Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369800 | XP_003608891.1 | 97.796 | 363 | 7 | 1 | 1 | 363 | 1 | 362 | 0.0 | 744 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369800 | sp|Q94BN0|BT2_ARATH | 61.515 | 330 | 114 | 6 | 15 | 332 | 32 | 360 | 2.00e-132 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369800 | G7JMM8 | 97.796 | 363 | 7 | 1 | 1 | 363 | 1 | 362 | 0.0 | 744 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1369800 | TR | TAZ |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1258870 | Msa1369800 | 0.931953 | 1.759222e-94 | -8.615850e-47 |
| Msa1330140 | Msa1369800 | 0.993877 | 7.016045e-203 | -8.615850e-47 |
| Msa1330150 | Msa1369800 | 0.995394 | 7.810570e-216 | -8.615850e-47 |
| Msa1330200 | Msa1369800 | 0.995593 | 7.640772e-218 | -8.615850e-47 |
| Msa1208560 | Msa1369800 | 0.988916 | 6.236413e-176 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369800 | MtrunA17_Chr4g0058071 | 97.796 | 363 | 7 | 1 | 1 | 363 | 1 | 362 | 0.0 | 744 |
| Msa1369800 | MtrunA17_Chr3g0116501 | 58.621 | 203 | 81 | 2 | 87 | 289 | 1 | 200 | 1.57e-86 | 260 |
| Msa1369800 | MtrunA17_Chr5g0401281 | 45.973 | 298 | 154 | 7 | 18 | 313 | 68 | 360 | 1.56e-84 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369800 | AT3G48360.1 | 61.515 | 330 | 114 | 6 | 15 | 332 | 32 | 360 | 2.03e-133 | 385 |
| Msa1369800 | AT5G63160.1 | 62.540 | 315 | 108 | 5 | 14 | 319 | 22 | 335 | 2.64e-130 | 377 |
| Msa1369800 | AT3G48360.2 | 63.636 | 286 | 92 | 5 | 15 | 289 | 32 | 316 | 3.39e-120 | 351 |
| Msa1369800 | AT5G63160.2 | 63.732 | 284 | 94 | 4 | 14 | 289 | 22 | 304 | 3.16e-119 | 347 |
| Msa1369800 | AT5G63160.3 | 64.634 | 246 | 79 | 4 | 81 | 319 | 6 | 250 | 8.10e-104 | 307 |
| Msa1369800 | AT3G48360.3 | 62.745 | 255 | 85 | 4 | 87 | 332 | 1 | 254 | 1.59e-103 | 305 |
| Msa1369800 | AT5G67480.1 | 45.364 | 302 | 159 | 6 | 18 | 317 | 61 | 358 | 7.24e-83 | 257 |
| Msa1369800 | AT5G67480.3 | 45.364 | 302 | 159 | 6 | 18 | 317 | 61 | 358 | 7.24e-83 | 257 |
| Msa1369800 | AT5G67480.2 | 45.364 | 302 | 159 | 6 | 18 | 317 | 72 | 369 | 9.61e-83 | 257 |
| Msa1369800 | AT4G37610.1 | 42.904 | 303 | 164 | 8 | 18 | 317 | 56 | 352 | 6.86e-76 | 239 |
| Msa1369800 | AT1G05690.1 | 41.528 | 301 | 170 | 5 | 18 | 317 | 55 | 350 | 1.82e-74 | 235 |
| Msa1369800 | AT1G55760.1 | 33.835 | 133 | 79 | 4 | 18 | 147 | 165 | 291 | 6.35e-13 | 69.3 |
| Msa1369800 | AT3G56230.1 | 24.845 | 161 | 120 | 1 | 25 | 184 | 120 | 280 | 2.11e-12 | 67.4 |
Find 116 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGGGTGTGGTCTTATTTA+AGG | 0.194843 | tig0018912:+56849 | None:intergenic |
| TGGAAGGAACGCCGTGAATT+TGG | 0.203367 | tig0018912:+56449 | None:intergenic |
| CTTGCAATGTTCCTCTTTGC+AGG | 0.245278 | tig0018912:-55541 | Msa1369800:intron |
| TGCCCTCTCATAAGATTCTA+AGG | 0.266164 | tig0018912:-53294 | Msa1369800:three_prime_UTR |
| CCTTGCTAGTAGTTTCCATT+TGG | 0.271352 | tig0018912:+53630 | None:intergenic |
| GTGAATTTGGATTATTCTTT+CGG | 0.293435 | tig0018912:+56462 | None:intergenic |
| GTGAATAAAGACATCATATT+CGG | 0.296060 | tig0018912:+56684 | None:intergenic |
| TTTGCTTGAAATGTAAATTT+TGG | 0.310791 | tig0018912:-53350 | Msa1369800:three_prime_UTR |
| TTATAAATTTAGTGATTATT+CGG | 0.311689 | tig0018912:-53193 | Msa1369800:three_prime_UTR |
| TTCTGAGGCGATGGAGTGTT+TGG | 0.329039 | tig0018912:-55786 | Msa1369800:CDS |
| ACTTGATATCCTCCGCTTCA+TGG | 0.330110 | tig0018912:-56031 | Msa1369800:CDS |
| GACCTCCATTGGTGTGGTTT+GGG | 0.335478 | tig0018912:+56714 | None:intergenic |
| AAGGTTATTGTTAGTGTTAG+TGG | 0.335935 | tig0018912:-53404 | Msa1369800:three_prime_UTR |
| CTTGCTAGTAGTTTCCATTT+GGG | 0.348881 | tig0018912:+53631 | None:intergenic |
| AATCGTGGGATCAGATGTTT+TGG | 0.358065 | tig0018912:-53526 | Msa1369800:CDS |
| ATTTAAGGAAGGGAAGATAT+TGG | 0.363883 | tig0018912:+56864 | None:intergenic |
| CGACCTCCATTGGTGTGGTT+TGG | 0.364602 | tig0018912:+56713 | None:intergenic |
| TGCAAGAATCATCAGTTTGT+TGG | 0.365276 | tig0018912:+55558 | None:intergenic |
| TCTGATCCCACGATTGTCTA+TGG | 0.399851 | tig0018912:+53534 | None:intergenic |
| TCAATAATGTTCTCGAAAAC+AGG | 0.405232 | tig0018912:+56508 | None:intergenic |
| CAGTTGCACGGAGGATGAAA+TGG | 0.408781 | tig0018912:-56301 | Msa1369800:CDS |
| AGAGGGTGAAGGGAGGCTGC+TGG | 0.412837 | tig0018912:-55628 | Msa1369800:CDS |
| AGGAGAATTATTGTGATGTT+TGG | 0.418373 | tig0018912:+56767 | None:intergenic |
