Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208560 | sp|Q94BN0|BT2_ARATH | 61.515 | 330 | 114 | 6 | 15 | 332 | 32 | 360 | 2.00e-132 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208560 | G7JMM8 | 97.796 | 363 | 7 | 1 | 1 | 363 | 1 | 362 | 0.0 | 744 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1208560 | TR | TAZ |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1208560 | Msa1258870 | 0.930443 | 1.626524e-93 | -8.615850e-47 |
| Msa1208560 | Msa1330140 | 0.982044 | 4.337163e-154 | -8.615850e-47 |
| Msa1208560 | Msa1330150 | 0.984525 | 8.166343e-161 | -8.615850e-47 |
| Msa1208560 | Msa1330200 | 0.989009 | 2.582209e-176 | -8.615850e-47 |
| Msa1208560 | Msa1369800 | 0.988916 | 6.236413e-176 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208560 | MtrunA17_Chr4g0058071 | 97.796 | 363 | 7 | 1 | 1 | 363 | 1 | 362 | 0.0 | 744 |
| Msa1208560 | MtrunA17_Chr3g0116501 | 58.621 | 203 | 81 | 2 | 87 | 289 | 1 | 200 | 1.57e-86 | 260 |
| Msa1208560 | MtrunA17_Chr5g0401281 | 45.973 | 298 | 154 | 7 | 18 | 313 | 68 | 360 | 1.56e-84 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208560 | AT3G48360.1 | 61.515 | 330 | 114 | 6 | 15 | 332 | 32 | 360 | 2.03e-133 | 385 |
| Msa1208560 | AT5G63160.1 | 62.540 | 315 | 108 | 5 | 14 | 319 | 22 | 335 | 2.64e-130 | 377 |
| Msa1208560 | AT3G48360.2 | 63.636 | 286 | 92 | 5 | 15 | 289 | 32 | 316 | 3.39e-120 | 351 |
| Msa1208560 | AT5G63160.2 | 63.732 | 284 | 94 | 4 | 14 | 289 | 22 | 304 | 3.16e-119 | 347 |
| Msa1208560 | AT5G63160.3 | 64.634 | 246 | 79 | 4 | 81 | 319 | 6 | 250 | 8.10e-104 | 307 |
| Msa1208560 | AT3G48360.3 | 62.745 | 255 | 85 | 4 | 87 | 332 | 1 | 254 | 1.59e-103 | 305 |
| Msa1208560 | AT5G67480.1 | 45.364 | 302 | 159 | 6 | 18 | 317 | 61 | 358 | 7.24e-83 | 257 |
| Msa1208560 | AT5G67480.3 | 45.364 | 302 | 159 | 6 | 18 | 317 | 61 | 358 | 7.24e-83 | 257 |
| Msa1208560 | AT5G67480.2 | 45.364 | 302 | 159 | 6 | 18 | 317 | 72 | 369 | 9.61e-83 | 257 |
| Msa1208560 | AT4G37610.1 | 42.904 | 303 | 164 | 8 | 18 | 317 | 56 | 352 | 6.86e-76 | 239 |
| Msa1208560 | AT1G05690.1 | 41.528 | 301 | 170 | 5 | 18 | 317 | 55 | 350 | 1.82e-74 | 235 |
| Msa1208560 | AT1G55760.1 | 33.835 | 133 | 79 | 4 | 18 | 147 | 165 | 291 | 6.35e-13 | 69.3 |
| Msa1208560 | AT3G56230.1 | 24.845 | 161 | 120 | 1 | 25 | 184 | 120 | 280 | 2.11e-12 | 67.4 |
Find 116 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGGGGTGGTCTTATTTA+AGG | 0.172362 | 8_1:-66747320 | None:intergenic |
| TGGAAGGAACGCCGTGAATT+TGG | 0.203367 | 8_1:-66747718 | None:intergenic |
| CTTGCAATGTTCCTCTTTGC+AGG | 0.245278 | 8_1:+66748631 | Msa1208560:CDS |
| TGCCCTCTCATAAGATTCTA+AGG | 0.266164 | 8_1:+66751328 | Msa1208560:three_prime_UTR |
| CCTTGCTAGTAGTTTCCATT+TGG | 0.271352 | 8_1:-66750992 | None:intergenic |
| GTGAATTTGGATTATTCTTT+CGG | 0.293435 | 8_1:-66747705 | None:intergenic |
| ATGAATAAAGACATCATATT+CGG | 0.296060 | 8_1:-66747483 | None:intergenic |
| TTTGCTTGAAATGTAAATTT+TGG | 0.310791 | 8_1:+66751272 | Msa1208560:three_prime_UTR |
| TTATAAATTTAGTGATTATT+CGG | 0.311689 | 8_1:+66751427 | Msa1208560:three_prime_UTR |
| TTCTGAGGCGATGGAGTGTT+TGG | 0.329039 | 8_1:+66748386 | Msa1208560:CDS |
| ACTTGATATCCTCCGCTTCA+TGG | 0.330110 | 8_1:+66748135 | Msa1208560:CDS |
| GACCTCCATTGGTGTGGTTT+GGG | 0.335478 | 8_1:-66747453 | None:intergenic |
| AAGGTTATTGTTAGTGTTAG+TGG | 0.335935 | 8_1:+66751218 | Msa1208560:three_prime_UTR |
| CTTGCTAGTAGTTTCCATTT+GGG | 0.348881 | 8_1:-66750991 | None:intergenic |
| AATCGTGGGATCAGATGTTT+TGG | 0.358065 | 8_1:+66751096 | Msa1208560:CDS |
| ATTTAAGGAAGGGAAGATAT+TGG | 0.363883 | 8_1:-66747305 | None:intergenic |
| CGACCTCCATTGGTGTGGTT+TGG | 0.364602 | 8_1:-66747454 | None:intergenic |
| TGCAAGAATCATCAGTTTGT+TGG | 0.365276 | 8_1:-66748614 | None:intergenic |
| TCTGATCCCACGATTGTCTA+TGG | 0.399851 | 8_1:-66751088 | None:intergenic |
| TCAATAATGTTCTCGAAAAC+AGG | 0.405232 | 8_1:-66747659 | None:intergenic |
| CAGTTGCACGGAGGATGAAA+TGG | 0.408781 | 8_1:+66747865 | Msa1208560:intron |
| AGAGGGTGAAGGGAGGCTGC+TGG | 0.412837 | 8_1:+66748544 | Msa1208560:CDS |
| AGGAGAATTATTGTGATGTT+TGG | 0.418373 | 8_1:-66747400 | None:intergenic |
| ACCAGGATGCTTGTGTGGGC+TGG | 0.439380 | 8_1:-66747527 | None:intergenic |
| TTCAAGCACAGGATCATGTT+TGG | 0.441776 | 8_1:-66748113 | None:intergenic |
| CGCCAGGCTCTGCGATGCAC+CGG | 0.448288 | 8_1:+66748012 | Msa1208560:CDS |
| CAGACAATTTCAATTGAGAA+TGG | 0.449145 | 8_1:+66750945 | Msa1208560:intron |
