Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932780 | A0A072U4W9 | 95.782 | 569 | 11 | 6 | 1 | 560 | 1 | 565 | 0.0 | 1061 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001780 | Msa0932780 | -0.824928 | 6.187465e-54 | -8.615850e-47 |
| Msa0006390 | Msa0932780 | -0.809387 | 1.939986e-50 | -8.615850e-47 |
| Msa0017510 | Msa0932780 | -0.817469 | 3.245784e-52 | -8.615850e-47 |
| Msa0032840 | Msa0932780 | 0.834632 | 2.678957e-56 | -8.615850e-47 |
| Msa0038350 | Msa0932780 | 0.803735 | 3.024911e-49 | -8.615850e-47 |
| Msa0040450 | Msa0932780 | -0.809973 | 1.451607e-50 | -8.615850e-47 |
| Msa0044540 | Msa0932780 | 0.807351 | 5.274088e-50 | -8.615850e-47 |
| Msa0107250 | Msa0932780 | -0.800960 | 1.127684e-48 | -8.615850e-47 |
| Msa0110970 | Msa0932780 | -0.816362 | 5.749487e-52 | -8.615850e-47 |
| Msa0114540 | Msa0932780 | 0.841685 | 4.090278e-58 | -8.615850e-47 |
| Msa0607200 | Msa0932780 | -0.814448 | 1.532897e-51 | -8.615850e-47 |
| Msa0621590 | Msa0932780 | -0.825781 | 3.888112e-54 | -8.615850e-47 |
| Msa0625530 | Msa0932780 | 0.807900 | 4.032213e-50 | -8.615850e-47 |
| Msa0638280 | Msa0932780 | -0.816486 | 5.395136e-52 | -8.615850e-47 |
| Msa0638320 | Msa0932780 | -0.821886 | 3.180947e-53 | -8.615850e-47 |
| Msa0649980 | Msa0932780 | -0.812315 | 4.509025e-51 | -8.615850e-47 |
| Msa0657670 | Msa0932780 | -0.825238 | 5.227829e-54 | -8.615850e-47 |
| Msa0657970 | Msa0932780 | -0.802588 | 5.225744e-49 | -8.615850e-47 |
| Msa0661190 | Msa0932780 | 0.816095 | 6.596936e-52 | -8.615850e-47 |
| Msa0677270 | Msa0932780 | -0.813796 | 2.135319e-51 | -8.615850e-47 |
| Msa0690520 | Msa0932780 | -0.801557 | 8.511032e-49 | -8.615850e-47 |
| Msa0714560 | Msa0932780 | 0.811323 | 7.414190e-51 | -8.615850e-47 |
| Msa0743130 | Msa0932780 | 0.814825 | 1.265060e-51 | -8.615850e-47 |
| Msa0753790 | Msa0932780 | -0.815293 | 9.959187e-52 | -8.615850e-47 |
| Msa0754720 | Msa0932780 | 0.811823 | 5.772720e-51 | -8.615850e-47 |
| Msa0756630 | Msa0932780 | 0.845803 | 3.232590e-59 | -8.615850e-47 |
| Msa0790390 | Msa0932780 | 0.805814 | 1.112861e-49 | -8.615850e-47 |
| Msa0802470 | Msa0932780 | 0.828048 | 1.116545e-54 | -8.615850e-47 |
| Msa0812990 | Msa0932780 | -0.823159 | 1.609243e-53 | -8.615850e-47 |
| Msa0813740 | Msa0932780 | -0.801546 | 8.556596e-49 | -8.615850e-47 |
| Msa0130570 | Msa0932780 | -0.803566 | 3.279910e-49 | -8.615850e-47 |
| Msa0138820 | Msa0932780 | 0.806045 | 9.953645e-50 | -8.615850e-47 |
| Msa0143140 | Msa0932780 | 0.831002 | 2.136081e-55 | -8.615850e-47 |
| Msa0157290 | Msa0932780 | -0.817272 | 3.594804e-52 | -8.615850e-47 |
| Msa0168100 | Msa0932780 | -0.802945 | 4.408326e-49 | -8.615850e-47 |
| Msa0183620 | Msa0932780 | -0.800596 | 1.337912e-48 | -8.615850e-47 |
| Msa0188680 | Msa0932780 | 0.820855 | 5.501770e-53 | -8.615850e-47 |
| Msa0193120 | Msa0932780 | -0.806293 | 8.826366e-50 | -8.615850e-47 |
| Msa0195770 | Msa0932780 | -0.800745 | 1.247707e-48 | -8.615850e-47 |
| Msa0196130 | Msa0932780 | 0.847759 | 9.434589e-60 | -8.615850e-47 |
| Msa0220580 | Msa0932780 | -0.802668 | 5.029070e-49 | -8.615850e-47 |
| Msa0220740 | Msa0932780 | -0.813163 | 2.941352e-51 | -8.615850e-47 |
| Msa0230550 | Msa0932780 | 0.827626 | 1.410334e-54 | -8.615850e-47 |
| Msa0238070 | Msa0932780 | 0.813779 | 2.153220e-51 | -8.615850e-47 |
| Msa0370110 | Msa0932780 | -0.813270 | 2.786056e-51 | -8.615850e-47 |
| Msa0377400 | Msa0932780 | -0.807893 | 4.047162e-50 | -8.615850e-47 |
| Msa0380040 | Msa0932780 | -0.808658 | 2.779233e-50 | -8.615850e-47 |
| Msa0390400 | Msa0932780 | 0.804343 | 2.260513e-49 | -8.615850e-47 |
| Msa0414950 | Msa0932780 | 0.818347 | 2.055142e-52 | -8.615850e-47 |
| Msa0419820 | Msa0932780 | -0.822473 | 2.324325e-53 | -8.615850e-47 |
| Msa0425010 | Msa0932780 | -0.801579 | 8.424877e-49 | -8.615850e-47 |
| Msa0436280 | Msa0932780 | 0.828463 | 8.864899e-55 | -8.615850e-47 |
| Msa0442850 | Msa0932780 | -0.803481 | 3.414825e-49 | -8.615850e-47 |
| Msa0455160 | Msa0932780 | -0.815306 | 9.889349e-52 | -8.615850e-47 |
| Msa0459770 | Msa0932780 | 0.832409 | 9.610025e-56 | -8.615850e-47 |
| Msa0480980 | Msa0932780 | -0.813783 | 2.149593e-51 | -8.615850e-47 |
| Msa0258760 | Msa0932780 | -0.801308 | 9.572360e-49 | -8.615850e-47 |
| Msa0260950 | Msa0932780 | 0.805472 | 1.313250e-49 | -8.615850e-47 |
| Msa0267760 | Msa0932780 | -0.801772 | 7.691853e-49 | -8.615850e-47 |
| Msa0270220 | Msa0932780 | 0.808605 | 2.852490e-50 | -8.615850e-47 |
| Msa0272480 | Msa0932780 | 0.801531 | 8.617382e-49 | -8.615850e-47 |
| Msa0306110 | Msa0932780 | 0.829658 | 4.549954e-55 | -8.615850e-47 |
| Msa0307830 | Msa0932780 | 0.815341 | 9.715681e-52 | -8.615850e-47 |
| Msa0312690 | Msa0932780 | 0.809444 | 1.886411e-50 | -8.615850e-47 |
| Msa0320100 | Msa0932780 | -0.803785 | 2.952928e-49 | -8.615850e-47 |
| Msa0326670 | Msa0932780 | -0.801244 | 9.867107e-49 | -8.615850e-47 |
| Msa0333720 | Msa0932780 | 0.816330 | 5.847595e-52 | -8.615850e-47 |
| Msa0336040 | Msa0932780 | 0.814205 | 1.734618e-51 | -8.615850e-47 |
| Msa0344830 | Msa0932780 | -0.803496 | 3.391545e-49 | -8.615850e-47 |
| Msa0347360 | Msa0932780 | -0.814600 | 1.418761e-51 | -8.615850e-47 |
| Msa0358170 | Msa0932780 | -0.814273 | 1.675646e-51 | -8.615850e-47 |
| Msa0362780 | Msa0932780 | -0.816599 | 5.088698e-52 | -8.615850e-47 |
| Msa0503580 | Msa0932780 | -0.804509 | 2.088272e-49 | -8.615850e-47 |
| Msa0508200 | Msa0932780 | -0.808224 | 3.440519e-50 | -8.615850e-47 |
| Msa0514290 | Msa0932780 | 0.822447 | 2.357680e-53 | -8.615850e-47 |
| Msa0518040 | Msa0932780 | -0.805748 | 1.149380e-49 | -8.615850e-47 |
| Msa0526710 | Msa0932780 | -0.811677 | 6.211127e-51 | -8.615850e-47 |
| Msa0534440 | Msa0932780 | -0.812289 | 4.568501e-51 | -8.615850e-47 |
| Msa0535030 | Msa0932780 | -0.821008 | 5.073225e-53 | -8.615850e-47 |
| Msa0535060 | Msa0932780 | -0.822920 | 1.829492e-53 | -8.615850e-47 |
| Msa0547140 | Msa0932780 | -0.803838 | 2.879652e-49 | -8.615850e-47 |
| Msa0577940 | Msa0932780 | 0.805770 | 1.136846e-49 | -8.615850e-47 |
| Msa0579290 | Msa0932780 | -0.810799 | 9.630732e-51 | -8.615850e-47 |
| Msa0579390 | Msa0932780 | -0.812346 | 4.440601e-51 | -8.615850e-47 |
| Msa0581760 | Msa0932780 | -0.834031 | 3.791166e-56 | -8.615850e-47 |
| Msa0585000 | Msa0932780 | 0.832264 | 1.043728e-55 | -8.615850e-47 |
| Msa0591770 | Msa0932780 | -0.809303 | 2.022990e-50 | -8.615850e-47 |
| Msa0601850 | Msa0932780 | -0.818518 | 1.879859e-52 | -8.615850e-47 |
| Msa0844240 | Msa0932780 | -0.807505 | 4.892533e-50 | -8.615850e-47 |
| Msa0850960 | Msa0932780 | -0.827064 | 1.922727e-54 | -8.615850e-47 |
| Msa0853540 | Msa0932780 | -0.841460 | 4.688716e-58 | -8.615850e-47 |
| Msa0880140 | Msa0932780 | -0.816078 | 6.655813e-52 | -8.615850e-47 |
| Msa0891040 | Msa0932780 | -0.807094 | 5.979501e-50 | -8.615850e-47 |
| Msa0893480 | Msa0932780 | 0.804177 | 2.448072e-49 | -8.615850e-47 |
| Msa0922410 | Msa0932780 | -0.800734 | 1.253938e-48 | -8.615850e-47 |
| Msa0932660 | Msa0932780 | 0.867487 | 1.319496e-65 | -8.615850e-47 |
| Msa0932780 | Msa0936270 | -0.807436 | 5.060234e-50 | -8.615850e-47 |
| Msa0932780 | Msa0944190 | -0.805384 | 1.370115e-49 | -8.615850e-47 |
| Msa0932780 | Msa0959360 | -0.804302 | 2.305879e-49 | -8.615850e-47 |
| Msa0932780 | Msa0970570 | 0.939403 | 1.347106e-99 | -8.615850e-47 |
| Msa0932780 | Msa0980500 | -0.809621 | 1.728047e-50 | -8.615850e-47 |
| Msa0932780 | Msa1004900 | 0.825027 | 5.861705e-54 | -8.615850e-47 |
| Msa0932780 | Msa1040120 | -0.820219 | 7.700432e-53 | -8.615850e-47 |
| Msa0932780 | Msa1069990 | -0.802346 | 5.860680e-49 | -8.615850e-47 |
| Msa0932780 | Msa1075220 | 0.807859 | 4.115116e-50 | -8.615850e-47 |
| Msa0932780 | Msa1081820 | -0.804418 | 2.181340e-49 | -8.615850e-47 |
| Msa0932780 | Msa1097800 | -0.809074 | 2.264383e-50 | -8.615850e-47 |
| Msa0932780 | Msa1098560 | -0.815182 | 1.053801e-51 | -8.615850e-47 |
| Msa0932780 | Msa1116130 | 0.817287 | 3.566420e-52 | -8.615850e-47 |
| Msa0932780 | Msa1147570 | -0.800658 | 1.299741e-48 | -8.615850e-47 |
| Msa0932780 | Msa1181550 | -0.806212 | 9.179441e-50 | -8.615850e-47 |
| Msa0932780 | Msa1205130 | -0.802382 | 5.760581e-49 | -8.615850e-47 |
| Msa0932780 | Msa1211150 | 0.835918 | 1.268461e-56 | -8.615850e-47 |
| Msa0932780 | Msa1211310 | 0.814090 | 1.838672e-51 | -8.615850e-47 |
| Msa0932780 | Msa1222970 | -0.829166 | 5.994407e-55 | -8.615850e-47 |
| Msa0932780 | Msa1228210 | -0.811926 | 5.482712e-51 | -8.615850e-47 |
| Msa0932780 | Msa1242220 | -0.818456 | 1.941339e-52 | -8.615850e-47 |