| ACCAGGATGCTTGTGTGGGC+TGG | 0.439380 | tig0018912:+56640 | None:intergenic |
| TTCAAGCACAGGATCATGTT+TGG | 0.441776 | tig0018912:+56053 | None:intergenic |
| CGCCAGGCTCTGCGATGCAC+CGG | 0.448288 | tig0018912:-56154 | Msa1369800:CDS |
| CAGACAATTTCAATTGAGAA+TGG | 0.449145 | tig0018912:-53677 | Msa1369800:CDS |
| CATGTGTTGTAGATTGAAAG+AGG | 0.450361 | tig0018912:+56747 | None:intergenic |
| TGAATAAAGACATCATATTC+GGG | 0.450560 | tig0018912:+56685 | None:intergenic |
| TTATTAACCTCAACATGGTA+TGG | 0.459852 | tig0018912:+55728 | None:intergenic |
| TTGAACCGCGTTGAAGTGAT+TGG | 0.469408 | tig0018912:+56101 | None:intergenic |
| TGAGAATGGAGCAAGAGAAA+AGG | 0.470643 | tig0018912:-53663 | Msa1369800:CDS |
| GATGAAAGCGGTTACGGCGG+TGG | 0.476910 | tig0018912:+56429 | None:intergenic |
| GTAGCCGATGAAAGCGGTTA+CGG | 0.477754 | tig0018912:+56423 | None:intergenic |
| GTCTTTATTCACACTTCTGA+TGG | 0.479577 | tig0018912:-56673 | Msa1369800:CDS |
| AGCAAATTCTCCACCTGTCA+AGG | 0.481574 | tig0018912:-55689 | Msa1369800:CDS |
| TGTTAGTGGCTCTTCAATTG+AGG | 0.489370 | tig0018912:-53390 | Msa1369800:three_prime_UTR |
| AAAGGAAAGATGATCCCAAA+TGG | 0.490170 | tig0018912:-53645 | Msa1369800:CDS |
| TTAAATAAGACCACACCCCT+TGG | 0.498034 | tig0018912:-56847 | Msa1369800:five_prime_UTR |
| CAGAAGCTGAAGCCCTTGAC+AGG | 0.502805 | tig0018912:+55676 | None:intergenic |
| AACTAACCAGGATGCTTGTG+TGG | 0.507204 | tig0018912:+56635 | None:intergenic |
| CTCTTTCAATCTACAACACA+TGG | 0.509417 | tig0018912:-56746 | Msa1369800:exon |
| CATCGCAGAGCCTGGCGAGT+TGG | 0.510849 | tig0018912:+56160 | None:intergenic |
| GGGTTTCAATTGTGTACGTA+AGG | 0.511616 | tig0018912:-53423 | Msa1369800:three_prime_UTR |
| TGCGGAACTTTCTGAGGCGA+TGG | 0.528118 | tig0018912:-55795 | Msa1369800:CDS |
| TCGGCTACCTCTACTCATCC+AGG | 0.528548 | tig0018912:-56408 | Msa1369800:intron |
| TATAGAGGAGAGAGAAATCG+AGG | 0.529791 | tig0018912:-55844 | Msa1369800:intron |
| GAAAGAATAATCCAAATTCA+CGG | 0.535992 | tig0018912:-56460 | Msa1369800:CDS |
| TCCAGCCCACACAAGCATCC+TGG | 0.542058 | tig0018912:-56641 | Msa1369800:intron |
| CTCAAACAAAGATGCATCAA+AGG | 0.544591 | tig0018912:-56225 | Msa1369800:CDS |
| GGTGTGGTCTTATTTAAGGA+AGG | 0.546701 | tig0018912:+56853 | None:intergenic |
| TCGGGTAAGACGACCTCCAT+TGG | 0.548298 | tig0018912:+56703 | None:intergenic |
| GTGTTTGGAGCATATATGTA+CGG | 0.548333 | tig0018912:-55771 | Msa1369800:CDS |
| GAGGATGAAATGGACAAATA+CGG | 0.550313 | tig0018912:-56291 | Msa1369800:CDS |
| ACCGCCGTAACCGCTTTCAT+CGG | 0.550954 | tig0018912:-56427 | Msa1369800:CDS |
| ACACGTGAGATAGTGCCAAC+AGG | 0.553618 | tig0018912:+56262 | None:intergenic |
| ACATGCAAGAAGAGGGTGAA+GGG | 0.559984 | tig0018912:-55638 | Msa1369800:CDS |
| ATGGAAACTACTAGCAAGGA+AGG | 0.562140 | tig0018912:-53626 | Msa1369800:CDS |
| TGGATGTACTCCAACTCGCC+AGG | 0.562979 | tig0018912:-56170 | Msa1369800:CDS |
| CGCTTTCGTCCATGAAGCGG+AGG | 0.563948 | tig0018912:+56022 | None:intergenic |
| ATGCATCTTTGTTTGAGTTG+CGG | 0.567744 | tig0018912:+56231 | None:intergenic |
| GGGTGAAGGGAGGCTGCTGG+AGG | 0.568462 | tig0018912:-55625 | Msa1369800:CDS |
| TTTCGCTTTCGTCCATGAAG+CGG | 0.570395 | tig0018912:+56019 | None:intergenic |
| AAAGCGGTTACGGCGGTGGA+AGG | 0.571422 | tig0018912:+56433 | None:intergenic |
| GATGATGATTCTGAGATCCA+AGG | 0.572696 | tig0018912:+56830 | None:intergenic |
| GCATCAAAGGTCTTGTTCAA+CGG | 0.574251 | tig0018912:-56212 | Msa1369800:CDS |
| CAAATACGGAATCCACCTGT+TGG | 0.576636 | tig0018912:-56277 | Msa1369800:CDS |
| AAGGAAGGTTGCCTCAGCTA+AGG | 0.578016 | tig0018912:-53611 | Msa1369800:CDS |
| CCAAATGGAAACTACTAGCA+AGG | 0.585999 | tig0018912:-53630 | Msa1369800:CDS |
| CTCCTTAGAATCTTATGAGA+GGG | 0.589078 | tig0018912:+53292 | None:intergenic |
| GTGTGGTCTTATTTAAGGAA+GGG | 0.591375 | tig0018912:+56854 | None:intergenic |
| TTGGAGCATATATGTACGGA+AGG | 0.591498 | tig0018912:-55767 | Msa1369800:CDS |
| AGGATATCAAGTTCAAGCAC+AGG | 0.591612 | tig0018912:+56042 | None:intergenic |
| GGAAGCATAGAGAGGAGCAA+GGG | 0.591806 | tig0018912:-55823 | Msa1369800:CDS |
| ATACAACGGATACGGAGATC+CGG | 0.598941 | tig0018912:+56135 | None:intergenic |
| GCAAATTCTCCACCTGTCAA+GGG | 0.602836 | tig0018912:-55688 | Msa1369800:CDS |
| ATTCTGAGATCCAAGGGGTG+TGG | 0.604175 | tig0018912:+56837 | None:intergenic |
| GTTGTATGCGGAACTTTCTG+AGG | 0.605270 | tig0018912:-55801 | Msa1369800:CDS |
