AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1299300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1299300 MtrunA17_Chr4g0059871 91.983 474 29 4 1 466 1 473 0.0 569
Msa1299300 MtrunA17_Chr4g0059861 84.252 127 13 1 1 120 1 127 5.54e-64 216
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1299300 AT5G62640.2 56.087 230 79 7 247 466 297 514 2.75e-34 135
Msa1299300 AT5G62640.1 52.814 231 85 9 247 466 303 520 3.82e-34 134
Msa1299300 AT5G62640.3 51.389 144 30 4 3 112 2 139 7.53e-34 134

Find 204 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTTGTCGTTCAAAGATTT+TGG 0.199739 8_3:-60405980 Msa1299300:three_prime_UTR
TCATCAATGCTTGGTGCTTT+TGG 0.211601 8_3:+60406089 None:intergenic
TGGTCCTCCTCCAAACTTTC+AGG 0.212678 8_3:-60406822 Msa1299300:CDS
CGATTTACAGCTTGCTCTTT+AGG 0.216103 8_3:+60408027 None:intergenic
GGATTTGGAGGCATGGGAGG+TGG 0.226128 8_3:+60408114 None:intergenic
TCCACTACGAACATCTTTAA+TGG 0.239665 8_3:-60405827 Msa1299300:three_prime_UTR
CTGCTTCTACTGTTGTTAAA+AGG 0.257420 8_3:-60406739 Msa1299300:CDS
TTTAGGGGTGGAGGAGGAGG+AGG 0.261669 8_3:+60407994 None:intergenic
ATTTGGAGGCATGGGAGGTG+GGG 0.269646 8_3:+60408116 None:intergenic
GATGACGAGCTCACTGATTC+TGG 0.281785 8_3:+60406116 None:intergenic
TTTGGAGGCATGGGAGGTGG+GGG 0.304569 8_3:+60408117 None:intergenic
CTCATACACAGCTTTCTTAG+AGG 0.305527 8_3:-60406066 Msa1299300:CDS
TGTCTTTGGAGCAGTCATTT+GGG 0.311708 8_3:-60408258 Msa1299300:intron
TCGAAAGGAGCTTCGCAAAA+AGG 0.318695 8_3:-60411031 Msa1299300:CDS
TCTGCACTTGTTCTCCTTTG+AGG 0.322456 8_3:+60408231 None:intergenic
TGATCCTCTTCCTGAAAGTT+TGG 0.326618 8_3:+60406812 None:intergenic
GAGATCCAAGAAATGGTTCC+TGG 0.329177 8_3:-60407100 Msa1299300:CDS
ATTGATTACCGGTAATCCTT+TGG 0.332307 8_3:-60405862 Msa1299300:three_prime_UTR
AGTCGTATGCCACCAAATTC+TGG 0.333649 8_3:-60407172 Msa1299300:CDS
AGGGGTGGAGGAGGAGGAGG+GGG 0.333692 8_3:+60407997 None:intergenic
GACTGAATAGCACCAGAATT+TGG 0.338105 8_3:+60407160 None:intergenic
TTACCTGTGACTGGACTTCC+TGG 0.341623 8_3:-60406944 Msa1299300:CDS
GCTGTTGACACAGGTGGTTT+TGG 0.343382 8_3:+60406179 None:intergenic
GATTTGGAGGCATGGGAGGT+GGG 0.344877 8_3:+60408115 None:intergenic
CAAGAAGCAGATTGAGAACT+TGG 0.347026 8_3:-60410736 Msa1299300:CDS
GGCACCGCAGTAGTGGGATT+TGG 0.348132 8_3:+60408099 None:intergenic
GGCCTCATATCAGGTGGTGG+TGG 0.348897 8_3:+60406971 None:intergenic
ATGTCTTTGGAGCAGTCATT+TGG 0.352853 8_3:-60408259 Msa1299300:intron
GGCCCAGGTGGAGGACCATA+TGG 0.355526 8_3:+60406875 None:intergenic
GCCTCATATCAGGTGGTGGT+GGG 0.358703 8_3:+60406972 None:intergenic
ATCTGCTTCTTGAGTTGATC+AGG 0.363974 8_3:+60410747 None:intergenic
TTGATTACCGGTAATCCTTT+GGG 0.365179 8_3:-60405861 Msa1299300:three_prime_UTR
GAGGCCCAGGAACCATTTCT+TGG 0.374733 8_3:+60407095 None:intergenic
GGTGGTGGCGGCAAAGGAGG+TGG 0.375758 8_3:+60408063 None:intergenic
TCCTTGGAAGATAGATTATC+TGG 0.379238 8_3:+60407910 None:intergenic
CTCATATCAGGTGGTGGTGG+GGG 0.384957 8_3:+60406974 None:intergenic
AATACATCAGGCTGTAAACT+TGG 0.391873 8_3:+60407025 None:intergenic
GGTAATGGAGGCCTCATATC+AGG 0.395163 8_3:+60406962 None:intergenic
AGAAAGAAGGTGAGGGATGT+GGG 0.397715 8_3:-60410786 Msa1299300:intron
CCAGGAGGTGGTGGCGGCAA+AGG 0.398079 8_3:+60408057 None:intergenic
GGTTGTTGTCTTGGAGGAGG+AGG 0.398352 8_3:+60407073 None:intergenic
CCTGGTCAGGCACCTCCTCC+TGG 0.399606 8_3:-60406926 Msa1299300:CDS
GAACCATTTCTTGGATCTCC+TGG 0.400108 8_3:+60407104 None:intergenic
ATTTCTCTCTTCGCCTTCAC+TGG 0.402378 8_3:+60407945 None:intergenic
AAGAAAGAAGGTGAGGGATG+TGG 0.403157 8_3:-60410787 Msa1299300:intron
TCTGGAGTGTGCTGAGCTAA+TGG 0.405498 8_3:+60406716 None:intergenic
GGACAAGGAGGTTGTTGTCT+TGG 0.405852 8_3:+60407064 None:intergenic
TGATTAGCTAAATTGATTAC+CGG 0.407341 8_3:-60405873 Msa1299300:three_prime_UTR
TTAGGGGTGGAGGAGGAGGA+GGG 0.408804 8_3:+60407995 None:intergenic
AAATCCCTTGGCGCACTTGA+TGG 0.410707 8_3:-60406038 Msa1299300:CDS
GCAGCAGATTTAACATATGA+TGG 0.412978 8_3:+60406758 None:intergenic
TCAGGTAGTGGTGGTGGTGG+GGG 0.413863 8_3:+60408189 None:intergenic
CTTGGTGGAGGAGGCGGCGG+AGG 0.416574 8_3:+60407193 None:intergenic
CACTCCAGAACTCACATCTA+TGG 0.418941 8_3:-60406702 Msa1299300:intron
CTTCAGGTAGTGGTGGTGGT+GGG 0.419008 8_3:+60408187 None:intergenic
CTTACCATAGATGTGAGTTC+TGG 0.420790 8_3:+60406698 None:intergenic
CTCATCATTGGAGGAGGCCC+AGG 0.423053 8_3:+60406860 None:intergenic
TGTTGTCTTGGAGGAGGAGG+AGG 0.426012 8_3:+60407076 None:intergenic
TCAAATGCCCAAAGGATTAC+CGG 0.426082 8_3:+60405854 None:intergenic
GCTTCAGGTAGTGGTGGTGG+TGG 0.429141 8_3:+60408186 None:intergenic
CTAAAGAGCAAGCTGTAAAT+CGG 0.431062 8_3:-60408026 Msa1299300:CDS
CTGCATCTGTGCGGGTGAGA+AGG 0.432711 8_3:-60406226 Msa1299300:CDS
TAGGGGTGGAGGAGGAGGAG+GGG 0.434506 8_3:+60407996 None:intergenic
CCCCACCACCACCTGATATG+AGG 0.436179 8_3:-60406973 Msa1299300:CDS
TTCAGGTAGTGGTGGTGGTG+GGG 0.436391 8_3:+60408188 None:intergenic
GGAAGTCCAGTCACAGGTAA+TGG 0.439531 8_3:+60406947 None:intergenic
CTTTCAGGAAGAGGATCATA+TGG 0.439842 8_3:-60406807 Msa1299300:CDS
GCCCAGGTGGAGGACCATAT+GGG 0.444020 8_3:+60406876 None:intergenic
TCTTCGCCTTCACTGGTGCC+AGG 0.447800 8_3:+60407952 None:intergenic
AATCGTGAAACATGTGTCAA+TGG 0.447873 8_3:-60405901 Msa1299300:three_prime_UTR
CCTTCACTGGTGCCAGGTGG+AGG 0.449595 8_3:+60407958 None:intergenic
GGAAGTGGTGGTCTCATCAT+TGG 0.450117 8_3:+60406848 None:intergenic
GGAGGACCAGGAGGTGGTGG+CGG 0.453518 8_3:+60408051 None:intergenic
ATCTTCCAAGGAGCCTGGTC+AGG 0.453723 8_3:-60407899 Msa1299300:intron
GGCACCTCCTCCTGGAATGA+TGG 0.457937 8_3:-60406918 Msa1299300:CDS
GCTGAACTAGCTTCAGGTAG+TGG 0.460116 8_3:+60408177 None:intergenic
CCATCAGCTGAACTAGCTTC+AGG 0.460920 8_3:+60408171 None:intergenic
CCTTTGCCGCCACCACCTCC+TGG 0.462646 8_3:-60408057 Msa1299300:CDS
CCTCATATCAGGTGGTGGTG+GGG 0.464945 8_3:+60406973 None:intergenic
GGCATACGACTTGGTGGAGG+AGG 0.466835 8_3:+60407184 None:intergenic
GCCTACCTGACCAGGCTCCT+TGG 0.466933 8_3:+60407894 None:intergenic
GGTGGAGGACCAGGAGGTGG+TGG 0.469883 8_3:+60408048 None:intergenic
GGAGGCAGTGGCAAAGATGC+AGG 0.471761 8_3:+60408138 None:intergenic
TTAGGTGGAGGACCAGGAGG+TGG 0.473869 8_3:+60408045 None:intergenic
TGCTCTTTAGGTGGAGGACC+AGG 0.474543 8_3:+60408039 None:intergenic