| Msa0932780 | Msa1242230 | -0.837906 | 3.941033e-57 | -8.615850e-47 |
| Msa0932780 | Msa1242240 | -0.849135 | 3.927115e-60 | -8.615850e-47 |
| Msa0932780 | Msa1253930 | 0.820908 | 5.349740e-53 | -8.615850e-47 |
| Msa0932780 | Msa1261250 | -0.807705 | 4.436440e-50 | -8.615850e-47 |
| Msa0932780 | Msa1264020 | -0.839458 | 1.565403e-57 | -8.615850e-47 |
| Msa0932780 | Msa1269580 | 0.822799 | 1.951928e-53 | -8.615850e-47 |
| Msa0932780 | Msa1271280 | -0.826471 | 2.663490e-54 | -8.615850e-47 |
| Msa0932780 | Msa1271300 | -0.813441 | 2.555840e-51 | -8.615850e-47 |
| Msa0932780 | Msa1283840 | -0.842798 | 2.074911e-58 | -8.615850e-47 |
| Msa0932780 | Msa1283860 | -0.805126 | 1.551479e-49 | -8.615850e-47 |
| Msa0932780 | Msa1284260 | -0.844747 | 6.243115e-59 | -8.615850e-47 |
| Msa0932780 | Msa1299300 | 0.810311 | 1.227943e-50 | -8.615850e-47 |
| Msa0932780 | Msa1307660 | 0.806433 | 8.246617e-50 | -8.615850e-47 |
| Msa0932780 | Msa1322860 | -0.838665 | 2.512171e-57 | -8.615850e-47 |
| Msa0932780 | Msa1322890 | -0.806031 | 1.001900e-49 | -8.615850e-47 |
| Msa0932780 | Msa1327050 | -0.819508 | 1.119490e-52 | -8.615850e-47 |
| Msa0932780 | Msa1364470 | 0.836908 | 7.102326e-57 | -8.615850e-47 |
| Msa0932780 | Msa1367080 | -0.829971 | 3.817768e-55 | -8.615850e-47 |
| Msa0932780 | Msa1403580 | 0.809452 | 1.879379e-50 | -8.615850e-47 |
| Msa0932780 | Msa1411070 | -0.829214 | 5.833366e-55 | -8.615850e-47 |
| Msa0932780 | Msa1427760 | -0.811267 | 7.627154e-51 | -8.615850e-47 |
| Msa0932780 | Msa1429150 | -0.832928 | 7.144303e-56 | -8.615850e-47 |
| Msa0932780 | Msa1429360 | 0.828471 | 8.827738e-55 | -8.615850e-47 |
| Msa0932780 | Msa1438970 | -0.807652 | 4.552770e-50 | -8.615850e-47 |
| Msa0932780 | Msa1443290 | 0.817075 | 3.979337e-52 | -8.615850e-47 |
| Msa0932780 | Msa1449250 | 0.805580 | 1.246315e-49 | -8.615850e-47 |
| Msa0932780 | Msa1454910 | 0.811487 | 6.832691e-51 | -8.615850e-47 |
| Msa0932780 | Msa1461250 | 0.831030 | 2.102889e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932780 | MtrunA17_Chr6g0449531 | 95.782 | 569 | 11 | 6 | 1 | 560 | 1 | 565 | 0.0 | 1061 |
| Msa0932780 | MtrunA17_Chr6g0449551 | 64.810 | 395 | 76 | 7 | 160 | 530 | 1 | 356 | 7.77e-135 | 396 |
| Msa0932780 | MtrunA17_Chr4g0021121 | 29.885 | 174 | 93 | 4 | 55 | 215 | 12 | 169 | 6.01e-19 | 90.1 |
| Msa0932780 | MtrunA17_Chr6g0449541 | 54.082 | 98 | 32 | 3 | 54 | 147 | 24 | 112 | 9.75e-19 | 82.0 |
| Msa0932780 | MtrunA17_Chr2g0324351 | 30.952 | 168 | 110 | 3 | 48 | 215 | 6 | 167 | 2.08e-16 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932780 | AT3G01560.1 | 43.357 | 572 | 225 | 19 | 1 | 546 | 1 | 499 | 2.19e-91 | 290 |
| Msa0932780 | AT3G01560.2 | 44.884 | 430 | 166 | 14 | 124 | 546 | 5 | 370 | 2.35e-68 | 226 |
| Msa0932780 | AT5G14540.1 | 41.692 | 331 | 126 | 11 | 1 | 303 | 7 | 298 | 1.60e-56 | 199 |
| Msa0932780 | AT4G28300.1 | 31.325 | 166 | 103 | 3 | 54 | 213 | 14 | 174 | 8.57e-16 | 80.5 |
| Msa0932780 | AT4G28300.2 | 37.778 | 90 | 56 | 0 | 124 | 213 | 27 | 116 | 6.04e-15 | 77.8 |
Find 206 sgRNAs with CRISPR-Local
Find 449 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAATACGACGTCGTTTA+TGG | 0.118460 | 6_3:-1037568 | Msa0932780:CDS |
| TCTGGATATGGTACATTATC+TGG | 0.152917 | 6_3:-1032113 | Msa0932780:CDS |
| GGAGGTTGAGGAGGTGCATT+AGG | 0.241389 | 6_3:+1032602 | None:intergenic |
| GCTTATCCAGCACTGTATTT+AGG | 0.248589 | 6_3:+1031793 | None:intergenic |
| TTTCCACGTTATCTTTGATT+TGG | 0.250493 | 6_3:-1031375 | Msa0932780:three_prime_UTR |
| GGCAGTTGGTATTGCTGATT+TGG | 0.254348 | 6_3:+1032461 | None:intergenic |
| GTTCTCCTGGAGCTGGTAAC+AGG | 0.264309 | 6_3:-1031920 | Msa0932780:CDS |
| TCAATAAATAAAAGTGGATT+TGG | 0.268544 | 6_3:-1031462 | Msa0932780:three_prime_UTR |
| TTGCAGTTGAGGTGGATTTC+CGG | 0.277046 | 6_3:+1032316 | None:intergenic |
| CTAACTGTTAACAGATTTGA+TGG | 0.282200 | 6_3:-1031402 | Msa0932780:three_prime_UTR |
| AGTGAGAATTACTTTGGAAT+TGG | 0.300882 | 6_3:+1037296 | None:intergenic |
| CAACCTTCCCAACAGTTCTA+TGG | 0.307696 | 6_3:-1032191 | Msa0932780:CDS |
| TGTGCAGAACTATGGTTCTT+TGG | 0.308399 | 6_3:-1034405 | Msa0932780:intron |
| ATTGCTGATTTGGAATTTCC+TGG | 0.315081 | 6_3:+1032471 | None:intergenic |
| CTTCTTCTTCGTGTTGTTCA+CGG | 0.325218 | 6_3:+1037466 | None:intergenic |
| GAAGATATTGTTGAGTTTGC+AGG | 0.333603 | 6_3:+1032669 | None:intergenic |
| GGGATCTGAGAGTATTGATT+TGG | 0.338854 | 6_3:+1032545 | None:intergenic |
| TGAACAGGTGATGGCAAGTA+TGG | 0.342162 | 6_3:+1032497 | None:intergenic |
| AGATGGTGGCTGGCGGAGAT+TGG | 0.345438 | 6_3:+1032235 | None:intergenic |
| TTCCACGTTATCTTTGATTT+GGG | 0.346573 | 6_3:-1031374 | Msa0932780:three_prime_UTR |
| GGATGTGGCTGCTGAGTTAA+AGG | 0.364654 | 6_3:+1032440 | None:intergenic |
| CAACATATACAGGTGCAAAC+AGG | 0.369517 | 6_3:-1032848 | Msa0932780:intron |
| GGAAGGTTGAGGAGGTCCGC+TGG | 0.372446 | 6_3:+1032205 | None:intergenic |
| TCTGAGGAACAGTTGGGGTT+GGG | 0.372597 | 6_3:+1032525 | None:intergenic |
| GGTGAGTTCTGGTTTCTACT+TGG | 0.372649 | 6_3:+1034240 | None:intergenic |
| AGTCGACAAAGTTGCCACTA+TGG | 0.375561 | 6_3:-1031880 | Msa0932780:CDS |
| GTTTATGGACAAACAGATAA+TGG | 0.379393 | 6_3:-1037553 | Msa0932780:CDS |
| TATTGATTTGGAAGTTGAGC+TGG | 0.379878 | 6_3:+1032557 | None:intergenic |
| TCACCATCTTGAGAGTTCTA+TGG | 0.380351 | 6_3:-1034222 | Msa0932780:CDS |
| GCGAGTTACTCTTCTGGATA+TGG | 0.385894 | 6_3:-1032125 | Msa0932780:CDS |
| AACGATGAAGAAGAATTATC+AGG | 0.388069 | 6_3:+1037342 | None:intergenic |
| GAGGTTGAGGAGGTGCATTA+GGG | 0.392897 | 6_3:+1032603 | None:intergenic |
| GTCGATGAAATCGTTGTTGT+TGG | 0.399316 | 6_3:+1037503 | None:intergenic |
| TCAAAGAAACAAGAACAAAA+TGG | 0.400272 | 6_3:+1031553 | None:intergenic |
| AGATCAAGATAGTCATGAAT+TGG | 0.401418 | 6_3:+1031500 | None:intergenic |
| CCTACTGAGCCATATCGATA+TGG | 0.402683 | 6_3:-1032089 | Msa0932780:CDS |
| CCTGGTGCGAGTTACTCTTC+TGG | 0.414200 | 6_3:-1032131 | Msa0932780:CDS |
| CATAAGGTGGTTCCTCTAGA+TGG | 0.414395 | 6_3:+1032279 | None:intergenic |
| ACTCTCAAGATGGTGAGTTC+TGG | 0.417745 | 6_3:+1034229 | None:intergenic |
| TCTGCAGTAAGTGGTGGTTC+AGG | 0.419285 | 6_3:-1031942 | Msa0932780:CDS |
| GATGGTGGCTGGCGGAGATT+GGG | 0.419902 | 6_3:+1032236 | None:intergenic |
| GGTCCGCTGGGTGGCTGAGA+TGG | 0.426894 | 6_3:+1032218 | None:intergenic |
| GTTCACGGTTCTTCTTGTTA+AGG | 0.428250 | 6_3:+1037481 | None:intergenic |
| GGAATTTCCTGGGATTGAAC+AGG | 0.428460 | 6_3:+1032482 | None:intergenic |
| TGTGGGAGTACGCGGGCAGT+AGG | 0.431246 | 6_3:+1031981 | None:intergenic |
| TATGGCGGACCACCTCAATA+TGG | 0.437524 | 6_3:-1032071 | Msa0932780:CDS |
| GAGTTCTATGGATGATTTGA+AGG | 0.438756 | 6_3:-1034210 | Msa0932780:CDS |
| CTCTGAGGAACAGTTGGGGT+TGG | 0.439164 | 6_3:+1032524 | None:intergenic |
| TGGGTGGCTGAGATGGTGGC+TGG | 0.440005 | 6_3:+1032225 | None:intergenic |
| AATTTGCATCATGTTCTAGA+AGG | 0.442921 | 6_3:-1034281 | Msa0932780:CDS |
| GGAATCAGAATTCCAAGGTC+TGG | 0.444578 | 6_3:+1037317 | None:intergenic |
| TATCGCTTCTTTCGCTATGA+TGG | 0.445668 | 6_3:-1031681 | Msa0932780:three_prime_UTR |
| GCTTTGAAGGTTTATGAGGA+AGG | 0.455373 | 6_3:-1031628 | Msa0932780:three_prime_UTR |
| TTTCGCTATGATGGTTTATG+AGG | 0.460042 | 6_3:-1031672 | Msa0932780:three_prime_UTR |
| TTGCTGATTTGGAATTTCCT+GGG | 0.460881 | 6_3:+1032472 | None:intergenic |
| GTGAGTTCTGGTTTCTACTT+GGG | 0.461793 | 6_3:+1034241 | None:intergenic |
| TGGGTAACCGTTTCCACCAC+TGG | 0.462468 | 6_3:+1032010 | None:intergenic |
| GATCTCTCTGAGGAACAGTT+GGG | 0.462714 | 6_3:+1032519 | None:intergenic |
| AAGCTTCTGAGAATTGTTTG+AGG | 0.463515 | 6_3:+1037602 | None:intergenic |
| GGTGCCCCTGGTTGAGGATG+TGG | 0.464633 | 6_3:+1032425 | None:intergenic |
| CTGGATATGGTACATTATCT+GGG | 0.467302 | 6_3:-1032112 | Msa0932780:CDS |
| ACCTCAACTGCAATCTTCCA+TGG | 0.469026 | 6_3:-1032306 | Msa0932780:CDS |
| ACAGATGAAGTTTGCTGCAC+AGG | 0.469179 | 6_3:+1032707 | None:intergenic |
| TTGTCGACTATATCATCAAC+AGG | 0.475344 | 6_3:+1031894 | None:intergenic |
| TGCGGAGGTGCCCCTGGTTG+AGG | 0.476318 | 6_3:+1032419 | None:intergenic |
| AGGTTGAGGAGGTGCATTAG+GGG | 0.476796 | 6_3:+1032604 | None:intergenic |
| TCGAACAATGAAGAAACATA+TGG | 0.477114 | 6_3:-1034306 | Msa0932780:CDS |
| GGTGGTCCGCCATATCGATA+TGG | 0.479221 | 6_3:+1032080 | None:intergenic |
| GCTATGATGGTTTATGAGGA+AGG | 0.481794 | 6_3:-1031668 | Msa0932780:three_prime_UTR |
| AAGATATTGTTGAGTTTGCA+GGG | 0.482811 | 6_3:+1032670 | None:intergenic |
| CAGCAACAGAGAGGTTGGTT+TGG | 0.486990 | 6_3:-1031744 | Msa0932780:CDS |
| GGATCTCTCTGAGGAACAGT+TGG | 0.488207 | 6_3:+1032518 | None:intergenic |