| GTAGCTTCATACAACGGATA+CGG | 0.605346 | tig0018912:+56127 | None:intergenic |
| GAATACCCAAACCACACCAA+TGG | 0.607266 | tig0018912:-56719 | Msa1369800:CDS |
| TCGGAGCTGCGTTGTTTACG+CGG | 0.613669 | tig0018912:+56481 | None:intergenic |
| AAGCTGAAGCCCTTGACAGG+TGG | 0.613763 | tig0018912:+55679 | None:intergenic |
| AGGAAGCATAGAGAGGAGCA+AGG | 0.616562 | tig0018912:-55824 | Msa1369800:CDS |
| TAAACAACTAACCTGCAAAG+AGG | 0.620623 | tig0018912:+55530 | None:intergenic |
| ATGATGATTCTGAGATCCAA+GGG | 0.622801 | tig0018912:+56831 | None:intergenic |
| CCTCCTTAGAATCTTATGAG+AGG | 0.623054 | tig0018912:+53291 | None:intergenic |
| CAGGTGGAGAATTTGCTACA+CGG | 0.624063 | tig0018912:+55695 | None:intergenic |
| CGTTGGACCATACCATGTTG+AGG | 0.625619 | tig0018912:-55735 | Msa1369800:CDS |
| TACCCAAACCACACCAATGG+AGG | 0.626720 | tig0018912:-56716 | Msa1369800:CDS |
| TAAGACGACCTCCATTGGTG+TGG | 0.627752 | tig0018912:+56708 | None:intergenic |
| TCTTATGAGAGGGCAAAATG+AGG | 0.633014 | tig0018912:+53302 | None:intergenic |
| CTACAAACCTGGATGAGTAG+AGG | 0.636623 | tig0018912:+56401 | None:intergenic |
| ATATTGTAACAATAATGTCT+CGG | 0.638704 | tig0018912:-53494 | Msa1369800:CDS |
| GCTGGAGGTGCAAACGTATG+TGG | 0.643612 | tig0018912:-55610 | Msa1369800:CDS |
| TTTCTTTATTAACCTCAACA+TGG | 0.646312 | tig0018912:+55723 | None:intergenic |
| GAAATCGAGGAAGCATAGAG+AGG | 0.652687 | tig0018912:-55831 | Msa1369800:CDS |
| GCACAGGATCATGTTTGGTG+AGG | 0.659496 | tig0018912:+56058 | None:intergenic |
| GAGTGACCATAGACAATCGT+GGG | 0.660262 | tig0018912:-53540 | Msa1369800:CDS |
| GCCGATGAAAGCGGTTACGG+CGG | 0.661788 | tig0018912:+56426 | None:intergenic |
| TGCAAGAAGAGGGTGAAGGG+AGG | 0.663791 | tig0018912:-55635 | Msa1369800:CDS |
| CGTGAGATAGTGCCAACAGG+TGG | 0.667055 | tig0018912:+56265 | None:intergenic |
| GGAAAACATAACCTTAGCTG+AGG | 0.673989 | tig0018912:+53600 | None:intergenic |
| GTAGAGGTAGCCGATGAAAG+CGG | 0.674697 | tig0018912:+56417 | None:intergenic |
| AACATGCAAGAAGAGGGTGA+AGG | 0.677915 | tig0018912:-55639 | Msa1369800:CDS |
| TGGAGCATATATGTACGGAA+GGG | 0.681205 | tig0018912:-55766 | Msa1369800:CDS |
| CCTCTCATAAGATTCTAAGG+AGG | 0.681421 | tig0018912:-53291 | Msa1369800:three_prime_UTR |
| AGAGGAGCAAGGGTTGTATG+CGG | 0.686478 | tig0018912:-55813 | Msa1369800:CDS |
| TGGTGAGTAGCTTCATACAA+CGG | 0.689964 | tig0018912:+56121 | None:intergenic |
| ACTAACCAGGATGCTTGTGT+GGG | 0.692654 | tig0018912:+56636 | None:intergenic |
| CTCGAAAACAGGAGATACCG+AGG | 0.700797 | tig0018912:+56519 | None:intergenic |
| AGAGTGACCATAGACAATCG+TGG | 0.708473 | tig0018912:-53541 | Msa1369800:CDS |
| ACGGTTAACATCAGAAAACG+TGG | 0.721632 | tig0018912:-56193 | Msa1369800:CDS |
| AACATGGTATGGTCCAACGT+CGG | 0.721753 | tig0018912:+55739 | None:intergenic |
| GTTAACATCAGAAAACGTGG+TGG | 0.747454 | tig0018912:-56190 | Msa1369800:CDS |
| TGATGATTCTGAGATCCAAG+GGG | 0.821345 | tig0018912:+56832 | None:intergenic |
| ACTCACCAATCACTTCAACG+CGG | 0.835800 | tig0018912:-56106 | Msa1369800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACAATATACAATAAATTAA+CGG | + | tig0018912:55725-55744 | None:intergenic | 10.0% |
| !! | TATATTGTATATTTGTATAT+GGG | - | tig0018912:55736-55755 | Msa1369800:CDS | 10.0% |
| !!! | AGATATTTATTAATTTTGAT+GGG | + | tig0018912:56220-56239 | None:intergenic | 10.0% |
| !!! | TAGATATTTATTAATTTTGA+TGG | + | tig0018912:56221-56240 | None:intergenic | 10.0% |
| !!! | AAATAATTAAGCTATTTTTT+TGG | - | tig0018912:56357-56376 | Msa1369800:intron | 10.0% |
| !! | TTATAAATTTAGTGATTATT+CGG | - | tig0018912:56871-56890 | Msa1369800:five_prime_UTR | 10.0% |
| !! | ATAATCATGGAATTAATTAA+AGG | - | tig0018912:54675-54694 | Msa1369800:intron | 15.0% |
| !! | TAATCATGGAATTAATTAAA+GGG | - | tig0018912:54676-54695 | Msa1369800:intron | 15.0% |
| !!! | ACTTATTTTATATTTGAGAT+TGG | - | tig0018912:55035-55054 | Msa1369800:intron | 15.0% |
| !!! | AATTTCATTTTTGTTTAGAT+GGG | - | tig0018912:55266-55285 | Msa1369800:intron | 15.0% |
| !! | CATTAATTATTTCATAATCA+AGG | + | tig0018912:55482-55501 | None:intergenic | 15.0% |
| !!! | ATGTTCAAATATTCTTTTTT+AGG | + | tig0018912:55570-55589 | None:intergenic | 15.0% |
| !! | GTATATTGTATATTTGTATA+TGG | - | tig0018912:55735-55754 | Msa1369800:CDS | 15.0% |
| !! | ATATTGTATATTTGTATATG+GGG | - | tig0018912:55737-55756 | Msa1369800:CDS | 15.0% |