CTTCTCACCCGCACAGATGC+AGG 0.476908 8_3:+60406227 None:intergenic
CTAGGTTCCTGCATCTGTGC+GGG 0.477960 8_3:-60406234 Msa1299300:intron
CAGTCTCAGCCGCCTCCACC+TGG 0.478625 8_3:-60407970 Msa1299300:CDS
CGACTTGGTGGAGGAGGCGG+CGG 0.481431 8_3:+60407190 None:intergenic
TCCTCCAAACTTTCAGGAAG+AGG 0.483764 8_3:-60406816 Msa1299300:CDS
CTTTAATGGATGAACTAAAG+TGG 0.488401 8_3:-60405813 Msa1299300:three_prime_UTR
CAAGGAGGTTGTTGTCTTGG+AGG 0.489583 8_3:+60407067 None:intergenic
GATGGTTTCTGAGGAGGAAG+TGG 0.490804 8_3:+60406776 None:intergenic
TGAAAGTTTGGAGGAGGACC+AGG 0.490881 8_3:+60406824 None:intergenic
TCCTCTTCCTGAAAGTTTGG+AGG 0.490909 8_3:+60406815 None:intergenic
GGAGGAGGACCAGGTGGAAG+TGG 0.492353 8_3:+60406833 None:intergenic
ATACGACTTGGTGGAGGAGG+CGG 0.492519 8_3:+60407187 None:intergenic
AAACCAGGAGATCCAAGAAA+TGG 0.493307 8_3:-60407107 Msa1299300:CDS
TTAGAGGACATGAAATCCCT+TGG 0.494691 8_3:-60406050 Msa1299300:CDS
ATAGTTGGCCCGAGTGTCAC+AGG 0.497969 8_3:+60406146 None:intergenic
CTTGGAGGAGGAGGAGGCCC+AGG 0.501418 8_3:+60407082 None:intergenic
GGAGGTGGTGGCGGCAAAGG+AGG 0.502570 8_3:+60408060 None:intergenic
CCAGGAGGAGGTGCCTGACC+AGG 0.503405 8_3:+60406926 None:intergenic
ATCGTGAAACATGTGTCAAT+GGG 0.504790 8_3:-60405900 Msa1299300:three_prime_UTR
CCCCATATGGTCCTCCACCT+GGG 0.506318 8_3:-60406877 Msa1299300:CDS
ATTGGAGGAGGCCCAGGTGG+AGG 0.506698 8_3:+60406866 None:intergenic
TGTGACTGGACTTCCTGGTC+AGG 0.512104 8_3:-60406939 Msa1299300:CDS
TGATGAGAAAAGGCGGGAGA+AGG 0.516031 8_3:-60408369 Msa1299300:CDS
GGTGGCGGCAAAGGAGGTGG+TGG 0.516548 8_3:+60408066 None:intergenic
GAATTTGGTGGCATACGACT+TGG 0.516978 8_3:+60407175 None:intergenic
GGTGGGAATCGAGATATTCC+AGG 0.517549 8_3:+60406998 None:intergenic
AGGCCTCCATTACCTGTGAC+TGG 0.519780 8_3:-60406953 Msa1299300:CDS
CTTGGGATTAATGAGGGTCC+TGG 0.520058 8_3:+60407043 None:intergenic
ACAGCTTGCTCTTTAGGTGG+AGG 0.520491 8_3:+60408033 None:intergenic
TGCATCTGTGCGGGTGAGAA+GGG 0.520543 8_3:-60406225 Msa1299300:CDS
GACAGGAACATGATGAGAAA+AGG 0.521466 8_3:-60408379 Msa1299300:intron
TCAATGACGAAGACGACTAA+AGG 0.526855 8_3:-60411084 Msa1299300:CDS
CTAGCTTCAGGTAGTGGTGG+TGG 0.527420 8_3:+60408183 None:intergenic
CCTCCACCTGGCACCAGTGA+AGG 0.527423 8_3:-60407958 Msa1299300:CDS
CCCAGGTGGAGGACCATATG+GGG 0.528745 8_3:+60406877 None:intergenic
GTGGGATTTGGAGGCATGGG+AGG 0.528883 8_3:+60408111 None:intergenic
TCACTGGTGCCAGGTGGAGG+CGG 0.529110 8_3:+60407961 None:intergenic
GGAGGTGGTGGTAATGATGC+AGG 0.529142 8_3:+60408078 None:intergenic
GATGAGAAAAGGCGGGAGAA+GGG 0.530329 8_3:-60408368 Msa1299300:CDS
TGATGCAGGCACCGCAGTAG+TGG 0.531793 8_3:+60408092 None:intergenic
TTAACATATGATGGTTTCTG+AGG 0.532835 8_3:+60406767 None:intergenic
GTCATTTGGGGCTTCCTCAA+AGG 0.539043 8_3:-60408245 Msa1299300:CDS
TTTACAGCTTGCTCTTTAGG+TGG 0.539205 8_3:+60408030 None:intergenic
AATCTATCTTCCAAGGAGCC+TGG 0.539750 8_3:-60407904 Msa1299300:CDS
TTTGTTGTGGCAGAGGCTGA+TGG 0.541664 8_3:-60409822 Msa1299300:intron
ATTAATGAGGGTCCTGGACA+AGG 0.542446 8_3:+60407049 None:intergenic
GTCTTTGGAGCAGTCATTTG+GGG 0.545250 8_3:-60408257 Msa1299300:intron
TCTGGTGCTATTCAGTCTGA+TGG 0.547671 8_3:-60407154 Msa1299300:CDS
GGAGGACCAGGTGGAAGTGG+TGG 0.548278 8_3:+60406836 None:intergenic
TTTGGTGGCATACGACTTGG+TGG 0.551552 8_3:+60407178 None:intergenic
TCTTCCTGAAAGTTTGGAGG+AGG 0.551854 8_3:+60406818 None:intergenic
GGAGGTTGTTGTCTTGGAGG+AGG 0.552576 8_3:+60407070 None:intergenic
AGAACAGTCCCTGTGACACT+CGG 0.554265 8_3:-60406155 Msa1299300:CDS
TTTAATGGATGAACTAAAGT+GGG 0.555675 8_3:-60405812 Msa1299300:three_prime_UTR
CTGTAAACTTGGGATTAATG+AGG 0.555892 8_3:+60407036 None:intergenic
ATCTATCCACAAGGTTTCTG+TGG 0.559383 8_3:+60405924 None:intergenic
GTTCTAGCTGTTGACACAGG+TGG 0.560763 8_3:+60406173 None:intergenic
GGGACCATCATTCCAGGAGG+AGG 0.562381 8_3:+60406914 None:intergenic
AGACAACAACCTCCTTGTCC+AGG 0.563064 8_3:-60407061 Msa1299300:CDS
TTTAAGAGATTAGCAAAATG+GGG 0.565009 8_3:-60405948 Msa1299300:three_prime_UTR
ACATATGATGGTTTCTGAGG+AGG 0.565270 8_3:+60406770 None:intergenic
TCCATTAAAGATGTTCGTAG+TGG 0.565775 8_3:+60405826 None:intergenic
ACCGCAGTAGTGGGATTTGG+AGG 0.569597 8_3:+60408102 None:intergenic
TCCTTTCGATAAGCATCGGT+AGG 0.569880 8_3:+60411045 None:intergenic
GCCAGATAATCTATCTTCCA+AGG 0.576178 8_3:-60407911 Msa1299300:CDS
AGTAGTGGGATTTGGAGGCA+TGG 0.576665 8_3:+60408107 None:intergenic
AGATCCAAGAAATGGTTCCT+GGG 0.576940 8_3:-60407099 Msa1299300:CDS
GGCAGAGGCTGATGGTGCAT+TGG 0.578834 8_3:-60409814 Msa1299300:intron
TCAACCATCAAGTGCGCCAA+GGG 0.581937 8_3:+60406034 None:intergenic
CCCTACCGATGCTTATCGAA+AGG 0.583184 8_3:-60411046 Msa1299300:CDS
CTCAACCATCAAGTGCGCCA+AGG 0.583558 8_3:+60406033 None:intergenic
ATACATCAGGCTGTAAACTT+GGG 0.584941 8_3:+60407026 None:intergenic
GGTGGCATACGACTTGGTGG+AGG 0.584968 8_3:+60407181 None:intergenic
GGTGGTCTCATCATTGGAGG+AGG 0.586166 8_3:+60406854 None:intergenic
GATGCAGGCACCGCAGTAGT+GGG 0.588100 8_3:+60408093 None:intergenic
GAAAGAAGGTGAGGGATGTG+GGG 0.589038 8_3:-60410785 Msa1299300:intron
AGTGGTGGTCTCATCATTGG+AGG 0.590662 8_3:+60406851 None:intergenic
ATCATTGGAGGAGGCCCAGG+TGG 0.592389 8_3:+60406863 None:intergenic
GGAACATGATGAGAAAAGGC+GGG 0.595501 8_3:-60408375 Msa1299300:CDS
TTTGTGGGGTCAAATTGTCG+TGG 0.595736 8_3:-60405774 Msa1299300:three_prime_UTR
GGAGGCCTCATATCAGGTGG+TGG 0.598817 8_3:+60406968 None:intergenic
GAAGACGACTAAAGGTGGTA+AGG 0.599895 8_3:-60411076 Msa1299300:CDS
GTGGGGTCAAATTGTCGTGG+AGG 0.604973 8_3:-60405771 Msa1299300:three_prime_UTR
TGTAAACTTGGGATTAATGA+GGG 0.605133 8_3:+60407037 None:intergenic
CCTTTCGATAAGCATCGGTA+GGG 0.605420 8_3:+60411046 None:intergenic
GAACAGTCCCTGTGACACTC+GGG 0.605709 8_3:-60406154 Msa1299300:CDS
ATGAGACCACCACTTCCACC+TGG 0.606838 8_3:-60406842 Msa1299300:CDS
TGACCAGGAAGTCCAGTCAC+AGG 0.609340 8_3:+60406941 None:intergenic
GTAGTGGGATTTGGAGGCAT+GGG 0.609767 8_3:+60408108 None:intergenic
ACTAGGTTCCTGCATCTGTG+CGG 0.610057 8_3:-60406235 Msa1299300:intron
GAACTAGCTTCAGGTAGTGG+TGG 0.615671 8_3:+60408180 None:intergenic
TTAAGAGATTAGCAAAATGG+GGG 0.617687 8_3:-60405947 Msa1299300:three_prime_UTR
TCTTGTCATTAAGAAGCAGA+AGG 0.618323 8_3:-60409745 Msa1299300:intron
TTCACGATTATCTATCCACA+AGG 0.621106 8_3:+60405915 None:intergenic
GTTGAGATCACTGTGAGTGG+TGG 0.623794 8_3:-60406016 Msa1299300:exon