| GTCACAACTACCTAACGCTT+CGG | 0.489064 | 6_3:-1032039 | Msa0932780:CDS |
| GTATCTGTTGGAAATAATCA+TGG | 0.490366 | 6_3:-1034188 | Msa0932780:CDS |
| GGTTCAGGTTCTCCTGGAGC+TGG | 0.491108 | 6_3:-1031927 | Msa0932780:CDS |
| GTTTCCCTCACATGATCTCT+AGG | 0.493026 | 6_3:+1031852 | None:intergenic |
| AGTGGTGGTTCAGGTTCTCC+TGG | 0.495836 | 6_3:-1031933 | Msa0932780:CDS |
| ATGCAGTAGGTATTGCTTGT+GGG | 0.496173 | 6_3:+1031964 | None:intergenic |
| GAGGTGGCAAACTTTGTTGA+GGG | 0.499915 | 6_3:+1032579 | None:intergenic |
| TGTTGATGCGGAGGTGCCCC+TGG | 0.501541 | 6_3:+1032413 | None:intergenic |
| CCATATCGATATGGCTCAGT+AGG | 0.503012 | 6_3:+1032089 | None:intergenic |
| TAAGTCTGAGAAGGAACATA+AGG | 0.503459 | 6_3:+1032263 | None:intergenic |
| AATGCAAGCTCAGCTACAAC+TGG | 0.504070 | 6_3:-1032795 | Msa0932780:CDS |
| GGTTGAGGAGGTGCATTAGG+GGG | 0.504519 | 6_3:+1032605 | None:intergenic |
| CAACAGCCACCGCATTCATC+CGG | 0.505529 | 6_3:-1032335 | Msa0932780:CDS |
| CTTTGAAGGTTTATGAGGAA+GGG | 0.506268 | 6_3:-1031627 | Msa0932780:three_prime_UTR |
| TCTGTTAACAGTTAGTTATG+TGG | 0.509355 | 6_3:+1031410 | None:intergenic |
| TCCTGGGATTGAACAGGTGA+TGG | 0.510658 | 6_3:+1032488 | None:intergenic |
| AATAATCATGGAATCACTGA+TGG | 0.511625 | 6_3:-1034176 | Msa0932780:CDS |
| GATGAATGCGGTGGCTGTTG+TGG | 0.514588 | 6_3:+1032338 | None:intergenic |
| GAAGGTTGAGGAGGTCCGCT+GGG | 0.515293 | 6_3:+1032206 | None:intergenic |
| AACGCTTCGGCGGCTTCCAG+TGG | 0.517765 | 6_3:-1032026 | Msa0932780:CDS |
| GCGGCTTCCAGTGGTGGAAA+CGG | 0.518066 | 6_3:-1032017 | Msa0932780:CDS |
| ATCATGTGAGGGAAACGGTT+CGG | 0.519055 | 6_3:-1031845 | Msa0932780:CDS |
| GTGGGAGTACGCGGGCAGTA+GGG | 0.525756 | 6_3:+1031982 | None:intergenic |
| TTGAAGCATCAACAGCGCTC+TGG | 0.526502 | 6_3:+1034345 | None:intergenic |
| GTCGACAAAGTTGCCACTAT+GGG | 0.527260 | 6_3:-1031879 | Msa0932780:CDS |
| CAGCAGCCACATCCTCAACC+AGG | 0.527408 | 6_3:-1032431 | Msa0932780:CDS |
| CACAGGATCTGATGTGGCAC+GGG | 0.529555 | 6_3:+1032724 | None:intergenic |
| CCGCTGGGTGGCTGAGATGG+TGG | 0.532280 | 6_3:+1032221 | None:intergenic |
| CGGTGTTCCATAGAACTGTT+GGG | 0.532437 | 6_3:+1032184 | None:intergenic |
| GCTTCGGCGGCTTCCAGTGG+TGG | 0.534650 | 6_3:-1032023 | Msa0932780:CDS |
| AACAGGGGTGCATGATATCA+AGG | 0.535028 | 6_3:-1032831 | Msa0932780:CDS |
| TGATGGGAAATTGAGGCTGT+TGG | 0.535199 | 6_3:-1034159 | Msa0932780:CDS |
| GTTGGAGAATATTCTTTCTG+AGG | 0.538216 | 6_3:-1034141 | Msa0932780:intron |
| CTATGATGGTTTATGAGGAA+GGG | 0.539080 | 6_3:-1031667 | Msa0932780:three_prime_UTR |
| GTTCGGAAGCTGACAGAGAA+TGG | 0.539452 | 6_3:-1031828 | Msa0932780:CDS |
| GCCATCACCTGTTCAATCCC+AGG | 0.542684 | 6_3:-1032489 | Msa0932780:CDS |
| ATATGCAGCAACAGAGAGGT+TGG | 0.542821 | 6_3:-1031749 | Msa0932780:CDS |
| ATTATCAGGAAGTGAACGAA+TGG | 0.545429 | 6_3:+1037356 | None:intergenic |
| CCCATGGAAGATTGCAGTTG+AGG | 0.546082 | 6_3:+1032305 | None:intergenic |
| GAAACCACGGGGATTGATTG+TGG | 0.547752 | 6_3:+1032629 | None:intergenic |
| GATGATTTGAAGGTATCTGT+TGG | 0.550649 | 6_3:-1034200 | Msa0932780:CDS |
| ATTTGGGTTGATCCATCTTG+AGG | 0.552072 | 6_3:-1031358 | Msa0932780:three_prime_UTR |
| TTCTCCTGGAGCTGGTAACA+GGG | 0.552561 | 6_3:-1031919 | Msa0932780:CDS |
| GGCTGTTGTGGAGGTAGATG+AGG | 0.553096 | 6_3:+1032350 | None:intergenic |
| AACAGAGAGGTTGGTTTGGT+AGG | 0.553859 | 6_3:-1031740 | Msa0932780:CDS |
| AACATATACAGGTGCAAACA+GGG | 0.554029 | 6_3:-1032847 | Msa0932780:intron |
| ATGGAAGATTGCAGTTGAGG+TGG | 0.554693 | 6_3:+1032308 | None:intergenic |
| GGAACCCTGTTACCAGCTCC+AGG | 0.557039 | 6_3:+1031915 | None:intergenic |
| GACTGTTTACTACCATATTG+AGG | 0.557194 | 6_3:+1032059 | None:intergenic |
| CCACAATACCAACCTCAAGA+TGG | 0.558214 | 6_3:+1031346 | None:intergenic |
| CGCGGGCAGTAGGGAGCTGT+GGG | 0.561381 | 6_3:+1031991 | None:intergenic |
| TAGAGATCATGTGAGGGAAA+CGG | 0.562181 | 6_3:-1031850 | Msa0932780:CDS |
| GTGGCTGAGATGGTGGCTGG+CGG | 0.563635 | 6_3:+1032228 | None:intergenic |
| CCTACTGCATCTGCAGTAAG+TGG | 0.565690 | 6_3:-1031951 | Msa0932780:CDS |
| TTGGGAGGATAAGTCTGAGA+AGG | 0.566348 | 6_3:+1032254 | None:intergenic |
| GCGGTGTTCCATAGAACTGT+TGG | 0.568740 | 6_3:+1032183 | None:intergenic |
| ACGCGGGCAGTAGGGAGCTG+TGG | 0.569642 | 6_3:+1031990 | None:intergenic |
| GGTGGCTGGCGGAGATTGGG+AGG | 0.569643 | 6_3:+1032239 | None:intergenic |
| TTTGAAGGTTTATGAGGAAG+GGG | 0.571670 | 6_3:-1031626 | Msa0932780:three_prime_UTR |
| TATGATGGTTTATGAGGAAG+GGG | 0.571790 | 6_3:-1031666 | Msa0932780:three_prime_UTR |
| TTATCAGGAAGTGAACGAAT+GGG | 0.573173 | 6_3:+1037357 | None:intergenic |
| GCACAGGATCTGATGTGGCA+CGG | 0.579401 | 6_3:+1032723 | None:intergenic |
| GTATTGCTTGTGGGAGTACG+CGG | 0.579602 | 6_3:+1031973 | None:intergenic |
| TAGAACTGTTGGGAAGGTTG+AGG | 0.579906 | 6_3:+1032194 | None:intergenic |
| GGAGGTGGCAAACTTTGTTG+AGG | 0.579955 | 6_3:+1032578 | None:intergenic |
| ATGGGTTGAAAATCGTAGCT+AGG | 0.582541 | 6_3:+1037375 | None:intergenic |
| CAGATAATGGATCTAAGCCA+TGG | 0.583832 | 6_3:-1037540 | Msa0932780:CDS |
| CCTCAACTGCAATCTTCCAT+GGG | 0.585108 | 6_3:-1032305 | Msa0932780:CDS |
| CTGGATAAGCTTATGAATGA+AGG | 0.585757 | 6_3:-1031780 | Msa0932780:CDS |
| AGCAGCCACATCCTCAACCA+GGG | 0.586197 | 6_3:-1032430 | Msa0932780:CDS |
| ATCTCTAGGGAATCCCATAG+TGG | 0.587762 | 6_3:+1031866 | None:intergenic |
| AGTTGACCTAAATACAGTGC+TGG | 0.587959 | 6_3:-1031799 | Msa0932780:CDS |
| TGATTTGGAAGTTGAGCTGG+AGG | 0.590060 | 6_3:+1032560 | None:intergenic |
| CATCCATAGAACTCTCAAGA+TGG | 0.597918 | 6_3:+1034219 | None:intergenic |
| AACTGTTGGGAAGGTTGAGG+AGG | 0.598242 | 6_3:+1032197 | None:intergenic |
| ATAATCATGGAATCACTGAT+GGG | 0.603214 | 6_3:-1034175 | Msa0932780:CDS |
| TTTGGAAGTTGAGCTGGAGG+TGG | 0.603503 | 6_3:+1032563 | None:intergenic |
| GGCTGAGAGTATTGATGATG+AGG | 0.603851 | 6_3:+1032377 | None:intergenic |
| GGTGGCAAACTTTGTTGAGG+GGG | 0.604162 | 6_3:+1032581 | None:intergenic |
| GGTTGAGGAGGTCCGCTGGG+TGG | 0.604968 | 6_3:+1032209 | None:intergenic |
| TGTGGAAGATTATAAGACGA+AGG | 0.605650 | 6_3:+1032647 | None:intergenic |
| TGCTGATATTGTTGATGCGG+AGG | 0.607900 | 6_3:+1032404 | None:intergenic |
| TTATGTTTGTGCTTAAAACG+TGG | 0.608517 | 6_3:+1037634 | None:intergenic |
| TTCCTCTAGATGGTGACCCA+TGG | 0.609804 | 6_3:+1032289 | None:intergenic |
| GATGCAGTAGGTATTGCTTG+TGG | 0.612043 | 6_3:+1031963 | None:intergenic |
| TTCTAGAAGGTGTTAGTGCG+CGG | 0.613505 | 6_3:-1034268 | Msa0932780:CDS |
| TTTCCCTCACATGATCTCTA+GGG | 0.616191 | 6_3:+1031853 | None:intergenic |
| TTCCATGGGTCACCATCTAG+AGG | 0.616790 | 6_3:-1032291 | Msa0932780:CDS |
| CCACTTACTGCAGATGCAGT+AGG | 0.618868 | 6_3:+1031951 | None:intergenic |
| GTCTGCTGATATTGTTGATG+CGG | 0.620702 | 6_3:+1032401 | None:intergenic |
| TTCTATGGAACACCGCCACA+AGG | 0.620721 | 6_3:-1032176 | Msa0932780:CDS |
| AAGCTTATGAATGAAGGTGG+TGG | 0.622241 | 6_3:-1031774 | Msa0932780:CDS |
| TTGAAGGTTTATGAGGAAGG+GGG | 0.623366 | 6_3:-1031625 | Msa0932780:three_prime_UTR |
| GAACCACCATCGAGTAGACC+TGG | 0.628427 | 6_3:-1032149 | Msa0932780:CDS |
| GAATCACTGATGGGAAATTG+AGG | 0.629747 | 6_3:-1034166 | Msa0932780:CDS |
| GAATGCGGTGGCTGTTGTGG+AGG | 0.630061 | 6_3:+1032341 | None:intergenic |
| GCTGCTGAGTTAAAGGCAGT+TGG | 0.630771 | 6_3:+1032447 | None:intergenic |
| GTTCCATAGAACTGTTGGGA+AGG | 0.631446 | 6_3:+1032188 | None:intergenic |
| GCTGAGAGTATTGATGATGA+GGG | 0.632355 | 6_3:+1032378 | None:intergenic |
| GTCTGAGAAGGAACATAAGG+TGG | 0.637200 | 6_3:+1032266 | None:intergenic |
| ATCTCTCTGAGGAACAGTTG+GGG | 0.642126 | 6_3:+1032520 | None:intergenic |
| CTCGCACCAGGTCTACTCGA+TGG | 0.643974 | 6_3:+1032143 | None:intergenic |
| TAAACCTTCAAAGCAAAACA+AGG | 0.644842 | 6_3:+1031637 | None:intergenic |
| TGGAAGATGATGATCCTCCA+TGG | 0.644949 | 6_3:+1037523 | None:intergenic |
| GTAGCTAGGAACAATATCAT+CGG | 0.645739 | 6_3:+1037389 | None:intergenic |
| GCAGCCACATCCTCAACCAG+GGG | 0.647975 | 6_3:-1032429 | Msa0932780:CDS |
| TGTGGAGGTAGATGAGGCGG+TGG | 0.648997 | 6_3:+1032356 | None:intergenic |
| AACCCAAATCAAAGATAACG+TGG | 0.656028 | 6_3:+1031372 | None:intergenic |
| GAATTGGAATCAGAATTCCA+AGG | 0.657124 | 6_3:+1037312 | None:intergenic |
| ACTGCATCTGCAGTAAGTGG+TGG | 0.658963 | 6_3:-1031948 | Msa0932780:CDS |
| AGGTGGCAAACTTTGTTGAG+GGG | 0.660893 | 6_3:+1032580 | None:intergenic |
| TGTTGTGGAGGTAGATGAGG+CGG | 0.661173 | 6_3:+1032353 | None:intergenic |
| AGATATTGTTGAGTTTGCAG+GGG | 0.662805 | 6_3:+1032671 | None:intergenic |
| GATGGTGGTTCATATCCTTG+TGG | 0.666986 | 6_3:+1032161 | None:intergenic |
| TATTGCTTGTGGGAGTACGC+GGG | 0.670170 | 6_3:+1031974 | None:intergenic |