| !!! | TTTTTAGAGTTTATGGTTTT+GGG | + | tig0018912:53274-53293 | None:intergenic | 20.0% |
| !!! | TTTTTTAGAGTTTATGGTTT+TGG | + | tig0018912:53275-53294 | None:intergenic | 20.0% |
| !! | TTAAGAAAAATACGAACAAT+TGG | + | tig0018912:53460-53479 | None:intergenic | 20.0% |
| !! | GTTGTAAATCAATAATTAAC+AGG | - | tig0018912:53522-53541 | Msa1369800:CDS | 20.0% |
| !! | TGATTATTATTGTGTTATAG+AGG | - | tig0018912:54205-54224 | Msa1369800:intron | 20.0% |
| !! | TTATGACCGAAATAAAAAAT+CGG | + | tig0018912:54948-54967 | None:intergenic | 20.0% |
| !! | TTATTTCGGTCATAAATATA+AGG | - | tig0018912:54953-54972 | Msa1369800:intron | 20.0% |
| !!! | TATTTTATATTTGAGATTGG+AGG | - | tig0018912:55038-55057 | Msa1369800:intron | 20.0% |
| !!! | CAATTTCATTTTTGTTTAGA+TGG | - | tig0018912:55265-55284 | Msa1369800:intron | 20.0% |
| !!! | TAAGTCTCTTGATATTTTTA+GGG | - | tig0018912:55830-55849 | Msa1369800:CDS | 20.0% |
| !!! | CTAATTTTATAGAGATGAAT+CGG | - | tig0018912:56066-56085 | Msa1369800:CDS | 20.0% |
| !! | ATATTGTAACAATAATGTCT+CGG | - | tig0018912:56570-56589 | Msa1369800:intron | 20.0% |
| !!! | TTTGCTTGAAATGTAAATTT+TGG | - | tig0018912:56714-56733 | Msa1369800:CDS | 20.0% |
| !!! | TTGGTGTTTTTTAGAGTTTA+TGG | + | tig0018912:53281-53300 | None:intergenic | 25.0% |
| ! | TGAATAAAGACATCATATTC+GGG | + | tig0018912:53382-53401 | None:intergenic | 25.0% |
| ! | GTGAATAAAGACATCATATT+CGG | + | tig0018912:53383-53402 | None:intergenic | 25.0% |
| !! | TGTTCGTATTTTTCTTAACT+CGG | - | tig0018912:53462-53481 | Msa1369800:exon | 25.0% |
| ! | GTGAATTTGGATTATTCTTT+CGG | + | tig0018912:53605-53624 | None:intergenic | 25.0% |
| ! | GAAAGAATAATCCAAATTCA+CGG | - | tig0018912:53604-53623 | Msa1369800:CDS | 25.0% |
| ! | TTTCTTTATTAACCTCAACA+TGG | + | tig0018912:54344-54363 | None:intergenic | 25.0% |
| !! | AGCTCTAACAAAAGATTATA+AGG | + | tig0018912:54618-54637 | None:intergenic | 25.0% |
| ! | AGAATAGTACATCATAATCA+TGG | - | tig0018912:54662-54681 | Msa1369800:intron | 25.0% |
| !!! | GTTGTTCCGATTTTTTATTT+CGG | - | tig0018912:54939-54958 | Msa1369800:intron | 25.0% |
| ! | AAAGCTGATGTATTTGATTA+AGG | - | tig0018912:54990-55009 | Msa1369800:intron | 25.0% |
| !!! | TTTTGTTTAGATGGGTAAAA+TGG | - | tig0018912:55274-55293 | Msa1369800:intron | 25.0% |
| !!! | AGAAACTATTTTGACCAAAA+TGG | + | tig0018912:55323-55342 | None:intergenic | 25.0% |
| ! | TGAACATTGCAATATTTGAT+TGG | + | tig0018912:55764-55783 | None:intergenic | 25.0% |
| !! | CTAAGTCTCTTGATATTTTT+AGG | - | tig0018912:55829-55848 | Msa1369800:CDS | 25.0% |
| ! | AAGGTAGCTAATAATAACTT+GGG | + | tig0018912:56138-56157 | None:intergenic | 25.0% |
| !!! | TGCCTTATCTTATTTTGAAA+AGG | - | tig0018912:56619-56638 | Msa1369800:intron | 25.0% |
| !!! | GCCTTATCTTATTTTGAAAA+GGG | - | tig0018912:56620-56639 | Msa1369800:intron | 25.0% |
| !!! | CCTTATCTTATTTTGAAAAG+GGG | - | tig0018912:56621-56640 | Msa1369800:intron | 25.0% |
| ATTTAAGGAAGGGAAGATAT+TGG | + | tig0018912:53203-53222 | None:intergenic | 30.0% | |
| AGGAGAATTATTGTGATGTT+TGG | + | tig0018912:53300-53319 | None:intergenic | 30.0% | |
| ATAATCGTTAGTCCTTGAAT+CGG | + | tig0018912:53491-53510 | None:intergenic | 30.0% | |
| AATCAATAATTAACAGGCCT+CGG | - | tig0018912:53528-53547 | Msa1369800:CDS | 30.0% | |
| TCAATAATGTTCTCGAAAAC+AGG | + | tig0018912:53559-53578 | None:intergenic | 30.0% | |
| ATATACAAGTACTACAAACC+TGG | + | tig0018912:53677-53696 | None:intergenic | 30.0% | |
| TTATTAACCTCAACATGGTA+TGG | + | tig0018912:54339-54358 | None:intergenic | 30.0% | |
| AATCGGAACAACATTTGTAT+GGG | + | tig0018912:54931-54950 | None:intergenic | 30.0% | |
| AAATCGGAACAACATTTGTA+TGG | + | tig0018912:54932-54951 | None:intergenic | 30.0% | |
| GATCGATTGTTACTCTTAAA+CGG | - | tig0018912:55074-55093 | Msa1369800:intron | 30.0% | |
| GAAAACATAGCGAATTTATC+TGG | - | tig0018912:55409-55428 | Msa1369800:intron | 30.0% | |
| CCACTAAGAACAAAATCTAA+CGG | + | tig0018912:55446-55465 | None:intergenic | 30.0% | |
| ATATATTGCTACCTGATCAA+CGG | + | tig0018912:55673-55692 | None:intergenic | 30.0% | |
| AATATCAAGAGACTTAGCTA+GGG | + | tig0018912:55826-55845 | None:intergenic | 30.0% | |
| AAATATCAAGAGACTTAGCT+AGG | + | tig0018912:55827-55846 | None:intergenic | 30.0% | |
| !!! | CTCTTGATATTTTTAGGGAT+TGG | - | tig0018912:55835-55854 | Msa1369800:CDS | 30.0% |
| ! | TAATTATTGACTACGATCGA+TGG | + | tig0018912:55887-55906 | None:intergenic | 30.0% |
