Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258870 | XP_003608891.1 | 97.796 | 363 | 7 | 1 | 1 | 363 | 1 | 362 | 0.0 | 744 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258870 | sp|Q94BN0|BT2_ARATH | 61.515 | 330 | 114 | 6 | 15 | 332 | 32 | 360 | 2.00e-132 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258870 | G7JMM8 | 97.796 | 363 | 7 | 1 | 1 | 363 | 1 | 362 | 0.0 | 744 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1258870 | TR | TAZ |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1258870 | Msa1330140 | 0.939381 | 1.398597e-99 | -8.615850e-47 |
| Msa1258870 | Msa1330150 | 0.929768 | 4.325698e-93 | -8.615850e-47 |
| Msa1258870 | Msa1330200 | 0.915455 | 5.767389e-85 | -8.615850e-47 |
| Msa1258870 | Msa1369800 | 0.931953 | 1.759222e-94 | -8.615850e-47 |
| Msa1208560 | Msa1258870 | 0.930443 | 1.626524e-93 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258870 | MtrunA17_Chr4g0058071 | 97.796 | 363 | 7 | 1 | 1 | 363 | 1 | 362 | 0.0 | 744 |
| Msa1258870 | MtrunA17_Chr3g0116501 | 58.621 | 203 | 81 | 2 | 87 | 289 | 1 | 200 | 1.57e-86 | 260 |
| Msa1258870 | MtrunA17_Chr5g0401281 | 45.973 | 298 | 154 | 7 | 18 | 313 | 68 | 360 | 1.56e-84 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258870 | AT3G48360.1 | 61.515 | 330 | 114 | 6 | 15 | 332 | 32 | 360 | 2.03e-133 | 385 |
| Msa1258870 | AT5G63160.1 | 62.540 | 315 | 108 | 5 | 14 | 319 | 22 | 335 | 2.64e-130 | 377 |
| Msa1258870 | AT3G48360.2 | 63.636 | 286 | 92 | 5 | 15 | 289 | 32 | 316 | 3.39e-120 | 351 |
| Msa1258870 | AT5G63160.2 | 63.732 | 284 | 94 | 4 | 14 | 289 | 22 | 304 | 3.16e-119 | 347 |
| Msa1258870 | AT5G63160.3 | 64.634 | 246 | 79 | 4 | 81 | 319 | 6 | 250 | 8.10e-104 | 307 |
| Msa1258870 | AT3G48360.3 | 62.745 | 255 | 85 | 4 | 87 | 332 | 1 | 254 | 1.59e-103 | 305 |
| Msa1258870 | AT5G67480.1 | 45.364 | 302 | 159 | 6 | 18 | 317 | 61 | 358 | 7.24e-83 | 257 |
| Msa1258870 | AT5G67480.3 | 45.364 | 302 | 159 | 6 | 18 | 317 | 61 | 358 | 7.24e-83 | 257 |
| Msa1258870 | AT5G67480.2 | 45.364 | 302 | 159 | 6 | 18 | 317 | 72 | 369 | 9.61e-83 | 257 |
| Msa1258870 | AT4G37610.1 | 42.904 | 303 | 164 | 8 | 18 | 317 | 56 | 352 | 6.86e-76 | 239 |
| Msa1258870 | AT1G05690.1 | 41.528 | 301 | 170 | 5 | 18 | 317 | 55 | 350 | 1.82e-74 | 235 |
| Msa1258870 | AT1G55760.1 | 33.835 | 133 | 79 | 4 | 18 | 147 | 165 | 291 | 6.35e-13 | 69.3 |
| Msa1258870 | AT3G56230.1 | 24.845 | 161 | 120 | 1 | 25 | 184 | 120 | 280 | 2.11e-12 | 67.4 |
Find 118 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGGGGTGGTCTTATTTA+AGG | 0.172362 | 8_2:-60191577 | None:intergenic |
| TGGAAGGAACGCCGTGAATT+TGG | 0.203367 | 8_2:-60191976 | None:intergenic |
| CCTGCAATGTTCCTCTTTGC+AGG | 0.238918 | 8_2:+60192890 | Msa1258870:CDS |
| TGCCCTCTCATAAGATTCTA+AGG | 0.266164 | 8_2:+60195336 | Msa1258870:three_prime_UTR |
| CCTTGCTAGTAGTTTCCATT+TGG | 0.271352 | 8_2:-60195000 | None:intergenic |
| GTGAATTTGGATTATTCTTT+CGG | 0.293435 | 8_2:-60191963 | None:intergenic |
| ATGAATAAAGACATCATATT+CGG | 0.296060 | 8_2:-60191741 | None:intergenic |
| TTTGCTTGAAATGTAAATTT+TGG | 0.310791 | 8_2:+60195280 | Msa1258870:three_prime_UTR |
| TTATAAATTTAGTGATTATT+CGG | 0.311689 | 8_2:+60195437 | Msa1258870:three_prime_UTR |
| TTCTGAGGCGATGGAGTGTT+TGG | 0.329039 | 8_2:+60192645 | Msa1258870:CDS |
| ACTTGATATCCTCCGCTTCA+TGG | 0.330110 | 8_2:+60192394 | Msa1258870:CDS |
| GACCTCCATTGGTGTGGTTT+GGG | 0.335478 | 8_2:-60191711 | None:intergenic |
| AAGGTTATTGTTAGTGTTAG+TGG | 0.335935 | 8_2:+60195226 | Msa1258870:three_prime_UTR |
| CTTGCTAGTAGTTTCCATTT+GGG | 0.348881 | 8_2:-60194999 | None:intergenic |
| AATCGTGGGATCAGATGTTT+TGG | 0.358065 | 8_2:+60195104 | Msa1258870:CDS |
| ATTTAAGGAAGGGAAGATAT+TGG | 0.363883 | 8_2:-60191562 | None:intergenic |
| CGACCTCCATTGGTGTGGTT+TGG | 0.364602 | 8_2:-60191712 | None:intergenic |
| TGCAGGAATCATCAGTTTGT+TGG | 0.398692 | 8_2:-60192873 | None:intergenic |
| TCTGATCCCACGATTGTCTA+TGG | 0.399851 | 8_2:-60195096 | None:intergenic |
| TCAATAATGTTCTCGAAAAC+AGG | 0.405232 | 8_2:-60191917 | None:intergenic |
| CAGTTGCACGGAGGATGAAA+TGG | 0.408781 | 8_2:+60192124 | Msa1258870:intron |
| AGAGGGTGAAGGGAGGCTGC+TGG | 0.412837 | 8_2:+60192803 | Msa1258870:CDS |
| AGGAGAATTATTGTGATGTT+TGG | 0.418373 | 8_2:-60191658 | None:intergenic |
| TGGGTAGGAAAGGGGAATGA+TGG | 0.430202 | 8_2:-60191613 | None:intergenic |
| ACCAGGATGCTTGTGTGGGC+TGG | 0.439380 | 8_2:-60191785 | None:intergenic |