| GATTCCCTAGAGATCATGTG+AGG | 0.674405 | 6_3:-1031857 | Msa0932780:CDS |
| TGTTTACTACCATATTGAGG+TGG | 0.680049 | 6_3:+1032062 | None:intergenic |
| GCACCAGGTCTACTCGATGG+TGG | 0.681299 | 6_3:+1032146 | None:intergenic |
| CCACCATCTCAGCCACCCAG+CGG | 0.689523 | 6_3:-1032221 | Msa0932780:CDS |
| ATTCCCTAGAGATCATGTGA+GGG | 0.691841 | 6_3:-1031856 | Msa0932780:CDS |
| GGTGGATTTCCGGATGAATG+CGG | 0.691921 | 6_3:+1032326 | None:intergenic |
| GATAAGCTTATGAATGAAGG+TGG | 0.692443 | 6_3:-1031777 | Msa0932780:CDS |
| ACAACTACCTAACGCTTCGG+CGG | 0.699351 | 6_3:-1032036 | Msa0932780:CDS |
| ACTGAGCCATATCGATATGG+CGG | 0.701260 | 6_3:-1032086 | Msa0932780:CDS |
| GGCAAGTATGGATCTCTCTG+AGG | 0.701957 | 6_3:+1032509 | None:intergenic |
| GGATTTCCGGATGAATGCGG+TGG | 0.703500 | 6_3:+1032329 | None:intergenic |
| GGTGGTTCATATCCTTGTGG+CGG | 0.711124 | 6_3:+1032164 | None:intergenic |
| ATGATGGTTTATGAGGAAGG+GGG | 0.718881 | 6_3:-1031665 | Msa0932780:three_prime_UTR |
| TTGCTGCACAGGATCTGATG+TGG | 0.720740 | 6_3:+1032718 | None:intergenic |
| CTGAGAGTATTGATGATGAG+GGG | 0.722939 | 6_3:+1032379 | None:intergenic |
| TCTTCCACAATCAATCCCCG+TGG | 0.724568 | 6_3:-1032633 | Msa0932780:CDS |
| ACATATACAGGTGCAAACAG+GGG | 0.731424 | 6_3:-1032846 | Msa0932780:intron |
| GGTGATATGCAGCAACAGAG+AGG | 0.768274 | 6_3:-1031753 | Msa0932780:CDS |
| ATAATGGATCTAAGCCATGG+AGG | 0.784217 | 6_3:-1037537 | Msa0932780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTATAAATTTATATACTTA+GGG | + | chr6_3:1032512-1032531 | None:intergenic | 10.0% |
| !! | TCTTATAAATTTATATACTT+AGG | + | chr6_3:1032513-1032532 | None:intergenic | 10.0% |
| !!! | TATTTTAAATTTCTTTAATG+GGG | - | chr6_3:1035757-1035776 | Msa0932780:intron | 10.0% |
| !!! | TATTTTTCAATAAATAAAAG+TGG | - | chr6_3:1037592-1037611 | Msa0932780:five_prime_UTR | 10.0% |
| !! | AATAACTATAATCGAAATTA+GGG | + | chr6_3:1031798-1031817 | None:intergenic | 15.0% |
| !! | TAATAACTATAATCGAAATT+AGG | + | chr6_3:1031799-1031818 | None:intergenic | 15.0% |
| !!! | TATTATTTATAAGCTTGTTT+AGG | - | chr6_3:1032180-1032199 | Msa0932780:CDS | 15.0% |
| !!! | AGTTTCTCAATTTTTTTTTT+TGG | + | chr6_3:1032779-1032798 | None:intergenic | 15.0% |
| !!! | TTTTGAGAAAGATTATTTTT+TGG | + | chr6_3:1033890-1033909 | None:intergenic | 15.0% |
| !!! | ATAATTTTTTAAAGTTACCA+AGG | + | chr6_3:1034193-1034212 | None:intergenic | 15.0% |
| !! | AACTTTGCATAATATTAAAA+AGG | + | chr6_3:1034285-1034304 | None:intergenic | 15.0% |
| !! | TTATCTTAGTTATTTGTTTA+TGG | - | chr6_3:1034420-1034439 | Msa0932780:intron | 15.0% |
| !!! | TAGTTTAACCTTAAAATTTT+TGG | - | chr6_3:1035113-1035132 | Msa0932780:intron | 15.0% |
| !!! | TTTAATTTATTATGGGAAAA+TGG | - | chr6_3:1035501-1035520 | Msa0932780:intron | 15.0% |
| !! | TTTGTGTGATTGATTAATTA+TGG | - | chr6_3:1031860-1031879 | Msa0932780:CDS | 20.0% |
| !!! | TTTGATTTGATTACTATGTA+AGG | - | chr6_3:1031964-1031983 | Msa0932780:CDS | 20.0% |
| !!! | TAATTTGAAGTTTATAGCTT+AGG | - | chr6_3:1032007-1032026 | Msa0932780:CDS | 20.0% |
| !! | TCTATTATAAATCATCAATG+AGG | - | chr6_3:1032688-1032707 | Msa0932780:CDS | 20.0% |
| !! | TTGAAATTGATTGTATAAAG+TGG | - | chr6_3:1032933-1032952 | Msa0932780:intron | 20.0% |
| !!! | ATGTGTTTGTTGTATTTAAA+AGG | - | chr6_3:1033277-1033296 | Msa0932780:intron | 20.0% |
| !!! | ATTTAATGCTTCTGAAAATA+TGG | - | chr6_3:1033308-1033327 | Msa0932780:intron | 20.0% |
| !!! | TTTAATGCTTCTGAAAATAT+GGG | - | chr6_3:1033309-1033328 | Msa0932780:intron | 20.0% |
| !! | TTAGTCATATATGTAACTTA+AGG | - | chr6_3:1033567-1033586 | Msa0932780:intron | 20.0% |
| !!! | CTTTTTGTTGATTCAAATAT+TGG | - | chr6_3:1035010-1035029 | Msa0932780:intron | 20.0% |
| !!! | ATTTTAGTTCATTTTTAGCA+TGG | + | chr6_3:1035182-1035201 | None:intergenic | 20.0% |
| !! | TGAACTAAAATTAAAGCTTT+AGG | - | chr6_3:1035191-1035210 | Msa0932780:intron | 20.0% |
| !!! | AAATTAAAGCTTTAGGTATT+AGG | - | chr6_3:1035198-1035217 | Msa0932780:intron | 20.0% |
| !!! | TTGCCACTTTAATTTATTAT+GGG | - | chr6_3:1035494-1035513 | Msa0932780:intron | 20.0% |
| !! | TTTCCCATAATAAATTAAAG+TGG | + | chr6_3:1035500-1035519 | None:intergenic | 20.0% |
| !!! | TATTGAAAATTTTGTGAATG+TGG | - | chr6_3:1035640-1035659 | Msa0932780:intron | 20.0% |
| !!! | ATTATTGTTTTCATCATGAA+AGG | - | chr6_3:1035684-1035703 | Msa0932780:intron | 20.0% |
| !! | ACAAAGGAAAACAAATTATT+TGG | - | chr6_3:1035999-1036018 | Msa0932780:intron | 20.0% |
| !! | AAAACAAATTATTTGGATGA+TGG | - | chr6_3:1036006-1036025 | Msa0932780:intron | 20.0% |
| !! | AAACAAATTATTTGGATGAT+GGG | - | chr6_3:1036007-1036026 | Msa0932780:intron | 20.0% |
| !! | AGAACAAAATGGTAAAAAAA+CGG | + | chr6_3:1037499-1037518 | None:intergenic | 20.0% |
| !!! | TCAATAAATAAAAGTGGATT+TGG | - | chr6_3:1037598-1037617 | Msa0932780:five_prime_UTR | 20.0% |
| ! | TCGTTAATTCATCACAAAAA+TGG | - | chr6_3:1031634-1031653 | Msa0932780:three_prime_UTR | 25.0% |
| ! | TTAATTCATCACAAAAATGG+CGG | - | chr6_3:1031637-1031656 | Msa0932780:three_prime_UTR | 25.0% |
| ! | TAAAGTAGTGAGAATTACTT+TGG | + | chr6_3:1031773-1031792 | None:intergenic | 25.0% |
| !! | TTTGTCTTGTTGTGAAAATT+AGG | - | chr6_3:1031893-1031912 | Msa0932780:CDS | 25.0% |
| !!! | ATTTTGAGAGTTTAGATGAA+TGG | - | chr6_3:1031927-1031946 | Msa0932780:CDS | 25.0% |
| !!! | TGTTTTTGTATAAGCTATCT+TGG | - | chr6_3:1032386-1032405 | Msa0932780:CDS | 25.0% |
| ! | TTGAGATTATCTACTAAGTA+CGG | + | chr6_3:1032470-1032489 | None:intergenic | 25.0% |
| ! | TTATAAATCATCAATGAGGT+TGG | - | chr6_3:1032692-1032711 | Msa0932780:CDS | 25.0% |
| ! | AAAAAAAATTGAGAAACTCG+TGG | - | chr6_3:1032781-1032800 | Msa0932780:CDS | 25.0% |
| ! | CCTTTAAACTACTCAATTAA+TGG | + | chr6_3:1032831-1032850 | None:intergenic | 25.0% |
| ! | CCATTAATTGAGTAGTTTAA+AGG | - | chr6_3:1032828-1032847 | Msa0932780:CDS | 25.0% |
| !! | TTGTCAAATAGTTGATATAG+CGG | - | chr6_3:1032998-1033017 | Msa0932780:intron | 25.0% |
| !!! | AATGAAAAGTGTCTGTTAAA+AGG | - | chr6_3:1033369-1033388 | Msa0932780:intron | 25.0% |
| !! | ACTTTGATGTTGTCATTTAT+AGG | + | chr6_3:1033498-1033517 | None:intergenic | 25.0% |
| ! | CATATATGACTAATTATGAG+TGG | + | chr6_3:1033560-1033579 | None:intergenic | 25.0% |
| ! | CTTTCAATGATACAAAGTAA+AGG | - | chr6_3:1033682-1033701 | Msa0932780:intron | 25.0% |
| !!! | AGAAAGATTATTTTTTGGTC+GGG | + | chr6_3:1033885-1033904 | None:intergenic | 25.0% |
| !!! | GAGAAAGATTATTTTTTGGT+CGG | + | chr6_3:1033886-1033905 | None:intergenic | 25.0% |
| ! | AATCTATACAACAATGGTTA+AGG | - | chr6_3:1034033-1034052 | Msa0932780:intron | 25.0% |
| !! | AATTACAACATTTTGTACCT+TGG | - | chr6_3:1034173-1034192 | Msa0932780:CDS | 25.0% |
| ! | TTGAATAAGTGCATAGTAAA+AGG | - | chr6_3:1034303-1034322 | Msa0932780:CDS | 25.0% |
| !!! | ACATTATTTTTGCTTTGCTT+TGG | - | chr6_3:1034493-1034512 | Msa0932780:intron | 25.0% |
| !!! | CATTATTTTTGCTTTGCTTT+GGG | - | chr6_3:1034494-1034513 | Msa0932780:intron | 25.0% |
| !!! | ATTATTTTTGCTTTGCTTTG+GGG | - | chr6_3:1034495-1034514 | Msa0932780:intron | 25.0% |
| ! | CAGAAATTAATGTTAGAAGT+TGG | + | chr6_3:1034963-1034982 | None:intergenic | 25.0% |
| ! | CAACTTCTAACATTAATTTC+TGG | - | chr6_3:1034961-1034980 | Msa0932780:intron | 25.0% |
| !!! | TTGTTTTGATAAATTAAGCC+TGG | + | chr6_3:1035064-1035083 | None:intergenic | 25.0% |
| !! | ACTGCAAACCAAAAATTTTA+AGG | + | chr6_3:1035124-1035143 | None:intergenic | 25.0% |
| !!! | AAAATTTTTGGTTTGCAGTT+TGG | - | chr6_3:1035125-1035144 | Msa0932780:intron | 25.0% |
| !!! | AAATTTTTGGTTTGCAGTTT+GGG | - | chr6_3:1035126-1035145 | Msa0932780:intron | 25.0% |
| ! | ATACTACTATACTAGATTAG+TGG | - | chr6_3:1035257-1035276 | Msa0932780:intron | 25.0% |
| ! | AAATTAAAGTGGCAACAATA+TGG | + | chr6_3:1035489-1035508 | None:intergenic | 25.0% |
| !!! | GTTGCCACTTTAATTTATTA+TGG | - | chr6_3:1035493-1035512 | Msa0932780:intron | 25.0% |
| ! | TGAAAACAATAATGTAAGAG+TGG | + | chr6_3:1035677-1035696 | None:intergenic | 25.0% |
| ! | AACCTAAGAAAAAGTAACAA+AGG | - | chr6_3:1035874-1035893 | Msa0932780:intron | 25.0% |
| ! | ATGTCAAACAAAAGAGTAAA+AGG | + | chr6_3:1036191-1036210 | None:intergenic | 25.0% |
| ! | TCAAAGAAACAAGAACAAAA+TGG | + | chr6_3:1037510-1037529 | None:intergenic | 25.0% |
| !! | AAACTGTAATGTTTTCTTGT+GGG | - | chr6_3:1037536-1037555 | Msa0932780:CDS | 25.0% |
| TTATGTTTGTGCTTAAAACG+TGG | + | chr6_3:1031429-1031448 | None:intergenic | 30.0% | |
| GTTTATGGACAAACAGATAA+TGG | - | chr6_3:1031507-1031526 | Msa0932780:three_prime_UTR | 30.0% | |
| AACGATGAAGAAGAATTATC+AGG | + | chr6_3:1031721-1031740 | None:intergenic | 30.0% | |
