TGG | + | tig0018912:99499-99518 | None:intergenic | 45.0% | |
| TTTGCTGAATCTGTCATCGG+GGG | + | tig0018912:99519-99538 | None:intergenic | 45.0% | |
| CTTTGCTGAATCTGTCATCG+GGG | + | tig0018912:99520-99539 | None:intergenic | 45.0% | |
| CGATGACAGATTCAGCAAAG+AGG | - | tig0018912:99520-99539 | Msa1369810:CDS | 45.0% | |
| CATCCTTTCCATTCACCTTC+TGG | + | tig0018912:99744-99763 | None:intergenic | 45.0% | |
| CAGAAGGTGAATGGAAAGGA+TGG | - | tig0018912:99742-99761 | Msa1369810:CDS | 45.0% | |
| GGATGGAATTGGAGATCAGA+AGG | - | tig0018912:99759-99778 | Msa1369810:CDS | 45.0% | |
| GCAAGACCATCTTCTCTAGT+TGG | - | tig0018912:99867-99886 | Msa1369810:CDS | 45.0% | |
| AGAGACAGTTGTTTGCTCGA+GGG | + | tig0018912:99955-99974 | None:intergenic | 45.0% | |
| !! | AATTAATTAATTATAGAATA+TGG | - | tig0018912:100056-100075 | Msa1369810:intron | 5.0% |
| !! | AATTAATTAATTATAGAATA+TGG | - | tig0018912:100056-100075 | Msa1369810:intron | 5.0% |
| AGGGTCTTGAAGAGGTGAAG+AGG | + | tig0018912:98115-98134 | None:intergenic | 50.0% | |
| ! | AACTTGGGGTACCTCTCATG+TGG | - | tig0018912:98396-98415 | Msa1369810:CDS | 50.0% |
| GGTTTCCACTTCCACATGAG+AGG | + | tig0018912:98410-98429 | None:intergenic | 50.0% | |
| ! | TTGGAGGTGTGACCCAAACT+GGG | - | tig0018912:98443-98462 | Msa1369810:CDS | 50.0% |
| ! | GGGTTCGGTAAGAATGCCAT+TGG | - | tig0018912:98501-98520 | Msa1369810:CDS | 50.0% |
| ! | AGATTCTGGTGACGACGATC+CGG | - | tig0018912:98554-98573 | Msa1369810:CDS | 50.0% |
| !!! | AAACGAAGGGTACCGGGTTT+TGG | + | tig0018912:98585-98604 | None:intergenic | 50.0% |
| CTTGAATCACGGCGAAACGA+AGG | + | tig0018912:98599-98618 | None:intergenic | 50.0% | |
| GGAGCTAGTGTTCACATTGC+TGG | - | tig0018912:98711-98730 | Msa1369810:intron | 50.0% | |
| GCTAGTGTTCACATTGCTGG+TGG | - | tig0018912:98714-98733 | Msa1369810:intron | 50.0% | |
| TCTCCACCCATAATGTCCTG+GGG | + | tig0018912:98835-98854 | None:intergenic | 50.0% | |
| GTTCTCCACCCATAATGTCC+TGG | + | tig0018912:98837-98856 | None:intergenic | 50.0% | |
| GGGTGGAGAACAGTATCAGA+CGG | - | tig0018912:98846-98865 | Msa1369810:CDS | 50.0% | |
| TGGTGGAAGTCATGTTTGGG+TGG | - | tig0018912:98887-98906 | Msa1369810:CDS | 50.0% | |
| TGAAAAGTGGGAAAAGGGGG+TGG | - | tig0018912:99228-99247 | Msa1369810:CDS | 50.0% | |
| GAAAAGTGGGAAAAGGGGGT+GGG | - | tig0018912:99229-99248 | Msa1369810:CDS | 50.0% | |
| ! | ATGGTTTGCAGGTGTAGGCA+TGG | - | tig0018912:99392-99411 | Msa1369810:CDS | 50.0% |
| TTTACACCATCAGGAGCAGG+AGG | - | tig0018912:99807-99826 | Msa1369810:CDS | 50.0% | |
| GGTACAATAACGACTGGTGC+TGG | - | tig0018912:99888-99907 | Msa1369810:CDS | 50.0% | |
| GAGACAGTTGTTTGCTCGAG+GGG | + | tig0018912:99954-99973 | None:intergenic | 50.0% | |
| CAGAGACAGTTGTTTGCTCG+AGG | + | tig0018912:99956-99975 | None:intergenic | 50.0% | |
| GAGCAAACAACTGTCTCTGC+AGG | - | tig0018912:99957-99976 | Msa1369810:intron | 50.0% | |
| AAACAACTGTCTCTGCAGGC+TGG | - | tig0018912:99961-99980 | Msa1369810:intron | 50.0% | |
| AGGGTCTTGAAGAGGTGAAG+AGG | + | tig0018912:98115-98134 | None:intergenic | 50.0% | |
| ! | AACTTGGGGTACCTCTCATG+TGG | - | tig0018912:98396-98415 | Msa1369810:CDS | 50.0% |