TCTTTAGGTGGAGGACCAGG+AGG 0.623946 8_3:+60408042 None:intergenic
TGAATAGCACCAGAATTTGG+TGG 0.624865 8_3:+60407163 None:intergenic
AGGAACATGATGAGAAAAGG+CGG 0.626419 8_3:-60408376 Msa1299300:CDS
TAAGAACTCTTATGCAAACC+AGG 0.627646 8_3:-60407122 Msa1299300:CDS
TCGCCTTCACTGGTGCCAGG+TGG 0.629646 8_3:+60407955 None:intergenic
CCTGAAGCTAGTTCAGCTGA+TGG 0.633084 8_3:-60408171 Msa1299300:CDS
AAGCTCCTTTCGATAAGCAT+CGG 0.633489 8_3:+60411041 None:intergenic
GTGTATGAGTCATCAATGCT+TGG 0.640196 8_3:+60406080 None:intergenic
CCAGGTGGAGGACCATATGG+GGG 0.641485 8_3:+60406878 None:intergenic
ATGACGAAGACGACTAAAGG+TGG 0.643383 8_3:-60411081 Msa1299300:CDS
AGTCCAGTCACAGGTAATGG+AGG 0.651630 8_3:+60406950 None:intergenic
ATGGTTGAGATCACTGTGAG+TGG 0.655860 8_3:-60406019 Msa1299300:exon
ACTGTTCTAGCTGTTGACAC+AGG 0.659460 8_3:+60406170 None:intergenic
GTGGGAATCGAGATATTCCA+GGG 0.662179 8_3:+60406999 None:intergenic
TGGATTGATCAAATGCCCAA+AGG 0.662369 8_3:+60405846 None:intergenic
AAGTTTGGAGGAGGACCAGG+TGG 0.669156 8_3:+60406827 None:intergenic
TAGTTGGCCCGAGTGTCACA+GGG 0.676300 8_3:+60406147 None:intergenic
TTTGAACGACAACGACTGAG+AGG 0.679544 8_3:+60405988 None:intergenic
AATGGAGGCCTCATATCAGG+TGG 0.683051 8_3:+60406965 None:intergenic
AATGAGGGTCCTGGACAAGG+AGG 0.685690 8_3:+60407052 None:intergenic
TTTCACCTGAACATAACAGG+GGG 0.688198 8_3:+60408341 None:intergenic
GCCTCCAAATCCCACTACTG+CGG 0.689468 8_3:-60408103 Msa1299300:CDS
TGGGAATCGAGATATTCCAG+GGG 0.767776 8_3:+60407000 None:intergenic
GGGAATCGAGATATTCCAGG+GGG 0.784831 8_3:+60407001 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATATTTTTATTTAGCAA+AGG - chr8_3:60408180-60408199 Msa1299300:CDS 10.0%
!! AACTAATAATATGAAGTATA+AGG + chr8_3:60406163-60406182 None:intergenic 15.0%
!! TTTATATGTCATAAACATTA+AGG + chr8_3:60407335-60407354 None:intergenic 15.0%
!! TTCAATATATCTATAATTTC+AGG + chr8_3:60408875-60408894 None:intergenic 15.0%
!! TGTTTAAAAACACTAAAAAT+TGG + chr8_3:60409176-60409195 None:intergenic 15.0%
!! ATAAAAAATATAAAACACGT+GGG + chr8_3:60410999-60411018 None:intergenic 15.0%
!! AATAAAAAATATAAAACACG+TGG + chr8_3:60411000-60411019 None:intergenic 15.0%
!! TGAATTTCAATTATGCTAAT+AGG - chr8_3:60405745-60405764 Msa1299300:three_prime_UTR 20.0%
!! GAATAAAAAAGAAAGAAAGA+AGG - chr8_3:60405876-60405895 Msa1299300:three_prime_UTR 20.0%
!! AAAAATCTGCAAAATTATGT+AGG + chr8_3:60407000-60407019 None:intergenic 20.0%
!!! GTTACGATACATTTTTTTTT+TGG - chr8_3:60407272-60407291 Msa1299300:intron 20.0%
!! TATTGAAACAAACTTGTAAT+GGG - chr8_3:60407997-60408016 Msa1299300:CDS 20.0%
!!! TCATTTTTAGTTAAATGACT+TGG - chr8_3:60408804-60408823 Msa1299300:intron 20.0%
!!! CATTTTTAGTTAAATGACTT+GGG - chr8_3:60408805-60408824 Msa1299300:intron 20.0%
!! ATAGAACATTTAAATGTCTT+TGG + chr8_3:60409099-60409118 None:intergenic 20.0%
!! AGACATTTAAATGTTCTATT+AGG - chr8_3:60409100-60409119 Msa1299300:intron 20.0%
!! AACATTTCAAATTATGTTCA+AGG - chr8_3:60409192-60409211 Msa1299300:intron 20.0%
!! ATACTTAACAAAAGTTTCTT+CGG - chr8_3:60409421-60409440 Msa1299300:intron 20.0%
!! ACTAAATGTGTACTTAATAT+AGG + chr8_3:60410073-60410092 None:intergenic 20.0%
!! TTTGCTAATCTCTTAAAAAA+AGG + chr8_3:60410724-60410743 None:intergenic 20.0%
!!! TTTTTAAGAGATTAGCAAAA+TGG - chr8_3:60410725-60410744 Msa1299300:intron 20.0%
!!! TTTTAAGAGATTAGCAAAAT+GGG - chr8_3:60410726-60410745 Msa1299300:intron 20.0%
!!! TAAACCAAGTTATTTTTTGT+GGG - chr8_3:60410886-60410905 Msa1299300:intron 20.0%
!! GTTCTTAAAGTTCACATTTT+TGG - chr8_3:60405847-60405866 Msa1299300:three_prime_UTR 25.0%
! CCATTAATCTCTAAACAAAA+TGG + chr8_3:60406079-60406098 None:intergenic 25.0%
!!! CCATTTTGTTTAGAGATTAA+TGG - chr8_3:60406076-60406095 Msa1299300:CDS 25.0%
! GTATAAGGTTGCAAAATAAA+TGG + chr8_3:60406148-60406167 None:intergenic 25.0%
! TCAGATTAAATTAGAAGACT+AGG - chr8_3:60406184-60406203 Msa1299300:CDS 25.0%
!! AAAACTAATTTGCAAACAGT+AGG - chr8_3:60406453-60406472 Msa1299300:intron 25.0%
! AATCAAATATAGAACTGCAT+AGG - chr8_3:60406489-60406508 Msa1299300:intron 25.0%
! AATATACTATACACTACAAC+TGG - chr8_3:60406611-60406630 Msa1299300:intron 25.0%
!! TTTTATTCCAAAATGTGGTA+TGG - chr8_3:60406708-60406727 Msa1299300:CDS 25.0%
!! TTCATACATGTCTATTTTGT+TGG - chr8_3:60406959-60406978 Msa1299300:CDS 25.0%
!! TCATACATGTCTATTTTGTT+GGG - chr8_3:60406960-60406979 Msa1299300:CDS 25.0%
! CTCTAAGTAATACTTATCTA+TGG + chr8_3:60407424-60407443 None:intergenic 25.0%
! TTATCAGTGATGTTAAATAG+TGG - chr8_3:60407490-60407509 Msa1299300:intron 25.0%
!!! TAGTGTTGTTGATATTTTCT+TGG - chr8_3:60407924-60407943 Msa1299300:CDS 25.0%
! CTATTGAAACAAACTTGTAA+TGG - chr8_3:60407996-60408015 Msa1299300:CDS 25.0%
! ACATTTAAGTCTTGATTGAT+TGG - chr8_3:60408067-60408086 Msa1299300:CDS 25.0%
!! AAGGAAAAACCAGAATTTTA+TGG - chr8_3:60408093-60408112 Msa1299300:CDS 25.0%
! ACTCTAATTCCATAAAATTC+TGG + chr8_3:60408105-60408124 None:intergenic 25.0%
! AAAATATAAATGCACAACAC+AGG + chr8_3:60408170-60408189 None:intergenic 25.0%
! TATCAGATTTAGATCATCAA+TGG + chr8_3:60408269-60408288 None:intergenic 25.0%
!! GATCTAAATCTGATATCTTT+TGG - chr8_3:60408274-60408293 Msa1299300:intron 25.0%
! TAAACAACACAAAAACAAAC+TGG + chr8_3:60408385-60408404 None:intergenic 25.0%
!! TTGTCTATTTCTTTATGTGT+TGG - chr8_3:60409138-60409157 Msa1299300:intron 25.0%
! TGTGTACTTAATATAGGTAT+GGG + chr8_3:60410067-60410086 None:intergenic 25.0%
! ATGTGTACTTAATATAGGTA+TGG + chr8_3:60410068-60410087 None:intergenic 25.0%
! TATTTAACTGAGACATTACT+CGG + chr8_3:60410307-60410326 None:intergenic 25.0%
! TAATTGCTCTAATATAGTCT+GGG - chr8_3:60410406-60410425 Msa1299300:intron 25.0%
! TTTAAGAGATTAGCAAAATG+GGG - chr8_3:60410727-60410746 Msa1299300:CDS 25.0%
!! TGATTAGCTAAATTGATTAC+CGG - chr8_3:60410802-60410821 Msa1299300:intron 25.0%
!! TTTAATGGATGAACTAAAGT+GGG - chr8_3:60410863-60410882 Msa1299300:intron 25.0%
!!! GTAAACCAAGTTATTTTTTG+TGG - chr8_3:60410885-60410904 Msa1299300:intron 25.0%
!!! AAACCAAGTTATTTTTTGTG+GGG - chr8_3:60410887-60410906 Msa1299300:intron 25.0%
TTCGCAAAAAGGAATTGAAA+AGG - chr8_3:60405655-60405674 Msa1299300:three_prime_UTR 30.0%
TCGCAAAAAGGAATTGAAAA+GGG - chr8_3:60405656-60405675 Msa1299300:three_prime_UTR 30.0%
AAAAAGAAAGAAAGAAGGTG+AGG - chr8_3:60405881-60405900 Msa1299300:three_prime_UTR 30.0%