| !! | AGTGAGAATTACTTTGGAAT+TGG | + | chr6_3:1031767-1031786 | None:intergenic | 30.0% |
| ! | ATGGATTAAATTGCGTCATA+AGG | + | chr6_3:1032051-1032070 | None:intergenic | 30.0% |
| ACTAAGTAAAATCAGCTACA+TGG | + | chr6_3:1032070-1032089 | None:intergenic | 30.0% | |
| !! | ATGTAGCTGATTTTACTTAG+TGG | - | chr6_3:1032069-1032088 | Msa0932780:CDS | 30.0% |
| !! | TGTAGCTGATTTTACTTAGT+GGG | - | chr6_3:1032070-1032089 | Msa0932780:CDS | 30.0% |
| ! | TGATTTTACTTAGTGGGATA+TGG | - | chr6_3:1032076-1032095 | Msa0932780:CDS | 30.0% |
| AAAATAAGCTCAATCCAAAC+AGG | - | chr6_3:1032307-1032326 | Msa0932780:CDS | 30.0% | |
| AGTTTACACATAAGCACTAA+GGG | + | chr6_3:1032333-1032352 | None:intergenic | 30.0% | |
| TAGTTTACACATAAGCACTA+AGG | + | chr6_3:1032334-1032353 | None:intergenic | 30.0% | |
| !! | CATAAGTTTTGTGACTGTTT+GGG | + | chr6_3:1032439-1032458 | None:intergenic | 30.0% |
| !! | ACATAAGTTTTGTGACTGTT+TGG | + | chr6_3:1032440-1032459 | None:intergenic | 30.0% |
| TGAGATTATCTACTAAGTAC+GGG | + | chr6_3:1032469-1032488 | None:intergenic | 30.0% | |
| !!! | TCGACGAATTTTTAGAATAG+GGG | + | chr6_3:1032756-1032775 | None:intergenic | 30.0% |
| !!! | GTCGACGAATTTTTAGAATA+GGG | + | chr6_3:1032757-1032776 | None:intergenic | 30.0% |
| TCAAAATACACTTACAAGAG+CGG | + | chr6_3:1032917-1032936 | None:intergenic | 30.0% | |
| TATCAACTATTTGACAACAC+TGG | + | chr6_3:1032995-1033014 | None:intergenic | 30.0% | |
| AACACAGTATTGTCAAATAG+CGG | - | chr6_3:1033078-1033097 | Msa0932780:intron | 30.0% | |
| !!! | CATGCTTTTTTGTTGTTCTT+AGG | - | chr6_3:1033201-1033220 | Msa0932780:intron | 30.0% |
| TTGTTCTTAGGATAATGCTA+GGG | - | chr6_3:1033213-1033232 | Msa0932780:intron | 30.0% | |
| ATATGGGTCTTACTTACTTA+AGG | - | chr6_3:1033325-1033344 | Msa0932780:intron | 30.0% | |
| TATGGGTCTTACTTACTTAA+GGG | - | chr6_3:1033326-1033345 | Msa0932780:intron | 30.0% | |
| GTAGCAAGATAGTAAAACAT+AGG | - | chr6_3:1033451-1033470 | Msa0932780:intron | 30.0% | |
| ! | TAGAGGTAGTATTTCTTTTG+TGG | + | chr6_3:1033627-1033646 | None:intergenic | 30.0% |
| AAAAGGTTCAAACTACGAAT+AGG | - | chr6_3:1033745-1033764 | Msa0932780:intron | 30.0% | |
| AAAGGTTCAAACTACGAATA+GGG | - | chr6_3:1033746-1033765 | Msa0932780:intron | 30.0% | |
| GATTGCAATCTATACAACAA+TGG | - | chr6_3:1034027-1034046 | Msa0932780:intron | 30.0% | |
| AAAGATAAGTTTGTGAGATC+TGG | - | chr6_3:1034341-1034360 | Msa0932780:CDS | 30.0% | |
| ! | AAGTTTCAGCATTGAATGTT+AGG | - | chr6_3:1034364-1034383 | Msa0932780:CDS | 30.0% |
| TTTCATGTATCAGACTAATC+TGG | - | chr6_3:1034526-1034545 | Msa0932780:intron | 30.0% | |
| AATAATATATCGCACCATCT+TGG | - | chr6_3:1034587-1034606 | Msa0932780:intron | 30.0% | |
| TCGAACAATGAAGAAACATA+TGG | - | chr6_3:1034754-1034773 | Msa0932780:intron | 30.0% | |
| ! | AATTTGCATCATGTTCTAGA+AGG | - | chr6_3:1034779-1034798 | Msa0932780:intron | 30.0% |
| GTATCTGTTGGAAATAATCA+TGG | - | chr6_3:1034872-1034891 | Msa0932780:intron | 30.0% | |
| AATAATCATGGAATCACTGA+TGG | - | chr6_3:1034884-1034903 | Msa0932780:intron | 30.0% | |
| ATAATCATGGAATCACTGAT+GGG | - | chr6_3:1034885-1034904 | Msa0932780:intron | 30.0% | |
| !! | CATTAATTTCTGGCAACATT+TGG | - | chr6_3:1034971-1034990 | Msa0932780:intron | 30.0% |
| !! | TTGTCACTTTAGTTAACTCT+GGG | - | chr6_3:1035300-1035319 | Msa0932780:intron | 30.0% |
| ! | TTGACATAACTTTTGCACTA+TGG | - | chr6_3:1035378-1035397 | Msa0932780:intron | 30.0% |
| ACAATATGGCAAACATATCA+AGG | + | chr6_3:1035475-1035494 | None:intergenic | 30.0% | |
| AAAGTGACAACTACACAAAT+GGG | + | chr6_3:1035529-1035548 | None:intergenic | 30.0% | |
| TAAAGTGACAACTACACAAA+TGG | + | chr6_3:1035530-1035549 | None:intergenic | 30.0% | |
| TCTATCGTTTACAACTCATA+TGG | - | chr6_3:1035585-1035604 | Msa0932780:intron | 30.0% | |
| ! | TGAAAATTTTGTGAATGTGG+TGG | - | chr6_3:1035643-1035662 | Msa0932780:intron | 30.0% |
| !!! | AGCCTTTGTTACTTTTTCTT+AGG | + | chr6_3:1035879-1035898 | None:intergenic | 30.0% |
| TATTTAATCGTCAGCCAAAA+AGG | - | chr6_3:1035903-1035922 | Msa0932780:intron | 30.0% | |
| !! | ACACATTCCATTGTTTTGTA+AGG | - | chr6_3:1035927-1035946 | Msa0932780:intron | 30.0% |
| !! | GTCGTTTTCTTCATTCATTT+AGG | + | chr6_3:1035981-1036000 | None:intergenic | 30.0% |
| ATGAATGAAGAAAACGACAA+AGG | - | chr6_3:1035983-1036002 | Msa0932780:intron | 30.0% | |
| CATATGCATAAAGTTCTCTA+TGG | + | chr6_3:1036033-1036052 | None:intergenic | 30.0% | |
| !! | GTGTTTTTACATGCTACTAT+TGG | - | chr6_3:1036092-1036111 | Msa0932780:intron | 30.0% |
| TCAAACAAAAGAGTAAAAGG+AGG | + | chr6_3:1036188-1036207 | None:intergenic | 30.0% | |
| GTTTGACATACAACATATAC+AGG | - | chr6_3:1036202-1036221 | Msa0932780:intron | 30.0% | |
| AAGATATTGTTGAGTTTGCA+GGG | + | chr6_3:1036393-1036412 | None:intergenic | 30.0% | |
| TAAACCTTCAAAGCAAAACA+AGG | + | chr6_3:1037426-1037445 | None:intergenic | 30.0% | |
| !!! | TTTTGCTTTGAAGGTTTATG+AGG | - | chr6_3:1037428-1037447 | Msa0932780:CDS | 30.0% |
| ! | GAAACTGTAATGTTTTCTTG+TGG | - | chr6_3:1037535-1037554 | Msa0932780:CDS | 30.0% |
| AGATCAAGATAGTCATGAAT+TGG | + | chr6_3:1037563-1037582 | None:intergenic | 30.0% | |
| TCTGTTAACAGTTAGTTATG+TGG | + | chr6_3:1037653-1037672 | None:intergenic | 30.0% | |
| CTAACTGTTAACAGATTTGA+TGG | - | chr6_3:1037658-1037677 | Msa0932780:five_prime_UTR | 30.0% | |
| TTTCCACGTTATCTTTGATT+TGG | - | chr6_3:1037685-1037704 | Msa0932780:five_prime_UTR | 30.0% | |
| ! | TTCCACGTTATCTTTGATTT+GGG | - | chr6_3:1037686-1037705 | Msa0932780:five_prime_UTR | 30.0% |
| ! | AAGCTTCTGAGAATTGTTTG+AGG | + | chr6_3:1031461-1031480 | None:intergenic | 35.0% |
| AATGAATACGACGTCGTTTA+TGG | - | chr6_3:1031492-1031511 | Msa0932780:three_prime_UTR | 35.0% | |
| GTAGCTAGGAACAATATCAT+CGG | + | chr6_3:1031674-1031693 | None:intergenic | 35.0% | |
| TTATCAGGAAGTGAACGAAT+GGG | + | chr6_3:1031706-1031725 | None:intergenic | 35.0% | |
| ATTATCAGGAAGTGAACGAA+TGG | + | chr6_3:1031707-1031726 | None:intergenic | 35.0% | |
| GAATTGGAATCAGAATTCCA+AGG | + | chr6_3:1031751-1031770 | None:intergenic | 35.0% | |
| TTACTTAGTGGGATATGGTT+TGG | - | chr6_3:1032081-1032100 | Msa0932780:CDS | 35.0% | |
| GTATAGCATTAGAGTCTGTT+TGG | - | chr6_3:1032112-1032131 | Msa0932780:CDS | 35.0% | |
| TTATATACTTAGGGCCTGTT+TGG | + | chr6_3:1032503-1032522 | None:intergenic | 35.0% | |
| GAGAAACTCCGAATAAATTG+TGG | - | chr6_3:1032577-1032596 | Msa0932780:CDS | 35.0% | |
| AACTCCGAATAAATTGTGGT+TGG | - | chr6_3:1032581-1032600 | Msa0932780:CDS | 35.0% | |
| TCTGCCAACCACAATTTATT+CGG | + | chr6_3:1032588-1032607 | None:intergenic | 35.0% | |
| TAAATCATCAATGAGGTTGG+TGG | - | chr6_3:1032695-1032714 | Msa0932780:CDS | 35.0% | |
| !!! | ACGAATTTTTAGAATAGGGG+AGG | + | chr6_3:1032753-1032772 | None:intergenic | 35.0% |
| !!! | GGTCGACGAATTTTTAGAAT+AGG | + | chr6_3:1032758-1032777 | None:intergenic | 35.0% |
| AAAAATTGAGAAACTCGTGG+AGG | - | chr6_3:1032784-1032803 | Msa0932780:CDS | 35.0% | |
| GGTGCAAAGGTAATCTAAAT+TGG | - | chr6_3:1032805-1032824 | Msa0932780:CDS | 35.0% | |
| ATTAGTTGTCAGTGTCAAAC+TGG | + | chr6_3:1032867-1032886 | None:intergenic | 35.0% | |
| CTAACTTCAATCGTAAAACG+CGG | + | chr6_3:1033159-1033178 | None:intergenic | 35.0% | |
| CGATTGAAGTTAGTGCTTAA+TGG | - | chr6_3:1033166-1033185 | Msa0932780:intron | 35.0% | |
| TTGAAGTTAGTGCTTAATGG+AGG | - | chr6_3:1033169-1033188 | Msa0932780:intron | 35.0% | |
| GTTGTTCTTAGGATAATGCT+AGG | - | chr6_3:1033212-1033231 | Msa0932780:intron | 35.0% | |
| ! | CTTACTTAAGGGCAACTTTT+AGG | - | chr6_3:1033337-1033356 | Msa0932780:intron | 35.0% |
| ! | AGTTCTAACACTGTCAAGAT+CGG | - | chr6_3:1033394-1033413 | Msa0932780:intron | 35.0% |
| TATTCTCAATGATTCTGCCT+AGG | - | chr6_3:1033417-1033436 | Msa0932780:intron | 35.0% | |
| ! | GTATTTCTTTTGTGGACTTC+TGG | + | chr6_3:1033619-1033638 | None:intergenic | 35.0% |
| GAAAGATGTGAACTTCTGAA+TGG | - | chr6_3:1033768-1033787 | Msa0932780:intron | 35.0% | |
| AGAGATGAAAATTTCGAGAC+AGG | - | chr6_3:1033802-1033821 | Msa0932780:intron | 35.0% | |
| GAGATGAAAATTTCGAGACA+GGG | - | chr6_3:1033803-1033822 | Msa0932780:intron | 35.0% | |
| AAGGTCAAACAACACGATAT+AGG | - | chr6_3:1033842-1033861 | Msa0932780:intron | 35.0% | |
| AGGTCAAACAACACGATATA+GGG | - | chr6_3:1033843-1033862 | Msa0932780:intron | 35.0% | |
| CATGCGATTTGACTCATTAA+GGG | - | chr6_3:1033970-1033989 | Msa0932780:intron | 35.0% | |
| TGTAGCGTTGTGTAATACAT+AGG | - | chr6_3:1034557-1034576 | Msa0932780:intron | 35.0% | |
| AAGAAAACCCTAAACCAAGA+TGG | + | chr6_3:1034604-1034623 | None:intergenic | 35.0% | |
| ! | CCATAGTTCTGCACAAAATA+AGG | + | chr6_3:1034650-1034669 | None:intergenic | 35.0% |