| TTCAAGCACAGGATCATGTT+TGG | 0.441776 | 8_2:-60192372 | None:intergenic |
| CCTGCAAAGAGGAACATTGC+AGG | 0.447506 | 8_2:-60192890 | None:intergenic |
| CGCCAGGCTCTGCGATGCAC+CGG | 0.448288 | 8_2:+60192271 | Msa1258870:CDS |
| CAGACAATTTCAATTGAGAA+TGG | 0.449145 | 8_2:+60194953 | Msa1258870:intron |
| CATGTGTTGTAGATTGAAAG+AGG | 0.450361 | 8_2:-60191678 | None:intergenic |
| TGAATAAAGACATCATATTC+GGG | 0.450560 | 8_2:-60191740 | None:intergenic |
| TTATTAACCTCAACATGGTA+TGG | 0.459852 | 8_2:-60192703 | None:intergenic |
| TTGAACCGCGTTGAAGTGAT+TGG | 0.469408 | 8_2:-60192324 | None:intergenic |
| TGAGAATGGAGCAAGAGAAA+AGG | 0.470643 | 8_2:+60194967 | Msa1258870:CDS |
| GTCTTTATTCATACTTCTGA+TGG | 0.471148 | 8_2:+60191752 | Msa1258870:CDS |
| GATGAAAGCGGTTACGGCGG+TGG | 0.476910 | 8_2:-60191996 | None:intergenic |
| GTAGCCGATGAAAGCGGTTA+CGG | 0.477754 | 8_2:-60192002 | None:intergenic |
| AGCAAATTCTCCACCTGTCA+AGG | 0.481574 | 8_2:+60192742 | Msa1258870:CDS |
| TGTTAGTGGCTCTTCAATTG+AGG | 0.489370 | 8_2:+60195240 | Msa1258870:three_prime_UTR |
| AAAGGAAAGATGATCCCAAA+TGG | 0.490170 | 8_2:+60194985 | Msa1258870:CDS |
| CAGAAGCTGAAGCCCTTGAC+AGG | 0.502805 | 8_2:-60192755 | None:intergenic |
| AACTAACCAGGATGCTTGTG+TGG | 0.507204 | 8_2:-60191790 | None:intergenic |
| CTCTTTCAATCTACAACACA+TGG | 0.509417 | 8_2:+60191679 | Msa1258870:exon |
| CATCGCAGAGCCTGGCGAGT+TGG | 0.510849 | 8_2:-60192265 | None:intergenic |
| GGGTTTCAATTGTGTACGTA+AGG | 0.511616 | 8_2:+60195207 | Msa1258870:three_prime_UTR |
| TGCGGAACTTTCTGAGGCGA+TGG | 0.528118 | 8_2:+60192636 | Msa1258870:CDS |
| TCGGCTACCTCTACTCATCC+AGG | 0.528548 | 8_2:+60192017 | Msa1258870:CDS |
| TATAGAGGAGAGAGAAATCG+AGG | 0.529791 | 8_2:+60192587 | Msa1258870:intron |
| GAAAGAATAATCCAAATTCA+CGG | 0.535992 | 8_2:+60191965 | Msa1258870:CDS |
| TCCAGCCCACACAAGCATCC+TGG | 0.542058 | 8_2:+60191784 | Msa1258870:CDS |
| CTCAAACAAAGATGCATCAA+AGG | 0.544591 | 8_2:+60192200 | Msa1258870:CDS |
| CCTTAAATAAGACCACCCCT+TGG | 0.544636 | 8_2:+60191577 | Msa1258870:five_prime_UTR |
| TCGGGTAAGACGACCTCCAT+TGG | 0.548298 | 8_2:-60191722 | None:intergenic |
| GTGTTTGGAGCATATATGTA+CGG | 0.548333 | 8_2:+60192660 | Msa1258870:CDS |
| GAGGATGAAATGGACAAATA+CGG | 0.550313 | 8_2:+60192134 | Msa1258870:CDS |
| ACCGCCGTAACCGCTTTCAT+CGG | 0.550954 | 8_2:+60191998 | Msa1258870:CDS |
| ACACGTGAGATAGTGCCAAC+AGG | 0.553618 | 8_2:-60192163 | None:intergenic |
| ACATGCAAGAAGAGGGTGAA+GGG | 0.559984 | 8_2:+60192793 | Msa1258870:CDS |
| ATGGAAACTACTAGCAAGGA+AGG | 0.562140 | 8_2:+60195004 | Msa1258870:CDS |
| TGGATGTACTCCAACTCGCC+AGG | 0.562979 | 8_2:+60192255 | Msa1258870:CDS |
| CGCTTTCGTCCATGAAGCGG+AGG | 0.563948 | 8_2:-60192403 | None:intergenic |
| ATGCATCTTTGTTTGAGTTG+CGG | 0.567744 | 8_2:-60192194 | None:intergenic |
| GGGTGAAGGGAGGCTGCTGG+AGG | 0.568462 | 8_2:+60192806 | Msa1258870:CDS |
| TTTCGCTTTCGTCCATGAAG+CGG | 0.570395 | 8_2:-60192406 | None:intergenic |
| AAAGCGGTTACGGCGGTGGA+AGG | 0.571422 | 8_2:-60191992 | None:intergenic |
| GCATCAAAGGTCTTGTTCAA+CGG | 0.574251 | 8_2:+60192213 | Msa1258870:CDS |
| CAAATACGGAATCCACCTGT+TGG | 0.576636 | 8_2:+60192148 | Msa1258870:CDS |
| GGGGTGGTCTTATTTAAGGA+AGG | 0.576906 | 8_2:-60191573 | None:intergenic |
| AAGGAAGGTTGCCTCAGCTA+AGG | 0.578016 | 8_2:+60195019 | Msa1258870:CDS |
| ATGGATGATTCTGAGATCCA+AGG | 0.583285 | 8_2:-60191594 | None:intergenic |
| CCAAATGGAAACTACTAGCA+AGG | 0.585999 | 8_2:+60195000 | Msa1258870:CDS |
| CTCCTTAGAATCTTATGAGA+GGG | 0.589078 | 8_2:-60195338 | None:intergenic |
| TTGGAGCATATATGTACGGA+AGG | 0.591498 | 8_2:+60192664 | Msa1258870:CDS |
| AGGATATCAAGTTCAAGCAC+AGG | 0.591612 | 8_2:-60192383 | None:intergenic |
| GGAAGCATAGAGAGGAGCAA+GGG | 0.591806 | 8_2:+60192608 | Msa1258870:CDS |
| ATACAACGGATACGGAGATC+CGG | 0.598941 | 8_2:-60192290 | None:intergenic |
| GGGTGGTCTTATTTAAGGAA+GGG | 0.601245 | 8_2:-60191572 | None:intergenic |
| GCAAATTCTCCACCTGTCAA+GGG | 0.602836 | 8_2:+60192743 | Msa1258870:CDS |
| GTTGTATGCGGAACTTTCTG+AGG | 0.605270 | 8_2:+60192630 | Msa1258870:CDS |
| GTAGCTTCATACAACGGATA+CGG | 0.605346 | 8_2:-60192298 | None:intergenic |
| GAATACCCAAACCACACCAA+TGG | 0.607266 | 8_2:+60191706 | Msa1258870:CDS |
| TGGATGATTCTGAGATCCAA+GGG | 0.608581 | 8_2:-60191593 | None:intergenic |
| TCGGAGCTGCGTTGTTTACG+CGG | 0.613669 | 8_2:-60191944 | None:intergenic |
| AAGCTGAAGCCCTTGACAGG+TGG | 0.613763 | 8_2:-60192752 | None:intergenic |
| AGGAAGCATAGAGAGGAGCA+AGG | 0.616562 | 8_2:+60192607 | Msa1258870:CDS |
