Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330150 | XP_003608891.1 | 97.796 | 363 | 7 | 1 | 1 | 363 | 1 | 362 | 0.0 | 744 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330150 | sp|Q94BN0|BT2_ARATH | 61.515 | 330 | 114 | 6 | 15 | 332 | 32 | 360 | 2.00e-132 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330150 | G7JMM8 | 97.796 | 363 | 7 | 1 | 1 | 363 | 1 | 362 | 0.0 | 744 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1330150 | TR | TAZ |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1258870 | Msa1330150 | 0.929768 | 4.325698e-93 | -8.615850e-47 |
| Msa1330140 | Msa1330150 | 0.995348 | 2.242284e-215 | -8.615850e-47 |
| Msa1330150 | Msa1330200 | 0.991618 | 1.289351e-188 | -8.615850e-47 |
| Msa1330150 | Msa1369800 | 0.995394 | 7.810570e-216 | -8.615850e-47 |
| Msa1208560 | Msa1330150 | 0.984525 | 8.166343e-161 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330150 | MtrunA17_Chr4g0058071 | 97.796 | 363 | 7 | 1 | 1 | 363 | 1 | 362 | 0.0 | 744 |
| Msa1330150 | MtrunA17_Chr3g0116501 | 58.621 | 203 | 81 | 2 | 87 | 289 | 1 | 200 | 1.57e-86 | 260 |
| Msa1330150 | MtrunA17_Chr5g0401281 | 45.973 | 298 | 154 | 7 | 18 | 313 | 68 | 360 | 1.56e-84 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330150 | AT3G48360.1 | 61.515 | 330 | 114 | 6 | 15 | 332 | 32 | 360 | 2.03e-133 | 385 |
| Msa1330150 | AT5G63160.1 | 62.540 | 315 | 108 | 5 | 14 | 319 | 22 | 335 | 2.64e-130 | 377 |
| Msa1330150 | AT3G48360.2 | 63.636 | 286 | 92 | 5 | 15 | 289 | 32 | 316 | 3.39e-120 | 351 |
| Msa1330150 | AT5G63160.2 | 63.732 | 284 | 94 | 4 | 14 | 289 | 22 | 304 | 3.16e-119 | 347 |
| Msa1330150 | AT5G63160.3 | 64.634 | 246 | 79 | 4 | 81 | 319 | 6 | 250 | 8.10e-104 | 307 |
| Msa1330150 | AT3G48360.3 | 62.745 | 255 | 85 | 4 | 87 | 332 | 1 | 254 | 1.59e-103 | 305 |
| Msa1330150 | AT5G67480.1 | 45.364 | 302 | 159 | 6 | 18 | 317 | 61 | 358 | 7.24e-83 | 257 |
| Msa1330150 | AT5G67480.3 | 45.364 | 302 | 159 | 6 | 18 | 317 | 61 | 358 | 7.24e-83 | 257 |
| Msa1330150 | AT5G67480.2 | 45.364 | 302 | 159 | 6 | 18 | 317 | 72 | 369 | 9.61e-83 | 257 |
| Msa1330150 | AT4G37610.1 | 42.904 | 303 | 164 | 8 | 18 | 317 | 56 | 352 | 6.86e-76 | 239 |
| Msa1330150 | AT1G05690.1 | 41.528 | 301 | 170 | 5 | 18 | 317 | 55 | 350 | 1.82e-74 | 235 |
| Msa1330150 | AT1G55760.1 | 33.835 | 133 | 79 | 4 | 18 | 147 | 165 | 291 | 6.35e-13 | 69.3 |
| Msa1330150 | AT3G56230.1 | 24.845 | 161 | 120 | 1 | 25 | 184 | 120 | 280 | 2.11e-12 | 67.4 |
Find 116 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGGGGTGGTCTTATTTA+AGG | 0.172362 | 8_4:-49288580 | None:intergenic |
| TGGAAGGAACGCCGTGAATT+TGG | 0.203367 | 8_4:-49288977 | None:intergenic |
| CTTGCAATGTTCCTCTTTGC+AGG | 0.245278 | 8_4:+49289890 | Msa1330150:CDS |
| TGCCCTCTCATAAGATTCTA+AGG | 0.266164 | 8_4:+49291941 | Msa1330150:three_prime_UTR |
| CCTTGCTAGTAGTTTCCATT+TGG | 0.271352 | 8_4:-49291605 | None:intergenic |
| GTGAATTTGGATTATTCTTT+CGG | 0.293435 | 8_4:-49288964 | None:intergenic |
| GTGAATAAAGACATCATATT+CGG | 0.296060 | 8_4:-49288743 | None:intergenic |
| TTTGCTTGAAATGTAAATTT+TGG | 0.310791 | 8_4:+49291885 | Msa1330150:three_prime_UTR |
| TTATAAATTTAGTGATTATT+CGG | 0.311689 | 8_4:+49292040 | Msa1330150:three_prime_UTR |
| TTCTGAGGCGATGGAGTGTT+TGG | 0.329039 | 8_4:+49289645 | Msa1330150:CDS |
| ACTTGATATCCTCCGCTTCA+TGG | 0.330110 | 8_4:+49289394 | Msa1330150:CDS |
| GACCTCCATTGGTGTGGTTT+GGG | 0.335478 | 8_4:-49288713 | None:intergenic |
| AAGGTTATTGTTAGTGTTAG+TGG | 0.335935 | 8_4:+49291831 | Msa1330150:three_prime_UTR |
| CTTGCTAGTAGTTTCCATTT+GGG | 0.348881 | 8_4:-49291604 | None:intergenic |
| AATCGTGGGATCAGATGTTT+TGG | 0.358065 | 8_4:+49291709 | Msa1330150:CDS |
| ATTTAAGGAAGGGAAGATAT+TGG | 0.363883 | 8_4:-49288565 | None:intergenic |
| CGACCTCCATTGGTGTGGTT+TGG | 0.364602 | 8_4:-49288714 | None:intergenic |
| TGCAAGAATCATCAGTTTGT+TGG | 0.365276 | 8_4:-49289873 | None:intergenic |
| TCTGATCCCACGATTGTCTA+TGG | 0.399851 | 8_4:-49291701 | None:intergenic |
| TCAATAATGTTCTCGAAAAC+AGG | 0.405232 | 8_4:-49288918 | None:intergenic |
| CAGTTGCACGGAGGATGAAA+TGG | 0.408781 | 8_4:+49289124 | Msa1330150:intron |
| AGAGGGTGAAGGGAGGCTGC+TGG | 0.412837 | 8_4:+49289803 | Msa1330150:CDS |