| !!! | CCTTATTTTGTGCAGAACTA+TGG | - | chr6_3:1034647-1034666 | Msa0932780:intron | 35.0% |
| GAGTTCTATGGATGATTTGA+AGG | - | chr6_3:1034850-1034869 | Msa0932780:intron | 35.0% | |
| !! | GATGATTTGAAGGTATCTGT+TGG | - | chr6_3:1034860-1034879 | Msa0932780:intron | 35.0% |
| GTTGGAGAATATTCTTTCTG+AGG | - | chr6_3:1034919-1034938 | Msa0932780:intron | 35.0% | |
| !! | GTTGTCACTTTAGTTAACTC+TGG | - | chr6_3:1035299-1035318 | Msa0932780:intron | 35.0% |
| !! | TGTCACTTTAGTTAACTCTG+GGG | - | chr6_3:1035301-1035320 | Msa0932780:intron | 35.0% |
| ! | AATTTTGTGAATGTGGTGGT+TGG | - | chr6_3:1035647-1035666 | Msa0932780:intron | 35.0% |
| ! | CAATGGAATGTGTTCCTTTT+TGG | + | chr6_3:1035920-1035939 | None:intergenic | 35.0% |
| ! | GTGTTGACCTTACAAAACAA+TGG | + | chr6_3:1035937-1035956 | None:intergenic | 35.0% |
| ATTGGTGTATAATTGCGACT+CGG | - | chr6_3:1036110-1036129 | Msa0932780:intron | 35.0% | |
| AACATATACAGGTGCAAACA+GGG | - | chr6_3:1036213-1036232 | Msa0932780:intron | 35.0% | |
| AGATATTGTTGAGTTTGCAG+GGG | + | chr6_3:1036392-1036411 | None:intergenic | 35.0% | |
| GAAGATATTGTTGAGTTTGC+AGG | + | chr6_3:1036394-1036413 | None:intergenic | 35.0% | |
| TGTGGAAGATTATAAGACGA+AGG | + | chr6_3:1036416-1036435 | None:intergenic | 35.0% | |
| !! | TATTGATTTGGAAGTTGAGC+TGG | + | chr6_3:1036506-1036525 | None:intergenic | 35.0% |
| !! | TTGCTGATTTGGAATTTCCT+GGG | + | chr6_3:1036591-1036610 | None:intergenic | 35.0% |
| !! | ATTGCTGATTTGGAATTTCC+TGG | + | chr6_3:1036592-1036611 | None:intergenic | 35.0% |
| TAAGTCTGAGAAGGAACATA+AGG | + | chr6_3:1036800-1036819 | None:intergenic | 35.0% | |
| TCTGGATATGGTACATTATC+TGG | - | chr6_3:1036947-1036966 | Msa0932780:intron | 35.0% | |
| CTGGATATGGTACATTATCT+GGG | - | chr6_3:1036948-1036967 | Msa0932780:intron | 35.0% | |
| TGTTTACTACCATATTGAGG+TGG | + | chr6_3:1037001-1037020 | None:intergenic | 35.0% | |
| GACTGTTTACTACCATATTG+AGG | + | chr6_3:1037004-1037023 | None:intergenic | 35.0% | |
| ! | TTGTCGACTATATCATCAAC+AGG | + | chr6_3:1037169-1037188 | None:intergenic | 35.0% |
| CTGGATAAGCTTATGAATGA+AGG | - | chr6_3:1037280-1037299 | Msa0932780:intron | 35.0% | |
| GATAAGCTTATGAATGAAGG+TGG | - | chr6_3:1037283-1037302 | Msa0932780:intron | 35.0% | |
| TTTCGCTATGATGGTTTATG+AGG | - | chr6_3:1037388-1037407 | Msa0932780:CDS | 35.0% | |
| CTATGATGGTTTATGAGGAA+GGG | - | chr6_3:1037393-1037412 | Msa0932780:CDS | 35.0% | |
| TATGATGGTTTATGAGGAAG+GGG | - | chr6_3:1037394-1037413 | Msa0932780:CDS | 35.0% | |
| !!! | CTATCCTTGTTTTGCTTTGA+AGG | - | chr6_3:1037419-1037438 | Msa0932780:CDS | 35.0% |
| ! | CTTTGAAGGTTTATGAGGAA+GGG | - | chr6_3:1037433-1037452 | Msa0932780:CDS | 35.0% |
| TTTGAAGGTTTATGAGGAAG+GGG | - | chr6_3:1037434-1037453 | Msa0932780:CDS | 35.0% | |
| AACCCAAATCAAAGATAACG+TGG | + | chr6_3:1037691-1037710 | None:intergenic | 35.0% | |
| !! | CAGATAATGGATCTAAGCCA+TGG | - | chr6_3:1031520-1031539 | Msa0932780:three_prime_UTR | 40.0% |
| !! | ATAATGGATCTAAGCCATGG+AGG | - | chr6_3:1031523-1031542 | Msa0932780:three_prime_UTR | 40.0% |
| GTCGATGAAATCGTTGTTGT+TGG | + | chr6_3:1031560-1031579 | None:intergenic | 40.0% | |
| GTTCACGGTTCTTCTTGTTA+AGG | + | chr6_3:1031582-1031601 | None:intergenic | 40.0% | |
| ! | CTTCTTCTTCGTGTTGTTCA+CGG | + | chr6_3:1031597-1031616 | None:intergenic | 40.0% |
| ATTCATCACAAAAATGGCGG+TGG | - | chr6_3:1031640-1031659 | Msa0932780:three_prime_UTR | 40.0% | |
| ! | ATGGGTTGAAAATCGTAGCT+AGG | + | chr6_3:1031688-1031707 | None:intergenic | 40.0% |
| TCAAACAAGCCAATCCAAAC+AGG | - | chr6_3:1032486-1032505 | Msa0932780:CDS | 40.0% | |
| TAAATTGTGGTTGGCAGAGA+TGG | - | chr6_3:1032590-1032609 | Msa0932780:CDS | 40.0% | |
| AATACACTTACAAGAGCGGA+AGG | + | chr6_3:1032913-1032932 | None:intergenic | 40.0% | |
| AAGTTAGTGCTTAATGGAGG+AGG | - | chr6_3:1033172-1033191 | Msa0932780:intron | 40.0% | |
| TTCTTAGGATAATGCTAGGG+AGG | - | chr6_3:1033216-1033235 | Msa0932780:intron | 40.0% | |
| TCTTAGGATAATGCTAGGGA+GGG | - | chr6_3:1033217-1033236 | Msa0932780:intron | 40.0% | |
| ! | TGATTCTGCCTAGGATTAGT+TGG | - | chr6_3:1033426-1033445 | Msa0932780:intron | 40.0% |
| !! | GATTCTGCCTAGGATTAGTT+GGG | - | chr6_3:1033427-1033446 | Msa0932780:intron | 40.0% |
| !! | ATTCTGCCTAGGATTAGTTG+GGG | - | chr6_3:1033428-1033447 | Msa0932780:intron | 40.0% |
| ATGAGTGGTTTCAGATGCTA+TGG | + | chr6_3:1033545-1033564 | None:intergenic | 40.0% | |
| ACAGAAGACATGAACAGAGA+GGG | - | chr6_3:1033709-1033728 | Msa0932780:intron | 40.0% | |
| TGTGAACTTCTGAATGGAGA+AGG | - | chr6_3:1033774-1033793 | Msa0932780:intron | 40.0% | |
| !! | GGGTTTCTGAAGTACAGAAA+AGG | - | chr6_3:1033823-1033842 | Msa0932780:intron | 40.0% |
| GGTCAAACAACACGATATAG+GGG | - | chr6_3:1033844-1033863 | Msa0932780:intron | 40.0% | |
| GCATGCGATTTGACTCATTA+AGG | - | chr6_3:1033969-1033988 | Msa0932780:intron | 40.0% | |
| ATATCGCACCATCTTGGTTT+AGG | - | chr6_3:1034593-1034612 | Msa0932780:intron | 40.0% | |
| TATCGCACCATCTTGGTTTA+GGG | - | chr6_3:1034594-1034613 | Msa0932780:intron | 40.0% | |
| TGTGCAGAACTATGGTTCTT+TGG | - | chr6_3:1034655-1034674 | Msa0932780:intron | 40.0% | |
| ! | GGATTCTTTTGAACCTGCAA+AGG | - | chr6_3:1034676-1034695 | Msa0932780:intron | 40.0% |
| ! | TTTTCTACAGTCACCTTTGC+AGG | + | chr6_3:1034692-1034711 | None:intergenic | 40.0% |
| !! | GTGAGTTCTGGTTTCTACTT+GGG | + | chr6_3:1034822-1034841 | None:intergenic | 40.0% |
| TCACCATCTTGAGAGTTCTA+TGG | - | chr6_3:1034838-1034857 | Msa0932780:intron | 40.0% | |
| CATCCATAGAACTCTCAAGA+TGG | + | chr6_3:1034844-1034863 | None:intergenic | 40.0% | |
| GAATCACTGATGGGAAATTG+AGG | - | chr6_3:1034894-1034913 | Msa0932780:intron | 40.0% | |
| GCAGTTTGGGTAACTATACT+TGG | - | chr6_3:1035139-1035158 | Msa0932780:intron | 40.0% | |
| ! | GTCACTTTAGTTAACTCTGG+GGG | - | chr6_3:1035302-1035321 | Msa0932780:intron | 40.0% |
| ATACAACCTTGATATCCCCT+AGG | + | chr6_3:1035448-1035467 | None:intergenic | 40.0% | |
| TTAGCGTTATCGTTTCTCAC+AGG | + | chr6_3:1036059-1036078 | None:intergenic | 40.0% | |
| ACTACCGTGTCTTCTTATTC+TGG | - | chr6_3:1036161-1036180 | Msa0932780:intron | 40.0% | |
| AGGACCAGAATAAGAAGACA+CGG | + | chr6_3:1036168-1036187 | None:intergenic | 40.0% | |
| CAACATATACAGGTGCAAAC+AGG | - | chr6_3:1036212-1036231 | Msa0932780:intron | 40.0% | |
| ACATATACAGGTGCAAACAG+GGG | - | chr6_3:1036214-1036233 | Msa0932780:intron | 40.0% | |
| !! | GGGATCTGAGAGTATTGATT+TGG | + | chr6_3:1036518-1036537 | None:intergenic | 40.0% |
| GTCTGCTGATATTGTTGATG+CGG | + | chr6_3:1036662-1036681 | None:intergenic | 40.0% | |
| !! | CTGAGAGTATTGATGATGAG+GGG | + | chr6_3:1036684-1036703 | None:intergenic | 40.0% |
| !! | GCTGAGAGTATTGATGATGA+GGG | + | chr6_3:1036685-1036704 | None:intergenic | 40.0% |
| ! | ATGCAGTAGGTATTGCTTGT+GGG | + | chr6_3:1037099-1037118 | None:intergenic | 40.0% |
| ATTCCCTAGAGATCATGTGA+GGG | - | chr6_3:1037204-1037223 | Msa0932780:intron | 40.0% | |
| TTTCCCTCACATGATCTCTA+GGG | + | chr6_3:1037210-1037229 | None:intergenic | 40.0% | |
| TAGAGATCATGTGAGGGAAA+CGG | - | chr6_3:1037210-1037229 | Msa0932780:intron | 40.0% | |
| AGTTGACCTAAATACAGTGC+TGG | - | chr6_3:1037261-1037280 | Msa0932780:intron | 40.0% | |
| GCTTATCCAGCACTGTATTT+AGG | + | chr6_3:1037270-1037289 | None:intergenic | 40.0% | |
| AAGCTTATGAATGAAGGTGG+TGG | - | chr6_3:1037286-1037305 | Msa0932780:intron | 40.0% | |
| TATCGCTTCTTTCGCTATGA+TGG | - | chr6_3:1037379-1037398 | Msa0932780:CDS | 40.0% | |
| GCTATGATGGTTTATGAGGA+AGG | - | chr6_3:1037392-1037411 | Msa0932780:CDS | 40.0% | |
| ATGATGGTTTATGAGGAAGG+GGG | - | chr6_3:1037395-1037414 | Msa0932780:CDS | 40.0% | |
| !! | GCTTTGAAGGTTTATGAGGA+AGG | - | chr6_3:1037432-1037451 | Msa0932780:CDS | 40.0% |
| TTGAAGGTTTATGAGGAAGG+GGG | - | chr6_3:1037435-1037454 | Msa0932780:CDS | 40.0% | |
| TGGAAGATGATGATCCTCCA+TGG | + | chr6_3:1031540-1031559 | None:intergenic | 45.0% | |
| ! | CTTCATCGTTTTCCAGACCT+TGG | - | chr6_3:1031731-1031750 | Msa0932780:exon | 45.0% |
| GGAATCAGAATTCCAAGGTC+TGG | + | chr6_3:1031746-1031765 | None:intergenic | 45.0% | |
| ATAAGCACTAAGGGCCTGTT+TGG | + | chr6_3:1032324-1032343 | None:intergenic | 45.0% | |
| TACTTAGGGCCTGTTTGGAT+TGG | + | chr6_3:1032498-1032517 | None:intergenic | 45.0% | |
| ACCTTTCGCTCACAATAGCT+GGG | - | chr6_3:1032617-1032636 | Msa0932780:CDS | 45.0% | |
| !! | TTCTGCCTAGGATTAGTTGG+GGG | - | chr6_3:1033429-1033448 | Msa0932780:intron | 45.0% |
| !! | TCTTTTGTGGACTTCTGGCT+GGG | + | chr6_3:1033614-1033633 | None:intergenic | 45.0% |
| ! | TTCTTTTGTGGACTTCTGGC+TGG | + | chr6_3:1033615-1033634 | None:intergenic | 45.0% |