| GAAGGTAGCTAATAATAACT+TGG | + | tig0018912:56139-56158 | None:intergenic | 30.0% | |
| ATTATTAGCTACCTTCAACT+TGG | - | tig0018912:56143-56162 | Msa1369800:CDS | 30.0% | |
| TTATTAGCTACCTTCAACTT+GGG | - | tig0018912:56144-56163 | Msa1369800:CDS | 30.0% | |
| GAAAACAAACACAGAAACAT+GGG | + | tig0018912:56271-56290 | None:intergenic | 30.0% | |
| AGAAAACAAACACAGAAACA+TGG | + | tig0018912:56272-56291 | None:intergenic | 30.0% | |
| CAGACAATTTCAATTGAGAA+TGG | - | tig0018912:56387-56406 | Msa1369800:intron | 30.0% | |
| ! | CTTCATCTCTTTTTCTCTTA+GGG | + | tig0018912:56498-56517 | None:intergenic | 30.0% |
| ! | TCTTCATCTCTTTTTCTCTT+AGG | + | tig0018912:56499-56518 | None:intergenic | 30.0% |
| ! | CCCCTTTTCAAAATAAGATA+AGG | + | tig0018912:56624-56643 | None:intergenic | 30.0% |
| AAGGTTATTGTTAGTGTTAG+TGG | - | tig0018912:56660-56679 | Msa1369800:CDS | 30.0% | |
| !! | GTGTGGTCTTATTTAAGGAA+GGG | + | tig0018912:53213-53232 | None:intergenic | 35.0% |
| !! | ATGATGATTCTGAGATCCAA+GGG | + | tig0018912:53236-53255 | None:intergenic | 35.0% |
| !!! | TATGGTTTTGGGTAGGAAAT+GGG | + | tig0018912:53263-53282 | None:intergenic | 35.0% |
| !!! | TTATGGTTTTGGGTAGGAAA+TGG | + | tig0018912:53264-53283 | None:intergenic | 35.0% |
| !!! | TAGAGTTTATGGTTTTGGGT+AGG | + | tig0018912:53270-53289 | None:intergenic | 35.0% |
| CATGTGTTGTAGATTGAAAG+AGG | + | tig0018912:53320-53339 | None:intergenic | 35.0% | |
| CTCTTTCAATCTACAACACA+TGG | - | tig0018912:53318-53337 | Msa1369800:three_prime_UTR | 35.0% | |
| GTCTTTATTCACACTTCTGA+TGG | - | tig0018912:53391-53410 | Msa1369800:three_prime_UTR | 35.0% | |
| !!! | CTGGTTTTTTTACAGTTGCA+CGG | - | tig0018912:53751-53770 | Msa1369800:intron | 35.0% |
| GAGGATGAAATGGACAAATA+CGG | - | tig0018912:53773-53792 | Msa1369800:intron | 35.0% | |
| !! | ATGCATCTTTGTTTGAGTTG+CGG | + | tig0018912:53836-53855 | None:intergenic | 35.0% |
| CTCAAACAAAGATGCATCAA+AGG | - | tig0018912:53839-53858 | Msa1369800:intron | 35.0% | |
| CAAAGTTGTTTATGCGTAAC+TGG | - | tig0018912:54126-54145 | Msa1369800:intron | 35.0% | |
| TTATGCGTAACTGGTATCTA+TGG | - | tig0018912:54135-54154 | Msa1369800:intron | 35.0% | |
| ! | GTGTTTGGAGCATATATGTA+CGG | - | tig0018912:54293-54312 | Msa1369800:intron | 35.0% |
| ! | ATTTTGCAACATGCAAGAAG+AGG | - | tig0018912:54418-54437 | Msa1369800:intron | 35.0% |
| ! | TTTTGCAACATGCAAGAAGA+GGG | - | tig0018912:54419-54438 | Msa1369800:intron | 35.0% |
| TGCAAGAATCATCAGTTTGT+TGG | + | tig0018912:54509-54528 | None:intergenic | 35.0% | |
| TAAACAACTAACCTGCAAAG+AGG | + | tig0018912:54537-54556 | None:intergenic | 35.0% | |
| TATGCTAGCTAAGTTGCATT+AGG | + | tig0018912:54569-54588 | None:intergenic | 35.0% | |
| !! | TTAAAGGGTGTTAGTAGTTG+CGG | - | tig0018912:54691-54710 | Msa1369800:intron | 35.0% |
| AAAAATAGAGCCAATGGTGA+TGG | - | tig0018912:54768-54787 | Msa1369800:intron | 35.0% | |
| GTCTAAATAACCATCACCAT+TGG | + | tig0018912:54781-54800 | None:intergenic | 35.0% | |
| !! | TGGTGATGGTTATTTAGACA+TGG | - | tig0018912:54782-54801 | Msa1369800:intron | 35.0% |
| GATGGTTATTTAGACATGGT+CGG | - | tig0018912:54786-54805 | Msa1369800:intron | 35.0% | |
| !!! | GGCGAGTTTTTTTTCTTTCT+TGG | - | tig0018912:54807-54826 | Msa1369800:intron | 35.0% |
| AGTTATGTCGATGACTATGA+TGG | - | tig0018912:54841-54860 | Msa1369800:intron | 35.0% | |
| GTTAGAGAGTTATTGCCTTA+TGG | - | tig0018912:54863-54882 | Msa1369800:intron | 35.0% | |
| ! | CCGTTAGATTTTGTTCTTAG+TGG | - | tig0018912:55443-55462 | Msa1369800:intron | 35.0% |
| TTCTTAGTGGAATACATGTG+TGG | - | tig0018912:55456-55475 | Msa1369800:intron | 35.0% | |
| CACATACTTTGGTTGTTACA+CGG | + | tig0018912:55937-55956 | None:intergenic | 35.0% | |
| ! | TTGATCTTTTCCACTGATGT+TGG | + | tig0018912:55975-55994 | None:intergenic | 35.0% |
| CACTAATTGACAGACATGTT+TGG | + | tig0018912:56192-56211 | None:intergenic | 35.0% | |
| ACATGTCTGTCAATTAGTGA+AGG | - | tig0018912:56193-56212 | Msa1369800:CDS | 35.0% | |
| AAAGGAAAGATGATCCCAAA+TGG | - | tig0018912:56419-56438 | Msa1369800:CDS | 35.0% | |
| CTTGCTAGTAGTTTCCATTT+GGG | + | tig0018912:56436-56455 | None:intergenic | 35.0% | |
| CTCCTTAGAATCTTATGAGA+GGG | + | tig0018912:56775-56794 | None:intergenic | 35.0% | |
| !! | GGTGTGGTCTTATTTAAGGA+AGG | + | tig0018912:53214-53233 | None:intergenic | 40.0% |
| !! | AAGGGGTGTGGTCTTATTTA+AGG | + | tig0018912:53218-53237 | None:intergenic | 40.0% |