| AGGAGAATTATTGTGATGTT+TGG | 0.418373 | 8_4:-49288660 | None:intergenic |
| ACCAGGATGCTTGTGTGGGC+TGG | 0.439380 | 8_4:-49288787 | None:intergenic |
| TTCAAGCACAGGATCATGTT+TGG | 0.441776 | 8_4:-49289372 | None:intergenic |
| CGCCAGGCTCTGCGATGCAC+CGG | 0.448288 | 8_4:+49289271 | Msa1330150:CDS |
| CAGACAATTTCAATTGAGAA+TGG | 0.449145 | 8_4:+49291558 | Msa1330150:intron |
| CATGTGTTGTAGATTGAAAG+AGG | 0.450361 | 8_4:-49288680 | None:intergenic |
| TGAATAAAGACATCATATTC+GGG | 0.450560 | 8_4:-49288742 | None:intergenic |
| TTATTAACCTCAACATGGTA+TGG | 0.459852 | 8_4:-49289703 | None:intergenic |
| TTGAACCGCGTTGAAGTGAT+TGG | 0.469408 | 8_4:-49289324 | None:intergenic |
| TGAGAATGGAGCAAGAGAAA+AGG | 0.470643 | 8_4:+49291572 | Msa1330150:CDS |
| GATGAAAGCGGTTACGGCGG+TGG | 0.476910 | 8_4:-49288997 | None:intergenic |
| GTAGCCGATGAAAGCGGTTA+CGG | 0.477754 | 8_4:-49289003 | None:intergenic |
| GTCTTTATTCACACTTCTGA+TGG | 0.479577 | 8_4:+49288754 | Msa1330150:CDS |
| AGCAAATTCTCCACCTGTCA+AGG | 0.481574 | 8_4:+49289742 | Msa1330150:CDS |
| TGTTAGTGGCTCTTCAATTG+AGG | 0.489370 | 8_4:+49291845 | Msa1330150:three_prime_UTR |
| AAAGGAAAGATGATCCCAAA+TGG | 0.490170 | 8_4:+49291590 | Msa1330150:CDS |
| CAGAAGCTGAAGCCCTTGAC+AGG | 0.502805 | 8_4:-49289755 | None:intergenic |
| AACTAACCAGGATGCTTGTG+TGG | 0.507204 | 8_4:-49288792 | None:intergenic |
| CTCTTTCAATCTACAACACA+TGG | 0.509417 | 8_4:+49288681 | Msa1330150:exon |
| CATCGCAGAGCCTGGCGAGT+TGG | 0.510849 | 8_4:-49289265 | None:intergenic |
| GGGTTTCAATTGTGTACGTA+AGG | 0.511616 | 8_4:+49291812 | Msa1330150:three_prime_UTR |
| TGCGGAACTTTCTGAGGCGA+TGG | 0.528118 | 8_4:+49289636 | Msa1330150:CDS |
| TCGGCTACCTCTACTCATCC+AGG | 0.528548 | 8_4:+49289018 | Msa1330150:CDS |
| TATAGAGGAGAGAGAAATCG+AGG | 0.529791 | 8_4:+49289587 | Msa1330150:intron |
| GAAAGAATAATCCAAATTCA+CGG | 0.535992 | 8_4:+49288966 | Msa1330150:CDS |
| TCCAGCCCACACAAGCATCC+TGG | 0.542058 | 8_4:+49288786 | Msa1330150:CDS |
| CTCAAACAAAGATGCATCAA+AGG | 0.544591 | 8_4:+49289200 | Msa1330150:CDS |
| CCTTAAATAAGACCACCCCT+TGG | 0.544636 | 8_4:+49288580 | Msa1330150:five_prime_UTR |
| TCGGGTAAGACGACCTCCAT+TGG | 0.548298 | 8_4:-49288724 | None:intergenic |
| GTGTTTGGAGCATATATGTA+CGG | 0.548333 | 8_4:+49289660 | Msa1330150:CDS |
| GAGGATGAAATGGACAAATA+CGG | 0.550313 | 8_4:+49289134 | Msa1330150:CDS |
| ACCGCCGTAACCGCTTTCAT+CGG | 0.550954 | 8_4:+49288999 | Msa1330150:CDS |
| ACACGTGAGATAGTGCCAAC+AGG | 0.553618 | 8_4:-49289163 | None:intergenic |
| ACATGCAAGAAGAGGGTGAA+GGG | 0.559984 | 8_4:+49289793 | Msa1330150:CDS |
| ATGGAAACTACTAGCAAGGA+AGG | 0.562140 | 8_4:+49291609 | Msa1330150:CDS |
| TGGATGTACTCCAACTCGCC+AGG | 0.562979 | 8_4:+49289255 | Msa1330150:CDS |
| CGCTTTCGTCCATGAAGCGG+AGG | 0.563948 | 8_4:-49289403 | None:intergenic |
| ATGCATCTTTGTTTGAGTTG+CGG | 0.567744 | 8_4:-49289194 | None:intergenic |
| GGGTGAAGGGAGGCTGCTGG+AGG | 0.568462 | 8_4:+49289806 | Msa1330150:CDS |
| TTTCGCTTTCGTCCATGAAG+CGG | 0.570395 | 8_4:-49289406 | None:intergenic |
| AAAGCGGTTACGGCGGTGGA+AGG | 0.571422 | 8_4:-49288993 | None:intergenic |
| GATGATGATTCTGAGATCCA+AGG | 0.572696 | 8_4:-49288597 | None:intergenic |
| GCATCAAAGGTCTTGTTCAA+CGG | 0.574251 | 8_4:+49289213 | Msa1330150:CDS |
| CAAATACGGAATCCACCTGT+TGG | 0.576636 | 8_4:+49289148 | Msa1330150:CDS |
| GGGGTGGTCTTATTTAAGGA+AGG | 0.576906 | 8_4:-49288576 | None:intergenic |
| AAGGAAGGTTGCCTCAGCTA+AGG | 0.578016 | 8_4:+49291624 | Msa1330150:CDS |
| CCAAATGGAAACTACTAGCA+AGG | 0.585999 | 8_4:+49291605 | Msa1330150:CDS |
| CTCCTTAGAATCTTATGAGA+GGG | 0.589078 | 8_4:-49291943 | None:intergenic |
| TTGGAGCATATATGTACGGA+AGG | 0.591498 | 8_4:+49289664 | Msa1330150:CDS |
| AGGATATCAAGTTCAAGCAC+AGG | 0.591612 | 8_4:-49289383 | None:intergenic |
| GGAAGCATAGAGAGGAGCAA+GGG | 0.591806 | 8_4:+49289608 | Msa1330150:CDS |
| ATACAACGGATACGGAGATC+CGG | 0.598941 | 8_4:-49289290 | None:intergenic |
| GGGTGGTCTTATTTAAGGAA+GGG | 0.601245 | 8_4:-49288575 | None:intergenic |
| GCAAATTCTCCACCTGTCAA+GGG | 0.602836 | 8_4:+49289743 | Msa1330150:CDS |
| GTTGTATGCGGAACTTTCTG+AGG | 0.605270 | 8_4:+49289630 | Msa1330150:CDS |
| GTAGCTTCATACAACGGATA+CGG | 0.605346 | 8_4:-49289298 | None:intergenic |
| GAATACCCAAACCACACCAA+TGG | 0.607266 | 8_4:+49288708 | Msa1330150:CDS |