| CATGTGTTGTAGATTGAAAG+AGG | 0.450361 | 8_1:-66747420 | None:intergenic |
| TGAATAAAGACATCATATTC+GGG | 0.450560 | 8_1:-66747482 | None:intergenic |
| TTATTAACCTCAACATGGTA+TGG | 0.459852 | 8_1:-66748444 | None:intergenic |
| TTGAACCGCGTTGAAGTGAT+TGG | 0.469408 | 8_1:-66748065 | None:intergenic |
| TGAGAATGGAGCAAGAGAAA+AGG | 0.470643 | 8_1:+66750959 | Msa1208560:CDS |
| GTCTTTATTCATACTTCTGA+TGG | 0.471148 | 8_1:+66747494 | Msa1208560:CDS |
| GATGAAAGCGGTTACGGCGG+TGG | 0.476910 | 8_1:-66747738 | None:intergenic |
| GTAGCCGATGAAAGCGGTTA+CGG | 0.477754 | 8_1:-66747744 | None:intergenic |
| AGCAAATTCTCCACCTGTCA+AGG | 0.481574 | 8_1:+66748483 | Msa1208560:CDS |
| TGTTAGTGGCTCTTCAATTG+AGG | 0.489370 | 8_1:+66751232 | Msa1208560:three_prime_UTR |
| AAAGGAAAGATGATCCCAAA+TGG | 0.490170 | 8_1:+66750977 | Msa1208560:CDS |
| CAGAAGCTGAAGCCCTTGAC+AGG | 0.502805 | 8_1:-66748496 | None:intergenic |
| AACTAACCAGGATGCTTGTG+TGG | 0.507204 | 8_1:-66747532 | None:intergenic |
| CTCTTTCAATCTACAACACA+TGG | 0.509417 | 8_1:+66747421 | Msa1208560:exon |
| CATCGCAGAGCCTGGCGAGT+TGG | 0.510849 | 8_1:-66748006 | None:intergenic |
| GGGTTTCAATTGTGTACGTA+AGG | 0.511616 | 8_1:+66751199 | Msa1208560:three_prime_UTR |
| TGCGGAACTTTCTGAGGCGA+TGG | 0.528118 | 8_1:+66748377 | Msa1208560:CDS |
| TCGGCTACCTCTACTCATCC+AGG | 0.528548 | 8_1:+66747759 | Msa1208560:CDS |
| TATAGAGGAGAGAGAAATCG+AGG | 0.529791 | 8_1:+66748328 | Msa1208560:intron |
| GAAAGAATAATCCAAATTCA+CGG | 0.535992 | 8_1:+66747707 | Msa1208560:CDS |
| TCCAGCCCACACAAGCATCC+TGG | 0.542058 | 8_1:+66747526 | Msa1208560:CDS |
| CTCAAACAAAGATGCATCAA+AGG | 0.544591 | 8_1:+66747941 | Msa1208560:CDS |
| CCTTAAATAAGACCACCCCT+TGG | 0.544636 | 8_1:+66747320 | Msa1208560:five_prime_UTR |
| TCGGGTAAGACGACCTCCAT+TGG | 0.548298 | 8_1:-66747464 | None:intergenic |
| GTGTTTGGAGCATATATGTA+CGG | 0.548333 | 8_1:+66748401 | Msa1208560:CDS |
| GAGGATGAAATGGACAAATA+CGG | 0.550313 | 8_1:+66747875 | Msa1208560:CDS |
| ACCGCCGTAACCGCTTTCAT+CGG | 0.550954 | 8_1:+66747740 | Msa1208560:CDS |
| ACACGTGAGATAGTGCCAAC+AGG | 0.553618 | 8_1:-66747904 | None:intergenic |
| ACATGCAAGAAGAGGGTGAA+GGG | 0.559984 | 8_1:+66748534 | Msa1208560:CDS |
| ATGGAAACTACTAGCAAGGA+AGG | 0.562140 | 8_1:+66750996 | Msa1208560:CDS |
| TGGATGTACTCCAACTCGCC+AGG | 0.562979 | 8_1:+66747996 | Msa1208560:CDS |
| CGCTTTCGTCCATGAAGCGG+AGG | 0.563948 | 8_1:-66748144 | None:intergenic |
| ATGCATCTTTGTTTGAGTTG+CGG | 0.567744 | 8_1:-66747935 | None:intergenic |
| GGGTGAAGGGAGGCTGCTGG+AGG | 0.568462 | 8_1:+66748547 | Msa1208560:CDS |
| TTTCGCTTTCGTCCATGAAG+CGG | 0.570395 | 8_1:-66748147 | None:intergenic |
| AAAGCGGTTACGGCGGTGGA+AGG | 0.571422 | 8_1:-66747734 | None:intergenic |
| GATGATGATTCTGAGATCCA+AGG | 0.572696 | 8_1:-66747337 | None:intergenic |
| GCATCAAAGGTCTTGTTCAA+CGG | 0.574251 | 8_1:+66747954 | Msa1208560:CDS |
| CAAATACGGAATCCACCTGT+TGG | 0.576636 | 8_1:+66747889 | Msa1208560:CDS |
| GGGGTGGTCTTATTTAAGGA+AGG | 0.576906 | 8_1:-66747316 | None:intergenic |
| AAGGAAGGTTGCCTCAGCTA+AGG | 0.578016 | 8_1:+66751011 | Msa1208560:CDS |
| CCAAATGGAAACTACTAGCA+AGG | 0.585999 | 8_1:+66750992 | Msa1208560:CDS |
| CTCCTTAGAATCTTATGAGA+GGG | 0.589078 | 8_1:-66751330 | None:intergenic |
| TTGGAGCATATATGTACGGA+AGG | 0.591498 | 8_1:+66748405 | Msa1208560:CDS |
| AGGATATCAAGTTCAAGCAC+AGG | 0.591612 | 8_1:-66748124 | None:intergenic |
| GGAAGCATAGAGAGGAGCAA+GGG | 0.591806 | 8_1:+66748349 | Msa1208560:CDS |
| ATACAACGGATACGGAGATC+CGG | 0.598941 | 8_1:-66748031 | None:intergenic |
| GGGTGGTCTTATTTAAGGAA+GGG | 0.601245 | 8_1:-66747315 | None:intergenic |
| GCAAATTCTCCACCTGTCAA+GGG | 0.602836 | 8_1:+66748484 | Msa1208560:CDS |
| GTTGTATGCGGAACTTTCTG+AGG | 0.605270 | 8_1:+66748371 | Msa1208560:CDS |
| GTAGCTTCATACAACGGATA+CGG | 0.605346 | 8_1:-66748039 | None:intergenic |
| GAATACCCAAACCACACCAA+TGG | 0.607266 | 8_1:+66747448 | Msa1208560:CDS |
| TCGGAGCTGCGTTGTTTACG+CGG | 0.613669 | 8_1:-66747686 | None:intergenic |
| AAGCTGAAGCCCTTGACAGG+TGG | 0.613763 | 8_1:-66748493 | None:intergenic |
| AGGAAGCATAGAGAGGAGCA+AGG | 0.616562 | 8_1:+66748348 | Msa1208560:CDS |
| TAAACAACTAACCTGCAAAG+AGG | 0.620623 | 8_1:-66748642 | None:intergenic |
| ATGATGATTCTGAGATCCAA+GGG | 0.622801 | 8_1:-66747336 | None:intergenic |
| CCTCCTTAGAATCTTATGAG+AGG | 0.623054 | 8_1:-66751331 | None:intergenic |
| CAGGTGGAGAATTTGCTACA+CGG | 0.624063 | 8_1:-66748477 | None:intergenic |
| CGTTGGACCATACCATGTTG+AGG | 0.625619 | 8_1:+66748437 | Msa1208560:CDS |