AAAAGAAAGAAAGAAGGTGA+GGG - chr8_3:60405882-60405901 Msa1299300:three_prime_UTR 30.0%
!!! TAACTAGCTTTTGCATTCTA+AGG - chr8_3:60405997-60406016 Msa1299300:three_prime_UTR 30.0%
!! CTAAACAAAATGGATTGTAC+TGG + chr8_3:60406069-60406088 None:intergenic 30.0%
TTGGAATAAAAGTGGAATAC+TGG + chr8_3:60406699-60406718 None:intergenic 30.0%
!! TCCACTTTTATTCCAAAATG+TGG - chr8_3:60406703-60406722 Msa1299300:CDS 30.0%
!!! ACCACATTTTGGAATAAAAG+TGG + chr8_3:60406707-60406726 None:intergenic 30.0%
TTATGTAGGAGAATACAAAG+TGG + chr8_3:60406986-60407005 None:intergenic 30.0%
GTATATCCTTTACTTCTTCA+GGG + chr8_3:60407207-60407226 None:intergenic 30.0%
AGTATATCCTTTACTTCTTC+AGG + chr8_3:60407208-60407227 None:intergenic 30.0%
TGAAGAAGTAAAGGATATAC+TGG - chr8_3:60407207-60407226 Msa1299300:intron 30.0%
ACTGATAAACTACCAATTAG+AGG + chr8_3:60407478-60407497 None:intergenic 30.0%
TATGGCCAATTTATGAAGAA+AGG - chr8_3:60407551-60407570 Msa1299300:intron 30.0%
!!! GCCTTAAAATGACAGTTTTT+TGG - chr8_3:60407605-60407624 Msa1299300:intron 30.0%
!!! GCCAAAAAACTGTCATTTTA+AGG + chr8_3:60407609-60407628 None:intergenic 30.0%
GCAGTATTATCAATTGCAAA+AGG + chr8_3:60407631-60407650 None:intergenic 30.0%
! TTGCAATTGATAATACTGCT+TGG - chr8_3:60407632-60407651 Msa1299300:intron 30.0%
TATATGTTCTCTTGGTTATG+AGG + chr8_3:60407712-60407731 None:intergenic 30.0%
CAGATTATGATAAACCCAAT+AGG + chr8_3:60407897-60407916 None:intergenic 30.0%
GGTTTATCATAATCTGTATG+TGG - chr8_3:60407901-60407920 Msa1299300:CDS 30.0%
TGTTCACCAAAAAATTCCAT+GGG + chr8_3:60408050-60408069 None:intergenic 30.0%
ATGTTCACCAAAAAATTCCA+TGG + chr8_3:60408051-60408070 None:intergenic 30.0%
AGTCTTGATTGATTGGTAAA+AGG - chr8_3:60408074-60408093 Msa1299300:CDS 30.0%
TCAAATTCAAAGGCTGAATT+TGG + chr8_3:60408209-60408228 None:intergenic 30.0%
! ACTAGAGTGTTCAAATTCAA+AGG + chr8_3:60408219-60408238 None:intergenic 30.0%
! AAATCTGATATCTTTTGGAC+AGG - chr8_3:60408279-60408298 Msa1299300:intron 30.0%
! TTTTTCACCTGAACATAACA+GGG + chr8_3:60408339-60408358 None:intergenic 30.0%
! ATTTTTCACCTGAACATAAC+AGG + chr8_3:60408340-60408359 None:intergenic 30.0%
!! TTGTGTTGTTTACAAATCCT+TGG - chr8_3:60408393-60408412 Msa1299300:intron 30.0%
TCTGACTGTATAAGTATGAA+CGG - chr8_3:60408848-60408867 Msa1299300:intron 30.0%
!!! CGGCATTTTTTTTATCCAAA+AGG - chr8_3:60408920-60408939 Msa1299300:intron 30.0%
! CAAAATTTAGGATGTCAGTA+TGG - chr8_3:60408964-60408983 Msa1299300:intron 30.0%
CATATACAAGCAAGAGATAA+CGG + chr8_3:60409248-60409267 None:intergenic 30.0%
AATGTAATGTGTTCCCATTT+GGG + chr8_3:60409363-60409382 None:intergenic 30.0%
AAATGTAATGTGTTCCCATT+TGG + chr8_3:60409364-60409383 None:intergenic 30.0%
!!! ATTTTTTCTCTCTGAAATGC+AGG - chr8_3:60409451-60409470 Msa1299300:intron 30.0%
TGTAAACTTGGGATTAATGA+GGG + chr8_3:60409641-60409660 None:intergenic 30.0%
TTAACATATGATGGTTTCTG+AGG + chr8_3:60409911-60409930 None:intergenic 30.0%
GTGTACTTAATATAGGTATG+GGG + chr8_3:60410066-60410085 None:intergenic 30.0%
!! GAAAAGTTGGCTTTAATTAG+TGG - chr8_3:60410253-60410272 Msa1299300:intron 30.0%
TGGTCATGAACAAACAATTT+AGG + chr8_3:60410343-60410362 None:intergenic 30.0%
GTAATTGCTCTAATATAGTC+TGG - chr8_3:60410405-60410424 Msa1299300:intron 30.0%
!!! TCTGGGTCATTTTTTTTACT+AGG - chr8_3:60410423-60410442 Msa1299300:intron 30.0%
!!! GATTCTGGTTTTACAATAGT+TGG + chr8_3:60410547-60410566 None:intergenic 30.0%
TTAAGAGATTAGCAAAATGG+GGG - chr8_3:60410728-60410747 Msa1299300:CDS 30.0%
! CTTTAATGGATGAACTAAAG+TGG - chr8_3:60410862-60410881 Msa1299300:intron 30.0%
GATGCTGATGTAAAAAAACG+AGG + chr8_3:60406037-60406056 None:intergenic 35.0%
!! TTGGAAAGATAAGGTATTGC+AGG + chr8_3:60406290-60406309 None:intergenic 35.0%
!! ATAAGCTGGTTTGATGGTTT+GGG + chr8_3:60406329-60406348 None:intergenic 35.0%
! ACTGCATAGGCAAATTTTAG+AGG - chr8_3:60406502-60406521 Msa1299300:intron 35.0%
TATACACTACAACTGGAGAT+GGG - chr8_3:60406618-60406637 Msa1299300:intron 35.0%
AAAAGTGGAATACTGGTGTA+GGG + chr8_3:60406692-60406711 None:intergenic 35.0%
TAAAAGTGGAATACTGGTGT+AGG + chr8_3:60406693-60406712 None:intergenic 35.0%
! GTTATGTCCATACCACATTT+TGG + chr8_3:60406718-60406737 None:intergenic 35.0%
ATACTACTTAATGCATGCCA+GGG + chr8_3:60406757-60406776 None:intergenic 35.0%
TATACTACTTAATGCATGCC+AGG + chr8_3:60406758-60406777 None:intergenic 35.0%
! AATGTGCAGTGGTTTTCAAT+AGG + chr8_3:60406832-60406851 None:intergenic 35.0%
TCTTGTCATTAAGAAGCAGA+AGG - chr8_3:60406930-60406949 Msa1299300:CDS 35.0%
ATAGTCTCATCGAGAGAAAA+CGG + chr8_3:60407118-60407137 None:intergenic 35.0%
AGGCAATGATAAACCTAAGA+GGG + chr8_3:60407458-60407477 None:intergenic 35.0%
GGTTTATCATTGCCTCTAAT+TGG - chr8_3:60407463-60407482 Msa1299300:intron 35.0%
TCTTCATAAATTGGCCATAG+CGG + chr8_3:60407550-60407569 None:intergenic 35.0%
TGCTGCCTTTCTTCATAAAT+TGG + chr8_3:60407559-60407578 None:intergenic 35.0%
TGATCAGAGTATGACAGAAA+CGG - chr8_3:60407656-60407675 Msa1299300:intron 35.0%
GATTTACCATTCTTCTACGT+AGG - chr8_3:60407843-60407862 Msa1299300:intron 35.0%
TTTCTTGGTCCAATGTAAAC+AGG - chr8_3:60407939-60407958 Msa1299300:CDS 35.0%
TTACAGCCTATGACTACAAA+CGG + chr8_3:60407969-60407988 None:intergenic 35.0%
! TTTTCACCTGAACATAACAG+GGG + chr8_3:60408338-60408357 None:intergenic 35.0%
TACAAATCCTTGGATGTCTT+TGG - chr8_3:60408403-60408422 Msa1299300:intron 35.0%
CTAAAGAGCAAGCTGTAAAT+CGG - chr8_3:60408649-60408668 Msa1299300:intron 35.0%
TCCTTGGAAGATAGATTATC+TGG + chr8_3:60408768-60408787 None:intergenic 35.0%
GGGGATTCTGATCAAAATTT+AGG - chr8_3:60408952-60408971 Msa1299300:intron 35.0%
GTATATGACTATCTGATCTC+AGG - chr8_3:60409261-60409280 Msa1299300:intron 35.0%
CATGAATAGACAAAAACCTG+TGG + chr8_3:60409298-60409317 None:intergenic 35.0%
GTCTATTCATGCTTCATAGA+TGG - chr8_3:60409307-60409326 Msa1299300:intron 35.0%
TAAGAACTCTTATGCAAACC+AGG - chr8_3:60409553-60409572 Msa1299300:intron 35.0%
CTGTAAACTTGGGATTAATG+AGG + chr8_3:60409642-60409661 None:intergenic 35.0%
ATACATCAGGCTGTAAACTT+GGG + chr8_3:60409652-60409671 None:intergenic 35.0%
AATACATCAGGCTGTAAACT+TGG + chr8_3:60409653-60409672 None:intergenic 35.0%
GCAGCAGATTTAACATATGA+TGG + chr8_3:60409920-60409939 None:intergenic 35.0%
CTGCTTCTACTGTTGTTAAA+AGG - chr8_3:60409936-60409955 Msa1299300:intron 35.0%