| TCGGAGCTGCGTTGTTTACG+CGG | 0.613669 | 8_4:-49288945 | None:intergenic |
| AAGCTGAAGCCCTTGACAGG+TGG | 0.613763 | 8_4:-49289752 | None:intergenic |
| AGGAAGCATAGAGAGGAGCA+AGG | 0.616562 | 8_4:+49289607 | Msa1330150:CDS |
| TAAACAACTAACCTGCAAAG+AGG | 0.620623 | 8_4:-49289901 | None:intergenic |
| ATGATGATTCTGAGATCCAA+GGG | 0.622801 | 8_4:-49288596 | None:intergenic |
| CCTCCTTAGAATCTTATGAG+AGG | 0.623054 | 8_4:-49291944 | None:intergenic |
| CAGGTGGAGAATTTGCTACA+CGG | 0.624063 | 8_4:-49289736 | None:intergenic |
| CGTTGGACCATACCATGTTG+AGG | 0.625619 | 8_4:+49289696 | Msa1330150:CDS |
| TACCCAAACCACACCAATGG+AGG | 0.626720 | 8_4:+49288711 | Msa1330150:CDS |
| TAAGACGACCTCCATTGGTG+TGG | 0.627752 | 8_4:-49288719 | None:intergenic |
| TCTTATGAGAGGGCAAAATG+AGG | 0.633014 | 8_4:-49291933 | None:intergenic |
| CTACAAACCTGGATGAGTAG+AGG | 0.636623 | 8_4:-49289025 | None:intergenic |
| ATATTGTAACAATAATGTCT+CGG | 0.638704 | 8_4:+49291741 | Msa1330150:CDS |
| GCTGGAGGTGCAAACGTATG+TGG | 0.643612 | 8_4:+49289821 | Msa1330150:CDS |
| TTTCTTTATTAACCTCAACA+TGG | 0.646312 | 8_4:-49289708 | None:intergenic |
| GAAATCGAGGAAGCATAGAG+AGG | 0.652687 | 8_4:+49289600 | Msa1330150:CDS |
| GCACAGGATCATGTTTGGTG+AGG | 0.659496 | 8_4:-49289367 | None:intergenic |
| GAGTGACCATAGACAATCGT+GGG | 0.660262 | 8_4:+49291695 | Msa1330150:CDS |
| GCCGATGAAAGCGGTTACGG+CGG | 0.661788 | 8_4:-49289000 | None:intergenic |
| TGCAAGAAGAGGGTGAAGGG+AGG | 0.663791 | 8_4:+49289796 | Msa1330150:CDS |
| CGTGAGATAGTGCCAACAGG+TGG | 0.667055 | 8_4:-49289160 | None:intergenic |
| GGAAAACATAACCTTAGCTG+AGG | 0.673989 | 8_4:-49291635 | None:intergenic |
| GTAGAGGTAGCCGATGAAAG+CGG | 0.674697 | 8_4:-49289009 | None:intergenic |
| AACATGCAAGAAGAGGGTGA+AGG | 0.677915 | 8_4:+49289792 | Msa1330150:CDS |
| TGGAGCATATATGTACGGAA+GGG | 0.681205 | 8_4:+49289665 | Msa1330150:CDS |
| CCTCTCATAAGATTCTAAGG+AGG | 0.681421 | 8_4:+49291944 | Msa1330150:three_prime_UTR |
| AGAGGAGCAAGGGTTGTATG+CGG | 0.686478 | 8_4:+49289618 | Msa1330150:CDS |
| TGGTGAGTAGCTTCATACAA+CGG | 0.689964 | 8_4:-49289304 | None:intergenic |
| TGATTCTGAGATCCAAGGGG+TGG | 0.690981 | 8_4:-49288592 | None:intergenic |
| ACTAACCAGGATGCTTGTGT+GGG | 0.692654 | 8_4:-49288791 | None:intergenic |
| CTCGAAAACAGGAGATACCG+AGG | 0.700797 | 8_4:-49288907 | None:intergenic |
| AGAGTGACCATAGACAATCG+TGG | 0.708473 | 8_4:+49291694 | Msa1330150:CDS |
| ACGGTTAACATCAGAAAACG+TGG | 0.721632 | 8_4:+49289232 | Msa1330150:CDS |
| AACATGGTATGGTCCAACGT+CGG | 0.721753 | 8_4:-49289692 | None:intergenic |
| GTTAACATCAGAAAACGTGG+TGG | 0.747454 | 8_4:+49289235 | Msa1330150:CDS |
| TGATGATTCTGAGATCCAAG+GGG | 0.809821 | 8_4:-49288595 | None:intergenic |
| ACTCACCAATCACTTCAACG+CGG | 0.835800 | 8_4:+49289319 | Msa1330150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACAATATACAATAAATTAA+CGG | - | chr8_4:49290902-49290921 | None:intergenic | 10.0% |
| !! | TATATTGTATATTTGTATAT+GGG | + | chr8_4:49290913-49290932 | Msa1330150:intron | 10.0% |
| !!! | AGATATTTATTAATTTTGAT+GGG | - | chr8_4:49291391-49291410 | None:intergenic | 10.0% |
| !!! | TAGATATTTATTAATTTTGA+TGG | - | chr8_4:49291392-49291411 | None:intergenic | 10.0% |
| !!! | AAATAATTAAGCTATTTTTT+TGG | + | chr8_4:49291528-49291547 | Msa1330150:intron | 10.0% |
| !! | TTATAAATTTAGTGATTATT+CGG | + | chr8_4:49292040-49292059 | Msa1330150:three_prime_UTR | 10.0% |
| !! | ATAATCATGGAATTAATTAA+AGG | + | chr8_4:49290042-49290061 | Msa1330150:intron | 15.0% |
| !! | TAATCATGGAATTAATTAAA+GGG | + | chr8_4:49290043-49290062 | Msa1330150:intron | 15.0% |
| !!! | ACTTATTTTATATTTGAGAT+TGG | + | chr8_4:49290402-49290421 | Msa1330150:intron | 15.0% |
| !!! | AATTTCATTTTTGTTTAGAT+GGG | + | chr8_4:49290633-49290652 | Msa1330150:intron | 15.0% |
| !! | GTATATTGTATATTTGTATA+TGG | + | chr8_4:49290912-49290931 | Msa1330150:intron | 15.0% |
| !! | ATATTGTATATTTGTATATG+GGG | + | chr8_4:49290914-49290933 | Msa1330150:intron | 15.0% |
| !!! | TTTTTAGAGTTTATGGTTTT+GGG | - | chr8_4:49288637-49288656 | None:intergenic | 20.0% |
| !!! | TTTTTTAGAGTTTATGGTTT+TGG | - | chr8_4:49288638-49288657 | None:intergenic | 20.0% |
| !! | GTTAAAAAAATACGAACAAT+TGG | - | chr8_4:49288823-49288842 | None:intergenic | 20.0% |