| TACCCAAACCACACCAATGG+AGG | 0.626720 | 8_1:+66747451 | Msa1208560:CDS |
| TAAGACGACCTCCATTGGTG+TGG | 0.627752 | 8_1:-66747459 | None:intergenic |
| TCTTATGAGAGGGCAAAATG+AGG | 0.633014 | 8_1:-66751320 | None:intergenic |
| CTACAAACCTGGATGAGTAG+AGG | 0.636623 | 8_1:-66747766 | None:intergenic |
| ATATTGTAACAATAATGTCT+CGG | 0.638704 | 8_1:+66751128 | Msa1208560:CDS |
| GCTGGAGGTGCAAACGTATG+TGG | 0.643612 | 8_1:+66748562 | Msa1208560:CDS |
| TTTCTTTATTAACCTCAACA+TGG | 0.646312 | 8_1:-66748449 | None:intergenic |
| GAAATCGAGGAAGCATAGAG+AGG | 0.652687 | 8_1:+66748341 | Msa1208560:CDS |
| GCACAGGATCATGTTTGGTG+AGG | 0.659496 | 8_1:-66748108 | None:intergenic |
| GAGTGACCATAGACAATCGT+GGG | 0.660262 | 8_1:+66751082 | Msa1208560:CDS |
| GCCGATGAAAGCGGTTACGG+CGG | 0.661788 | 8_1:-66747741 | None:intergenic |
| TGCAAGAAGAGGGTGAAGGG+AGG | 0.663791 | 8_1:+66748537 | Msa1208560:CDS |
| CGTGAGATAGTGCCAACAGG+TGG | 0.667055 | 8_1:-66747901 | None:intergenic |
| GGAAAACATAACCTTAGCTG+AGG | 0.673989 | 8_1:-66751022 | None:intergenic |
| GTAGAGGTAGCCGATGAAAG+CGG | 0.674697 | 8_1:-66747750 | None:intergenic |
| AACATGCAAGAAGAGGGTGA+AGG | 0.677915 | 8_1:+66748533 | Msa1208560:CDS |
| TGGAGCATATATGTACGGAA+GGG | 0.681205 | 8_1:+66748406 | Msa1208560:CDS |
| CCTCTCATAAGATTCTAAGG+AGG | 0.681421 | 8_1:+66751331 | Msa1208560:three_prime_UTR |
| AGAGGAGCAAGGGTTGTATG+CGG | 0.686478 | 8_1:+66748359 | Msa1208560:CDS |
| TGGTGAGTAGCTTCATACAA+CGG | 0.689964 | 8_1:-66748045 | None:intergenic |
| TGATTCTGAGATCCAAGGGG+TGG | 0.690981 | 8_1:-66747332 | None:intergenic |
| ACTAACCAGGATGCTTGTGT+GGG | 0.692654 | 8_1:-66747531 | None:intergenic |
| CTCGAAAACAGGAGATACCG+AGG | 0.700797 | 8_1:-66747648 | None:intergenic |
| AGAGTGACCATAGACAATCG+TGG | 0.708473 | 8_1:+66751081 | Msa1208560:CDS |
| ACGGTTAACATCAGAAAACG+TGG | 0.721632 | 8_1:+66747973 | Msa1208560:CDS |
| AACATGGTATGGTCCAACGT+CGG | 0.721753 | 8_1:-66748433 | None:intergenic |
| GTTAACATCAGAAAACGTGG+TGG | 0.747454 | 8_1:+66747976 | Msa1208560:CDS |
| TGATGATTCTGAGATCCAAG+GGG | 0.809821 | 8_1:-66747335 | None:intergenic |
| ACTCACCAATCACTTCAACG+CGG | 0.835800 | 8_1:+66748060 | Msa1208560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATATAAGGAATTTTTTT+AGG | + | chr8_1:66749072-66749091 | Msa1208560:intron | 10.0% |
| !!! | AAATATAAGGAATTTTTTTA+GGG | + | chr8_1:66749073-66749092 | Msa1208560:intron | 10.0% |
| !!! | ATTTATTTTATATTTGAGAT+TGG | + | chr8_1:66749398-66749417 | Msa1208560:intron | 10.0% |
| !! | TACAATATACAATAAATTAA+CGG | - | chr8_1:66750284-66750303 | None:intergenic | 10.0% |
| !! | TATATTGTATATTTGTATAT+GGG | + | chr8_1:66750295-66750314 | Msa1208560:intron | 10.0% |
| !!! | AGATATTTATTAATTTTGAT+GGG | - | chr8_1:66750778-66750797 | None:intergenic | 10.0% |
| !!! | TAGATATTTATTAATTTTGA+TGG | - | chr8_1:66750779-66750798 | None:intergenic | 10.0% |
| !!! | AAATAATTAAGCTATTTTTT+TGG | + | chr8_1:66750915-66750934 | Msa1208560:intron | 10.0% |
| !! | TTATAAATTTAGTGATTATT+CGG | + | chr8_1:66751427-66751446 | Msa1208560:three_prime_UTR | 10.0% |
| !! | ATAATCATGGAATTAATTAA+AGG | + | chr8_1:66748783-66748802 | Msa1208560:intron | 15.0% |
| !! | TAATCATGGAATTAATTAAA+GGG | + | chr8_1:66748784-66748803 | Msa1208560:intron | 15.0% |
| !! | ATAATATATTAATTGCATCT+TGG | + | chr8_1:66749136-66749155 | Msa1208560:intron | 15.0% |
| !!! | AATTTCATTTTTGTTTAGAT+GGG | + | chr8_1:66749629-66749648 | Msa1208560:intron | 15.0% |
| !! | CATTAATTATTTCATAATCA+AGG | - | chr8_1:66750039-66750058 | None:intergenic | 15.0% |
| !!! | ATGTTCAAATATTCTTTTTT+AGG | - | chr8_1:66750127-66750146 | None:intergenic | 15.0% |
| !! | GTATATTGTATATTTGTATA+TGG | + | chr8_1:66750294-66750313 | Msa1208560:intron | 15.0% |
| !! | ATATTGTATATTTGTATATG+GGG | + | chr8_1:66750296-66750315 | Msa1208560:intron | 15.0% |
| !!! | TTTTTAGAGTTTATGGTTTT+GGG | - | chr8_1:66747377-66747396 | None:intergenic | 20.0% |
| !!! | TTTTTTAGAGTTTATGGTTT+TGG | - | chr8_1:66747378-66747397 | None:intergenic | 20.0% |
| !! | ATGAATAAAGACATCATATT+CGG | - | chr8_1:66747486-66747505 | None:intergenic | 20.0% |
| !! | TTAAGAAAAATACGAACAAT+TGG | - | chr8_1:66747563-66747582 | None:intergenic | 20.0% |
| !! | GTTGTAAATCAATAATTAAC+AGG | + | chr8_1:66747625-66747644 | Msa1208560:intron | 20.0% |
| !! | TGATTATTATTGTGTTATAG+AGG | + | chr8_1:66748313-66748332 | Msa1208560:intron | 20.0% |
| !! | TTATTTCGGTCATAAATATA+AGG | + | chr8_1:66749060-66749079 | Msa1208560:intron | 20.0% |