!! TTGCTTTTATTTCAGCTCTC+AGG - chr8_3:60410030-60410049 Msa1299300:intron 35.0%
TTGTTCATGACCACTTAAAG+TGG - chr8_3:60410350-60410369 Msa1299300:intron 35.0%
!! ACAAATGATGCCACTTTAAG+TGG + chr8_3:60410363-60410382 None:intergenic 35.0%
!!! TGGTTTTGTTTTGGTCATTG+CGG + chr8_3:60410479-60410498 None:intergenic 35.0%
!!! AGGTGGTTTTGGTTTTGTTT+TGG + chr8_3:60410488-60410507 None:intergenic 35.0%
! TCGTTGTCGTTCAAAGATTT+TGG - chr8_3:60410695-60410714 Msa1299300:intron 35.0%
TTCACGATTATCTATCCACA+AGG + chr8_3:60410763-60410782 None:intergenic 35.0%
AATCGTGAAACATGTGTCAA+TGG - chr8_3:60410774-60410793 Msa1299300:CDS 35.0%
ATCGTGAAACATGTGTCAAT+GGG - chr8_3:60410775-60410794 Msa1299300:CDS 35.0%
ATTGATTACCGGTAATCCTT+TGG - chr8_3:60410813-60410832 Msa1299300:intron 35.0%
TTGATTACCGGTAATCCTTT+GGG - chr8_3:60410814-60410833 Msa1299300:intron 35.0%
TCCACTACGAACATCTTTAA+TGG - chr8_3:60410848-60410867 Msa1299300:intron 35.0%
TCCATTAAAGATGTTCGTAG+TGG + chr8_3:60410852-60410871 None:intergenic 35.0%
TGACCCCACAAAAAATAACT+TGG + chr8_3:60410893-60410912 None:intergenic 35.0%
AAGCTCCTTTCGATAAGCAT+CGG + chr8_3:60405637-60405656 None:intergenic 40.0%
!! ATCTGCTTCTTGAGTTGATC+AGG + chr8_3:60405931-60405950 None:intergenic 40.0%
CAAGAAGCAGATTGAGAACT+TGG - chr8_3:60405939-60405958 Msa1299300:three_prime_UTR 40.0%
GCAAAATAAATGGCTCGCAT+TGG + chr8_3:60406138-60406157 None:intergenic 40.0%
ATGTGACACATGTGAATAGC+TGG - chr8_3:60406239-60406258 Msa1299300:intron 40.0%
AGCTGGTTAGAAATCTCACT+AGG - chr8_3:60406256-60406275 Msa1299300:intron 40.0%
ACAAAGGGGTTGGAAAGATA+AGG + chr8_3:60406299-60406318 None:intergenic 40.0%
!! TAAGCTGGTTTGATGGTTTG+GGG + chr8_3:60406328-60406347 None:intergenic 40.0%
!! GATAAGCTGGTTTGATGGTT+TGG + chr8_3:60406330-60406349 None:intergenic 40.0%
CATACGTCTAGTAGTTGTCA+TGG - chr8_3:60406397-60406416 Msa1299300:intron 40.0%
CTATACACTACAACTGGAGA+TGG - chr8_3:60406617-60406636 Msa1299300:intron 40.0%
! CAATCCTTTAGTTGTTTCCC+TGG - chr8_3:60406737-60406756 Msa1299300:CDS 40.0%
! AGAGAAAACGGCTTGGATAT+TGG + chr8_3:60407106-60407125 None:intergenic 40.0%
! GTTTTCTCTCGATGAGACTA+TGG - chr8_3:60407117-60407136 Msa1299300:CDS 40.0%
! AAACCCTCTGCAAAGTTGAT+AGG + chr8_3:60407163-60407182 None:intergenic 40.0%
GGATGGGAAAGAAGTTTGAT+AGG + chr8_3:60407186-60407205 None:intergenic 40.0%
TCCTTTACTTCTTCAGGGAT+GGG + chr8_3:60407202-60407221 None:intergenic 40.0%
ATCCTTTACTTCTTCAGGGA+TGG + chr8_3:60407203-60407222 None:intergenic 40.0%
GGATATACTGGTGCGTTTAT+AGG - chr8_3:60407219-60407238 Msa1299300:intron 40.0%
! ACCATGAGTAACTTGCAGAT+TGG - chr8_3:60407380-60407399 Msa1299300:intron 40.0%
ACCAATCTGCAAGTTACTCA+TGG + chr8_3:60407384-60407403 None:intergenic 40.0%
GTATTACTTAGAGTAGCCGA+AGG - chr8_3:60407431-60407450 Msa1299300:intron 40.0%
ATAAACCTAAGAGGGACCTT+CGG + chr8_3:60407450-60407469 None:intergenic 40.0%
GAGGCAATGATAAACCTAAG+AGG + chr8_3:60407459-60407478 None:intergenic 40.0%
TATGAAGAAAGGCAGCACTA+TGG - chr8_3:60407562-60407581 Msa1299300:intron 40.0%
!! ATGGCGTTTTATGGTGGAAA+TGG - chr8_3:60407581-60407600 Msa1299300:intron 40.0%
!! TGGCGTTTTATGGTGGAAAT+GGG - chr8_3:60407582-60407601 Msa1299300:intron 40.0%
GATCAGAGTATGACAGAAAC+GGG - chr8_3:60407657-60407676 Msa1299300:intron 40.0%
GTGCTTGGTATATGTTCTCT+TGG + chr8_3:60407720-60407739 None:intergenic 40.0%
TTAGCATCAGAACATGTGCT+TGG + chr8_3:60407735-60407754 None:intergenic 40.0%
AACTTGCCTACGTAGAAGAA+TGG + chr8_3:60407852-60407871 None:intergenic 40.0%
AACGGACAACCTGTTTACAT+TGG + chr8_3:60407951-60407970 None:intergenic 40.0%
! TTTGACTTTAGACAGACCCA+TGG - chr8_3:60408031-60408050 Msa1299300:CDS 40.0%
!!! GACAGACCCATGGAATTTTT+TGG - chr8_3:60408041-60408060 Msa1299300:CDS 40.0%
GACAGGAACATGATGAGAAA+AGG - chr8_3:60408296-60408315 Msa1299300:intron 40.0%
AGGAACATGATGAGAAAAGG+CGG - chr8_3:60408299-60408318 Msa1299300:intron 40.0%
TTTCACCTGAACATAACAGG+GGG + chr8_3:60408337-60408356 None:intergenic 40.0%
!! ATGTCTTTGGAGCAGTCATT+TGG - chr8_3:60408416-60408435 Msa1299300:intron 40.0%
!! TGTCTTTGGAGCAGTCATTT+GGG - chr8_3:60408417-60408436 Msa1299300:intron 40.0%
! TTTACAGCTTGCTCTTTAGG+TGG + chr8_3:60408648-60408667 None:intergenic 40.0%
! CGATTTACAGCTTGCTCTTT+AGG + chr8_3:60408651-60408670 None:intergenic 40.0%
GCCAGATAATCTATCTTCCA+AGG - chr8_3:60408764-60408783 Msa1299300:intron 40.0%
!!! AGAAGCATTGACGCTTTTGT+CGG - chr8_3:60408900-60408919 Msa1299300:intron 40.0%
TTATCCAAAAGGAGTCAGTG+CGG - chr8_3:60408931-60408950 Msa1299300:intron 40.0%
! ATTTAGGATGTCAGTATGGC+AGG - chr8_3:60408968-60408987 Msa1299300:intron 40.0%
! TTTAGGATGTCAGTATGGCA+GGG - chr8_3:60408969-60408988 Msa1299300:intron 40.0%
! GGCTTCTAGCTGAAAAAAGA+TGG - chr8_3:60409213-60409232 Msa1299300:intron 40.0%
AGACAAAAACCTGTGGCATA+TGG + chr8_3:60409291-60409310 None:intergenic 40.0%
TGAATAGCACCAGAATTTGG+TGG + chr8_3:60409515-60409534 None:intergenic 40.0%
GACTGAATAGCACCAGAATT+TGG + chr8_3:60409518-60409537 None:intergenic 40.0%
AAACCAGGAGATCCAAGAAA+TGG - chr8_3:60409568-60409587 Msa1299300:intron 40.0%
AGATCCAAGAAATGGTTCCT+GGG - chr8_3:60409576-60409595 Msa1299300:intron 40.0%
ATATGGGGGCCTTAAGATTA+GGG + chr8_3:60409786-60409805 None:intergenic 40.0%
TGATCCTCTTCCTGAAAGTT+TGG + chr8_3:60409866-60409885 None:intergenic 40.0%
CTTTCAGGAAGAGGATCATA+TGG - chr8_3:60409868-60409887 Msa1299300:intron 40.0%
! ACATATGATGGTTTCTGAGG+AGG + chr8_3:60409908-60409927 None:intergenic 40.0%
CTTACCATAGATGTGAGTTC+TGG + chr8_3:60409980-60409999 None:intergenic 40.0%
CAGACCACTGAATAAGCTAA+TGG - chr8_3:60410161-60410180 Msa1299300:intron 40.0%
! GTTGCCATTAGCTTATTCAG+TGG + chr8_3:60410168-60410187 None:intergenic 40.0%
! ACTCTAGTGTCGAGAAAAGT+TGG - chr8_3:60410240-60410259 Msa1299300:intron 40.0%
GTGTATGAGTCATCAATGCT+TGG + chr8_3:60410598-60410617 None:intergenic 40.0%
CTCATACACAGCTTTCTTAG+AGG - chr8_3:60410609-60410628 Msa1299300:intron 40.0%
TTAGAGGACATGAAATCCCT+TGG - chr8_3:60410625-60410644 Msa1299300:intron 40.0%
ATCTATCCACAAGGTTTCTG+TGG + chr8_3:60410754-60410773 None:intergenic 40.0%
TCAAATGCCCAAAGGATTAC+CGG + chr8_3:60410824-60410843 None:intergenic 40.0%
TGGATTGATCAAATGCCCAA+AGG + chr8_3:60410832-60410851 None:intergenic 40.0%