| !!! | TTGTTCGTATTTTTTTAACT+CGG | + | chr8_4:49288824-49288843 | Msa1330150:intron | 20.0% |
| !! | GTTGTAAATCAATAATTAAC+AGG | + | chr8_4:49288884-49288903 | Msa1330150:intron | 20.0% |
| !! | TGATTATTATTGTGTTATAG+AGG | + | chr8_4:49289572-49289591 | Msa1330150:intron | 20.0% |
| !!! | TATTTTATATTTGAGATTGG+AGG | + | chr8_4:49290405-49290424 | Msa1330150:intron | 20.0% |
| !!! | CAATTTCATTTTTGTTTAGA+TGG | + | chr8_4:49290632-49290651 | Msa1330150:intron | 20.0% |
| !!! | TAAGTCTCTTGATATTTTTA+GGG | + | chr8_4:49291007-49291026 | Msa1330150:intron | 20.0% |
| !!! | CTAATTTTATAGAGATGAAT+CGG | + | chr8_4:49291237-49291256 | Msa1330150:intron | 20.0% |
| !! | ATATTGTAACAATAATGTCT+CGG | + | chr8_4:49291741-49291760 | Msa1330150:CDS | 20.0% |
| !!! | TTTGCTTGAAATGTAAATTT+TGG | + | chr8_4:49291885-49291904 | Msa1330150:three_prime_UTR | 20.0% |
| !!! | TTGGTGTTTTTTAGAGTTTA+TGG | - | chr8_4:49288644-49288663 | None:intergenic | 25.0% |
| ! | TGAATAAAGACATCATATTC+GGG | - | chr8_4:49288745-49288764 | None:intergenic | 25.0% |
| ! | GTGAATAAAGACATCATATT+CGG | - | chr8_4:49288746-49288765 | None:intergenic | 25.0% |
| ! | GTGAATTTGGATTATTCTTT+CGG | - | chr8_4:49288967-49288986 | None:intergenic | 25.0% |
| ! | GAAAGAATAATCCAAATTCA+CGG | + | chr8_4:49288966-49288985 | Msa1330150:CDS | 25.0% |
| ! | TTTCTTTATTAACCTCAACA+TGG | - | chr8_4:49289711-49289730 | None:intergenic | 25.0% |
| !! | AGCTCTAACAAAAGATTATA+AGG | - | chr8_4:49289985-49290004 | None:intergenic | 25.0% |
| ! | AGAATAGTACATCATAATCA+TGG | + | chr8_4:49290029-49290048 | Msa1330150:intron | 25.0% |
| !!! | GTTGTTGCGATTTTTTATTT+CGG | + | chr8_4:49290306-49290325 | Msa1330150:intron | 25.0% |
| ! | TTATTTCGGTCATAAATGTA+AGG | + | chr8_4:49290320-49290339 | Msa1330150:intron | 25.0% |
| ! | AAAGCTGATGTATTTGATTA+AGG | + | chr8_4:49290357-49290376 | Msa1330150:intron | 25.0% |
| !!! | TTTTGTTTAGATGGGTAAAA+TGG | + | chr8_4:49290641-49290660 | Msa1330150:intron | 25.0% |
| !!! | AGAAACTATTTTGACCAAAA+TGG | - | chr8_4:49290690-49290709 | None:intergenic | 25.0% |
| ! | TGAACATTGCAATATTTGAT+TGG | - | chr8_4:49290941-49290960 | None:intergenic | 25.0% |
| !! | CTAAGTCTCTTGATATTTTT+AGG | + | chr8_4:49291006-49291025 | Msa1330150:intron | 25.0% |
| ! | AAGGTAGCTAATAATAACTT+GGG | - | chr8_4:49291309-49291328 | None:intergenic | 25.0% |
| !!! | TGCCTTATCTTATTTTGAAA+AGG | + | chr8_4:49291790-49291809 | Msa1330150:three_prime_UTR | 25.0% |
| !!! | GCCTTATCTTATTTTGAAAA+GGG | + | chr8_4:49291791-49291810 | Msa1330150:three_prime_UTR | 25.0% |
| !!! | CCTTATCTTATTTTGAAAAG+GGG | + | chr8_4:49291792-49291811 | Msa1330150:three_prime_UTR | 25.0% |
| ATTTAAGGAAGGGAAGATAT+TGG | - | chr8_4:49288568-49288587 | None:intergenic | 30.0% | |
| AGGAGAATTATTGTGATGTT+TGG | - | chr8_4:49288663-49288682 | None:intergenic | 30.0% | |
| ATAATCGTTAGTCCTTGAAT+CGG | - | chr8_4:49288853-49288872 | None:intergenic | 30.0% | |
| AATCAATAATTAACAGGCCT+CGG | + | chr8_4:49288890-49288909 | Msa1330150:intron | 30.0% | |
| TCAATAATGTTCTCGAAAAC+AGG | - | chr8_4:49288921-49288940 | None:intergenic | 30.0% | |
| ATATACAAGTACTACAAACC+TGG | - | chr8_4:49289039-49289058 | None:intergenic | 30.0% | |
| TTATTAACCTCAACATGGTA+TGG | - | chr8_4:49289706-49289725 | None:intergenic | 30.0% | |
| AATCGCAACAACATTTGTAT+GGG | - | chr8_4:49290298-49290317 | None:intergenic | 30.0% | |
| AAATCGCAACAACATTTGTA+TGG | - | chr8_4:49290299-49290318 | None:intergenic | 30.0% | |
| GATCGATTGTTACTCTTAAA+CGG | + | chr8_4:49290441-49290460 | Msa1330150:intron | 30.0% | |
| ATATATTGCTACCTGATCAA+CGG | - | chr8_4:49290850-49290869 | None:intergenic | 30.0% | |
| AATATCAAGAGACTTAGCTA+GGG | - | chr8_4:49291003-49291022 | None:intergenic | 30.0% | |
| AAATATCAAGAGACTTAGCT+AGG | - | chr8_4:49291004-49291023 | None:intergenic | 30.0% | |
| !!! | CTCTTGATATTTTTAGGGAT+TGG | + | chr8_4:49291012-49291031 | Msa1330150:intron | 30.0% |
| ! | TAATTATTGACTACGATCGA+TGG | - | chr8_4:49291064-49291083 | None:intergenic | 30.0% |
| GAAGGTAGCTAATAATAACT+TGG | - | chr8_4:49291310-49291329 | None:intergenic | 30.0% | |
| ATTATTAGCTACCTTCAACT+TGG | + | chr8_4:49291314-49291333 | Msa1330150:intron | 30.0% | |