| TAAACAACTAACCTGCAAAG+AGG | 0.620623 | 8_2:-60192901 | None:intergenic |
| CCTCCTTAGAATCTTATGAG+AGG | 0.623054 | 8_2:-60195339 | None:intergenic |
| CAGGTGGAGAATTTGCTACA+CGG | 0.624063 | 8_2:-60192736 | None:intergenic |
| CGTTGGACCATACCATGTTG+AGG | 0.625619 | 8_2:+60192696 | Msa1258870:CDS |
| TACCCAAACCACACCAATGG+AGG | 0.626720 | 8_2:+60191709 | Msa1258870:CDS |
| TAAGACGACCTCCATTGGTG+TGG | 0.627752 | 8_2:-60191717 | None:intergenic |
| TCTTATGAGAGGGCAAAATG+AGG | 0.633014 | 8_2:-60195328 | None:intergenic |
| CTACAAACCTGGATGAGTAG+AGG | 0.636623 | 8_2:-60192024 | None:intergenic |
| ATATTGTAACAATAATGTCT+CGG | 0.638704 | 8_2:+60195136 | Msa1258870:CDS |
| GCTGGAGGTGCAAACGTATG+TGG | 0.643612 | 8_2:+60192821 | Msa1258870:CDS |
| TTTCTTTATTAACCTCAACA+TGG | 0.646312 | 8_2:-60192708 | None:intergenic |
| GAAATCGAGGAAGCATAGAG+AGG | 0.652687 | 8_2:+60192600 | Msa1258870:CDS |
| GCACAGGATCATGTTTGGTG+AGG | 0.659496 | 8_2:-60192367 | None:intergenic |
| GAGTGACCATAGACAATCGT+GGG | 0.660262 | 8_2:+60195090 | Msa1258870:CDS |
| GCCGATGAAAGCGGTTACGG+CGG | 0.661788 | 8_2:-60191999 | None:intergenic |
| TGCAAGAAGAGGGTGAAGGG+AGG | 0.663791 | 8_2:+60192796 | Msa1258870:CDS |
| CGTGAGATAGTGCCAACAGG+TGG | 0.667055 | 8_2:-60192160 | None:intergenic |
| TGATTCTGAGATCCAAGGGG+TGG | 0.667532 | 8_2:-60191589 | None:intergenic |
| GGAAAACATAACCTTAGCTG+AGG | 0.673989 | 8_2:-60195030 | None:intergenic |
| GTAGAGGTAGCCGATGAAAG+CGG | 0.674697 | 8_2:-60192008 | None:intergenic |
| AACATGCAAGAAGAGGGTGA+AGG | 0.677915 | 8_2:+60192792 | Msa1258870:CDS |
| TGGAGCATATATGTACGGAA+GGG | 0.681205 | 8_2:+60192665 | Msa1258870:CDS |
| CCTCTCATAAGATTCTAAGG+AGG | 0.681421 | 8_2:+60195339 | Msa1258870:three_prime_UTR |
| AGAGGAGCAAGGGTTGTATG+CGG | 0.686478 | 8_2:+60192618 | Msa1258870:CDS |
| TGGTGAGTAGCTTCATACAA+CGG | 0.689964 | 8_2:-60192304 | None:intergenic |
| ACTAACCAGGATGCTTGTGT+GGG | 0.692654 | 8_2:-60191789 | None:intergenic |
| CTCGAAAACAGGAGATACCG+AGG | 0.700797 | 8_2:-60191906 | None:intergenic |
| AGAGTGACCATAGACAATCG+TGG | 0.708473 | 8_2:+60195089 | Msa1258870:CDS |
| ACGGTTAACATCAGAAAACG+TGG | 0.721632 | 8_2:+60192232 | Msa1258870:CDS |
| AACATGGTATGGTCCAACGT+CGG | 0.721753 | 8_2:-60192692 | None:intergenic |
| GTTAACATCAGAAAACGTGG+TGG | 0.747454 | 8_2:+60192235 | Msa1258870:CDS |
| GGATGATTCTGAGATCCAAG+GGG | 0.798448 | 8_2:-60191592 | None:intergenic |
| ACTCACCAATCACTTCAACG+CGG | 0.835800 | 8_2:+60192319 | Msa1258870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACAATATACAATAAATTAA+CGG | - | chr8_2:60194290-60194309 | None:intergenic | 10.0% |
| !! | TATATTGTATATTTGTATAT+GGG | + | chr8_2:60194301-60194320 | Msa1258870:intron | 10.0% |
| !!! | AGATATTTATTAATTTTGAT+GGG | - | chr8_2:60194786-60194805 | None:intergenic | 10.0% |
| !!! | TAGATATTTATTAATTTTGA+TGG | - | chr8_2:60194787-60194806 | None:intergenic | 10.0% |
| !!! | AAATAATTAAGCTATTTTTT+TGG | + | chr8_2:60194923-60194942 | Msa1258870:intron | 10.0% |
| !! | TTATAAATTTAGTGATTATT+CGG | + | chr8_2:60195437-60195456 | Msa1258870:three_prime_UTR | 10.0% |
| !! | ATAATCATGGAATTAATTAA+AGG | + | chr8_2:60193042-60193061 | Msa1258870:intron | 15.0% |
| !! | TAATCATGGAATTAATTAAA+GGG | + | chr8_2:60193043-60193062 | Msa1258870:intron | 15.0% |
| !!! | ACTTATTTTATATTTGAGAT+TGG | + | chr8_2:60193404-60193423 | Msa1258870:intron | 15.0% |
| !!! | AATTTCATTTTTGTTTAGAT+GGG | + | chr8_2:60193635-60193654 | Msa1258870:intron | 15.0% |
| !! | CATTAATTATTTCATAATCA+AGG | - | chr8_2:60194045-60194064 | None:intergenic | 15.0% |
| !!! | ATGTTCAAATATTCTTTTTT+AGG | - | chr8_2:60194133-60194152 | None:intergenic | 15.0% |
| !! | GTATATTGTATATTTGTATA+TGG | + | chr8_2:60194300-60194319 | Msa1258870:intron | 15.0% |
| !! | ATATTGTATATTTGTATATG+GGG | + | chr8_2:60194302-60194321 | Msa1258870:intron | 15.0% |
| !!! | TTTTTAGAGTTTATGGTTTT+GGG | - | chr8_2:60191635-60191654 | None:intergenic | 20.0% |
| !!! | TTTTTTAGAGTTTATGGTTT+TGG | - | chr8_2:60191636-60191655 | None:intergenic | 20.0% |
| !! | ATGAATAAAGACATCATATT+CGG | - | chr8_2:60191744-60191763 | None:intergenic | 20.0% |
| !! | TTAAGAAAAATACGAACAAT+TGG | - | chr8_2:60191821-60191840 | None:intergenic | 20.0% |
| !! | GTTGTAAATCAATAATTAAC+AGG | + | chr8_2:60191883-60191902 | Msa1258870:intron | 20.0% |
| !! | TGATTATTATTGTGTTATAG+AGG | + | chr8_2:60192572-60192591 | Msa1258870:intron | 20.0% |
| !! | TTATTTCGGTCATAAATATA+AGG | + | chr8_2:60193322-60193341 | Msa1258870:intron | 20.0% |