| !!! | TATTTTATATTTGAGATTGG+AGG | + | chr8_1:66749401-66749420 | Msa1208560:intron | 20.0% |
| !!! | CAATTTCATTTTTGTTTAGA+TGG | + | chr8_1:66749628-66749647 | Msa1208560:intron | 20.0% |
| !!! | TAAGTCTCTTGATATTTTTA+GGG | + | chr8_1:66750389-66750408 | Msa1208560:intron | 20.0% |
| !!! | CTAATTTTATAGAGATGAAT+CGG | + | chr8_1:66750625-66750644 | Msa1208560:intron | 20.0% |
| !! | ATATTGTAACAATAATGTCT+CGG | + | chr8_1:66751128-66751147 | Msa1208560:CDS | 20.0% |
| !!! | TTTGCTTGAAATGTAAATTT+TGG | + | chr8_1:66751272-66751291 | Msa1208560:three_prime_UTR | 20.0% |
| !!! | TTGGTGTTTTTTAGAGTTTA+TGG | - | chr8_1:66747384-66747403 | None:intergenic | 25.0% |
| ! | TGAATAAAGACATCATATTC+GGG | - | chr8_1:66747485-66747504 | None:intergenic | 25.0% |
| !! | TGTTCGTATTTTTCTTAACT+CGG | + | chr8_1:66747565-66747584 | Msa1208560:intron | 25.0% |
| ! | GTGAATTTGGATTATTCTTT+CGG | - | chr8_1:66747708-66747727 | None:intergenic | 25.0% |
| ! | GAAAGAATAATCCAAATTCA+CGG | + | chr8_1:66747707-66747726 | Msa1208560:CDS | 25.0% |
| ! | TTTCTTTATTAACCTCAACA+TGG | - | chr8_1:66748452-66748471 | None:intergenic | 25.0% |
| !! | AGCTCTAACAAAAGATTATA+AGG | - | chr8_1:66748726-66748745 | None:intergenic | 25.0% |
| ! | AGAATAGTACATCATAATCA+TGG | + | chr8_1:66748770-66748789 | Msa1208560:intron | 25.0% |
| !!! | TGTTGTTGCGATTTTTATTT+CGG | + | chr8_1:66749046-66749065 | Msa1208560:intron | 25.0% |
| ! | AAAGCTGATGTATTTGATTA+AGG | + | chr8_1:66749357-66749376 | Msa1208560:intron | 25.0% |
| !!! | TTTTGTTTAGATGGGTAAAA+TGG | + | chr8_1:66749637-66749656 | Msa1208560:intron | 25.0% |
| !!! | AGAAACTATTTTGACCAAAA+TGG | - | chr8_1:66749686-66749705 | None:intergenic | 25.0% |
| ! | TTTCTCGAGAAATTCTAATA+TGG | - | chr8_1:66749950-66749969 | None:intergenic | 25.0% |
| ! | TGAACATTGCAATATTTGAT+TGG | - | chr8_1:66750323-66750342 | None:intergenic | 25.0% |
| !! | CTAAGTCTCTTGATATTTTT+AGG | + | chr8_1:66750388-66750407 | Msa1208560:intron | 25.0% |
| ! | AAGGTAGCTAATAATAACTT+GGG | - | chr8_1:66750696-66750715 | None:intergenic | 25.0% |
| !!! | TGCCTTATCTTATTTTGAAA+AGG | + | chr8_1:66751177-66751196 | Msa1208560:three_prime_UTR | 25.0% |
| !!! | GCCTTATCTTATTTTGAAAA+GGG | + | chr8_1:66751178-66751197 | Msa1208560:three_prime_UTR | 25.0% |
| !!! | CCTTATCTTATTTTGAAAAG+GGG | + | chr8_1:66751179-66751198 | Msa1208560:three_prime_UTR | 25.0% |
| ATTTAAGGAAGGGAAGATAT+TGG | - | chr8_1:66747308-66747327 | None:intergenic | 30.0% | |
| AGGAGAATTATTGTGATGTT+TGG | - | chr8_1:66747403-66747422 | None:intergenic | 30.0% | |
| GTCTTTATTCATACTTCTGA+TGG | + | chr8_1:66747494-66747513 | Msa1208560:CDS | 30.0% | |
| ATAATCGTTAGTCCTTGAAT+CGG | - | chr8_1:66747594-66747613 | None:intergenic | 30.0% | |
| AATCAATAATTAACAGGCCT+CGG | + | chr8_1:66747631-66747650 | Msa1208560:intron | 30.0% | |
| TCAATAATGTTCTCGAAAAC+AGG | - | chr8_1:66747662-66747681 | None:intergenic | 30.0% | |
| ATATACAAGTACTACAAACC+TGG | - | chr8_1:66747780-66747799 | None:intergenic | 30.0% | |
| TTATTAACCTCAACATGGTA+TGG | - | chr8_1:66748447-66748466 | None:intergenic | 30.0% | |
| AATCGCAACAACATTTGTAT+GGG | - | chr8_1:66749039-66749058 | None:intergenic | 30.0% | |
| AAATCGCAACAACATTTGTA+TGG | - | chr8_1:66749040-66749059 | None:intergenic | 30.0% | |
| GTTACACTGTTATGCTTATT+AGG | + | chr8_1:66749211-66749230 | Msa1208560:intron | 30.0% | |
| GATCGATTGTTACTCTTAAA+CGG | + | chr8_1:66749437-66749456 | Msa1208560:intron | 30.0% | |
| AAAACATACCTATTCTTCCA+TGG | + | chr8_1:66749773-66749792 | Msa1208560:intron | 30.0% | |
| AAGACCAAGTAAATAGTCTT+TGG | + | chr8_1:66749800-66749819 | Msa1208560:intron | 30.0% | |
| GAAAACATAGCGAATTTATC+TGG | + | chr8_1:66749966-66749985 | Msa1208560:intron | 30.0% | |
| CCACTAAGAACAAAATCTAA+CGG | - | chr8_1:66750003-66750022 | None:intergenic | 30.0% | |
| ATATATTGCTACCTGATCAA+CGG | - | chr8_1:66750232-66750251 | None:intergenic | 30.0% | |
| AATATCAAGAGACTTAGCTA+GGG | - | chr8_1:66750385-66750404 | None:intergenic | 30.0% | |
| AAATATCAAGAGACTTAGCT+AGG | - | chr8_1:66750386-66750405 | None:intergenic | 30.0% | |
| !!! | CTCTTGATATTTTTAGGGAT+TGG | + | chr8_1:66750394-66750413 | Msa1208560:intron | 30.0% |
| ! | TAATTATTGACTACGATCGA+TGG | - | chr8_1:66750446-66750465 | None:intergenic | 30.0% |
| GAAGGTAGCTAATAATAACT+TGG | - | chr8_1:66750697-66750716 | None:intergenic | 30.0% | |
| ATTATTAGCTACCTTCAACT+TGG | + | chr8_1:66750701-66750720 | Msa1208560:intron | 30.0% | |