| TTATTAGCTACCTTCAACTT+GGG | + | chr8_4:49291315-49291334 | Msa1330150:intron | 30.0% | |
| GAAAACAAACACAGAAACAT+GGG | - | chr8_4:49291442-49291461 | None:intergenic | 30.0% | |
| AGAAAACAAACACAGAAACA+TGG | - | chr8_4:49291443-49291462 | None:intergenic | 30.0% | |
| CAGACAATTTCAATTGAGAA+TGG | + | chr8_4:49291558-49291577 | Msa1330150:intron | 30.0% | |
| ! | CTTCATCTCTTTTTCTCTTA+GGG | - | chr8_4:49291669-49291688 | None:intergenic | 30.0% |
| ! | TCTTCATCTCTTTTTCTCTT+AGG | - | chr8_4:49291670-49291689 | None:intergenic | 30.0% |
| ! | CCCCTTTTCAAAATAAGATA+AGG | - | chr8_4:49291795-49291814 | None:intergenic | 30.0% |
| AAGGTTATTGTTAGTGTTAG+TGG | + | chr8_4:49291831-49291850 | Msa1330150:three_prime_UTR | 30.0% | |
| !! | ATGATGATTCTGAGATCCAA+GGG | - | chr8_4:49288599-49288618 | None:intergenic | 35.0% |
| !!! | TATGGTTTTGGGTAGGAAAT+GGG | - | chr8_4:49288626-49288645 | None:intergenic | 35.0% |
| !!! | TTATGGTTTTGGGTAGGAAA+TGG | - | chr8_4:49288627-49288646 | None:intergenic | 35.0% |
| !!! | TAGAGTTTATGGTTTTGGGT+AGG | - | chr8_4:49288633-49288652 | None:intergenic | 35.0% |
| CATGTGTTGTAGATTGAAAG+AGG | - | chr8_4:49288683-49288702 | None:intergenic | 35.0% | |
| CTCTTTCAATCTACAACACA+TGG | + | chr8_4:49288681-49288700 | Msa1330150:exon | 35.0% | |
| GTCTTTATTCACACTTCTGA+TGG | + | chr8_4:49288754-49288773 | Msa1330150:CDS | 35.0% | |
| GAGGATGAAATGGACAAATA+CGG | + | chr8_4:49289134-49289153 | Msa1330150:CDS | 35.0% | |
| !! | ATGCATCTTTGTTTGAGTTG+CGG | - | chr8_4:49289197-49289216 | None:intergenic | 35.0% |
| CTCAAACAAAGATGCATCAA+AGG | + | chr8_4:49289200-49289219 | Msa1330150:CDS | 35.0% | |
| CAAAGTTGTTTATGCGTAAC+TGG | + | chr8_4:49289487-49289506 | Msa1330150:intron | 35.0% | |
| TTATGCGTAACTGGTATCTA+TGG | + | chr8_4:49289496-49289515 | Msa1330150:intron | 35.0% | |
| ! | GTGTTTGGAGCATATATGTA+CGG | + | chr8_4:49289660-49289679 | Msa1330150:CDS | 35.0% |
| ! | ATTTTGCAACATGCAAGAAG+AGG | + | chr8_4:49289785-49289804 | Msa1330150:CDS | 35.0% |
| ! | TTTTGCAACATGCAAGAAGA+GGG | + | chr8_4:49289786-49289805 | Msa1330150:CDS | 35.0% |
| TGCAAGAATCATCAGTTTGT+TGG | - | chr8_4:49289876-49289895 | None:intergenic | 35.0% | |
| TAAACAACTAACCTGCAAAG+AGG | - | chr8_4:49289904-49289923 | None:intergenic | 35.0% | |
| TATGCTAGCTAAGTTGCATT+AGG | - | chr8_4:49289936-49289955 | None:intergenic | 35.0% | |
| !! | TTAAAGGGTGTTAGTAGTTG+CGG | + | chr8_4:49290058-49290077 | Msa1330150:intron | 35.0% |
| AAAAATAGAGCCAATGGTGA+TGG | + | chr8_4:49290135-49290154 | Msa1330150:intron | 35.0% | |
| GTCTAAATAACCATCACCAT+TGG | - | chr8_4:49290148-49290167 | None:intergenic | 35.0% | |
| !! | TGGTGATGGTTATTTAGACA+TGG | + | chr8_4:49290149-49290168 | Msa1330150:intron | 35.0% |
| GATGGTTATTTAGACATGGT+CGG | + | chr8_4:49290153-49290172 | Msa1330150:intron | 35.0% | |
| !!! | GGCGAGTTTTTTTTCTTTCT+TGG | + | chr8_4:49290174-49290193 | Msa1330150:intron | 35.0% |
| AGTTATGTCGATGACTATGA+TGG | + | chr8_4:49290208-49290227 | Msa1330150:intron | 35.0% | |
| GTTAGAGAGTTATTGCCTTA+TGG | + | chr8_4:49290230-49290249 | Msa1330150:intron | 35.0% | |
| CACATACTTTGGTTGTTACA+CGG | - | chr8_4:49291114-49291133 | None:intergenic | 35.0% | |
| ! | TTGATCTTTTCCACTGATGT+TGG | - | chr8_4:49291152-49291171 | None:intergenic | 35.0% |
| CACTAATTGACAGACATGTT+TGG | - | chr8_4:49291363-49291382 | None:intergenic | 35.0% | |
| ACATGTCTGTCAATTAGTGA+AGG | + | chr8_4:49291364-49291383 | Msa1330150:intron | 35.0% | |
| AAAGGAAAGATGATCCCAAA+TGG | + | chr8_4:49291590-49291609 | Msa1330150:CDS | 35.0% | |
| CTTGCTAGTAGTTTCCATTT+GGG | - | chr8_4:49291607-49291626 | None:intergenic | 35.0% | |
| CTCCTTAGAATCTTATGAGA+GGG | - | chr8_4:49291946-49291965 | None:intergenic | 35.0% | |
| !! | GGGTGGTCTTATTTAAGGAA+GGG | - | chr8_4:49288578-49288597 | None:intergenic | 40.0% |
| !! | TGATGATTCTGAGATCCAAG+GGG | - | chr8_4:49288598-49288617 | None:intergenic | 40.0% |
| !! | GATGATGATTCTGAGATCCA+AGG | - | chr8_4:49288600-49288619 | None:intergenic | 40.0% |
| CAATTGGAGACAAACTAACC+AGG | - | chr8_4:49288807-49288826 | None:intergenic | 40.0% | |
| TTAACTCGGTATCCGATTCA+AGG | + | chr8_4:49288838-49288857 | Msa1330150:intron | 40.0% | |
| !!! | GTCATTTTTCATTCACAGCG+CGG | - | chr8_4:49289093-49289112 | None:intergenic | 40.0% |