| !!! | TATTTTATATTTGAGATTGG+AGG | + | chr8_2:60193407-60193426 | Msa1258870:intron | 20.0% |
| !!! | CAATTTCATTTTTGTTTAGA+TGG | + | chr8_2:60193634-60193653 | Msa1258870:intron | 20.0% |
| !!! | TAAGTCTCTTGATATTTTTA+GGG | + | chr8_2:60194395-60194414 | Msa1258870:intron | 20.0% |
| !!! | CTAATTTTATAGAGATGAAT+CGG | + | chr8_2:60194631-60194650 | Msa1258870:intron | 20.0% |
| !! | ATATTGTAACAATAATGTCT+CGG | + | chr8_2:60195136-60195155 | Msa1258870:CDS | 20.0% |
| !!! | TTTGCTTGAAATGTAAATTT+TGG | + | chr8_2:60195280-60195299 | Msa1258870:three_prime_UTR | 20.0% |
| !!! | TTGGTGTTTTTTAGAGTTTA+TGG | - | chr8_2:60191642-60191661 | None:intergenic | 25.0% |
| ! | TGAATAAAGACATCATATTC+GGG | - | chr8_2:60191743-60191762 | None:intergenic | 25.0% |
| !! | TGTTCGTATTTTTCTTAACT+CGG | + | chr8_2:60191823-60191842 | Msa1258870:intron | 25.0% |
| ! | GTGAATTTGGATTATTCTTT+CGG | - | chr8_2:60191966-60191985 | None:intergenic | 25.0% |
| ! | GAAAGAATAATCCAAATTCA+CGG | + | chr8_2:60191965-60191984 | Msa1258870:CDS | 25.0% |
| ! | TTTCTTTATTAACCTCAACA+TGG | - | chr8_2:60192711-60192730 | None:intergenic | 25.0% |
| !! | AGCTCTAACAAAAGATTATA+AGG | - | chr8_2:60192985-60193004 | None:intergenic | 25.0% |
| ! | AGAATAGTACATCATAATCA+TGG | + | chr8_2:60193029-60193048 | Msa1258870:intron | 25.0% |
| !!! | GTTGTTGCGATTTTTTATTT+CGG | + | chr8_2:60193308-60193327 | Msa1258870:intron | 25.0% |
| ! | AAAGCTGATGTATTTGATTA+AGG | + | chr8_2:60193359-60193378 | Msa1258870:intron | 25.0% |
| !!! | TTTTGTTTAGATGGGTAAAA+TGG | + | chr8_2:60193643-60193662 | Msa1258870:intron | 25.0% |
| !!! | AGAAACTATTTTGACCAAAA+TGG | - | chr8_2:60193692-60193711 | None:intergenic | 25.0% |
| ! | TTTCTCGAGAAATTCTAATA+TGG | - | chr8_2:60193956-60193975 | None:intergenic | 25.0% |
| ! | TGAACATTGCAATATTTGAT+TGG | - | chr8_2:60194329-60194348 | None:intergenic | 25.0% |
| !! | CTAAGTCTCTTGATATTTTT+AGG | + | chr8_2:60194394-60194413 | Msa1258870:intron | 25.0% |
| ! | AAGGTAGCTAATAATAACTT+GGG | - | chr8_2:60194704-60194723 | None:intergenic | 25.0% |
| !!! | TGCCTTATCTTATTTTGAAA+AGG | + | chr8_2:60195185-60195204 | Msa1258870:three_prime_UTR | 25.0% |
| !!! | GCCTTATCTTATTTTGAAAA+GGG | + | chr8_2:60195186-60195205 | Msa1258870:three_prime_UTR | 25.0% |
| !!! | CCTTATCTTATTTTGAAAAG+GGG | + | chr8_2:60195187-60195206 | Msa1258870:three_prime_UTR | 25.0% |
| ATTTAAGGAAGGGAAGATAT+TGG | - | chr8_2:60191565-60191584 | None:intergenic | 30.0% | |
| AGGAGAATTATTGTGATGTT+TGG | - | chr8_2:60191661-60191680 | None:intergenic | 30.0% | |
| GTCTTTATTCATACTTCTGA+TGG | + | chr8_2:60191752-60191771 | Msa1258870:CDS | 30.0% | |
| ATAATCGTTAGTCCTTGAAT+CGG | - | chr8_2:60191852-60191871 | None:intergenic | 30.0% | |
| AATCAATAATTAACAGGCCT+CGG | + | chr8_2:60191889-60191908 | Msa1258870:intron | 30.0% | |
| TCAATAATGTTCTCGAAAAC+AGG | - | chr8_2:60191920-60191939 | None:intergenic | 30.0% | |
| ATATACAAGTACTACAAACC+TGG | - | chr8_2:60192038-60192057 | None:intergenic | 30.0% | |
| TTATTAACCTCAACATGGTA+TGG | - | chr8_2:60192706-60192725 | None:intergenic | 30.0% | |
| ! | TAGAGAGTTATTGCCTTTTA+TGG | + | chr8_2:60193232-60193251 | Msa1258870:intron | 30.0% |
| !! | TTTTATGGTGATGATAGTGT+GGG | + | chr8_2:60193247-60193266 | Msa1258870:intron | 30.0% |
| AATCGCAACAACATTTGTAT+GGG | - | chr8_2:60193300-60193319 | None:intergenic | 30.0% | |
| AAATCGCAACAACATTTGTA+TGG | - | chr8_2:60193301-60193320 | None:intergenic | 30.0% | |
| GATCGATTGTTACTCTTAAA+CGG | + | chr8_2:60193443-60193462 | Msa1258870:intron | 30.0% | |
| AAGACCAAGTAAATAGTCTT+TGG | + | chr8_2:60193806-60193825 | Msa1258870:intron | 30.0% | |
| GTGACCAAACACTATTTATT+TGG | + | chr8_2:60193922-60193941 | Msa1258870:intron | 30.0% | |
| GAGACCAAATAAATAGTGTT+TGG | - | chr8_2:60193929-60193948 | None:intergenic | 30.0% | |
| GAAAACATAGCGAATTTATC+TGG | + | chr8_2:60193972-60193991 | Msa1258870:intron | 30.0% | |
| CCACTAAGAACAAAATCTAA+CGG | - | chr8_2:60194009-60194028 | None:intergenic | 30.0% | |
| ATATATTGCTACCTGATCAA+CGG | - | chr8_2:60194238-60194257 | None:intergenic | 30.0% | |
| AATATCAAGAGACTTAGCTA+GGG | - | chr8_2:60194391-60194410 | None:intergenic | 30.0% | |
| AAATATCAAGAGACTTAGCT+AGG | - | chr8_2:60194392-60194411 | None:intergenic | 30.0% | |
| !!! | CTCTTGATATTTTTAGGGAT+TGG | + | chr8_2:60194400-60194419 | Msa1258870:intron | 30.0% |
| ! | TAATTATTGACTACGATCGA+TGG | - | chr8_2:60194452-60194471 | None:intergenic | 30.0% |
| GAAGGTAGCTAATAATAACT+TGG | - | chr8_2:60194705-60194724 | None:intergenic | 30.0% | |