| TTAAATAAGACCACACCCCT+TGG | - | tig0018912:53217-53236 | Msa1369800:three_prime_UTR | 40.0% | |
| !! | TGATGATTCTGAGATCCAAG+GGG | + | tig0018912:53235-53254 | None:intergenic | 40.0% |
| !! | GATGATGATTCTGAGATCCA+AGG | + | tig0018912:53237-53256 | None:intergenic | 40.0% |
| CAATTGGAGACAAACTAACC+AGG | + | tig0018912:53444-53463 | None:intergenic | 40.0% | |
| TTAACTCGGTATCCGATTCA+AGG | - | tig0018912:53476-53495 | Msa1369800:CDS | 40.0% | |
| !!! | GTCATTTTTCATTCACAGCG+CGG | + | tig0018912:53731-53750 | None:intergenic | 40.0% |
| GCTGTGAATGAAAAATGACC+TGG | - | tig0018912:53732-53751 | Msa1369800:intron | 40.0% | |
| CGTGCAACTGTAAAAAAACC+AGG | + | tig0018912:53753-53772 | None:intergenic | 40.0% | |
| !!! | GTTTTTTTACAGTTGCACGG+AGG | - | tig0018912:53754-53773 | Msa1369800:intron | 40.0% |
| !! | GCATCAAAGGTCTTGTTCAA+CGG | - | tig0018912:53852-53871 | Msa1369800:intron | 40.0% |
| ACGGTTAACATCAGAAAACG+TGG | - | tig0018912:53871-53890 | Msa1369800:intron | 40.0% | |
| GTTAACATCAGAAAACGTGG+TGG | - | tig0018912:53874-53893 | Msa1369800:intron | 40.0% | |
| GTAGCTTCATACAACGGATA+CGG | + | tig0018912:53940-53959 | None:intergenic | 40.0% | |
| TGGTGAGTAGCTTCATACAA+CGG | + | tig0018912:53946-53965 | None:intergenic | 40.0% | |
| AACGCGGTTCAAAAAACTGA+AGG | - | tig0018912:53974-53993 | Msa1369800:intron | 40.0% | |
| ACGCGGTTCAAAAAACTGAA+GGG | - | tig0018912:53975-53994 | Msa1369800:intron | 40.0% | |
| TTCAAGCACAGGATCATGTT+TGG | + | tig0018912:54014-54033 | None:intergenic | 40.0% | |
| AGGATATCAAGTTCAAGCAC+AGG | + | tig0018912:54025-54044 | None:intergenic | 40.0% | |
| TATAGAGGAGAGAGAAATCG+AGG | - | tig0018912:54220-54239 | Msa1369800:intron | 40.0% | |
| TTGGAGCATATATGTACGGA+AGG | - | tig0018912:54297-54316 | Msa1369800:intron | 40.0% | |
| TGGAGCATATATGTACGGAA+GGG | - | tig0018912:54298-54317 | Msa1369800:intron | 40.0% | |
| TAGCTAAGTTGCATTAGGCA+TGG | + | tig0018912:54564-54583 | None:intergenic | 40.0% | |
| TGTCGATGAGTGATAAAACG+TGG | - | tig0018912:54744-54763 | Msa1369800:intron | 40.0% | |
| GTCGATGAGTGATAAAACGT+GGG | - | tig0018912:54745-54764 | Msa1369800:intron | 40.0% | |
| ! | CCTTATGGTGATGATAGTGT+GGG | - | tig0018912:54878-54897 | Msa1369800:intron | 40.0% |
| TTCTCTCGCTGAAAATAGCA+TGG | + | tig0018912:55392-55411 | None:intergenic | 40.0% | |
| GTTATAATAACTCTCTCGCG+AGG | - | tig0018912:55507-55526 | Msa1369800:intron | 40.0% | |
| ATAAAGTCTCACCGTTGATC+AGG | - | tig0018912:55659-55678 | Msa1369800:CDS | 40.0% | |
| TTCAAACACGCAATTGTGTG+TGG | - | tig0018912:55780-55799 | Msa1369800:CDS | 40.0% | |
| AACGGCATCAAAATACAAGC+TGG | + | tig0018912:55861-55880 | None:intergenic | 40.0% | |
| !!! | AGCTTGTATTTTGATGCCGT+TGG | - | tig0018912:55860-55879 | Msa1369800:intron | 40.0% |
| TTTGGTTGTTACACGGTAGT+GGG | + | tig0018912:55930-55949 | None:intergenic | 40.0% | |
| CGTGTAACAACCAAAGTATG+TGG | - | tig0018912:55935-55954 | Msa1369800:intron | 40.0% | |
| ATGGACATGACCACATACTT+TGG | + | tig0018912:55948-55967 | None:intergenic | 40.0% | |
| ATTGACAGACATGTTTGGCA+TGG | + | tig0018912:56187-56206 | None:intergenic | 40.0% | |
| TGAGAATGGAGCAAGAGAAA+AGG | - | tig0018912:56401-56420 | Msa1369800:intron | 40.0% | |
| CCTTGCTAGTAGTTTCCATT+TGG | + | tig0018912:56437-56456 | None:intergenic | 40.0% | |
| CCAAATGGAAACTACTAGCA+AGG | - | tig0018912:56434-56453 | Msa1369800:CDS | 40.0% | |
| ATGGAAACTACTAGCAAGGA+AGG | - | tig0018912:56438-56457 | Msa1369800:CDS | 40.0% | |
| GGAAAACATAACCTTAGCTG+AGG | + | tig0018912:56467-56486 | None:intergenic | 40.0% | |
| ! | TTTTCTCTTAGGGAGAGACA+AGG | + | tig0018912:56488-56507 | None:intergenic | 40.0% |
| ! | AATCGTGGGATCAGATGTTT+TGG | - | tig0018912:56538-56557 | Msa1369800:intron | 40.0% |
| GGGTTTCAATTGTGTACGTA+AGG | - | tig0018912:56641-56660 | Msa1369800:intron | 40.0% | |
| TGTTAGTGGCTCTTCAATTG+AGG | - | tig0018912:56674-56693 | Msa1369800:CDS | 40.0% | |
| TCTTATGAGAGGGCAAAATG+AGG | + | tig0018912:56765-56784 | None:intergenic | 40.0% | |
| TGCCCTCTCATAAGATTCTA+AGG | - | tig0018912:56770-56789 | Msa1369800:five_prime_UTR | 40.0% | |
| CCTCCTTAGAATCTTATGAG+AGG | + | tig0018912:56776-56795 | None:intergenic | 40.0% | |
| ! | CCTCTCATAAGATTCTAAGG+AGG | - | tig0018912:56773-56792 | Msa1369800:five_prime_UTR | 40.0% |