| TTATTAGCTACCTTCAACTT+GGG | + | chr8_1:66750702-66750721 | Msa1208560:intron | 30.0% | |
| GAAAACAAACACAGAAACAT+GGG | - | chr8_1:66750829-66750848 | None:intergenic | 30.0% | |
| AGAAAACAAACACAGAAACA+TGG | - | chr8_1:66750830-66750849 | None:intergenic | 30.0% | |
| CAGACAATTTCAATTGAGAA+TGG | + | chr8_1:66750945-66750964 | Msa1208560:intron | 30.0% | |
| ! | CTTCATCTCTTTTTCTCTTA+GGG | - | chr8_1:66751056-66751075 | None:intergenic | 30.0% |
| ! | TCTTCATCTCTTTTTCTCTT+AGG | - | chr8_1:66751057-66751076 | None:intergenic | 30.0% |
| ! | CCCCTTTTCAAAATAAGATA+AGG | - | chr8_1:66751182-66751201 | None:intergenic | 30.0% |
| AAGGTTATTGTTAGTGTTAG+TGG | + | chr8_1:66751218-66751237 | Msa1208560:three_prime_UTR | 30.0% | |
| !! | ATGATGATTCTGAGATCCAA+GGG | - | chr8_1:66747339-66747358 | None:intergenic | 35.0% |
| !!! | TATGGTTTTGGGTAGGAAAT+GGG | - | chr8_1:66747366-66747385 | None:intergenic | 35.0% |
| !!! | TTATGGTTTTGGGTAGGAAA+TGG | - | chr8_1:66747367-66747386 | None:intergenic | 35.0% |
| !!! | TAGAGTTTATGGTTTTGGGT+AGG | - | chr8_1:66747373-66747392 | None:intergenic | 35.0% |
| CATGTGTTGTAGATTGAAAG+AGG | - | chr8_1:66747423-66747442 | None:intergenic | 35.0% | |
| CTCTTTCAATCTACAACACA+TGG | + | chr8_1:66747421-66747440 | Msa1208560:exon | 35.0% | |
| GAGGATGAAATGGACAAATA+CGG | + | chr8_1:66747875-66747894 | Msa1208560:CDS | 35.0% | |
| !! | ATGCATCTTTGTTTGAGTTG+CGG | - | chr8_1:66747938-66747957 | None:intergenic | 35.0% |
| CTCAAACAAAGATGCATCAA+AGG | + | chr8_1:66747941-66747960 | Msa1208560:CDS | 35.0% | |
| CAAAGTTGTTTATGCGTAAC+TGG | + | chr8_1:66748228-66748247 | Msa1208560:intron | 35.0% | |
| TTATGCGTAACTGGTATCTA+TGG | + | chr8_1:66748237-66748256 | Msa1208560:intron | 35.0% | |
| ! | GTGTTTGGAGCATATATGTA+CGG | + | chr8_1:66748401-66748420 | Msa1208560:CDS | 35.0% |
| ! | ATTTTGCAACATGCAAGAAG+AGG | + | chr8_1:66748526-66748545 | Msa1208560:CDS | 35.0% |
| ! | TTTTGCAACATGCAAGAAGA+GGG | + | chr8_1:66748527-66748546 | Msa1208560:CDS | 35.0% |
| TGCAAGAATCATCAGTTTGT+TGG | - | chr8_1:66748617-66748636 | None:intergenic | 35.0% | |
| TAAACAACTAACCTGCAAAG+AGG | - | chr8_1:66748645-66748664 | None:intergenic | 35.0% | |
| TATGCTAGCTAAGTTGCATT+AGG | - | chr8_1:66748677-66748696 | None:intergenic | 35.0% | |
| !! | TTAAAGGGTGTTAGTAGTTG+CGG | + | chr8_1:66748799-66748818 | Msa1208560:intron | 35.0% |
| AAAAATAGAGCCAATGGTGA+TGG | + | chr8_1:66748876-66748895 | Msa1208560:intron | 35.0% | |
| GTCTAAATAACCATCACCAT+TGG | - | chr8_1:66748889-66748908 | None:intergenic | 35.0% | |
| !! | TGGTGATGGTTATTTAGACA+TGG | + | chr8_1:66748890-66748909 | Msa1208560:intron | 35.0% |
| GATGGTTATTTAGACATGGT+CGG | + | chr8_1:66748894-66748913 | Msa1208560:intron | 35.0% | |
| !!! | GGCGAGTTTTTTTTCTTTCT+TGG | + | chr8_1:66748915-66748934 | Msa1208560:intron | 35.0% |
| AGTTATGTCGATGACTATGA+TGG | + | chr8_1:66748949-66748968 | Msa1208560:intron | 35.0% | |
| GTTAGAGAGTTATTGCCTTA+TGG | + | chr8_1:66748971-66748990 | Msa1208560:intron | 35.0% | |
| GTGTCCAAAGACTATTTACT+TGG | - | chr8_1:66749807-66749826 | None:intergenic | 35.0% | |
| GTGACCAAACACTATTTGTT+TGG | + | chr8_1:66749916-66749935 | Msa1208560:intron | 35.0% | |
| GAGACCAAACAAATAGTGTT+TGG | - | chr8_1:66749923-66749942 | None:intergenic | 35.0% | |
| ! | CCGTTAGATTTTGTTCTTAG+TGG | + | chr8_1:66750000-66750019 | Msa1208560:intron | 35.0% |
| TTCTTAGTGGAATACATGTG+TGG | + | chr8_1:66750013-66750032 | Msa1208560:intron | 35.0% | |
| CACATACTTTGGTTGTTACA+CGG | - | chr8_1:66750496-66750515 | None:intergenic | 35.0% | |
| ! | TTGATCTTTTCCACTGATGT+TGG | - | chr8_1:66750534-66750553 | None:intergenic | 35.0% |
| CACTAATTGACAGACATGTT+TGG | - | chr8_1:66750750-66750769 | None:intergenic | 35.0% | |
| ACATGTCTGTCAATTAGTGA+AGG | + | chr8_1:66750751-66750770 | Msa1208560:intron | 35.0% | |
| AAAGGAAAGATGATCCCAAA+TGG | + | chr8_1:66750977-66750996 | Msa1208560:CDS | 35.0% | |
| CTTGCTAGTAGTTTCCATTT+GGG | - | chr8_1:66750994-66751013 | None:intergenic | 35.0% | |
| CTCCTTAGAATCTTATGAGA+GGG | - | chr8_1:66751333-66751352 | None:intergenic | 35.0% | |
| !! | GGGTGGTCTTATTTAAGGAA+GGG | - | chr8_1:66747318-66747337 | None:intergenic | 40.0% |
| !! | TGATGATTCTGAGATCCAAG+GGG | - | chr8_1:66747338-66747357 | None:intergenic | 40.0% |
| !! | GATGATGATTCTGAGATCCA+AGG | - | chr8_1:66747340-66747359 | None:intergenic | 40.0% |
| CAATTGGAGACAAACTAACC+AGG | - | chr8_1:66747547-66747566 | None:intergenic | 40.0% | |