| ATTATTAGCTACCTTCAACT+TGG | + | chr8_2:60194709-60194728 | Msa1258870:intron | 30.0% | |
| TTATTAGCTACCTTCAACTT+GGG | + | chr8_2:60194710-60194729 | Msa1258870:intron | 30.0% | |
| GAAAACAAACACAGAAACAT+GGG | - | chr8_2:60194837-60194856 | None:intergenic | 30.0% | |
| AGAAAACAAACACAGAAACA+TGG | - | chr8_2:60194838-60194857 | None:intergenic | 30.0% | |
| CAGACAATTTCAATTGAGAA+TGG | + | chr8_2:60194953-60194972 | Msa1258870:intron | 30.0% | |
| ! | CTTCATCTCTTTTTCTCTTA+GGG | - | chr8_2:60195064-60195083 | None:intergenic | 30.0% |
| ! | TCTTCATCTCTTTTTCTCTT+AGG | - | chr8_2:60195065-60195084 | None:intergenic | 30.0% |
| ! | CCCCTTTTCAAAATAAGATA+AGG | - | chr8_2:60195190-60195209 | None:intergenic | 30.0% |
| AAGGTTATTGTTAGTGTTAG+TGG | + | chr8_2:60195226-60195245 | Msa1258870:three_prime_UTR | 30.0% | |
| !!! | TTATGGTTTTGGGTAGGAAA+GGG | - | chr8_2:60191625-60191644 | None:intergenic | 35.0% |
| !!! | TTTATGGTTTTGGGTAGGAA+AGG | - | chr8_2:60191626-60191645 | None:intergenic | 35.0% |
| !!! | TAGAGTTTATGGTTTTGGGT+AGG | - | chr8_2:60191631-60191650 | None:intergenic | 35.0% |
| CATGTGTTGTAGATTGAAAG+AGG | - | chr8_2:60191681-60191700 | None:intergenic | 35.0% | |
| CTCTTTCAATCTACAACACA+TGG | + | chr8_2:60191679-60191698 | Msa1258870:exon | 35.0% | |
| !!! | CTGGTTTTTTTACAGTTGCA+CGG | + | chr8_2:60192112-60192131 | Msa1258870:intron | 35.0% |
| GAGGATGAAATGGACAAATA+CGG | + | chr8_2:60192134-60192153 | Msa1258870:CDS | 35.0% | |
| !! | ATGCATCTTTGTTTGAGTTG+CGG | - | chr8_2:60192197-60192216 | None:intergenic | 35.0% |
| CTCAAACAAAGATGCATCAA+AGG | + | chr8_2:60192200-60192219 | Msa1258870:CDS | 35.0% | |
| CAAAGTTGTTTATGCGTAAC+TGG | + | chr8_2:60192487-60192506 | Msa1258870:intron | 35.0% | |
| TTATGCGTAACTGGTATCTA+TGG | + | chr8_2:60192496-60192515 | Msa1258870:intron | 35.0% | |
| ! | GTGTTTGGAGCATATATGTA+CGG | + | chr8_2:60192660-60192679 | Msa1258870:CDS | 35.0% |
| ! | ATTTTGCAACATGCAAGAAG+AGG | + | chr8_2:60192785-60192804 | Msa1258870:CDS | 35.0% |
| ! | TTTTGCAACATGCAAGAAGA+GGG | + | chr8_2:60192786-60192805 | Msa1258870:CDS | 35.0% |
| TAAACAACTAACCTGCAAAG+AGG | - | chr8_2:60192904-60192923 | None:intergenic | 35.0% | |
| TATGCTAGCTAAGTTGCATT+AGG | - | chr8_2:60192936-60192955 | None:intergenic | 35.0% | |
| !! | TTAAAGGGTGTTAGTAGTTG+CGG | + | chr8_2:60193058-60193077 | Msa1258870:intron | 35.0% |
| AAAAATAGAGCCAATGGTGA+TGG | + | chr8_2:60193135-60193154 | Msa1258870:intron | 35.0% | |
| GTCTAAATAACCATCACCAT+TGG | - | chr8_2:60193148-60193167 | None:intergenic | 35.0% | |
| !! | TGGTGATGGTTATTTAGACA+TGG | + | chr8_2:60193149-60193168 | Msa1258870:intron | 35.0% |
| GATGGTTATTTAGACATGGT+CGG | + | chr8_2:60193153-60193172 | Msa1258870:intron | 35.0% | |
| !!! | GGCGAGTTTTTTTTCTTTCT+TGG | + | chr8_2:60193174-60193193 | Msa1258870:intron | 35.0% |
| AGTTATGTCGATGACTATGA+TGG | + | chr8_2:60193208-60193227 | Msa1258870:intron | 35.0% | |
| CACACTATCATCACCATAAA+AGG | - | chr8_2:60193248-60193267 | None:intergenic | 35.0% | |
| !! | CTTTTATGGTGATGATAGTG+TGG | + | chr8_2:60193246-60193265 | Msa1258870:intron | 35.0% |
| AAAACAGAGCTATTCTTCCA+TGG | + | chr8_2:60193779-60193798 | Msa1258870:intron | 35.0% | |
| GTGTCCAAAGACTATTTACT+TGG | - | chr8_2:60193813-60193832 | None:intergenic | 35.0% | |
| ! | CCGTTAGATTTTGTTCTTAG+TGG | + | chr8_2:60194006-60194025 | Msa1258870:intron | 35.0% |
| TTCTTAGTGGAATACATGTG+TGG | + | chr8_2:60194019-60194038 | Msa1258870:intron | 35.0% | |
| CACATACTTTGGTTGTTACA+CGG | - | chr8_2:60194502-60194521 | None:intergenic | 35.0% | |
| ! | TTGATCTTTTCCACTGATGT+TGG | - | chr8_2:60194540-60194559 | None:intergenic | 35.0% |
| CACTAATTGACAGACATGTT+TGG | - | chr8_2:60194758-60194777 | None:intergenic | 35.0% | |
| ACATGTCTGTCAATTAGTGA+AGG | + | chr8_2:60194759-60194778 | Msa1258870:intron | 35.0% | |
| AAAGGAAAGATGATCCCAAA+TGG | + | chr8_2:60194985-60195004 | Msa1258870:CDS | 35.0% | |
| CTTGCTAGTAGTTTCCATTT+GGG | - | chr8_2:60195002-60195021 | None:intergenic | 35.0% | |
| CTCCTTAGAATCTTATGAGA+GGG | - | chr8_2:60195341-60195360 | None:intergenic | 35.0% | |
| !! | GGGTGGTCTTATTTAAGGAA+GGG | - | chr8_2:60191575-60191594 | None:intergenic | 40.0% |
| !! | TGGATGATTCTGAGATCCAA+GGG | - | chr8_2:60191596-60191615 | None:intergenic | 40.0% |
| !! | ATGGATGATTCTGAGATCCA+AGG | - | chr8_2:60191597-60191616 | None:intergenic | 40.0% |
| !!! | TATGGTTTTGGGTAGGAAAG+GGG | - | chr8_2:60191624-60191643 | None:intergenic | 40.0% |