ATGACGAAGACGACTAAAGG+TGG - chr8_3:60405594-60405613 Msa1299300:three_prime_UTR 45.0%
GAAGACGACTAAAGGTGGTA+AGG - chr8_3:60405599-60405618 Msa1299300:three_prime_UTR 45.0%
!! CCTTTCGATAAGCATCGGTA+GGG + chr8_3:60405632-60405651 None:intergenic 45.0%
!! TCCTTTCGATAAGCATCGGT+AGG + chr8_3:60405633-60405652 None:intergenic 45.0%
TCGAAAGGAGCTTCGCAAAA+AGG - chr8_3:60405644-60405663 Msa1299300:three_prime_UTR 45.0%
AAGAAAGAAGGTGAGGGATG+TGG - chr8_3:60405888-60405907 Msa1299300:three_prime_UTR 45.0%
AGAAAGAAGGTGAGGGATGT+GGG - chr8_3:60405889-60405908 Msa1299300:three_prime_UTR 45.0%
!! GGAGTGATAAGCTGGTTTGA+TGG + chr8_3:60406335-60406354 None:intergenic 45.0%
! AGCATAGTGGAGTGATAAGC+TGG + chr8_3:60406343-60406362 None:intergenic 45.0%
AGCTTATCACTCCACTATGC+TGG - chr8_3:60406342-60406361 Msa1299300:intron 45.0%
! TACACCTTTTGCCAGCATAG+TGG + chr8_3:60406356-60406375 None:intergenic 45.0%
! TATGCTGGCAAAAGGTGTAC+TGG - chr8_3:60406357-60406376 Msa1299300:intron 45.0%
! ATGCTGGCAAAAGGTGTACT+GGG - chr8_3:60406358-60406377 Msa1299300:intron 45.0%
GGAATACTGGTGTAGGGATT+AGG + chr8_3:60406686-60406705 None:intergenic 45.0%
CATGCCAGGGAAACAACTAA+AGG + chr8_3:60406744-60406763 None:intergenic 45.0%
CCACAACAAACAATGTGCAG+TGG + chr8_3:60406843-60406862 None:intergenic 45.0%
! CCACTGCACATTGTTTGTTG+TGG - chr8_3:60406840-60406859 Msa1299300:CDS 45.0%
!! CACATTGTTTGTTGTGGCAG+AGG - chr8_3:60406846-60406865 Msa1299300:CDS 45.0%
AAACAGTGAGAACTGAGCTC+TGG - chr8_3:60407070-60407089 Msa1299300:CDS 45.0%
!! CTGCAAAGTTGATAGGCTCA+GGG + chr8_3:60407156-60407175 None:intergenic 45.0%
!! TCTGCAAAGTTGATAGGCTC+AGG + chr8_3:60407157-60407176 None:intergenic 45.0%
TGAGCCTATCAACTTTGCAG+AGG - chr8_3:60407156-60407175 Msa1299300:CDS 45.0%
GAGCCTATCAACTTTGCAGA+GGG - chr8_3:60407157-60407176 Msa1299300:CDS 45.0%
TCCCATCCCTGAAGAAGTAA+AGG - chr8_3:60407198-60407217 Msa1299300:CDS 45.0%
ATAGTGGCCATGTCAGATTG+CGG - chr8_3:60407506-60407525 Msa1299300:intron 45.0%
CATAAATTGGCCATAGCGGT+TGG + chr8_3:60407546-60407565 None:intergenic 45.0%
! AGCACTATGGCGTTTTATGG+TGG - chr8_3:60407575-60407594 Msa1299300:intron 45.0%
!! GGCGTTTTATGGTGGAAATG+GGG - chr8_3:60407583-60407602 Msa1299300:intron 45.0%
GCAAGTTCCACTAACAGTAG+CGG - chr8_3:60407865-60407884 Msa1299300:intron 45.0%
! TTCCACTAACAGTAGCGGAA+GGG - chr8_3:60407870-60407889 Msa1299300:intron 45.0%
GGTTGTCCGTTTGTAGTCAT+AGG - chr8_3:60407960-60407979 Msa1299300:CDS 45.0%
GGAACATGATGAGAAAAGGC+GGG - chr8_3:60408300-60408319 Msa1299300:intron 45.0%
!! GTCTTTGGAGCAGTCATTTG+GGG - chr8_3:60408418-60408437 Msa1299300:intron 45.0%
TCTGCACTTGTTCTCCTTTG+AGG + chr8_3:60408447-60408466 None:intergenic 45.0%
ATTTCTCTCTTCGCCTTCAC+TGG + chr8_3:60408733-60408752 None:intergenic 45.0%
AATCTATCTTCCAAGGAGCC+TGG - chr8_3:60408771-60408790 Msa1299300:intron 45.0%
AAAAATGAGCCTACCTGACC+AGG + chr8_3:60408792-60408811 None:intergenic 45.0%
TATCCAAAAGGAGTCAGTGC+GGG - chr8_3:60408932-60408951 Msa1299300:intron 45.0%
TCAGGTATACCATATGCCAC+AGG - chr8_3:60409279-60409298 Msa1299300:intron 45.0%
TGGCTACTAGACACTTGTCA+TGG - chr8_3:60409327-60409346 Msa1299300:intron 45.0%
ATGGTTCCCAAATGCCCAAA+TGG - chr8_3:60409346-60409365 Msa1299300:intron 45.0%
TGGTTCCCAAATGCCCAAAT+GGG - chr8_3:60409347-60409366 Msa1299300:intron 45.0%
GTGTTCCCATTTGGGCATTT+GGG + chr8_3:60409355-60409374 None:intergenic 45.0%
TGTGTTCCCATTTGGGCATT+TGG + chr8_3:60409356-60409375 None:intergenic 45.0%
! GAATTTGGTGGCATACGACT+TGG + chr8_3:60409503-60409522 None:intergenic 45.0%
AGTCGTATGCCACCAAATTC+TGG - chr8_3:60409503-60409522 Msa1299300:intron 45.0%
!! TCTGGTGCTATTCAGTCTGA+TGG - chr8_3:60409521-60409540 Msa1299300:intron 45.0%
GAACCATTTCTTGGATCTCC+TGG + chr8_3:60409574-60409593 None:intergenic 45.0%
GAGATCCAAGAAATGGTTCC+TGG - chr8_3:60409575-60409594 Msa1299300:intron 45.0%
ATTAATGAGGGTCCTGGACA+AGG + chr8_3:60409629-60409648 None:intergenic 45.0%
TGGGAATCGAGATATTCCAG+GGG + chr8_3:60409678-60409697 None:intergenic 45.0%
GTGGGAATCGAGATATTCCA+GGG + chr8_3:60409679-60409698 None:intergenic 45.0%
TGATGGTCCCCCTAATCTTA+AGG - chr8_3:60409774-60409793 Msa1299300:CDS 45.0%
TATGGGGGCCTTAAGATTAG+GGG + chr8_3:60409785-60409804 None:intergenic 45.0%
CATATGGGGGCCTTAAGATT+AGG + chr8_3:60409787-60409806 None:intergenic 45.0%
CTAATCTTAAGGCCCCCATA+TGG - chr8_3:60409785-60409804 Msa1299300:CDS 45.0%
TCTTCCTGAAAGTTTGGAGG+AGG + chr8_3:60409860-60409879 None:intergenic 45.0%
TCCTCCAAACTTTCAGGAAG+AGG - chr8_3:60409859-60409878 Msa1299300:intron 45.0%
TCCTCTTCCTGAAAGTTTGG+AGG + chr8_3:60409863-60409882 None:intergenic 45.0%
CACTCCAGAACTCACATCTA+TGG - chr8_3:60409973-60409992 Msa1299300:intron 45.0%
AGTTTATGCCCATGTAGCAG+TGG + chr8_3:60410223-60410242 None:intergenic 45.0%
! ACTGTTCTAGCTGTTGACAC+AGG + chr8_3:60410508-60410527 None:intergenic 45.0%
ATGGTTGAGATCACTGTGAG+TGG - chr8_3:60410656-60410675 Msa1299300:intron 45.0%
TTTGAACGACAACGACTGAG+AGG + chr8_3:60410690-60410709 None:intergenic 45.0%
TTTGTGGGGTCAAATTGTCG+TGG - chr8_3:60410901-60410920 Msa1299300:intron 45.0%
CCCTACCGATGCTTATCGAA+AGG - chr8_3:60405629-60405648 Msa1299300:three_prime_UTR 50.0%
GAAAGAAGGTGAGGGATGTG+GGG - chr8_3:60405890-60405909 Msa1299300:three_prime_UTR 50.0%
AGGCTGATGTGACAGAACAG+TGG - chr8_3:60406204-60406223 Msa1299300:CDS 50.0%
GTTTGGGGAGAGACACAAAG+GGG + chr8_3:60406313-60406332 None:intergenic 50.0%
GGTTTGGGGAGAGACACAAA+GGG + chr8_3:60406314-60406333 None:intergenic 50.0%
! TGGTTTGGGGAGAGACACAA+AGG + chr8_3:60406315-60406334 None:intergenic 50.0%
CACTCCACTATGCTGGCAAA+AGG - chr8_3:60406349-60406368 Msa1299300:intron 50.0%
AACTGGAGATGGGTCAGTCT+AGG - chr8_3:60406628-60406647 Msa1299300:intron 50.0%
! TTTGTTGTGGCAGAGGCTGA+TGG - chr8_3:60406853-60406872 Msa1299300:CDS 50.0%
CTCATCGAGAGAAAACGGCT+TGG + chr8_3:60407113-60407132 None:intergenic 50.0%
! GGATTTTTCGCCAACCGCTA+TGG - chr8_3:60407533-60407552 Msa1299300:intron 50.0%
! GGCAGCACTATGGCGTTTTA+TGG - chr8_3:60407572-60407591 Msa1299300:intron 50.0%
! GTTCCACTAACAGTAGCGGA+AGG - chr8_3:60407869-60407888 Msa1299300:intron 50.0%
! AGTAGCGGAAGGGACCTATT+GGG - chr8_3:60407880-60407899 Msa1299300:intron 50.0%
TGATGAGAAAAGGCGGGAGA+AGG - chr8_3:60408306-60408325 Msa1299300:intron 50.0%