| TTAACTCGGTATCCGATTCA+AGG | + | chr8_1:66747579-66747598 | Msa1208560:intron | 40.0% | |
| !!! | GTCATTTTTCATTCACAGCG+CGG | - | chr8_1:66747834-66747853 | None:intergenic | 40.0% |
| GCTGTGAATGAAAAATGACC+TGG | + | chr8_1:66747835-66747854 | Msa1208560:intron | 40.0% | |
| !!! | CCTGGTTTTTTACAGTTGCA+CGG | + | chr8_1:66747853-66747872 | Msa1208560:intron | 40.0% |
| !! | GCATCAAAGGTCTTGTTCAA+CGG | + | chr8_1:66747954-66747973 | Msa1208560:CDS | 40.0% |
| ACGGTTAACATCAGAAAACG+TGG | + | chr8_1:66747973-66747992 | Msa1208560:CDS | 40.0% | |
| GTTAACATCAGAAAACGTGG+TGG | + | chr8_1:66747976-66747995 | Msa1208560:CDS | 40.0% | |
| GTAGCTTCATACAACGGATA+CGG | - | chr8_1:66748042-66748061 | None:intergenic | 40.0% | |
| TGGTGAGTAGCTTCATACAA+CGG | - | chr8_1:66748048-66748067 | None:intergenic | 40.0% | |
| AACGCGGTTCAAAAAACTGA+AGG | + | chr8_1:66748076-66748095 | Msa1208560:CDS | 40.0% | |
| ACGCGGTTCAAAAAACTGAA+GGG | + | chr8_1:66748077-66748096 | Msa1208560:CDS | 40.0% | |
| TTCAAGCACAGGATCATGTT+TGG | - | chr8_1:66748116-66748135 | None:intergenic | 40.0% | |
| AGGATATCAAGTTCAAGCAC+AGG | - | chr8_1:66748127-66748146 | None:intergenic | 40.0% | |
| TATAGAGGAGAGAGAAATCG+AGG | + | chr8_1:66748328-66748347 | Msa1208560:intron | 40.0% | |
| TTGGAGCATATATGTACGGA+AGG | + | chr8_1:66748405-66748424 | Msa1208560:CDS | 40.0% | |
| TGGAGCATATATGTACGGAA+GGG | + | chr8_1:66748406-66748425 | Msa1208560:CDS | 40.0% | |
| TAGCTAAGTTGCATTAGGCA+TGG | - | chr8_1:66748672-66748691 | None:intergenic | 40.0% | |
| TGTCGATGAGTGATAAAACG+TGG | + | chr8_1:66748852-66748871 | Msa1208560:intron | 40.0% | |
| GTCGATGAGTGATAAAACGT+GGG | + | chr8_1:66748853-66748872 | Msa1208560:intron | 40.0% | |
| ! | CCTTATGGTGATGATAGTGT+GGG | + | chr8_1:66748986-66749005 | Msa1208560:intron | 40.0% |
| TTCTCTCGCTGAAAATAGCA+TGG | - | chr8_1:66749755-66749774 | None:intergenic | 40.0% | |
| TCTTGTGACCATGGAAGAAT+AGG | - | chr8_1:66749784-66749803 | None:intergenic | 40.0% | |
| !! | TTTACTTGGTCTTGTGACCA+TGG | - | chr8_1:66749793-66749812 | None:intergenic | 40.0% |
| GTTATAATAACTCTCTCGCG+AGG | + | chr8_1:66750064-66750083 | Msa1208560:intron | 40.0% | |
| ATAAAGTCTCACCGTTGATC+AGG | + | chr8_1:66750218-66750237 | Msa1208560:intron | 40.0% | |
| TTCAAACACGCAATTGTGTG+TGG | + | chr8_1:66750339-66750358 | Msa1208560:intron | 40.0% | |
| AACGGCATCAAAATACAAGC+TGG | - | chr8_1:66750420-66750439 | None:intergenic | 40.0% | |
| !!! | AGCTTGTATTTTGATGCCGT+TGG | + | chr8_1:66750419-66750438 | Msa1208560:intron | 40.0% |
| TTTGGTTGTTACACGGTAGT+GGG | - | chr8_1:66750489-66750508 | None:intergenic | 40.0% | |
| CGTGTAACAACCAAAGTATG+TGG | + | chr8_1:66750494-66750513 | Msa1208560:intron | 40.0% | |
| ATGGACATGACCACATACTT+TGG | - | chr8_1:66750507-66750526 | None:intergenic | 40.0% | |
| ATTGACAGACATGTTTGGCA+TGG | - | chr8_1:66750745-66750764 | None:intergenic | 40.0% | |
| TGAGAATGGAGCAAGAGAAA+AGG | + | chr8_1:66750959-66750978 | Msa1208560:CDS | 40.0% | |
| CCTTGCTAGTAGTTTCCATT+TGG | - | chr8_1:66750995-66751014 | None:intergenic | 40.0% | |
| CCAAATGGAAACTACTAGCA+AGG | + | chr8_1:66750992-66751011 | Msa1208560:CDS | 40.0% | |
| ATGGAAACTACTAGCAAGGA+AGG | + | chr8_1:66750996-66751015 | Msa1208560:CDS | 40.0% | |
| GGAAAACATAACCTTAGCTG+AGG | - | chr8_1:66751025-66751044 | None:intergenic | 40.0% | |
| ! | TTTTCTCTTAGGGAGAGACA+AGG | - | chr8_1:66751046-66751065 | None:intergenic | 40.0% |
| ! | AATCGTGGGATCAGATGTTT+TGG | + | chr8_1:66751096-66751115 | Msa1208560:CDS | 40.0% |
| GGGTTTCAATTGTGTACGTA+AGG | + | chr8_1:66751199-66751218 | Msa1208560:three_prime_UTR | 40.0% | |
| TGTTAGTGGCTCTTCAATTG+AGG | + | chr8_1:66751232-66751251 | Msa1208560:three_prime_UTR | 40.0% | |
| TCTTATGAGAGGGCAAAATG+AGG | - | chr8_1:66751323-66751342 | None:intergenic | 40.0% | |
| TGCCCTCTCATAAGATTCTA+AGG | + | chr8_1:66751328-66751347 | Msa1208560:three_prime_UTR | 40.0% | |
| CCTCCTTAGAATCTTATGAG+AGG | - | chr8_1:66751334-66751353 | None:intergenic | 40.0% | |
| ! | CCTCTCATAAGATTCTAAGG+AGG | + | chr8_1:66751331-66751350 | Msa1208560:three_prime_UTR | 40.0% |
| !! | GGGGTGGTCTTATTTAAGGA+AGG | - | chr8_1:66747319-66747338 | None:intergenic | 45.0% |
| !! | CCAAGGGGTGGTCTTATTTA+AGG | - | chr8_1:66747323-66747342 | None:intergenic | 45.0% |
| CCTTAAATAAGACCACCCCT+TGG | + | chr8_1:66747320-66747339 | Msa1208560:five_prime_UTR | 45.0% | |
| GAATACCCAAACCACACCAA+TGG | + | chr8_1:66747448-66747467 | Msa1208560:CDS | 45.0% | |