| CAATTGGAGACAAACTAACC+AGG | - | chr8_2:60191805-60191824 | None:intergenic | 40.0% | |
| TTAACTCGGTATCCGATTCA+AGG | + | chr8_2:60191837-60191856 | Msa1258870:intron | 40.0% | |
| !!! | GTCATTTTTCATTCACAGCG+CGG | - | chr8_2:60192092-60192111 | None:intergenic | 40.0% |
| GCTGTGAATGAAAAATGACC+TGG | + | chr8_2:60192093-60192112 | Msa1258870:intron | 40.0% | |
| CGTGCAACTGTAAAAAAACC+AGG | - | chr8_2:60192114-60192133 | None:intergenic | 40.0% | |
| !!! | GTTTTTTTACAGTTGCACGG+AGG | + | chr8_2:60192115-60192134 | Msa1258870:intron | 40.0% |
| !! | GCATCAAAGGTCTTGTTCAA+CGG | + | chr8_2:60192213-60192232 | Msa1258870:CDS | 40.0% |
| ACGGTTAACATCAGAAAACG+TGG | + | chr8_2:60192232-60192251 | Msa1258870:CDS | 40.0% | |
| GTTAACATCAGAAAACGTGG+TGG | + | chr8_2:60192235-60192254 | Msa1258870:CDS | 40.0% | |
| GTAGCTTCATACAACGGATA+CGG | - | chr8_2:60192301-60192320 | None:intergenic | 40.0% | |
| TGGTGAGTAGCTTCATACAA+CGG | - | chr8_2:60192307-60192326 | None:intergenic | 40.0% | |
| AACGCGGTTCAAAAAACTGA+AGG | + | chr8_2:60192335-60192354 | Msa1258870:CDS | 40.0% | |
| ACGCGGTTCAAAAAACTGAA+GGG | + | chr8_2:60192336-60192355 | Msa1258870:CDS | 40.0% | |
| TTCAAGCACAGGATCATGTT+TGG | - | chr8_2:60192375-60192394 | None:intergenic | 40.0% | |
| AGGATATCAAGTTCAAGCAC+AGG | - | chr8_2:60192386-60192405 | None:intergenic | 40.0% | |
| TATAGAGGAGAGAGAAATCG+AGG | + | chr8_2:60192587-60192606 | Msa1258870:intron | 40.0% | |
| TTGGAGCATATATGTACGGA+AGG | + | chr8_2:60192664-60192683 | Msa1258870:CDS | 40.0% | |
| TGGAGCATATATGTACGGAA+GGG | + | chr8_2:60192665-60192684 | Msa1258870:CDS | 40.0% | |
| TGCAGGAATCATCAGTTTGT+TGG | - | chr8_2:60192876-60192895 | None:intergenic | 40.0% | |
| TAGCTAAGTTGCATTAGGCA+TGG | - | chr8_2:60192931-60192950 | None:intergenic | 40.0% | |
| TGTCGATGAGTGATAAAACG+TGG | + | chr8_2:60193111-60193130 | Msa1258870:intron | 40.0% | |
| GTCGATGAGTGATAAAACGT+GGG | + | chr8_2:60193112-60193131 | Msa1258870:intron | 40.0% | |
| TTCTCTCGCTGAAAATAGCA+TGG | - | chr8_2:60193761-60193780 | None:intergenic | 40.0% | |
| !! | TTTACTTGGTCTTGTGACCA+TGG | - | chr8_2:60193799-60193818 | None:intergenic | 40.0% |
| GTTATAATAACTCTCTCGCG+AGG | + | chr8_2:60194070-60194089 | Msa1258870:intron | 40.0% | |
| ATAAAGTCTCACCGTTGATC+AGG | + | chr8_2:60194224-60194243 | Msa1258870:intron | 40.0% | |
| TTCAAACACGCAATTGTGTG+TGG | + | chr8_2:60194345-60194364 | Msa1258870:intron | 40.0% | |
| AACGGCATCAAAATACAAGC+TGG | - | chr8_2:60194426-60194445 | None:intergenic | 40.0% | |
| !!! | AGCTTGTATTTTGATGCCGT+TGG | + | chr8_2:60194425-60194444 | Msa1258870:intron | 40.0% |
| TTTGGTTGTTACACGGTAGT+GGG | - | chr8_2:60194495-60194514 | None:intergenic | 40.0% | |
| CGTGTAACAACCAAAGTATG+TGG | + | chr8_2:60194500-60194519 | Msa1258870:intron | 40.0% | |
| ATGGACATGACCACATACTT+TGG | - | chr8_2:60194513-60194532 | None:intergenic | 40.0% | |
| ATTGACAGACATGTTTGGCA+TGG | - | chr8_2:60194753-60194772 | None:intergenic | 40.0% | |
| TGAGAATGGAGCAAGAGAAA+AGG | + | chr8_2:60194967-60194986 | Msa1258870:CDS | 40.0% | |
| CCTTGCTAGTAGTTTCCATT+TGG | - | chr8_2:60195003-60195022 | None:intergenic | 40.0% | |
| CCAAATGGAAACTACTAGCA+AGG | + | chr8_2:60195000-60195019 | Msa1258870:CDS | 40.0% | |
| ATGGAAACTACTAGCAAGGA+AGG | + | chr8_2:60195004-60195023 | Msa1258870:CDS | 40.0% | |
| GGAAAACATAACCTTAGCTG+AGG | - | chr8_2:60195033-60195052 | None:intergenic | 40.0% | |
| ! | TTTTCTCTTAGGGAGAGACA+AGG | - | chr8_2:60195054-60195073 | None:intergenic | 40.0% |
| ! | AATCGTGGGATCAGATGTTT+TGG | + | chr8_2:60195104-60195123 | Msa1258870:CDS | 40.0% |
| GGGTTTCAATTGTGTACGTA+AGG | + | chr8_2:60195207-60195226 | Msa1258870:three_prime_UTR | 40.0% | |
| TGTTAGTGGCTCTTCAATTG+AGG | + | chr8_2:60195240-60195259 | Msa1258870:three_prime_UTR | 40.0% | |
| TCTTATGAGAGGGCAAAATG+AGG | - | chr8_2:60195331-60195350 | None:intergenic | 40.0% | |
| TGCCCTCTCATAAGATTCTA+AGG | + | chr8_2:60195336-60195355 | Msa1258870:three_prime_UTR | 40.0% | |
| CCTCCTTAGAATCTTATGAG+AGG | - | chr8_2:60195342-60195361 | None:intergenic | 40.0% | |
| ! | CCTCTCATAAGATTCTAAGG+AGG | + | chr8_2:60195339-60195358 | Msa1258870:three_prime_UTR | 40.0% |
| !! | GGGGTGGTCTTATTTAAGGA+AGG | - | chr8_2:60191576-60191595 | None:intergenic | 45.0% |
| !! | CCAAGGGGTGGTCTTATTTA+AGG | - | chr8_2:60191580-60191599 | None:intergenic | 45.0% |
| CCTTAAATAAGACCACCCCT+TGG | + | chr8_2:60191577-60191596 | Msa1258870:five_prime_UTR | 45.0% | |