| GCTGTGAATGAAAAATGACC+TGG | + | chr8_4:49289094-49289113 | Msa1330150:intron | 40.0% | |
| !!! | CCTGGTTTTTTACAGTTGCA+CGG | + | chr8_4:49289112-49289131 | Msa1330150:intron | 40.0% |
| !! | GCATCAAAGGTCTTGTTCAA+CGG | + | chr8_4:49289213-49289232 | Msa1330150:CDS | 40.0% |
| ACGGTTAACATCAGAAAACG+TGG | + | chr8_4:49289232-49289251 | Msa1330150:CDS | 40.0% | |
| GTTAACATCAGAAAACGTGG+TGG | + | chr8_4:49289235-49289254 | Msa1330150:CDS | 40.0% | |
| GTAGCTTCATACAACGGATA+CGG | - | chr8_4:49289301-49289320 | None:intergenic | 40.0% | |
| TGGTGAGTAGCTTCATACAA+CGG | - | chr8_4:49289307-49289326 | None:intergenic | 40.0% | |
| AACGCGGTTCAAAAAACTGA+AGG | + | chr8_4:49289335-49289354 | Msa1330150:CDS | 40.0% | |
| ACGCGGTTCAAAAAACTGAA+GGG | + | chr8_4:49289336-49289355 | Msa1330150:CDS | 40.0% | |
| TTCAAGCACAGGATCATGTT+TGG | - | chr8_4:49289375-49289394 | None:intergenic | 40.0% | |
| AGGATATCAAGTTCAAGCAC+AGG | - | chr8_4:49289386-49289405 | None:intergenic | 40.0% | |
| TATAGAGGAGAGAGAAATCG+AGG | + | chr8_4:49289587-49289606 | Msa1330150:intron | 40.0% | |
| TTGGAGCATATATGTACGGA+AGG | + | chr8_4:49289664-49289683 | Msa1330150:CDS | 40.0% | |
| TGGAGCATATATGTACGGAA+GGG | + | chr8_4:49289665-49289684 | Msa1330150:CDS | 40.0% | |
| TAGCTAAGTTGCATTAGGCA+TGG | - | chr8_4:49289931-49289950 | None:intergenic | 40.0% | |
| TGTCGATGAGTGATAAAACG+TGG | + | chr8_4:49290111-49290130 | Msa1330150:intron | 40.0% | |
| GTCGATGAGTGATAAAACGT+GGG | + | chr8_4:49290112-49290131 | Msa1330150:intron | 40.0% | |
| ! | CCTTATGGTGATGATAGTGT+GGG | + | chr8_4:49290245-49290264 | Msa1330150:intron | 40.0% |
| ATAAAGTCTCACCGTTGATC+AGG | + | chr8_4:49290836-49290855 | Msa1330150:intron | 40.0% | |
| TTCAAACACGCAATTGTGTG+TGG | + | chr8_4:49290957-49290976 | Msa1330150:intron | 40.0% | |
| AACGGCATCAAAATACAAGC+TGG | - | chr8_4:49291038-49291057 | None:intergenic | 40.0% | |
| !!! | AGCTTGTATTTTGATGCCGT+TGG | + | chr8_4:49291037-49291056 | Msa1330150:intron | 40.0% |
| TTTGGTTGTTACACGGTAGT+GGG | - | chr8_4:49291107-49291126 | None:intergenic | 40.0% | |
| CGTGTAACAACCAAAGTATG+TGG | + | chr8_4:49291112-49291131 | Msa1330150:intron | 40.0% | |
| ATGGACATGACCACATACTT+TGG | - | chr8_4:49291125-49291144 | None:intergenic | 40.0% | |
| ATTGACAGACATGTTTGGCA+TGG | - | chr8_4:49291358-49291377 | None:intergenic | 40.0% | |
| TGAGAATGGAGCAAGAGAAA+AGG | + | chr8_4:49291572-49291591 | Msa1330150:CDS | 40.0% | |
| CCTTGCTAGTAGTTTCCATT+TGG | - | chr8_4:49291608-49291627 | None:intergenic | 40.0% | |
| CCAAATGGAAACTACTAGCA+AGG | + | chr8_4:49291605-49291624 | Msa1330150:CDS | 40.0% | |
| ATGGAAACTACTAGCAAGGA+AGG | + | chr8_4:49291609-49291628 | Msa1330150:CDS | 40.0% | |
| GGAAAACATAACCTTAGCTG+AGG | - | chr8_4:49291638-49291657 | None:intergenic | 40.0% | |
| ! | TTTTCTCTTAGGGAGAGACA+AGG | - | chr8_4:49291659-49291678 | None:intergenic | 40.0% |
| ! | AATCGTGGGATCAGATGTTT+TGG | + | chr8_4:49291709-49291728 | Msa1330150:CDS | 40.0% |
| GGGTTTCAATTGTGTACGTA+AGG | + | chr8_4:49291812-49291831 | Msa1330150:three_prime_UTR | 40.0% | |
| TGTTAGTGGCTCTTCAATTG+AGG | + | chr8_4:49291845-49291864 | Msa1330150:three_prime_UTR | 40.0% | |
| TCTTATGAGAGGGCAAAATG+AGG | - | chr8_4:49291936-49291955 | None:intergenic | 40.0% | |
| TGCCCTCTCATAAGATTCTA+AGG | + | chr8_4:49291941-49291960 | Msa1330150:three_prime_UTR | 40.0% | |
| CCTCCTTAGAATCTTATGAG+AGG | - | chr8_4:49291947-49291966 | None:intergenic | 40.0% | |
| ! | CCTCTCATAAGATTCTAAGG+AGG | + | chr8_4:49291944-49291963 | Msa1330150:three_prime_UTR | 40.0% |
| !! | GGGGTGGTCTTATTTAAGGA+AGG | - | chr8_4:49288579-49288598 | None:intergenic | 45.0% |
| !! | CCAAGGGGTGGTCTTATTTA+AGG | - | chr8_4:49288583-49288602 | None:intergenic | 45.0% |
| CCTTAAATAAGACCACCCCT+TGG | + | chr8_4:49288580-49288599 | Msa1330150:five_prime_UTR | 45.0% | |
| GAATACCCAAACCACACCAA+TGG | + | chr8_4:49288708-49288727 | Msa1330150:CDS | 45.0% | |
| ACTAACCAGGATGCTTGTGT+GGG | - | chr8_4:49288794-49288813 | None:intergenic | 45.0% | |
| AACTAACCAGGATGCTTGTG+TGG | - | chr8_4:49288795-49288814 | None:intergenic | 45.0% | |
| CTACAAACCTGGATGAGTAG+AGG | - | chr8_4:49289028-49289047 | None:intergenic | 45.0% | |
| CCGTGCAACTGTAAAAAACC+AGG | - | chr8_4:49289115-49289134 | None:intergenic | 45.0% | |