| ACTAACCAGGATGCTTGTGT+GGG | - | chr8_1:66747534-66747553 | None:intergenic | 45.0% | |
| AACTAACCAGGATGCTTGTG+TGG | - | chr8_1:66747535-66747554 | None:intergenic | 45.0% | |
| CTACAAACCTGGATGAGTAG+AGG | - | chr8_1:66747769-66747788 | None:intergenic | 45.0% | |
| CCGTGCAACTGTAAAAAACC+AGG | - | chr8_1:66747856-66747875 | None:intergenic | 45.0% | |
| !!! | GGTTTTTTACAGTTGCACGG+AGG | + | chr8_1:66747856-66747875 | Msa1208560:intron | 45.0% |
| CAAATACGGAATCCACCTGT+TGG | + | chr8_1:66747889-66747908 | Msa1208560:CDS | 45.0% | |
| ATACAACGGATACGGAGATC+CGG | - | chr8_1:66748034-66748053 | None:intergenic | 45.0% | |
| ACTCACCAATCACTTCAACG+CGG | + | chr8_1:66748060-66748079 | Msa1208560:CDS | 45.0% | |
| TTGAACCGCGTTGAAGTGAT+TGG | - | chr8_1:66748068-66748087 | None:intergenic | 45.0% | |
| CGGTTCAAAAAACTGAAGGG+TGG | + | chr8_1:66748080-66748099 | Msa1208560:CDS | 45.0% | |
| ACTTGATATCCTCCGCTTCA+TGG | + | chr8_1:66748135-66748154 | Msa1208560:CDS | 45.0% | |
| TTTCGCTTTCGTCCATGAAG+CGG | - | chr8_1:66748150-66748169 | None:intergenic | 45.0% | |
| ! | GAAATCGAGGAAGCATAGAG+AGG | + | chr8_1:66748341-66748360 | Msa1208560:CDS | 45.0% |
| GTTGTATGCGGAACTTTCTG+AGG | + | chr8_1:66748371-66748390 | Msa1208560:CDS | 45.0% | |
| AACATGGTATGGTCCAACGT+CGG | - | chr8_1:66748436-66748455 | None:intergenic | 45.0% | |
| !! | CAGGTGGAGAATTTGCTACA+CGG | - | chr8_1:66748480-66748499 | None:intergenic | 45.0% |
| AGCAAATTCTCCACCTGTCA+AGG | + | chr8_1:66748483-66748502 | Msa1208560:CDS | 45.0% | |
| GCAAATTCTCCACCTGTCAA+GGG | + | chr8_1:66748484-66748503 | Msa1208560:CDS | 45.0% | |
| AACATGCAAGAAGAGGGTGA+AGG | + | chr8_1:66748533-66748552 | Msa1208560:CDS | 45.0% | |
| ACATGCAAGAAGAGGGTGAA+GGG | + | chr8_1:66748534-66748553 | Msa1208560:CDS | 45.0% | |
| CTTGCAATGTTCCTCTTTGC+AGG | + | chr8_1:66748631-66748650 | Msa1208560:CDS | 45.0% | |
| CGTGGGAAAAATAGAGCCAA+TGG | + | chr8_1:66748870-66748889 | Msa1208560:intron | 45.0% | |
| ! | GCCTTATGGTGATGATAGTG+TGG | + | chr8_1:66748985-66749004 | Msa1208560:intron | 45.0% |
| CCCACACTATCATCACCATA+AGG | - | chr8_1:66748989-66749008 | None:intergenic | 45.0% | |
| ! | TATGGTGATGATAGTGTGGG+TGG | + | chr8_1:66748989-66749008 | Msa1208560:intron | 45.0% |
| CTTTGGTTGTTACACGGTAG+TGG | - | chr8_1:66750490-66750509 | None:intergenic | 45.0% | |
| !! | TTCCACTGATGTTGGTGTCA+TGG | - | chr8_1:66750526-66750545 | None:intergenic | 45.0% |
| TACCTTCAACTTGGGAAGCA+TGG | + | chr8_1:66750710-66750729 | Msa1208560:intron | 45.0% | |
| ! | AACCATGCTTCCCAAGTTGA+AGG | - | chr8_1:66750715-66750734 | None:intergenic | 45.0% |
| AGAGTGACCATAGACAATCG+TGG | + | chr8_1:66751081-66751100 | Msa1208560:CDS | 45.0% | |
| GAGTGACCATAGACAATCGT+GGG | + | chr8_1:66751082-66751101 | Msa1208560:CDS | 45.0% | |
| TCTGATCCCACGATTGTCTA+TGG | - | chr8_1:66751091-66751110 | None:intergenic | 45.0% | |
| !! | TGATTCTGAGATCCAAGGGG+TGG | - | chr8_1:66747335-66747354 | None:intergenic | 50.0% |
| TACCCAAACCACACCAATGG+AGG | + | chr8_1:66747451-66747470 | Msa1208560:CDS | 50.0% | |
| GACCTCCATTGGTGTGGTTT+GGG | - | chr8_1:66747456-66747475 | None:intergenic | 50.0% | |
| TAAGACGACCTCCATTGGTG+TGG | - | chr8_1:66747462-66747481 | None:intergenic | 50.0% | |
| CTCGAAAACAGGAGATACCG+AGG | - | chr8_1:66747651-66747670 | None:intergenic | 50.0% | |
| TGGAAGGAACGCCGTGAATT+TGG | - | chr8_1:66747721-66747740 | None:intergenic | 50.0% | |
| GTAGCCGATGAAAGCGGTTA+CGG | - | chr8_1:66747747-66747766 | None:intergenic | 50.0% | |
| GTAGAGGTAGCCGATGAAAG+CGG | - | chr8_1:66747753-66747772 | None:intergenic | 50.0% | |
| CAGTTGCACGGAGGATGAAA+TGG | + | chr8_1:66747865-66747884 | Msa1208560:intron | 50.0% | |
| ACACGTGAGATAGTGCCAAC+AGG | - | chr8_1:66747907-66747926 | None:intergenic | 50.0% | |
| ! | GCACAGGATCATGTTTGGTG+AGG | - | chr8_1:66748111-66748130 | None:intergenic | 50.0% |
| ! | AGGAAGCATAGAGAGGAGCA+AGG | + | chr8_1:66748348-66748367 | Msa1208560:CDS | 50.0% |
| ! | GGAAGCATAGAGAGGAGCAA+GGG | + | chr8_1:66748349-66748368 | Msa1208560:CDS | 50.0% |
| AGAGGAGCAAGGGTTGTATG+CGG | + | chr8_1:66748359-66748378 | Msa1208560:CDS | 50.0% | |
| !! | TTCTGAGGCGATGGAGTGTT+TGG | + | chr8_1:66748386-66748405 | Msa1208560:CDS | 50.0% |
| CGTTGGACCATACCATGTTG+AGG | + | chr8_1:66748437-66748456 | Msa1208560:CDS | 50.0% | |
| ! | ATGATAGTGTGGGTGGTGGT+CGG | + | chr8_1:66748996-66749015 | Msa1208560:intron | 50.0% |
| TGGTCACACCAACACACTCA+CGG | + | chr8_1:66749657-66749676 | Msa1208560:intron | 50.0% | |