| TGAAAGATGACTTCCACGCA+AGG | + | chr6_3:1033668-1033687 | None:intergenic | 45.0% | |
| CACAGAAGACATGAACAGAG+AGG | - | chr6_3:1033708-1033727 | Msa0932780:intron | 45.0% | |
| CAACACGATATAGGGGAACA+AGG | - | chr6_3:1033851-1033870 | Msa0932780:intron | 45.0% | |
| !! | TTCTAGAAGGTGTTAGTGCG+CGG | - | chr6_3:1034792-1034811 | Msa0932780:intron | 45.0% |
| !! | GGTGAGTTCTGGTTTCTACT+TGG | + | chr6_3:1034823-1034842 | None:intergenic | 45.0% |
| ACTCTCAAGATGGTGAGTTC+TGG | + | chr6_3:1034834-1034853 | None:intergenic | 45.0% | |
| TGATGGGAAATTGAGGCTGT+TGG | - | chr6_3:1034901-1034920 | Msa0932780:intron | 45.0% | |
| TGGCACCCATTTGTGTATGT+TGG | - | chr6_3:1035398-1035417 | Msa0932780:intron | 45.0% | |
| ACCCATTTGTGTATGTTGGC+TGG | - | chr6_3:1035402-1035421 | Msa0932780:intron | 45.0% | |
| CCCAGCCAACATACACAAAT+GGG | + | chr6_3:1035406-1035425 | None:intergenic | 45.0% | |
| ! | CCCATTTGTGTATGTTGGCT+GGG | - | chr6_3:1035403-1035422 | Msa0932780:intron | 45.0% |
| TCCCAGCCAACATACACAAA+TGG | + | chr6_3:1035407-1035426 | None:intergenic | 45.0% | |
| ! | GTGTATGTTGGCTGGGAAAA+TGG | - | chr6_3:1035410-1035429 | Msa0932780:intron | 45.0% |
| ! | TATGTTGGCTGGGAAAATGG+TGG | - | chr6_3:1035413-1035432 | Msa0932780:intron | 45.0% |
| TGGGAAAATGGTGGTCATGT+GGG | - | chr6_3:1035422-1035441 | Msa0932780:intron | 45.0% | |
| ! | AACAGGGGTGCATGATATCA+AGG | - | chr6_3:1036229-1036248 | Msa0932780:intron | 45.0% |
| AATGCAAGCTCAGCTACAAC+TGG | - | chr6_3:1036265-1036284 | Msa0932780:intron | 45.0% | |
| !! | ACAGATGAAGTTTGCTGCAC+AGG | + | chr6_3:1036356-1036375 | None:intergenic | 45.0% |
| AGGTGGCAAACTTTGTTGAG+GGG | + | chr6_3:1036483-1036502 | None:intergenic | 45.0% | |
| GAGGTGGCAAACTTTGTTGA+GGG | + | chr6_3:1036484-1036503 | None:intergenic | 45.0% | |
| ! | TGATTTGGAAGTTGAGCTGG+AGG | + | chr6_3:1036503-1036522 | None:intergenic | 45.0% |
| ! | ATCTCTCTGAGGAACAGTTG+GGG | + | chr6_3:1036543-1036562 | None:intergenic | 45.0% |
| ! | GATCTCTCTGAGGAACAGTT+GGG | + | chr6_3:1036544-1036563 | None:intergenic | 45.0% |
| ! | TGAACAGGTGATGGCAAGTA+TGG | + | chr6_3:1036566-1036585 | None:intergenic | 45.0% |
| GGAATTTCCTGGGATTGAAC+AGG | + | chr6_3:1036581-1036600 | None:intergenic | 45.0% | |
| ! | GGCAGTTGGTATTGCTGATT+TGG | + | chr6_3:1036602-1036621 | None:intergenic | 45.0% |
| TGCTGATATTGTTGATGCGG+AGG | + | chr6_3:1036659-1036678 | None:intergenic | 45.0% | |
| !! | GGCTGAGAGTATTGATGATG+AGG | + | chr6_3:1036686-1036705 | None:intergenic | 45.0% |
| ! | TTGCAGTTGAGGTGGATTTC+CGG | + | chr6_3:1036747-1036766 | None:intergenic | 45.0% |
| ATGGAAGATTGCAGTTGAGG+TGG | + | chr6_3:1036755-1036774 | None:intergenic | 45.0% | |
| ACCTCAACTGCAATCTTCCA+TGG | - | chr6_3:1036754-1036773 | Msa0932780:intron | 45.0% | |
| CCTCAACTGCAATCTTCCAT+GGG | - | chr6_3:1036755-1036774 | Msa0932780:intron | 45.0% | |
| CATAAGGTGGTTCCTCTAGA+TGG | + | chr6_3:1036784-1036803 | None:intergenic | 45.0% | |
| GTCTGAGAAGGAACATAAGG+TGG | + | chr6_3:1036797-1036816 | None:intergenic | 45.0% | |
| TTGGGAGGATAAGTCTGAGA+AGG | + | chr6_3:1036809-1036828 | None:intergenic | 45.0% | |
| TAGAACTGTTGGGAAGGTTG+AGG | + | chr6_3:1036869-1036888 | None:intergenic | 45.0% | |
| CAACCTTCCCAACAGTTCTA+TGG | - | chr6_3:1036869-1036888 | Msa0932780:intron | 45.0% | |
| GTTCCATAGAACTGTTGGGA+AGG | + | chr6_3:1036875-1036894 | None:intergenic | 45.0% | |
| CGGTGTTCCATAGAACTGTT+GGG | + | chr6_3:1036879-1036898 | None:intergenic | 45.0% | |
| ! | GATGGTGGTTCATATCCTTG+TGG | + | chr6_3:1036902-1036921 | None:intergenic | 45.0% |
| GCGAGTTACTCTTCTGGATA+TGG | - | chr6_3:1036935-1036954 | Msa0932780:intron | 45.0% | |
| CCATATCGATATGGCTCAGT+AGG | + | chr6_3:1036974-1036993 | None:intergenic | 45.0% | |
| CCTACTGAGCCATATCGATA+TGG | - | chr6_3:1036971-1036990 | Msa0932780:intron | 45.0% | |
| ACTGAGCCATATCGATATGG+CGG | - | chr6_3:1036974-1036993 | Msa0932780:intron | 45.0% | |
| GTCACAACTACCTAACGCTT+CGG | - | chr6_3:1037021-1037040 | Msa0932780:intron | 45.0% | |
| ! | GATGCAGTAGGTATTGCTTG+TGG | + | chr6_3:1037100-1037119 | None:intergenic | 45.0% |
| AGTCGACAAAGTTGCCACTA+TGG | - | chr6_3:1037180-1037199 | Msa0932780:intron | 45.0% | |
| GTCGACAAAGTTGCCACTAT+GGG | - | chr6_3:1037181-1037200 | Msa0932780:intron | 45.0% | |
| ! | ATCTCTAGGGAATCCCATAG+TGG | + | chr6_3:1037197-1037216 | None:intergenic | 45.0% |
| GATTCCCTAGAGATCATGTG+AGG | - | chr6_3:1037203-1037222 | Msa0932780:intron | 45.0% | |
| GTTTCCCTCACATGATCTCT+AGG | + | chr6_3:1037211-1037230 | None:intergenic | 45.0% | |
| ATCATGTGAGGGAAACGGTT+CGG | - | chr6_3:1037215-1037234 | Msa0932780:intron | 45.0% | |
| ATATGCAGCAACAGAGAGGT+TGG | - | chr6_3:1037311-1037330 | Msa0932780:CDS | 45.0% | |
| !! | AACAGAGAGGTTGGTTTGGT+AGG | - | chr6_3:1037320-1037339 | Msa0932780:CDS | 45.0% |
| !!! | ATTATTTTAAATTTCTTTAA+TGG | - | chr6_3:1035755-1035774 | Msa0932780:intron | 5.0% |
| !!! | TTATTTTAAATTTCTTTAAT+GGG | - | chr6_3:1035756-1035775 | Msa0932780:intron | 5.0% |
| GACCTTTCGCTCACAATAGC+TGG | - | chr6_3:1032616-1032635 | Msa0932780:CDS | 50.0% | |
| CCTTTCGCTCACAATAGCTG+GGG | - | chr6_3:1032618-1032637 | Msa0932780:CDS | 50.0% | |
| ! | AGAAACTCGTGGAGGTGCAA+AGG | - | chr6_3:1032792-1032811 | Msa0932780:CDS | 50.0% |
| ATAGCGGCGCTATAGCATAG+CGG | - | chr6_3:1033014-1033033 | Msa0932780:intron | 50.0% | |
| TGCTACCCCCAACTAATCCT+AGG | + | chr6_3:1033437-1033456 | None:intergenic | 50.0% | |
| ! | TTCCACGCAAGGTTCTAGTG+GGG | + | chr6_3:1033657-1033676 | None:intergenic | 50.0% |
| ! | CTTCCACGCAAGGTTCTAGT+GGG | + | chr6_3:1033658-1033677 | None:intergenic | 50.0% |
| ! | ACTTCCACGCAAGGTTCTAG+TGG | + | chr6_3:1033659-1033678 | None:intergenic | 50.0% |
| AGGGTCGAGAGAGATGGAAA+AGG | - | chr6_3:1033728-1033747 | Msa0932780:intron | 50.0% | |
| ! | TTGAAGCATCAACAGCGCTC+TGG | + | chr6_3:1034718-1034737 | None:intergenic | 50.0% |
| ! | TTACACGAGAGCATACACGC+AGG | + | chr6_3:1035041-1035060 | None:intergenic | 50.0% |
| GTGTATGCTCTCGTGTAACC+AGG | - | chr6_3:1035043-1035062 | Msa0932780:intron | 50.0% | |
| CTGGGAAAATGGTGGTCATG+TGG | - | chr6_3:1035421-1035440 | Msa0932780:intron | 50.0% | |
| TTGCTGCACAGGATCTGATG+TGG | + | chr6_3:1036345-1036364 | None:intergenic | 50.0% | |
| TCTTCCACAATCAATCCCCG+TGG | - | chr6_3:1036427-1036446 | Msa0932780:intron | 50.0% | |
| GAAACCACGGGGATTGATTG+TGG | + | chr6_3:1036434-1036453 | None:intergenic | 50.0% | |
| TGCATTAGGGGGAGAAACCA+CGG | + | chr6_3:1036447-1036466 | None:intergenic | 50.0% | |
| ! | AGGTTGAGGAGGTGCATTAG+GGG | + | chr6_3:1036459-1036478 | None:intergenic | 50.0% |
| ! | GAGGTTGAGGAGGTGCATTA+GGG | + | chr6_3:1036460-1036479 | None:intergenic | 50.0% |
| GGTGGCAAACTTTGTTGAGG+GGG | + | chr6_3:1036482-1036501 | None:intergenic | 50.0% | |
| GGAGGTGGCAAACTTTGTTG+AGG | + | chr6_3:1036485-1036504 | None:intergenic | 50.0% | |
| TTTGGAAGTTGAGCTGGAGG+TGG | + | chr6_3:1036500-1036519 | None:intergenic | 50.0% | |
| TCTGAGGAACAGTTGGGGTT+GGG | + | chr6_3:1036538-1036557 | None:intergenic | 50.0% | |
| ! | GGATCTCTCTGAGGAACAGT+TGG | + | chr6_3:1036545-1036564 | None:intergenic | 50.0% |
| GGCAAGTATGGATCTCTCTG+AGG | + | chr6_3:1036554-1036573 | None:intergenic | 50.0% | |
| TCCTGGGATTGAACAGGTGA+TGG | + | chr6_3:1036575-1036594 | None:intergenic | 50.0% | |
| GCTGCTGAGTTAAAGGCAGT+TGG | + | chr6_3:1036616-1036635 | None:intergenic | 50.0% | |
| GGATGTGGCTGCTGAGTTAA+AGG | + | chr6_3:1036623-1036642 | None:intergenic | 50.0% | |
| TGTTGTGGAGGTAGATGAGG+CGG | + | chr6_3:1036710-1036729 | None:intergenic | 50.0% | |
| ! | GGTGGATTTCCGGATGAATG+CGG | + | chr6_3:1036737-1036756 | None:intergenic | 50.0% |
| CCCATGGAAGATTGCAGTTG+AGG | + | chr6_3:1036758-1036777 | None:intergenic | 50.0% | |
| TTCCATGGGTCACCATCTAG+AGG | - | chr6_3:1036769-1036788 | Msa0932780:intron | 50.0% | |
| TTCCTCTAGATGGTGACCCA+TGG | + | chr6_3:1036774-1036793 | None:intergenic | 50.0% | |
| AACTGTTGGGAAGGTTGAGG+AGG | + | chr6_3:1036866-1036885 | None:intergenic | 50.0% | |
| GCGGTGTTCCATAGAACTGT+TGG | + | chr6_3:1036880-1036899 | None:intergenic | 50.0% | |
| TTCTATGGAACACCGCCACA+AGG | - | chr6_3:1036884-1036903 | Msa0932780:intron | 50.0% | |
| GGTGGTTCATATCCTTGTGG+CGG | + | chr6_3:1036899-1036918 | None:intergenic | 50.0% | |
| !! | TATGGCGGACCACCTCAATA+TGG | - | chr6_3:1036989-1037008 | Msa0932780:intron | 50.0% |
| ACAACTACCTAACGCTTCGG+CGG | - | chr6_3:1037024-1037043 | Msa0932780:intron | 50.0% | |
| ! | TATTGCTTGTGGGAGTACGC+GGG | + | chr6_3:1037089-1037108 | None:intergenic | 50.0% |