| !!! | GGTTTTTTACAGTTGCACGG+AGG | + | chr8_4:49289115-49289134 | Msa1330150:intron | 45.0% |
| CAAATACGGAATCCACCTGT+TGG | + | chr8_4:49289148-49289167 | Msa1330150:CDS | 45.0% | |
| ATACAACGGATACGGAGATC+CGG | - | chr8_4:49289293-49289312 | None:intergenic | 45.0% | |
| ACTCACCAATCACTTCAACG+CGG | + | chr8_4:49289319-49289338 | Msa1330150:CDS | 45.0% | |
| TTGAACCGCGTTGAAGTGAT+TGG | - | chr8_4:49289327-49289346 | None:intergenic | 45.0% | |
| CGGTTCAAAAAACTGAAGGG+TGG | + | chr8_4:49289339-49289358 | Msa1330150:CDS | 45.0% | |
| ACTTGATATCCTCCGCTTCA+TGG | + | chr8_4:49289394-49289413 | Msa1330150:CDS | 45.0% | |
| TTTCGCTTTCGTCCATGAAG+CGG | - | chr8_4:49289409-49289428 | None:intergenic | 45.0% | |
| ! | GAAATCGAGGAAGCATAGAG+AGG | + | chr8_4:49289600-49289619 | Msa1330150:CDS | 45.0% |
| GTTGTATGCGGAACTTTCTG+AGG | + | chr8_4:49289630-49289649 | Msa1330150:CDS | 45.0% | |
| AACATGGTATGGTCCAACGT+CGG | - | chr8_4:49289695-49289714 | None:intergenic | 45.0% | |
| !! | CAGGTGGAGAATTTGCTACA+CGG | - | chr8_4:49289739-49289758 | None:intergenic | 45.0% |
| AGCAAATTCTCCACCTGTCA+AGG | + | chr8_4:49289742-49289761 | Msa1330150:CDS | 45.0% | |
| GCAAATTCTCCACCTGTCAA+GGG | + | chr8_4:49289743-49289762 | Msa1330150:CDS | 45.0% | |
| AACATGCAAGAAGAGGGTGA+AGG | + | chr8_4:49289792-49289811 | Msa1330150:CDS | 45.0% | |
| ACATGCAAGAAGAGGGTGAA+GGG | + | chr8_4:49289793-49289812 | Msa1330150:CDS | 45.0% | |
| CTTGCAATGTTCCTCTTTGC+AGG | + | chr8_4:49289890-49289909 | Msa1330150:CDS | 45.0% | |
| CGTGGGAAAAATAGAGCCAA+TGG | + | chr8_4:49290129-49290148 | Msa1330150:intron | 45.0% | |
| ! | GCCTTATGGTGATGATAGTG+TGG | + | chr8_4:49290244-49290263 | Msa1330150:intron | 45.0% |
| CCCACACTATCATCACCATA+AGG | - | chr8_4:49290248-49290267 | None:intergenic | 45.0% | |
| ! | TATGGTGATGATAGTGTGGG+TGG | + | chr8_4:49290248-49290267 | Msa1330150:intron | 45.0% |
| CTTTGGTTGTTACACGGTAG+TGG | - | chr8_4:49291108-49291127 | None:intergenic | 45.0% | |
| !! | TTCCACTGATGTTGGTGTCA+TGG | - | chr8_4:49291144-49291163 | None:intergenic | 45.0% |
| TACCTTCAACTTGGGAAGCA+TGG | + | chr8_4:49291323-49291342 | Msa1330150:intron | 45.0% | |
| ! | AACCATGCTTCCCAAGTTGA+AGG | - | chr8_4:49291328-49291347 | None:intergenic | 45.0% |
| AGAGTGACCATAGACAATCG+TGG | + | chr8_4:49291694-49291713 | Msa1330150:CDS | 45.0% | |
| GAGTGACCATAGACAATCGT+GGG | + | chr8_4:49291695-49291714 | Msa1330150:CDS | 45.0% | |
| TCTGATCCCACGATTGTCTA+TGG | - | chr8_4:49291704-49291723 | None:intergenic | 45.0% | |
| !! | TGATTCTGAGATCCAAGGGG+TGG | - | chr8_4:49288595-49288614 | None:intergenic | 50.0% |
| TACCCAAACCACACCAATGG+AGG | + | chr8_4:49288711-49288730 | Msa1330150:CDS | 50.0% | |
| GACCTCCATTGGTGTGGTTT+GGG | - | chr8_4:49288716-49288735 | None:intergenic | 50.0% | |
| TAAGACGACCTCCATTGGTG+TGG | - | chr8_4:49288722-49288741 | None:intergenic | 50.0% | |
| CTCGAAAACAGGAGATACCG+AGG | - | chr8_4:49288910-49288929 | None:intergenic | 50.0% | |
| TGGAAGGAACGCCGTGAATT+TGG | - | chr8_4:49288980-49288999 | None:intergenic | 50.0% | |
| GTAGCCGATGAAAGCGGTTA+CGG | - | chr8_4:49289006-49289025 | None:intergenic | 50.0% | |
| GTAGAGGTAGCCGATGAAAG+CGG | - | chr8_4:49289012-49289031 | None:intergenic | 50.0% | |
| CAGTTGCACGGAGGATGAAA+TGG | + | chr8_4:49289124-49289143 | Msa1330150:intron | 50.0% | |
| ACACGTGAGATAGTGCCAAC+AGG | - | chr8_4:49289166-49289185 | None:intergenic | 50.0% | |
| ! | GCACAGGATCATGTTTGGTG+AGG | - | chr8_4:49289370-49289389 | None:intergenic | 50.0% |
| ! | AGGAAGCATAGAGAGGAGCA+AGG | + | chr8_4:49289607-49289626 | Msa1330150:CDS | 50.0% |
| ! | GGAAGCATAGAGAGGAGCAA+GGG | + | chr8_4:49289608-49289627 | Msa1330150:CDS | 50.0% |
| AGAGGAGCAAGGGTTGTATG+CGG | + | chr8_4:49289618-49289637 | Msa1330150:CDS | 50.0% | |
| !! | TTCTGAGGCGATGGAGTGTT+TGG | + | chr8_4:49289645-49289664 | Msa1330150:CDS | 50.0% |
| CGTTGGACCATACCATGTTG+AGG | + | chr8_4:49289696-49289715 | Msa1330150:CDS | 50.0% | |
| ! | ATGATAGTGTGGGTGGTGGT+CGG | + | chr8_4:49290255-49290274 | Msa1330150:intron | 50.0% |
| TGGTCACACCAACACACTCA+CGG | + | chr8_4:49290661-49290680 | Msa1330150:intron | 50.0% | |
| AATGGATGCCGTGAGTGTGT+TGG | - | chr8_4:49290672-49290691 | None:intergenic | 50.0% | |