GATGAGAAAAGGCGGGAGAA+GGG - chr8_3:60408307-60408326 Msa1299300:intron 50.0%
GACTGCTCCAAAGACATCCA+AGG + chr8_3:60408413-60408432 None:intergenic 50.0%
! GTCATTTGGGGCTTCCTCAA+AGG - chr8_3:60408430-60408449 Msa1299300:intron 50.0%
! GAACTAGCTTCAGGTAGTGG+TGG + chr8_3:60408498-60408517 None:intergenic 50.0%
! GCTGAACTAGCTTCAGGTAG+TGG + chr8_3:60408501-60408520 None:intergenic 50.0%
! CCATCAGCTGAACTAGCTTC+AGG + chr8_3:60408507-60408526 None:intergenic 50.0%
CCTGAAGCTAGTTCAGCTGA+TGG - chr8_3:60408504-60408523 Msa1299300:intron 50.0%
! GTAGTGGGATTTGGAGGCAT+GGG + chr8_3:60408570-60408589 None:intergenic 50.0%
! AGTAGTGGGATTTGGAGGCA+TGG + chr8_3:60408571-60408590 None:intergenic 50.0%
! ACAGCTTGCTCTTTAGGTGG+AGG + chr8_3:60408645-60408664 None:intergenic 50.0%
!!! TGAGACTGTTTTAGGGGTGG+AGG + chr8_3:60408693-60408712 None:intergenic 50.0%
! AGGCGGCTGAGACTGTTTTA+GGG + chr8_3:60408700-60408719 None:intergenic 50.0%
ATCCAAAAGGAGTCAGTGCG+GGG - chr8_3:60408933-60408952 Msa1299300:intron 50.0%
! TTTGGTGGCATACGACTTGG+TGG + chr8_3:60409500-60409519 None:intergenic 50.0%
CAAGGAGGTTGTTGTCTTGG+AGG + chr8_3:60409611-60409630 None:intergenic 50.0%
GGACAAGGAGGTTGTTGTCT+TGG + chr8_3:60409614-60409633 None:intergenic 50.0%
AGACAACAACCTCCTTGTCC+AGG - chr8_3:60409614-60409633 Msa1299300:intron 50.0%
CTTGGGATTAATGAGGGTCC+TGG + chr8_3:60409635-60409654 None:intergenic 50.0%
ATTCCAGGGGGCAATACATC+AGG + chr8_3:60409665-60409684 None:intergenic 50.0%
GGGAATCGAGATATTCCAGG+GGG + chr8_3:60409677-60409696 None:intergenic 50.0%
GGTGGGAATCGAGATATTCC+AGG + chr8_3:60409680-60409699 None:intergenic 50.0%
AATGGAGGCCTCATATCAGG+TGG + chr8_3:60409713-60409732 None:intergenic 50.0%
!! GGTAATGGAGGCCTCATATC+AGG + chr8_3:60409716-60409735 None:intergenic 50.0%
! AGTCCAGTCACAGGTAATGG+AGG + chr8_3:60409728-60409747 None:intergenic 50.0%
GGAAGTCCAGTCACAGGTAA+TGG + chr8_3:60409731-60409750 None:intergenic 50.0%
TTACCTGTGACTGGACTTCC+TGG - chr8_3:60409731-60409750 Msa1299300:intron 50.0%
ATTAGGGGGACCATCATTCC+AGG + chr8_3:60409770-60409789 None:intergenic 50.0%
ATGGGGGCCTTAAGATTAGG+GGG + chr8_3:60409784-60409803 None:intergenic 50.0%
AGTGGTGGTCTCATCATTGG+AGG + chr8_3:60409827-60409846 None:intergenic 50.0%
GGAAGTGGTGGTCTCATCAT+TGG + chr8_3:60409830-60409849 None:intergenic 50.0%
TGAAAGTTTGGAGGAGGACC+AGG + chr8_3:60409854-60409873 None:intergenic 50.0%
TGGTCCTCCTCCAAACTTTC+AGG - chr8_3:60409853-60409872 Msa1299300:intron 50.0%
! GATGGTTTCTGAGGAGGAAG+TGG + chr8_3:60409902-60409921 None:intergenic 50.0%
! TCTGGAGTGTGCTGAGCTAA+TGG + chr8_3:60409962-60409981 None:intergenic 50.0%
TCCAGTGATCCACTGCTACA+TGG - chr8_3:60410211-60410230 Msa1299300:intron 50.0%
CCAGTGATCCACTGCTACAT+GGG - chr8_3:60410212-60410231 Msa1299300:intron 50.0%
ACTAGGTTCCTGCATCTGTG+CGG - chr8_3:60410440-60410459 Msa1299300:intron 50.0%
! GCTGTTGACACAGGTGGTTT+TGG + chr8_3:60410499-60410518 None:intergenic 50.0%
! GTTCTAGCTGTTGACACAGG+TGG + chr8_3:60410505-60410524 None:intergenic 50.0%
AGAACAGTCCCTGTGACACT+CGG - chr8_3:60410520-60410539 Msa1299300:intron 50.0%
!! GATGACGAGCTCACTGATTC+TGG + chr8_3:60410562-60410581 None:intergenic 50.0%
AAATCCCTTGGCGCACTTGA+TGG - chr8_3:60410637-60410656 Msa1299300:intron 50.0%
TCAACCATCAAGTGCGCCAA+GGG + chr8_3:60410644-60410663 None:intergenic 50.0%
GTTGAGATCACTGTGAGTGG+TGG - chr8_3:60410659-60410678 Msa1299300:intron 50.0%
AGTAGCCGAAGGTCCCTCTT+AGG - chr8_3:60407442-60407461 Msa1299300:intron 55.0%
TCCACCACCGCAATCTGACA+TGG + chr8_3:60407516-60407535 None:intergenic 55.0%
GTCCCTTCCGCTACTGTTAG+TGG + chr8_3:60407875-60407894 None:intergenic 55.0%
! CAGTAGCGGAAGGGACCTAT+TGG - chr8_3:60407879-60407898 Msa1299300:intron 55.0%
GTGAGCCCCCTGTTATGTTC+AGG - chr8_3:60408329-60408348 Msa1299300:intron 55.0%
!! TTCAGGTAGTGGTGGTGGTG+GGG + chr8_3:60408490-60408509 None:intergenic 55.0%
!! CTTCAGGTAGTGGTGGTGGT+GGG + chr8_3:60408491-60408510 None:intergenic 55.0%
! CTAGCTTCAGGTAGTGGTGG+TGG + chr8_3:60408495-60408514 None:intergenic 55.0%
! ATTTGGAGGCATGGGAGGTG+GGG + chr8_3:60408562-60408581 None:intergenic 55.0%
! GATTTGGAGGCATGGGAGGT+GGG + chr8_3:60408563-60408582 None:intergenic 55.0%
GCCTCCAAATCCCACTACTG+CGG - chr8_3:60408572-60408591 Msa1299300:intron 55.0%
! ACCGCAGTAGTGGGATTTGG+AGG + chr8_3:60408576-60408595 None:intergenic 55.0%
! GGAGGTGGTGGTAATGATGC+AGG + chr8_3:60408600-60408619 None:intergenic 55.0%
TCTTTAGGTGGAGGACCAGG+AGG + chr8_3:60408636-60408655 None:intergenic 55.0%
TGCTCTTTAGGTGGAGGACC+AGG + chr8_3:60408639-60408658 None:intergenic 55.0%
!!! TGTTTTAGGGGTGGAGGAGG+AGG + chr8_3:60408687-60408706 None:intergenic 55.0%
!!! GACTGTTTTAGGGGTGGAGG+AGG + chr8_3:60408690-60408709 None:intergenic 55.0%
!!! GGCTGAGACTGTTTTAGGGG+TGG + chr8_3:60408696-60408715 None:intergenic 55.0%
!! GGCGGCTGAGACTGTTTTAG+GGG + chr8_3:60408699-60408718 None:intergenic 55.0%
! GAGGCGGCTGAGACTGTTTT+AGG + chr8_3:60408701-60408720 None:intergenic 55.0%
ATCTTCCAAGGAGCCTGGTC+AGG - chr8_3:60408776-60408795 Msa1299300:intron 55.0%
!!! ATCCCCGCACTGACTCCTTT+TGG + chr8_3:60408938-60408957 None:intergenic 55.0%
!! ATACGACTTGGTGGAGGAGG+CGG + chr8_3:60409491-60409510 None:intergenic 55.0%
GAGGCCCAGGAACCATTTCT+TGG + chr8_3:60409583-60409602 None:intergenic 55.0%
TGTTGTCTTGGAGGAGGAGG+AGG + chr8_3:60409602-60409621 None:intergenic 55.0%
GGTTGTTGTCTTGGAGGAGG+AGG + chr8_3:60409605-60409624 None:intergenic 55.0%
GGAGGTTGTTGTCTTGGAGG+AGG + chr8_3:60409608-60409627 None:intergenic 55.0%
AATGAGGGTCCTGGACAAGG+AGG + chr8_3:60409626-60409645 None:intergenic 55.0%
!! CTCATATCAGGTGGTGGTGG+GGG + chr8_3:60409704-60409723 None:intergenic 55.0%
! CCTCATATCAGGTGGTGGTG+GGG + chr8_3:60409705-60409724 None:intergenic 55.0%
! GCCTCATATCAGGTGGTGGT+GGG + chr8_3:60409706-60409725 None:intergenic 55.0%
AGGCCTCCATTACCTGTGAC+TGG - chr8_3:60409722-60409741 Msa1299300:intron 55.0%
TGACCAGGAAGTCCAGTCAC+AGG + chr8_3:60409737-60409756 None:intergenic 55.0%
TGTGACTGGACTTCCTGGTC+AGG - chr8_3:60409736-60409755 Msa1299300:intron 55.0%
GGTGGTCTCATCATTGGAGG+AGG + chr8_3:60409824-60409843 None:intergenic 55.0%
ATGAGACCACCACTTCCACC+TGG - chr8_3:60409833-60409852 Msa1299300:intron 55.0%
AAGTTTGGAGGAGGACCAGG+TGG + chr8_3:60409851-60409870 None:intergenic 55.0%