| GGTTTCCACTTCCACATGAG+AGG | + | tig0018912:98410-98429 | None:intergenic | 50.0% | |
| ! | TTGGAGGTGTGACCCAAACT+GGG | - | tig0018912:98443-98462 | Msa1369810:CDS | 50.0% |
| ! | GGGTTCGGTAAGAATGCCAT+TGG | - | tig0018912:98501-98520 | Msa1369810:CDS | 50.0% |
| ! | AGATTCTGGTGACGACGATC+CGG | - | tig0018912:98554-98573 | Msa1369810:CDS | 50.0% |
| !!! | AAACGAAGGGTACCGGGTTT+TGG | + | tig0018912:98585-98604 | None:intergenic | 50.0% |
| CTTGAATCACGGCGAAACGA+AGG | + | tig0018912:98599-98618 | None:intergenic | 50.0% | |
| GGAGCTAGTGTTCACATTGC+TGG | - | tig0018912:98711-98730 | Msa1369810:intron | 50.0% | |
| GCTAGTGTTCACATTGCTGG+TGG | - | tig0018912:98714-98733 | Msa1369810:intron | 50.0% | |
| TCTCCACCCATAATGTCCTG+GGG | + | tig0018912:98835-98854 | None:intergenic | 50.0% | |
| GTTCTCCACCCATAATGTCC+TGG | + | tig0018912:98837-98856 | None:intergenic | 50.0% | |
| GGGTGGAGAACAGTATCAGA+CGG | - | tig0018912:98846-98865 | Msa1369810:CDS | 50.0% | |
| TGGTGGAAGTCATGTTTGGG+TGG | - | tig0018912:98887-98906 | Msa1369810:CDS | 50.0% | |
| TGAAAAGTGGGAAAAGGGGG+TGG | - | tig0018912:99228-99247 | Msa1369810:CDS | 50.0% | |
| GAAAAGTGGGAAAAGGGGGT+GGG | - | tig0018912:99229-99248 | Msa1369810:CDS | 50.0% | |
| ! | ATGGTTTGCAGGTGTAGGCA+TGG | - | tig0018912:99392-99411 | Msa1369810:CDS | 50.0% |
| TTTACACCATCAGGAGCAGG+AGG | - | tig0018912:99807-99826 | Msa1369810:CDS | 50.0% | |
| GGTACAATAACGACTGGTGC+TGG | - | tig0018912:99888-99907 | Msa1369810:CDS | 50.0% | |
| GAGACAGTTGTTTGCTCGAG+GGG | + | tig0018912:99954-99973 | None:intergenic | 50.0% | |
| CAGAGACAGTTGTTTGCTCG+AGG | + | tig0018912:99956-99975 | None:intergenic | 50.0% | |
| GAGCAAACAACTGTCTCTGC+AGG | - | tig0018912:99957-99976 | Msa1369810:intron | 50.0% | |
| AAACAACTGTCTCTGCAGGC+TGG | - | tig0018912:99961-99980 | Msa1369810:intron | 50.0% | |
| GGGTACCTCTCATGTGGAAG+TGG | - | tig0018912:98402-98421 | Msa1369810:CDS | 55.0% | |
| ! | GTTGGAGGTGTGACCCAAAC+TGG | - | tig0018912:98442-98461 | Msa1369810:CDS | 55.0% |
| GATCCGGTGACACCAAAACC+CGG | - | tig0018912:98570-98589 | Msa1369810:CDS | 55.0% | |
| !!! | GTACCGGGTTTTGGTGTCAC+CGG | + | tig0018912:98576-98595 | None:intergenic | 55.0% |
| AAGGTGGGAATGCCATGGTG+AGG | - | tig0018912:98805-98824 | Msa1369810:CDS | 55.0% | |
| AGGTGGGAATGCCATGGTGA+GGG | - | tig0018912:98806-98825 | Msa1369810:CDS | 55.0% | |
| AGGGACTCCCCAGGACATTA+TGG | - | tig0018912:98825-98844 | Msa1369810:CDS | 55.0% | |
| GGGACTCCCCAGGACATTAT+GGG | - | tig0018912:98826-98845 | Msa1369810:CDS | 55.0% | |
| ACTCCCCAGGACATTATGGG+TGG | - | tig0018912:98829-98848 | Msa1369810:CDS | 55.0% | |
| AGGATGCGCCAGAAGGTGAA+TGG | - | tig0018912:99733-99752 | Msa1369810:CDS | 55.0% | |
| GCGCCAGAAGGTGAATGGAA+AGG | - | tig0018912:99738-99757 | Msa1369810:CDS | 55.0% | |
| !! | ACGACTGGTGCTGGTGTACT+TGG | - | tig0018912:99897-99916 | Msa1369810:CDS | 55.0% |
| GGGTACCTCTCATGTGGAAG+TGG | - | tig0018912:98402-98421 | Msa1369810:CDS | 55.0% | |
| ! | GTTGGAGGTGTGACCCAAAC+TGG | - | tig0018912:98442-98461 | Msa1369810:CDS | 55.0% |
| GATCCGGTGACACCAAAACC+CGG | - | tig0018912:98570-98589 | Msa1369810:CDS | 55.0% | |
| !!! | GTACCGGGTTTTGGTGTCAC+CGG | + | tig0018912:98576-98595 | None:intergenic | 55.0% |