| ! | CACACTCACGGCATCCATTT+TGG | + | chr8_4:49290673-49290692 | Msa1330150:intron | 50.0% |
| GACTACGATCGATGGACCAA+CGG | - | chr8_4:49291056-49291075 | None:intergenic | 50.0% | |
| GTCCATGACACCAACATCAG+TGG | + | chr8_4:49291139-49291158 | Msa1330150:intron | 50.0% | |
| AAGGAAGGTTGCCTCAGCTA+AGG | + | chr8_4:49291624-49291643 | Msa1330150:CDS | 50.0% | |
| CGACCTCCATTGGTGTGGTT+TGG | - | chr8_4:49288717-49288736 | None:intergenic | 55.0% | |
| TCGGGTAAGACGACCTCCAT+TGG | - | chr8_4:49288727-49288746 | None:intergenic | 55.0% | |
| TCGGAGCTGCGTTGTTTACG+CGG | - | chr8_4:49288948-49288967 | None:intergenic | 55.0% | |
| ACCGCCGTAACCGCTTTCAT+CGG | + | chr8_4:49288999-49289018 | Msa1330150:CDS | 55.0% | |
| TCGGCTACCTCTACTCATCC+AGG | + | chr8_4:49289018-49289037 | Msa1330150:CDS | 55.0% | |
| CGTGAGATAGTGCCAACAGG+TGG | - | chr8_4:49289163-49289182 | None:intergenic | 55.0% | |
| TGGATGTACTCCAACTCGCC+AGG | + | chr8_4:49289255-49289274 | Msa1330150:CDS | 55.0% | |
| !! | TGCGGAACTTTCTGAGGCGA+TGG | + | chr8_4:49289636-49289655 | Msa1330150:CDS | 55.0% |
| AAGCTGAAGCCCTTGACAGG+TGG | - | chr8_4:49289755-49289774 | None:intergenic | 55.0% | |
| CAGAAGCTGAAGCCCTTGAC+AGG | - | chr8_4:49289758-49289777 | None:intergenic | 55.0% | |
| TGCAAGAAGAGGGTGAAGGG+AGG | + | chr8_4:49289796-49289815 | Msa1330150:CDS | 55.0% | |
| ! | GCTGGAGGTGCAAACGTATG+TGG | + | chr8_4:49289821-49289840 | Msa1330150:CDS | 55.0% |
| ! | GGTGATGATAGTGTGGGTGG+TGG | + | chr8_4:49290251-49290270 | Msa1330150:intron | 55.0% |
| TCCAGCCCACACAAGCATCC+TGG | + | chr8_4:49288786-49288805 | Msa1330150:CDS | 60.0% | |
| ACCAGGATGCTTGTGTGGGC+TGG | - | chr8_4:49288790-49288809 | None:intergenic | 60.0% | |
| AAAGCGGTTACGGCGGTGGA+AGG | - | chr8_4:49288996-49289015 | None:intergenic | 60.0% | |
| GATGAAAGCGGTTACGGCGG+TGG | - | chr8_4:49289000-49289019 | None:intergenic | 60.0% | |
| GCCGATGAAAGCGGTTACGG+CGG | - | chr8_4:49289003-49289022 | None:intergenic | 60.0% | |
| CGCTTTCGTCCATGAAGCGG+AGG | - | chr8_4:49289406-49289425 | None:intergenic | 60.0% | |
| CATCGCAGAGCCTGGCGAGT+TGG | - | chr8_4:49289268-49289287 | None:intergenic | 65.0% | |
| ATCCGGTGCATCGCAGAGCC+TGG | - | chr8_4:49289276-49289295 | None:intergenic | 65.0% | |
| ! | ACGGAAGGGTGCACCGACGT+TGG | + | chr8_4:49289679-49289698 | Msa1330150:CDS | 65.0% |
| AGAGGGTGAAGGGAGGCTGC+TGG | + | chr8_4:49289803-49289822 | Msa1330150:CDS | 65.0% | |
| CGCCAGGCTCTGCGATGCAC+CGG | + | chr8_4:49289271-49289290 | Msa1330150:CDS | 70.0% | |
| GGGTGAAGGGAGGCTGCTGG+AGG | + | chr8_4:49289806-49289825 | Msa1330150:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 49288557 | 49292063 | 49288557 | ID=Msa1330150;Name=Msa1330150 |
| chr8_4 | mRNA | 49288557 | 49292063 | 49288557 | ID=Msa1330150-mRNA-1;Parent=Msa1330150;Name=Msa1330150-mRNA-1;_AED=0.07;_eAED=0.07;_QI=143|1|1|1|1|1|5|277|363 |
| chr8_4 | exon | 49288557 | 49288807 | 49288557 | ID=Msa1330150-mRNA-1:exon:14242;Parent=Msa1330150-mRNA-1 |
| chr8_4 | exon | 49288906 | 49289039 | 49288906 | ID=Msa1330150-mRNA-1:exon:14243;Parent=Msa1330150-mRNA-1 |
| chr8_4 | exon | 49289127 | 49289430 | 49289127 | ID=Msa1330150-mRNA-1:exon:14244;Parent=Msa1330150-mRNA-1 |
| chr8_4 | exon | 49289592 | 49289911 | 49289592 | ID=Msa1330150-mRNA-1:exon:14245;Parent=Msa1330150-mRNA-1 |
| chr8_4 | exon | 49291561 | 49292063 | 49291561 | ID=Msa1330150-mRNA-1:exon:14246;Parent=Msa1330150-mRNA-1 |
| chr8_4 | five_prime_UTR | 49288557 | 49288699 | 49288557 | ID=Msa1330150-mRNA-1:five_prime_utr;Parent=Msa1330150-mRNA-1 |
| chr8_4 | CDS | 49288700 | 49288807 | 49288700 | ID=Msa1330150-mRNA-1:cds;Parent=Msa1330150-mRNA-1 |
| chr8_4 | CDS | 49288906 | 49289039 | 49288906 | ID=Msa1330150-mRNA-1:cds;Parent=Msa1330150-mRNA-1 |
| chr8_4 | CDS | 49289127 | 49289430 | 49289127 | ID=Msa1330150-mRNA-1:cds;Parent=Msa1330150-mRNA-1 |
| chr8_4 | CDS | 49289592 | 49289911 | 49289592 | ID=Msa1330150-mRNA-1:cds;Parent=Msa1330150-mRNA-1 |
| chr8_4 | CDS | 49291561 | 49291786 | 49291561 | ID=Msa1330150-mRNA-1:cds;Parent=Msa1330150-mRNA-1 |
| chr8_4 | three_prime_UTR | 49291787 | 49292063 | 49291787 | ID=Msa1330150-mRNA-1:three_prime_utr;Parent=Msa1330150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