| !! | GGATGATTCTGAGATCCAAG+GGG | - | chr8_2:60191595-60191614 | None:intergenic | 45.0% |
| GAATACCCAAACCACACCAA+TGG | + | chr8_2:60191706-60191725 | Msa1258870:CDS | 45.0% | |
| ACTAACCAGGATGCTTGTGT+GGG | - | chr8_2:60191792-60191811 | None:intergenic | 45.0% | |
| AACTAACCAGGATGCTTGTG+TGG | - | chr8_2:60191793-60191812 | None:intergenic | 45.0% | |
| CTACAAACCTGGATGAGTAG+AGG | - | chr8_2:60192027-60192046 | None:intergenic | 45.0% | |
| CAAATACGGAATCCACCTGT+TGG | + | chr8_2:60192148-60192167 | Msa1258870:CDS | 45.0% | |
| ATACAACGGATACGGAGATC+CGG | - | chr8_2:60192293-60192312 | None:intergenic | 45.0% | |
| ACTCACCAATCACTTCAACG+CGG | + | chr8_2:60192319-60192338 | Msa1258870:CDS | 45.0% | |
| TTGAACCGCGTTGAAGTGAT+TGG | - | chr8_2:60192327-60192346 | None:intergenic | 45.0% | |
| CGGTTCAAAAAACTGAAGGG+TGG | + | chr8_2:60192339-60192358 | Msa1258870:CDS | 45.0% | |
| ACTTGATATCCTCCGCTTCA+TGG | + | chr8_2:60192394-60192413 | Msa1258870:CDS | 45.0% | |
| TTTCGCTTTCGTCCATGAAG+CGG | - | chr8_2:60192409-60192428 | None:intergenic | 45.0% | |
| ! | GAAATCGAGGAAGCATAGAG+AGG | + | chr8_2:60192600-60192619 | Msa1258870:CDS | 45.0% |
| GTTGTATGCGGAACTTTCTG+AGG | + | chr8_2:60192630-60192649 | Msa1258870:CDS | 45.0% | |
| AACATGGTATGGTCCAACGT+CGG | - | chr8_2:60192695-60192714 | None:intergenic | 45.0% | |
| !! | CAGGTGGAGAATTTGCTACA+CGG | - | chr8_2:60192739-60192758 | None:intergenic | 45.0% |
| AGCAAATTCTCCACCTGTCA+AGG | + | chr8_2:60192742-60192761 | Msa1258870:CDS | 45.0% | |
| GCAAATTCTCCACCTGTCAA+GGG | + | chr8_2:60192743-60192762 | Msa1258870:CDS | 45.0% | |
| AACATGCAAGAAGAGGGTGA+AGG | + | chr8_2:60192792-60192811 | Msa1258870:CDS | 45.0% | |
| ACATGCAAGAAGAGGGTGAA+GGG | + | chr8_2:60192793-60192812 | Msa1258870:CDS | 45.0% | |
| CGTGGGAAAAATAGAGCCAA+TGG | + | chr8_2:60193129-60193148 | Msa1258870:intron | 45.0% | |
| ! | TATGGTGATGATAGTGTGGG+TGG | + | chr8_2:60193250-60193269 | Msa1258870:intron | 45.0% |
| CTTTGGTTGTTACACGGTAG+TGG | - | chr8_2:60194496-60194515 | None:intergenic | 45.0% | |
| !! | TTCCACTGATGTTGGTGTCA+TGG | - | chr8_2:60194532-60194551 | None:intergenic | 45.0% |
| TACCTTCAACTTGGGAAGCA+TGG | + | chr8_2:60194718-60194737 | Msa1258870:intron | 45.0% | |
| ! | AACCATGCTTCCCAAGTTGA+AGG | - | chr8_2:60194723-60194742 | None:intergenic | 45.0% |
| AGAGTGACCATAGACAATCG+TGG | + | chr8_2:60195089-60195108 | Msa1258870:CDS | 45.0% | |
| GAGTGACCATAGACAATCGT+GGG | + | chr8_2:60195090-60195109 | Msa1258870:CDS | 45.0% | |
| TCTGATCCCACGATTGTCTA+TGG | - | chr8_2:60195099-60195118 | None:intergenic | 45.0% | |
| !! | TGATTCTGAGATCCAAGGGG+TGG | - | chr8_2:60191592-60191611 | None:intergenic | 50.0% |
| TGGGTAGGAAAGGGGAATGA+TGG | - | chr8_2:60191616-60191635 | None:intergenic | 50.0% | |
| TACCCAAACCACACCAATGG+AGG | + | chr8_2:60191709-60191728 | Msa1258870:CDS | 50.0% | |
| GACCTCCATTGGTGTGGTTT+GGG | - | chr8_2:60191714-60191733 | None:intergenic | 50.0% | |
| TAAGACGACCTCCATTGGTG+TGG | - | chr8_2:60191720-60191739 | None:intergenic | 50.0% | |
| CTCGAAAACAGGAGATACCG+AGG | - | chr8_2:60191909-60191928 | None:intergenic | 50.0% | |
| TGGAAGGAACGCCGTGAATT+TGG | - | chr8_2:60191979-60191998 | None:intergenic | 50.0% | |
| GTAGCCGATGAAAGCGGTTA+CGG | - | chr8_2:60192005-60192024 | None:intergenic | 50.0% | |
| GTAGAGGTAGCCGATGAAAG+CGG | - | chr8_2:60192011-60192030 | None:intergenic | 50.0% | |
| CAGTTGCACGGAGGATGAAA+TGG | + | chr8_2:60192124-60192143 | Msa1258870:intron | 50.0% | |
| ACACGTGAGATAGTGCCAAC+AGG | - | chr8_2:60192166-60192185 | None:intergenic | 50.0% | |
| ! | GCACAGGATCATGTTTGGTG+AGG | - | chr8_2:60192370-60192389 | None:intergenic | 50.0% |
| ! | AGGAAGCATAGAGAGGAGCA+AGG | + | chr8_2:60192607-60192626 | Msa1258870:CDS | 50.0% |
| ! | GGAAGCATAGAGAGGAGCAA+GGG | + | chr8_2:60192608-60192627 | Msa1258870:CDS | 50.0% |
| AGAGGAGCAAGGGTTGTATG+CGG | + | chr8_2:60192618-60192637 | Msa1258870:CDS | 50.0% | |
| !! | TTCTGAGGCGATGGAGTGTT+TGG | + | chr8_2:60192645-60192664 | Msa1258870:CDS | 50.0% |
| CGTTGGACCATACCATGTTG+AGG | + | chr8_2:60192696-60192715 | Msa1258870:CDS | 50.0% | |
| CCTGCAAAGAGGAACATTGC+AGG | - | chr8_2:60192893-60192912 | None:intergenic | 50.0% | |
| CCTGCAATGTTCCTCTTTGC+AGG | + | chr8_2:60192890-60192909 | Msa1258870:CDS | 50.0% | |
| ! | ATGATAGTGTGGGTGGTGGT+CGG | + | chr8_2:60193257-60193276 | Msa1258870:intron | 50.0% |
| TGGTCACACCAACACACTCA+CGG | + | chr8_2:60193663-60193682 | Msa1258870:intron | 50.0% | |