| GAATACCCAAACCACACCAA+TGG | - | tig0018912:53345-53364 | Msa1369800:three_prime_UTR | 45.0% | |
| ACTAACCAGGATGCTTGTGT+GGG | + | tig0018912:53431-53450 | None:intergenic | 45.0% | |
| AACTAACCAGGATGCTTGTG+TGG | + | tig0018912:53432-53451 | None:intergenic | 45.0% | |
| CTACAAACCTGGATGAGTAG+AGG | + | tig0018912:53666-53685 | None:intergenic | 45.0% | |
| CAAATACGGAATCCACCTGT+TGG | - | tig0018912:53787-53806 | Msa1369800:intron | 45.0% | |
| ATACAACGGATACGGAGATC+CGG | + | tig0018912:53932-53951 | None:intergenic | 45.0% | |
| ACTCACCAATCACTTCAACG+CGG | - | tig0018912:53958-53977 | Msa1369800:intron | 45.0% | |
| TTGAACCGCGTTGAAGTGAT+TGG | + | tig0018912:53966-53985 | None:intergenic | 45.0% | |
| CGGTTCAAAAAACTGAAGGG+TGG | - | tig0018912:53978-53997 | Msa1369800:intron | 45.0% | |
| ACTTGATATCCTCCGCTTCA+TGG | - | tig0018912:54033-54052 | Msa1369800:intron | 45.0% | |
| TTTCGCTTTCGTCCATGAAG+CGG | + | tig0018912:54048-54067 | None:intergenic | 45.0% | |
| ! | GAAATCGAGGAAGCATAGAG+AGG | - | tig0018912:54233-54252 | Msa1369800:intron | 45.0% |
| GTTGTATGCGGAACTTTCTG+AGG | - | tig0018912:54263-54282 | Msa1369800:intron | 45.0% | |
| AACATGGTATGGTCCAACGT+CGG | + | tig0018912:54328-54347 | None:intergenic | 45.0% | |
| !! | CAGGTGGAGAATTTGCTACA+CGG | + | tig0018912:54372-54391 | None:intergenic | 45.0% |
| AGCAAATTCTCCACCTGTCA+AGG | - | tig0018912:54375-54394 | Msa1369800:intron | 45.0% | |
| GCAAATTCTCCACCTGTCAA+GGG | - | tig0018912:54376-54395 | Msa1369800:intron | 45.0% | |
| AACATGCAAGAAGAGGGTGA+AGG | - | tig0018912:54425-54444 | Msa1369800:intron | 45.0% | |
| ACATGCAAGAAGAGGGTGAA+GGG | - | tig0018912:54426-54445 | Msa1369800:intron | 45.0% | |
| CTTGCAATGTTCCTCTTTGC+AGG | - | tig0018912:54523-54542 | Msa1369800:intron | 45.0% | |
| CGTGGGAAAAATAGAGCCAA+TGG | - | tig0018912:54762-54781 | Msa1369800:intron | 45.0% | |
| ! | GCCTTATGGTGATGATAGTG+TGG | - | tig0018912:54877-54896 | Msa1369800:intron | 45.0% |
| CCCACACTATCATCACCATA+AGG | + | tig0018912:54881-54900 | None:intergenic | 45.0% | |
| ! | TATGGTGATGATAGTGTGGG+TGG | - | tig0018912:54881-54900 | Msa1369800:intron | 45.0% |
| CTTTGGTTGTTACACGGTAG+TGG | + | tig0018912:55931-55950 | None:intergenic | 45.0% | |
| !! | TTCCACTGATGTTGGTGTCA+TGG | + | tig0018912:55967-55986 | None:intergenic | 45.0% |
| TACCTTCAACTTGGGAAGCA+TGG | - | tig0018912:56152-56171 | Msa1369800:CDS | 45.0% | |
| ! | AACCATGCTTCCCAAGTTGA+AGG | + | tig0018912:56157-56176 | None:intergenic | 45.0% |
| AGAGTGACCATAGACAATCG+TGG | - | tig0018912:56523-56542 | Msa1369800:CDS | 45.0% | |
| GAGTGACCATAGACAATCGT+GGG | - | tig0018912:56524-56543 | Msa1369800:intron | 45.0% | |
| TCTGATCCCACGATTGTCTA+TGG | + | tig0018912:56533-56552 | None:intergenic | 45.0% | |
| !! | ATTCTGAGATCCAAGGGGTG+TGG | + | tig0018912:53230-53249 | None:intergenic | 50.0% |
| TACCCAAACCACACCAATGG+AGG | - | tig0018912:53348-53367 | Msa1369800:three_prime_UTR | 50.0% | |
| GACCTCCATTGGTGTGGTTT+GGG | + | tig0018912:53353-53372 | None:intergenic | 50.0% | |
| TAAGACGACCTCCATTGGTG+TGG | + | tig0018912:53359-53378 | None:intergenic | 50.0% | |
| CTCGAAAACAGGAGATACCG+AGG | + | tig0018912:53548-53567 | None:intergenic | 50.0% | |
| TGGAAGGAACGCCGTGAATT+TGG | + | tig0018912:53618-53637 | None:intergenic | 50.0% | |
| GTAGCCGATGAAAGCGGTTA+CGG | + | tig0018912:53644-53663 | None:intergenic | 50.0% | |
| GTAGAGGTAGCCGATGAAAG+CGG | + | tig0018912:53650-53669 | None:intergenic | 50.0% | |
| CAGTTGCACGGAGGATGAAA+TGG | - | tig0018912:53763-53782 | Msa1369800:intron | 50.0% | |
| ACACGTGAGATAGTGCCAAC+AGG | + | tig0018912:53805-53824 | None:intergenic | 50.0% | |
| ! | GCACAGGATCATGTTTGGTG+AGG | + | tig0018912:54009-54028 | None:intergenic | 50.0% |
| ! | AGGAAGCATAGAGAGGAGCA+AGG | - | tig0018912:54240-54259 | Msa1369800:intron | 50.0% |
| ! | GGAAGCATAGAGAGGAGCAA+GGG | - | tig0018912:54241-54260 | Msa1369800:intron | 50.0% |
| AGAGGAGCAAGGGTTGTATG+CGG | - | tig0018912:54251-54270 | Msa1369800:intron | 50.0% | |
| !! | TTCTGAGGCGATGGAGTGTT+TGG | - | tig0018912:54278-54297 | Msa1369800:intron | 50.0% |
| CGTTGGACCATACCATGTTG+AGG | - | tig0018912:54329-54348 | Msa1369800:intron | 50.0% | |
| ! | ATGATAGTGTGGGTGGTGGT+CGG | - | tig0018912:54888-54907 | Msa1369800:intron | 50.0% |
| TGGTCACACCAACACACTCA+CGG | - | tig0018912:55294-55313 | Msa1369800:intron | 50.0% | |
| AATGGATGCCGTGAGTGTGT+TGG | + | tig0018912:55305-55324 | None:intergenic | 50.0% | |