| ! | GTATTGCTTGTGGGAGTACG+CGG | + | chr6_3:1037090-1037109 | None:intergenic | 50.0% |
| CCACTTACTGCAGATGCAGT+AGG | + | chr6_3:1037112-1037131 | None:intergenic | 50.0% | |
| CCTACTGCATCTGCAGTAAG+TGG | - | chr6_3:1037109-1037128 | Msa0932780:intron | 50.0% | |
| ACTGCATCTGCAGTAAGTGG+TGG | - | chr6_3:1037112-1037131 | Msa0932780:intron | 50.0% | |
| TCTGCAGTAAGTGGTGGTTC+AGG | - | chr6_3:1037118-1037137 | Msa0932780:intron | 50.0% | |
| TTCTCCTGGAGCTGGTAACA+GGG | - | chr6_3:1037141-1037160 | Msa0932780:intron | 50.0% | |
| GTTCGGAAGCTGACAGAGAA+TGG | - | chr6_3:1037232-1037251 | Msa0932780:intron | 50.0% | |
| GGTGATATGCAGCAACAGAG+AGG | - | chr6_3:1037307-1037326 | Msa0932780:intron | 50.0% | |
| ! | CAGCAACAGAGAGGTTGGTT+TGG | - | chr6_3:1037316-1037335 | Msa0932780:CDS | 50.0% |
| CCCCAGCTATTGTGAGCGAA+AGG | + | chr6_3:1032621-1032640 | None:intergenic | 55.0% | |
| GCTCACAATAGCTGGGGTGT+GGG | - | chr6_3:1032624-1032643 | Msa0932780:CDS | 55.0% | |
| ! | CTGGGGTGTGGGTTATACTC+TGG | - | chr6_3:1032635-1032654 | Msa0932780:CDS | 55.0% |
| !! | GTTGGTGGTTCTGACTGACC+TGG | - | chr6_3:1032710-1032729 | Msa0932780:CDS | 55.0% |
| GCACACTCTCAAGCAATGCC+AGG | + | chr6_3:1032731-1032750 | None:intergenic | 55.0% | |
| GGATAATGCTAGGGAGGGTG+AGG | - | chr6_3:1033222-1033241 | Msa0932780:intron | 55.0% | |
| TAGGGAGGGTGAGGCTCATT+GGG | - | chr6_3:1033231-1033250 | Msa0932780:intron | 55.0% | |
| TCTAGTGGGGCTGAAGGTAG+AGG | + | chr6_3:1033644-1033663 | None:intergenic | 55.0% | |
| ! | CAAGGTTCTAGTGGGGCTGA+AGG | + | chr6_3:1033650-1033669 | None:intergenic | 55.0% |
| ACAGAGAGGGTCGAGAGAGA+TGG | - | chr6_3:1033722-1033741 | Msa0932780:intron | 55.0% | |
| AATGGTGGTCATGTGGGCCT+AGG | - | chr6_3:1035428-1035447 | Msa0932780:intron | 55.0% | |
| ATGGTGGTCATGTGGGCCTA+GGG | - | chr6_3:1035429-1035448 | Msa0932780:intron | 55.0% | |
| TGTGGGCCTAGGGGATATCA+AGG | - | chr6_3:1035439-1035458 | Msa0932780:intron | 55.0% | |
| CACAGGATCTGATGTGGCAC+GGG | + | chr6_3:1036339-1036358 | None:intergenic | 55.0% | |
| GCACAGGATCTGATGTGGCA+CGG | + | chr6_3:1036340-1036359 | None:intergenic | 55.0% | |
| CATTAGGGGGAGAAACCACG+GGG | + | chr6_3:1036445-1036464 | None:intergenic | 55.0% | |
| GCATTAGGGGGAGAAACCAC+GGG | + | chr6_3:1036446-1036465 | None:intergenic | 55.0% | |
| ! | GGTTGAGGAGGTGCATTAGG+GGG | + | chr6_3:1036458-1036477 | None:intergenic | 55.0% |
| ! | GGAGGTTGAGGAGGTGCATT+AGG | + | chr6_3:1036461-1036480 | None:intergenic | 55.0% |
| CTTTGTTGAGGGGGAGGTTG+AGG | + | chr6_3:1036473-1036492 | None:intergenic | 55.0% | |
| GGCAAACTTTGTTGAGGGGG+AGG | + | chr6_3:1036479-1036498 | None:intergenic | 55.0% | |
| ! | CTCTGAGGAACAGTTGGGGT+TGG | + | chr6_3:1036539-1036558 | None:intergenic | 55.0% |
| GCCATCACCTGTTCAATCCC+AGG | - | chr6_3:1036571-1036590 | Msa0932780:intron | 55.0% | |
| AGCAGCCACATCCTCAACCA+GGG | - | chr6_3:1036630-1036649 | Msa0932780:intron | 55.0% | |
| GGCTGTTGTGGAGGTAGATG+AGG | + | chr6_3:1036713-1036732 | None:intergenic | 55.0% | |
| GATGAATGCGGTGGCTGTTG+TGG | + | chr6_3:1036725-1036744 | None:intergenic | 55.0% | |
| CAACAGCCACCGCATTCATC+CGG | - | chr6_3:1036725-1036744 | Msa0932780:intron | 55.0% | |
| GGATTTCCGGATGAATGCGG+TGG | + | chr6_3:1036734-1036753 | None:intergenic | 55.0% | |
| GAACCACCATCGAGTAGACC+TGG | - | chr6_3:1036911-1036930 | Msa0932780:intron | 55.0% | |
| CCAGAAGAGTAACTCGCACC+AGG | + | chr6_3:1036932-1036951 | None:intergenic | 55.0% | |
| CCTGGTGCGAGTTACTCTTC+TGG | - | chr6_3:1036929-1036948 | Msa0932780:intron | 55.0% | |
| GGTGGTCCGCCATATCGATA+TGG | + | chr6_3:1036983-1037002 | None:intergenic | 55.0% | |
| TGGGTAACCGTTTCCACCAC+TGG | + | chr6_3:1037053-1037072 | None:intergenic | 55.0% | |
| ! | AGTGGTGGTTCAGGTTCTCC+TGG | - | chr6_3:1037127-1037146 | Msa0932780:intron | 55.0% |
| GTTCTCCTGGAGCTGGTAAC+AGG | - | chr6_3:1037140-1037159 | Msa0932780:intron | 55.0% | |
| TATGAGGAAGGGGGACTTCG+TGG | - | chr6_3:1037444-1037463 | Msa0932780:CDS | 55.0% | |
| ATGAGGAAGGGGGACTTCGT+GGG | - | chr6_3:1037445-1037464 | Msa0932780:CDS | 55.0% | |
| CGCTCACAATAGCTGGGGTG+TGG | - | chr6_3:1032623-1032642 | Msa0932780:CDS | 60.0% | |
| CTAGGGAGGGTGAGGCTCAT+TGG | - | chr6_3:1033230-1033249 | Msa0932780:intron | 60.0% | |
| AGGGAGGGTGAGGCTCATTG+GGG | - | chr6_3:1033232-1033251 | Msa0932780:intron | 60.0% | |
| AGCCCCACTAGAACCTTGCG+TGG | - | chr6_3:1033652-1033671 | Msa0932780:intron | 60.0% | |
| TGGTGGTCATGTGGGCCTAG+GGG | - | chr6_3:1035430-1035449 | Msa0932780:intron | 60.0% | |
| TGTTGAGGGGGAGGTTGAGG+AGG | + | chr6_3:1036470-1036489 | None:intergenic | 60.0% | |
| CAGCAGCCACATCCTCAACC+AGG | - | chr6_3:1036629-1036648 | Msa0932780:intron | 60.0% | |
| GCAGCCACATCCTCAACCAG+GGG | - | chr6_3:1036631-1036650 | Msa0932780:intron | 60.0% | |
| TGTGGAGGTAGATGAGGCGG+TGG | + | chr6_3:1036707-1036726 | None:intergenic | 60.0% | |
| GAATGCGGTGGCTGTTGTGG+AGG | + | chr6_3:1036722-1036741 | None:intergenic | 60.0% | |
| ! | GATGGTGGCTGGCGGAGATT+GGG | + | chr6_3:1036827-1036846 | None:intergenic | 60.0% |
| ! | AGATGGTGGCTGGCGGAGAT+TGG | + | chr6_3:1036828-1036847 | None:intergenic | 60.0% |
| GAAGGTTGAGGAGGTCCGCT+GGG | + | chr6_3:1036857-1036876 | None:intergenic | 60.0% | |
| GCACCAGGTCTACTCGATGG+TGG | + | chr6_3:1036917-1036936 | None:intergenic | 60.0% | |
| CTCGCACCAGGTCTACTCGA+TGG | + | chr6_3:1036920-1036939 | None:intergenic | 60.0% | |
| ! | GCGGCTTCCAGTGGTGGAAA+CGG | - | chr6_3:1037043-1037062 | Msa0932780:intron | 60.0% |
| ! | GGTTCAGGTTCTCCTGGAGC+TGG | - | chr6_3:1037133-1037152 | Msa0932780:intron | 60.0% |
| GGAACCCTGTTACCAGCTCC+AGG | + | chr6_3:1037148-1037167 | None:intergenic | 60.0% | |
| GGGAGGGTGAGGCTCATTGG+GGG | - | chr6_3:1033233-1033252 | Msa0932780:intron | 65.0% | |
| GGTGCCCCTGGTTGAGGATG+TGG | + | chr6_3:1036638-1036657 | None:intergenic | 65.0% | |
| !! | TGTTGATGCGGAGGTGCCCC+TGG | + | chr6_3:1036650-1036669 | None:intergenic | 65.0% |
| ! | GTGGCTGAGATGGTGGCTGG+CGG | + | chr6_3:1036835-1036854 | None:intergenic | 65.0% |
| ! | TGGGTGGCTGAGATGGTGGC+TGG | + | chr6_3:1036838-1036857 | None:intergenic | 65.0% |
| CCACCATCTCAGCCACCCAG+CGG | - | chr6_3:1036839-1036858 | Msa0932780:intron | 65.0% | |
| GGAAGGTTGAGGAGGTCCGC+TGG | + | chr6_3:1036858-1036877 | None:intergenic | 65.0% | |
| ! | CTGGAAGCCGCCGAAGCGTT+AGG | + | chr6_3:1037034-1037053 | None:intergenic | 65.0% |
| AACGCTTCGGCGGCTTCCAG+TGG | - | chr6_3:1037034-1037053 | Msa0932780:intron | 65.0% | |
| ! | GTGGGAGTACGCGGGCAGTA+GGG | + | chr6_3:1037081-1037100 | None:intergenic | 65.0% |
| ! | TGTGGGAGTACGCGGGCAGT+AGG | + | chr6_3:1037082-1037101 | None:intergenic | 65.0% |
| AGGAAGGGGGACTTCGTGGG+TGG | - | chr6_3:1037448-1037467 | Msa0932780:CDS | 65.0% | |
| !! | TGCGGAGGTGCCCCTGGTTG+AGG | + | chr6_3:1036644-1036663 | None:intergenic | 70.0% |
| GGTGGCTGGCGGAGATTGGG+AGG | + | chr6_3:1036824-1036843 | None:intergenic | 70.0% | |
| CCGCTGGGTGGCTGAGATGG+TGG | + | chr6_3:1036842-1036861 | None:intergenic | 70.0% | |
| GGTCCGCTGGGTGGCTGAGA+TGG | + | chr6_3:1036845-1036864 | None:intergenic | 70.0% | |
| GGTTGAGGAGGTCCGCTGGG+TGG | + | chr6_3:1036854-1036873 | None:intergenic | 70.0% | |
| GCTTCGGCGGCTTCCAGTGG+TGG | - | chr6_3:1037037-1037056 | Msa0932780:intron | 70.0% | |
| CGCGGGCAGTAGGGAGCTGT+GGG | + | chr6_3:1037072-1037091 | None:intergenic | 70.0% | |
| ACGCGGGCAGTAGGGAGCTG+TGG | + | chr6_3:1037073-1037092 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 1031358 | 1037724 | 1031358 | ID=Msa0932780;Name=Msa0932780 |
| chr6_3 | mRNA | 1031358 | 1037724 | 1031358 | ID=Msa0932780-mRNA-1;Parent=Msa0932780;Name=Msa0932780-mRNA-1;_AED=0.21;_eAED=0.21;_QI=135|1|1|1|1|1|3|379|560 |
| chr6_3 | exon | 1031358 | 1032858 | 1031358 | ID=Msa0932780-mRNA-1:exon:416;Parent=Msa0932780-mRNA-1 |
| chr6_3 | exon | 1034142 | 1034420 | 1034142 | ID=Msa0932780-mRNA-1:exon:415;Parent=Msa0932780-mRNA-1 |
| chr6_3 | exon | 1037308 | 1037724 | 1037308 | ID=Msa0932780-mRNA-1:exon:414;Parent=Msa0932780-mRNA-1 |
| chr6_3 | five_prime_UTR | 1037590 | 1037724 | 1037590 | ID=Msa0932780-mRNA-1:five_prime_utr;Parent=Msa0932780-mRNA-1 |
| chr6_3 | CDS | 1037308 | 1037589 | 1037308 | ID=Msa0932780-mRNA-1:cds;Parent=Msa0932780-mRNA-1 |
| chr6_3 | CDS | 1034142 | 1034420 | 1034142 | ID=Msa0932780-mRNA-1:cds;Parent=Msa0932780-mRNA-1 |
| chr6_3 | CDS | 1031737 | 1032858 | 1031737 | ID=Msa0932780-mRNA-1:cds;Parent=Msa0932780-mRNA-1 |
| chr6_3 | three_prime_UTR | 1031358 | 1031736 | 1031358 | ID=Msa0932780-mRNA-1:three_prime_utr;Parent=Msa0932780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