| AATGGATGCCGTGAGTGTGT+TGG | - | chr8_1:66749668-66749687 | None:intergenic | 50.0% | |
| ! | CACACTCACGGCATCCATTT+TGG | + | chr8_1:66749669-66749688 | Msa1208560:intron | 50.0% |
| TAACTCTCTCGCGAGGTTGT+CGG | + | chr8_1:66750071-66750090 | Msa1208560:intron | 50.0% | |
| GACTACGATCGATGGACCAA+CGG | - | chr8_1:66750438-66750457 | None:intergenic | 50.0% | |
| GTCCATGACACCAACATCAG+TGG | + | chr8_1:66750521-66750540 | Msa1208560:intron | 50.0% | |
| AAGGAAGGTTGCCTCAGCTA+AGG | + | chr8_1:66751011-66751030 | Msa1208560:CDS | 50.0% | |
| CGACCTCCATTGGTGTGGTT+TGG | - | chr8_1:66747457-66747476 | None:intergenic | 55.0% | |
| TCGGGTAAGACGACCTCCAT+TGG | - | chr8_1:66747467-66747486 | None:intergenic | 55.0% | |
| TCGGAGCTGCGTTGTTTACG+CGG | - | chr8_1:66747689-66747708 | None:intergenic | 55.0% | |
| ACCGCCGTAACCGCTTTCAT+CGG | + | chr8_1:66747740-66747759 | Msa1208560:CDS | 55.0% | |
| TCGGCTACCTCTACTCATCC+AGG | + | chr8_1:66747759-66747778 | Msa1208560:CDS | 55.0% | |
| CGTGAGATAGTGCCAACAGG+TGG | - | chr8_1:66747904-66747923 | None:intergenic | 55.0% | |
| TGGATGTACTCCAACTCGCC+AGG | + | chr8_1:66747996-66748015 | Msa1208560:CDS | 55.0% | |
| !! | TGCGGAACTTTCTGAGGCGA+TGG | + | chr8_1:66748377-66748396 | Msa1208560:CDS | 55.0% |
| AAGCTGAAGCCCTTGACAGG+TGG | - | chr8_1:66748496-66748515 | None:intergenic | 55.0% | |
| CAGAAGCTGAAGCCCTTGAC+AGG | - | chr8_1:66748499-66748518 | None:intergenic | 55.0% | |
| TGCAAGAAGAGGGTGAAGGG+AGG | + | chr8_1:66748537-66748556 | Msa1208560:CDS | 55.0% | |
| ! | GCTGGAGGTGCAAACGTATG+TGG | + | chr8_1:66748562-66748581 | Msa1208560:CDS | 55.0% |
| ! | GGTGATGATAGTGTGGGTGG+TGG | + | chr8_1:66748992-66749011 | Msa1208560:intron | 55.0% |
| AACTCTCTCGCGAGGTTGTC+GGG | + | chr8_1:66750072-66750091 | Msa1208560:intron | 55.0% | |
| TCCAGCCCACACAAGCATCC+TGG | + | chr8_1:66747526-66747545 | Msa1208560:CDS | 60.0% | |
| ACCAGGATGCTTGTGTGGGC+TGG | - | chr8_1:66747530-66747549 | None:intergenic | 60.0% | |
| AAAGCGGTTACGGCGGTGGA+AGG | - | chr8_1:66747737-66747756 | None:intergenic | 60.0% | |
| GATGAAAGCGGTTACGGCGG+TGG | - | chr8_1:66747741-66747760 | None:intergenic | 60.0% | |
| GCCGATGAAAGCGGTTACGG+CGG | - | chr8_1:66747744-66747763 | None:intergenic | 60.0% | |
| CGCTTTCGTCCATGAAGCGG+AGG | - | chr8_1:66748147-66748166 | None:intergenic | 60.0% | |
| CATCGCAGAGCCTGGCGAGT+TGG | - | chr8_1:66748009-66748028 | None:intergenic | 65.0% | |
| ATCCGGTGCATCGCAGAGCC+TGG | - | chr8_1:66748017-66748036 | None:intergenic | 65.0% | |
| ! | ACGGAAGGGTGCACCGACGT+TGG | + | chr8_1:66748420-66748439 | Msa1208560:CDS | 65.0% |
| AGAGGGTGAAGGGAGGCTGC+TGG | + | chr8_1:66748544-66748563 | Msa1208560:CDS | 65.0% | |
| CGCCAGGCTCTGCGATGCAC+CGG | + | chr8_1:66748012-66748031 | Msa1208560:CDS | 70.0% | |
| GGGTGAAGGGAGGCTGCTGG+AGG | + | chr8_1:66748547-66748566 | Msa1208560:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 66747297 | 66751450 | 66747297 | ID=Msa1208560;Name=Msa1208560 |
| chr8_1 | mRNA | 66747297 | 66751450 | 66747297 | ID=Msa1208560-mRNA-1;Parent=Msa1208560;Name=Msa1208560-mRNA-1;_AED=0.09;_eAED=0.09;_QI=143|1|1|1|1|1|5|277|363 |
| chr8_1 | exon | 66747297 | 66747547 | 66747297 | ID=Msa1208560-mRNA-1:exon:21980;Parent=Msa1208560-mRNA-1 |
| chr8_1 | exon | 66747647 | 66747780 | 66747647 | ID=Msa1208560-mRNA-1:exon:21981;Parent=Msa1208560-mRNA-1 |
| chr8_1 | exon | 66747868 | 66748171 | 66747868 | ID=Msa1208560-mRNA-1:exon:21982;Parent=Msa1208560-mRNA-1 |
| chr8_1 | exon | 66748333 | 66748652 | 66748333 | ID=Msa1208560-mRNA-1:exon:21983;Parent=Msa1208560-mRNA-1 |
| chr8_1 | exon | 66750948 | 66751450 | 66750948 | ID=Msa1208560-mRNA-1:exon:21984;Parent=Msa1208560-mRNA-1 |
| chr8_1 | five_prime_UTR | 66747297 | 66747439 | 66747297 | ID=Msa1208560-mRNA-1:five_prime_utr;Parent=Msa1208560-mRNA-1 |
| chr8_1 | CDS | 66747440 | 66747547 | 66747440 | ID=Msa1208560-mRNA-1:cds;Parent=Msa1208560-mRNA-1 |
| chr8_1 | CDS | 66747647 | 66747780 | 66747647 | ID=Msa1208560-mRNA-1:cds;Parent=Msa1208560-mRNA-1 |
| chr8_1 | CDS | 66747868 | 66748171 | 66747868 | ID=Msa1208560-mRNA-1:cds;Parent=Msa1208560-mRNA-1 |
| chr8_1 | CDS | 66748333 | 66748652 | 66748333 | ID=Msa1208560-mRNA-1:cds;Parent=Msa1208560-mRNA-1 |
| chr8_1 | CDS | 66750948 | 66751173 | 66750948 | ID=Msa1208560-mRNA-1:cds;Parent=Msa1208560-mRNA-1 |
| chr8_1 | three_prime_UTR | 66751174 | 66751450 | 66751174 | ID=Msa1208560-mRNA-1:three_prime_utr;Parent=Msa1208560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