| ! | CACACTCACGGCATCCATTT+TGG | - | tig0018912:55306-55325 | Msa1369800:intron | 50.0% |
| TAACTCTCTCGCGAGGTTGT+CGG | - | tig0018912:55514-55533 | Msa1369800:intron | 50.0% | |
| GACTACGATCGATGGACCAA+CGG | + | tig0018912:55879-55898 | None:intergenic | 50.0% | |
| GTCCATGACACCAACATCAG+TGG | - | tig0018912:55962-55981 | Msa1369800:intron | 50.0% | |
| AAGGAAGGTTGCCTCAGCTA+AGG | - | tig0018912:56453-56472 | Msa1369800:CDS | 50.0% | |
| CGACCTCCATTGGTGTGGTT+TGG | + | tig0018912:53354-53373 | None:intergenic | 55.0% | |
| TCGGGTAAGACGACCTCCAT+TGG | + | tig0018912:53364-53383 | None:intergenic | 55.0% | |
| TCGGAGCTGCGTTGTTTACG+CGG | + | tig0018912:53586-53605 | None:intergenic | 55.0% | |
| ACCGCCGTAACCGCTTTCAT+CGG | - | tig0018912:53637-53656 | Msa1369800:CDS | 55.0% | |
| TCGGCTACCTCTACTCATCC+AGG | - | tig0018912:53656-53675 | Msa1369800:CDS | 55.0% | |
| CGTGAGATAGTGCCAACAGG+TGG | + | tig0018912:53802-53821 | None:intergenic | 55.0% | |
| TGGATGTACTCCAACTCGCC+AGG | - | tig0018912:53894-53913 | Msa1369800:intron | 55.0% | |
| !! | TGCGGAACTTTCTGAGGCGA+TGG | - | tig0018912:54269-54288 | Msa1369800:intron | 55.0% |
| AAGCTGAAGCCCTTGACAGG+TGG | + | tig0018912:54388-54407 | None:intergenic | 55.0% | |
| CAGAAGCTGAAGCCCTTGAC+AGG | + | tig0018912:54391-54410 | None:intergenic | 55.0% | |
| TGCAAGAAGAGGGTGAAGGG+AGG | - | tig0018912:54429-54448 | Msa1369800:intron | 55.0% | |
| ! | GCTGGAGGTGCAAACGTATG+TGG | - | tig0018912:54454-54473 | Msa1369800:intron | 55.0% |
| ! | GGTGATGATAGTGTGGGTGG+TGG | - | tig0018912:54884-54903 | Msa1369800:intron | 55.0% |
| AACTCTCTCGCGAGGTTGTC+GGG | - | tig0018912:55515-55534 | Msa1369800:intron | 55.0% | |
| TCCAGCCCACACAAGCATCC+TGG | - | tig0018912:53423-53442 | Msa1369800:three_prime_UTR | 60.0% | |
| ACCAGGATGCTTGTGTGGGC+TGG | + | tig0018912:53427-53446 | None:intergenic | 60.0% | |
| AAAGCGGTTACGGCGGTGGA+AGG | + | tig0018912:53634-53653 | None:intergenic | 60.0% | |
| GATGAAAGCGGTTACGGCGG+TGG | + | tig0018912:53638-53657 | None:intergenic | 60.0% | |
| GCCGATGAAAGCGGTTACGG+CGG | + | tig0018912:53641-53660 | None:intergenic | 60.0% | |
| CGCTTTCGTCCATGAAGCGG+AGG | + | tig0018912:54045-54064 | None:intergenic | 60.0% | |
| CATCGCAGAGCCTGGCGAGT+TGG | + | tig0018912:53907-53926 | None:intergenic | 65.0% | |
| ATCCGGTGCATCGCAGAGCC+TGG | + | tig0018912:53915-53934 | None:intergenic | 65.0% | |
| ! | ACGGAAGGGTGCACCGACGT+TGG | - | tig0018912:54312-54331 | Msa1369800:intron | 65.0% |
| AGAGGGTGAAGGGAGGCTGC+TGG | - | tig0018912:54436-54455 | Msa1369800:intron | 65.0% | |
| CGCCAGGCTCTGCGATGCAC+CGG | - | tig0018912:53910-53929 | Msa1369800:intron | 70.0% | |
| GGGTGAAGGGAGGCTGCTGG+AGG | - | tig0018912:54439-54458 | Msa1369800:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018912 | gene | 53192 | 56894 | 53192 | ID=Msa1369800;Name=Msa1369800 |
| tig0018912 | mRNA | 53192 | 56894 | 53192 | ID=Msa1369800-mRNA-1;Parent=Msa1369800;Name=Msa1369800-mRNA-1;_AED=0.07;_eAED=0.07;_QI=145|1|1|1|1|1|5|279|363 |
| tig0018912 | exon | 53192 | 53696 | 53192 | ID=Msa1369800-mRNA-1:exon:1350;Parent=Msa1369800-mRNA-1 |
| tig0018912 | exon | 55542 | 55861 | 55542 | ID=Msa1369800-mRNA-1:exon:1349;Parent=Msa1369800-mRNA-1 |
| tig0018912 | exon | 56017 | 56320 | 56017 | ID=Msa1369800-mRNA-1:exon:1348;Parent=Msa1369800-mRNA-1 |
| tig0018912 | exon | 56409 | 56542 | 56409 | ID=Msa1369800-mRNA-1:exon:1347;Parent=Msa1369800-mRNA-1 |
| tig0018912 | exon | 56642 | 56894 | 56642 | ID=Msa1369800-mRNA-1:exon:1346;Parent=Msa1369800-mRNA-1 |
| tig0018912 | five_prime_UTR | 56750 | 56894 | 56750 | ID=Msa1369800-mRNA-1:five_prime_utr;Parent=Msa1369800-mRNA-1 |
| tig0018912 | CDS | 56642 | 56749 | 56642 | ID=Msa1369800-mRNA-1:cds;Parent=Msa1369800-mRNA-1 |
| tig0018912 | CDS | 56409 | 56542 | 56409 | ID=Msa1369800-mRNA-1:cds;Parent=Msa1369800-mRNA-1 |
| tig0018912 | CDS | 56017 | 56320 | 56017 | ID=Msa1369800-mRNA-1:cds;Parent=Msa1369800-mRNA-1 |
| tig0018912 | CDS | 55542 | 55861 | 55542 | ID=Msa1369800-mRNA-1:cds;Parent=Msa1369800-mRNA-1 |
| tig0018912 | CDS | 53471 | 53696 | 53471 | ID=Msa1369800-mRNA-1:cds;Parent=Msa1369800-mRNA-1 |
| tig0018912 | three_prime_UTR | 53192 | 53470 | 53192 | ID=Msa1369800-mRNA-1:three_prime_utr;Parent=Msa1369800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