| AAGGTGGGAATGCCATGGTG+AGG | - | tig0018912:98805-98824 | Msa1369810:CDS | 55.0% | |
| AGGTGGGAATGCCATGGTGA+GGG | - | tig0018912:98806-98825 | Msa1369810:CDS | 55.0% | |
| AGGGACTCCCCAGGACATTA+TGG | - | tig0018912:98825-98844 | Msa1369810:CDS | 55.0% | |
| GGGACTCCCCAGGACATTAT+GGG | - | tig0018912:98826-98845 | Msa1369810:CDS | 55.0% | |
| ACTCCCCAGGACATTATGGG+TGG | - | tig0018912:98829-98848 | Msa1369810:CDS | 55.0% | |
| AGGATGCGCCAGAAGGTGAA+TGG | - | tig0018912:99733-99752 | Msa1369810:CDS | 55.0% | |
| GCGCCAGAAGGTGAATGGAA+AGG | - | tig0018912:99738-99757 | Msa1369810:CDS | 55.0% | |
| !! | ACGACTGGTGCTGGTGTACT+TGG | - | tig0018912:99897-99916 | Msa1369810:CDS | 55.0% |
| !! | ACGGCGAAACGAAGGGTACC+GGG | + | tig0018912:98591-98610 | None:intergenic | 60.0% |
| ! | CACGGCGAAACGAAGGGTAC+CGG | + | tig0018912:98592-98611 | None:intergenic | 60.0% |
| AAGCACGAGGATGCGCCAGA+AGG | - | tig0018912:99726-99745 | Msa1369810:CDS | 60.0% | |
| GATGCTCCTCCTGCTCCTGA+TGG | + | tig0018912:99816-99835 | None:intergenic | 60.0% | |
| !! | ACGGCGAAACGAAGGGTACC+GGG | + | tig0018912:98591-98610 | None:intergenic | 60.0% |
| ! | CACGGCGAAACGAAGGGTAC+CGG | + | tig0018912:98592-98611 | None:intergenic | 60.0% |
| AAGCACGAGGATGCGCCAGA+AGG | - | tig0018912:99726-99745 | Msa1369810:CDS | 60.0% | |
| GATGCTCCTCCTGCTCCTGA+TGG | + | tig0018912:99816-99835 | None:intergenic | 60.0% | |
| TCCTGGGGAGTCCCTCACCA+TGG | + | tig0018912:98820-98839 | None:intergenic | 65.0% | |
| TCCTGGGGAGTCCCTCACCA+TGG | + | tig0018912:98820-98839 | None:intergenic | 65.0% | |
| GCCATGGTGAGGGACTCCCC+AGG | - | tig0018912:98816-98835 | Msa1369810:CDS | 70.0% | |
| GCCATGGTGAGGGACTCCCC+AGG | - | tig0018912:98816-98835 | Msa1369810:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018912 | gene | 98014 | 100307 | 98014 | ID=Msa1369810;Name=Msa1369810 |
| tig0018912 | mRNA | 98014 | 100307 | 98014 | ID=Msa1369810-mRNA-1;Parent=Msa1369810;Name=Msa1369810-mRNA-1;_AED=0.03;_eAED=0.03;_QI=34|1|1|1|1|1|4|363|407 |
| tig0018912 | exon | 98014 | 98601 | 98014 | ID=Msa1369810-mRNA-1:exon:1405;Parent=Msa1369810-mRNA-1 |
| tig0018912 | exon | 98780 | 98918 | 98780 | ID=Msa1369810-mRNA-1:exon:1404;Parent=Msa1369810-mRNA-1 |
| tig0018912 | exon | 99207 | 99953 | 99207 | ID=Msa1369810-mRNA-1:exon:1403;Parent=Msa1369810-mRNA-1 |
| tig0018912 | exon | 100161 | 100307 | 100161 | ID=Msa1369810-mRNA-1:exon:1402;Parent=Msa1369810-mRNA-1 |
| tig0018912 | five_prime_UTR | 100274 | 100307 | 100274 | ID=Msa1369810-mRNA-1:five_prime_utr;Parent=Msa1369810-mRNA-1 |
| tig0018912 | CDS | 100161 | 100273 | 100161 | ID=Msa1369810-mRNA-1:cds;Parent=Msa1369810-mRNA-1 |
| tig0018912 | CDS | 99207 | 99953 | 99207 | ID=Msa1369810-mRNA-1:cds;Parent=Msa1369810-mRNA-1 |
| tig0018912 | CDS | 98780 | 98918 | 98780 | ID=Msa1369810-mRNA-1:cds;Parent=Msa1369810-mRNA-1 |
| tig0018912 | CDS | 98377 | 98601 | 98377 | ID=Msa1369810-mRNA-1:cds;Parent=Msa1369810-mRNA-1 |
| tig0018912 | three_prime_UTR | 98014 | 98376 | 98014 | ID=Msa1369810-mRNA-1:three_prime_utr;Parent=Msa1369810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