| AATGGATGCCGTGAGTGTGT+TGG | - | chr8_2:60193674-60193693 | None:intergenic | 50.0% | |
| ! | CACACTCACGGCATCCATTT+TGG | + | chr8_2:60193675-60193694 | Msa1258870:intron | 50.0% |
| TAACTCTCTCGCGAGGTTGT+CGG | + | chr8_2:60194077-60194096 | Msa1258870:intron | 50.0% | |
| GACTACGATCGATGGACCAA+CGG | - | chr8_2:60194444-60194463 | None:intergenic | 50.0% | |
| GTCCATGACACCAACATCAG+TGG | + | chr8_2:60194527-60194546 | Msa1258870:intron | 50.0% | |
| AAGGAAGGTTGCCTCAGCTA+AGG | + | chr8_2:60195019-60195038 | Msa1258870:CDS | 50.0% | |
| CGACCTCCATTGGTGTGGTT+TGG | - | chr8_2:60191715-60191734 | None:intergenic | 55.0% | |
| TCGGGTAAGACGACCTCCAT+TGG | - | chr8_2:60191725-60191744 | None:intergenic | 55.0% | |
| TCGGAGCTGCGTTGTTTACG+CGG | - | chr8_2:60191947-60191966 | None:intergenic | 55.0% | |
| ACCGCCGTAACCGCTTTCAT+CGG | + | chr8_2:60191998-60192017 | Msa1258870:CDS | 55.0% | |
| TCGGCTACCTCTACTCATCC+AGG | + | chr8_2:60192017-60192036 | Msa1258870:CDS | 55.0% | |
| CGTGAGATAGTGCCAACAGG+TGG | - | chr8_2:60192163-60192182 | None:intergenic | 55.0% | |
| TGGATGTACTCCAACTCGCC+AGG | + | chr8_2:60192255-60192274 | Msa1258870:CDS | 55.0% | |
| !! | TGCGGAACTTTCTGAGGCGA+TGG | + | chr8_2:60192636-60192655 | Msa1258870:CDS | 55.0% |
| AAGCTGAAGCCCTTGACAGG+TGG | - | chr8_2:60192755-60192774 | None:intergenic | 55.0% | |
| CAGAAGCTGAAGCCCTTGAC+AGG | - | chr8_2:60192758-60192777 | None:intergenic | 55.0% | |
| TGCAAGAAGAGGGTGAAGGG+AGG | + | chr8_2:60192796-60192815 | Msa1258870:CDS | 55.0% | |
| ! | GCTGGAGGTGCAAACGTATG+TGG | + | chr8_2:60192821-60192840 | Msa1258870:CDS | 55.0% |
| ! | GGTGATGATAGTGTGGGTGG+TGG | + | chr8_2:60193253-60193272 | Msa1258870:intron | 55.0% |
| AACTCTCTCGCGAGGTTGTC+GGG | + | chr8_2:60194078-60194097 | Msa1258870:intron | 55.0% | |
| TCCAGCCCACACAAGCATCC+TGG | + | chr8_2:60191784-60191803 | Msa1258870:CDS | 60.0% | |
| ACCAGGATGCTTGTGTGGGC+TGG | - | chr8_2:60191788-60191807 | None:intergenic | 60.0% | |
| AAAGCGGTTACGGCGGTGGA+AGG | - | chr8_2:60191995-60192014 | None:intergenic | 60.0% | |
| GATGAAAGCGGTTACGGCGG+TGG | - | chr8_2:60191999-60192018 | None:intergenic | 60.0% | |
| GCCGATGAAAGCGGTTACGG+CGG | - | chr8_2:60192002-60192021 | None:intergenic | 60.0% | |
| CGCTTTCGTCCATGAAGCGG+AGG | - | chr8_2:60192406-60192425 | None:intergenic | 60.0% | |
| CATCGCAGAGCCTGGCGAGT+TGG | - | chr8_2:60192268-60192287 | None:intergenic | 65.0% | |
| ATCCGGTGCATCGCAGAGCC+TGG | - | chr8_2:60192276-60192295 | None:intergenic | 65.0% | |
| ! | ACGGAAGGGTGCACCGACGT+TGG | + | chr8_2:60192679-60192698 | Msa1258870:CDS | 65.0% |
| AGAGGGTGAAGGGAGGCTGC+TGG | + | chr8_2:60192803-60192822 | Msa1258870:CDS | 65.0% | |
| CGCCAGGCTCTGCGATGCAC+CGG | + | chr8_2:60192271-60192290 | Msa1258870:CDS | 70.0% | |
| GGGTGAAGGGAGGCTGCTGG+AGG | + | chr8_2:60192806-60192825 | Msa1258870:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 60191554 | 60195460 | 60191554 | ID=Msa1258870;Name=Msa1258870 |
| chr8_2 | mRNA | 60191554 | 60195460 | 60191554 | ID=Msa1258870-mRNA-1;Parent=Msa1258870;Name=Msa1258870-mRNA-1;_AED=0.07;_eAED=0.07;_QI=144|1|1|1|1|1|5|279|363 |
| chr8_2 | exon | 60191554 | 60191805 | 60191554 | ID=Msa1258870-mRNA-1:exon:18885;Parent=Msa1258870-mRNA-1 |
| chr8_2 | exon | 60191905 | 60192038 | 60191905 | ID=Msa1258870-mRNA-1:exon:18886;Parent=Msa1258870-mRNA-1 |
| chr8_2 | exon | 60192127 | 60192430 | 60192127 | ID=Msa1258870-mRNA-1:exon:18887;Parent=Msa1258870-mRNA-1 |
| chr8_2 | exon | 60192592 | 60192911 | 60192592 | ID=Msa1258870-mRNA-1:exon:18888;Parent=Msa1258870-mRNA-1 |
| chr8_2 | exon | 60194956 | 60195460 | 60194956 | ID=Msa1258870-mRNA-1:exon:18889;Parent=Msa1258870-mRNA-1 |
| chr8_2 | five_prime_UTR | 60191554 | 60191697 | 60191554 | ID=Msa1258870-mRNA-1:five_prime_utr;Parent=Msa1258870-mRNA-1 |
| chr8_2 | CDS | 60191698 | 60191805 | 60191698 | ID=Msa1258870-mRNA-1:cds;Parent=Msa1258870-mRNA-1 |
| chr8_2 | CDS | 60191905 | 60192038 | 60191905 | ID=Msa1258870-mRNA-1:cds;Parent=Msa1258870-mRNA-1 |
| chr8_2 | CDS | 60192127 | 60192430 | 60192127 | ID=Msa1258870-mRNA-1:cds;Parent=Msa1258870-mRNA-1 |
| chr8_2 | CDS | 60192592 | 60192911 | 60192592 | ID=Msa1258870-mRNA-1:cds;Parent=Msa1258870-mRNA-1 |
| chr8_2 | CDS | 60194956 | 60195181 | 60194956 | ID=Msa1258870-mRNA-1:cds;Parent=Msa1258870-mRNA-1 |
| chr8_2 | three_prime_UTR | 60195182 | 60195460 | 60195182 | ID=Msa1258870-mRNA-1:three_prime_utr;Parent=Msa1258870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