CCCATGTAGCAGTGGATCAC+TGG + chr8_3:60410215-60410234 None:intergenic 55.0%
CTAGGTTCCTGCATCTGTGC+GGG - chr8_3:60410441-60410460 Msa1299300:intron 55.0%
TGCATCTGTGCGGGTGAGAA+GGG - chr8_3:60410450-60410469 Msa1299300:intron 55.0%
GAACAGTCCCTGTGACACTC+GGG - chr8_3:60410521-60410540 Msa1299300:intron 55.0%
TAGTTGGCCCGAGTGTCACA+GGG + chr8_3:60410531-60410550 None:intergenic 55.0%
ATAGTTGGCCCGAGTGTCAC+AGG + chr8_3:60410532-60410551 None:intergenic 55.0%
CTCAACCATCAAGTGCGCCA+AGG + chr8_3:60410645-60410664 None:intergenic 55.0%
GTGGGGTCAAATTGTCGTGG+AGG - chr8_3:60410904-60410923 Msa1299300:intron 55.0%
GGGGAGAGACACAAAGGGGT+TGG + chr8_3:60406309-60406328 None:intergenic 60.0%
! GGCAGAGGCTGATGGTGCAT+TGG - chr8_3:60406861-60406880 Msa1299300:CDS 60.0%
GTGGCCATGTCAGATTGCGG+TGG - chr8_3:60407509-60407528 Msa1299300:intron 60.0%
GCCATGTCAGATTGCGGTGG+TGG - chr8_3:60407512-60407531 Msa1299300:intron 60.0%
!! TCAGGTAGTGGTGGTGGTGG+GGG + chr8_3:60408489-60408508 None:intergenic 60.0%
!! GCTTCAGGTAGTGGTGGTGG+TGG + chr8_3:60408492-60408511 None:intergenic 60.0%
GGAGGCAGTGGCAAAGATGC+AGG + chr8_3:60408540-60408559 None:intergenic 60.0%
! TTTGGAGGCATGGGAGGTGG+GGG + chr8_3:60408561-60408580 None:intergenic 60.0%
! GGATTTGGAGGCATGGGAGG+TGG + chr8_3:60408564-60408583 None:intergenic 60.0%
! GTGGGATTTGGAGGCATGGG+AGG + chr8_3:60408567-60408586 None:intergenic 60.0%
! GGCACCGCAGTAGTGGGATT+TGG + chr8_3:60408579-60408598 None:intergenic 60.0%
! GATGCAGGCACCGCAGTAGT+GGG + chr8_3:60408585-60408604 None:intergenic 60.0%
! TGATGCAGGCACCGCAGTAG+TGG + chr8_3:60408586-60408605 None:intergenic 60.0%
TTAGGTGGAGGACCAGGAGG+TGG + chr8_3:60408633-60408652 None:intergenic 60.0%
TTAGGGGTGGAGGAGGAGGA+GGG + chr8_3:60408683-60408702 None:intergenic 60.0%
TTTAGGGGTGGAGGAGGAGG+AGG + chr8_3:60408684-60408703 None:intergenic 60.0%
TCTTCGCCTTCACTGGTGCC+AGG + chr8_3:60408726-60408745 None:intergenic 60.0%
TCCAAGGAGCCTGGTCAGGT+AGG - chr8_3:60408780-60408799 Msa1299300:intron 60.0%
!! GGCATACGACTTGGTGGAGG+AGG + chr8_3:60409494-60409513 None:intergenic 60.0%
!! GGTGGCATACGACTTGGTGG+AGG + chr8_3:60409497-60409516 None:intergenic 60.0%
CAGCCTGATGTATTGCCCCC+TGG - chr8_3:60409659-60409678 Msa1299300:intron 60.0%
!! ATATCAGGTGGTGGTGGGGG+CGG + chr8_3:60409701-60409720 None:intergenic 60.0%
CCCCACCACCACCTGATATG+AGG - chr8_3:60409702-60409721 Msa1299300:intron 60.0%
! GGCCTCATATCAGGTGGTGG+TGG + chr8_3:60409707-60409726 None:intergenic 60.0%
GGAGGCCTCATATCAGGTGG+TGG + chr8_3:60409710-60409729 None:intergenic 60.0%
GGCACCTCCTCCTGGAATGA+TGG - chr8_3:60409757-60409776 Msa1299300:CDS 60.0%
GGGACCATCATTCCAGGAGG+AGG + chr8_3:60409764-60409783 None:intergenic 60.0%
AGGGGGACCATCATTCCAGG+AGG + chr8_3:60409767-60409786 None:intergenic 60.0%
CCAGGTGGAGGACCATATGG+GGG + chr8_3:60409800-60409819 None:intergenic 60.0%
CCCAGGTGGAGGACCATATG+GGG + chr8_3:60409801-60409820 None:intergenic 60.0%
CCCCATATGGTCCTCCACCT+GGG - chr8_3:60409798-60409817 Msa1299300:CDS 60.0%
GCCCAGGTGGAGGACCATAT+GGG + chr8_3:60409802-60409821 None:intergenic 60.0%
ATCATTGGAGGAGGCCCAGG+TGG + chr8_3:60409815-60409834 None:intergenic 60.0%
CTCATCATTGGAGGAGGCCC+AGG + chr8_3:60409818-60409837 None:intergenic 60.0%
CTTCTCACCCGCACAGATGC+AGG + chr8_3:60410451-60410470 None:intergenic 60.0%
CTGCATCTGTGCGGGTGAGA+AGG - chr8_3:60410449-60410468 Msa1299300:intron 60.0%
TGGGGGCCACAGAAACCTTG+TGG - chr8_3:60410745-60410764 Msa1299300:CDS 60.0%
GGAGGAGGAGGAGGGGGTAA+AGG + chr8_3:60408675-60408694 None:intergenic 65.0%
TAGGGGTGGAGGAGGAGGAG+GGG + chr8_3:60408682-60408701 None:intergenic 65.0%
! TCACTGGTGCCAGGTGGAGG+CGG + chr8_3:60408717-60408736 None:intergenic 65.0%
! CCTTCACTGGTGCCAGGTGG+AGG + chr8_3:60408720-60408739 None:intergenic 65.0%
CCTCCACCTGGCACCAGTGA+AGG - chr8_3:60408717-60408736 Msa1299300:intron 65.0%
! TCGCCTTCACTGGTGCCAGG+TGG + chr8_3:60408723-60408742 None:intergenic 65.0%
GCCTACCTGACCAGGCTCCT+TGG + chr8_3:60408784-60408803 None:intergenic 65.0%
CCCCCATATGGTCCTCCACC+TGG - chr8_3:60409797-60409816 Msa1299300:CDS 65.0%
GGCCCAGGTGGAGGACCATA+TGG + chr8_3:60409803-60409822 None:intergenic 65.0%
ATTGGAGGAGGCCCAGGTGG+AGG + chr8_3:60409812-60409831 None:intergenic 65.0%
GGAGGACCAGGTGGAAGTGG+TGG + chr8_3:60409842-60409861 None:intergenic 65.0%
GGAGGAGGACCAGGTGGAAG+TGG + chr8_3:60409845-60409864 None:intergenic 65.0%
ATGGGAGGTGGGGGAGGCAG+TGG + chr8_3:60408552-60408571 None:intergenic 70.0%
! GGTGGCGGCAAAGGAGGTGG+TGG + chr8_3:60408612-60408631 None:intergenic 70.0%
!! GGTGGTGGCGGCAAAGGAGG+TGG + chr8_3:60408615-60408634 None:intergenic 70.0%
!! GGAGGTGGTGGCGGCAAAGG+AGG + chr8_3:60408618-60408637 None:intergenic 70.0%
!! CCAGGAGGTGGTGGCGGCAA+AGG + chr8_3:60408621-60408640 None:intergenic 70.0%
CCTTTGCCGCCACCACCTCC+TGG - chr8_3:60408618-60408637 Msa1299300:intron 70.0%
! GGAGGACCAGGAGGTGGTGG+CGG + chr8_3:60408627-60408646 None:intergenic 70.0%
GGTGGAGGACCAGGAGGTGG+TGG + chr8_3:60408630-60408649 None:intergenic 70.0%
AGGGGTGGAGGAGGAGGAGG+GGG + chr8_3:60408681-60408700 None:intergenic 70.0%
CAGTCTCAGCCGCCTCCACC+TGG - chr8_3:60408705-60408724 Msa1299300:intron 70.0%
!! CGACTTGGTGGAGGAGGCGG+CGG + chr8_3:60409488-60409507 None:intergenic 70.0%
CTTGGAGGAGGAGGAGGCCC+AGG + chr8_3:60409596-60409615 None:intergenic 70.0%
!! CCAGGAGGAGGTGCCTGACC+AGG + chr8_3:60409752-60409771 None:intergenic 70.0%
CCTGGTCAGGCACCTCCTCC+TGG - chr8_3:60409749-60409768 Msa1299300:CDS 70.0%
! GGAGGCATGGGAGGTGGGGG+AGG + chr8_3:60408558-60408577 None:intergenic 75.0%
CTTGGTGGAGGAGGCGGCGG+AGG + chr8_3:60409485-60409504 None:intergenic 75.0%
!! CAGGTGGTGGTGGGGGCGGT+GGG + chr8_3:60409697-60409716 None:intergenic 75.0%
!! TCAGGTGGTGGTGGGGGCGG+TGG + chr8_3:60409698-60409717 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 60405594 60411103 60405594 ID=Msa1299300;Name=Msa1299300
chr8_3 mRNA 60405594 60411103 60405594 ID=Msa1299300-mRNA-1;Parent=Msa1299300;Name=Msa1299300-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.83|0.71|1|0.83|0.85|7|440|466
chr8_3 exon 60405594 60406252 60405594 ID=Msa1299300-mRNA-1:exon:17668;Parent=Msa1299300-mRNA-1
chr8_3 exon 60406703 60407224 60406703 ID=Msa1299300-mRNA-1:exon:17667;Parent=Msa1299300-mRNA-1
chr8_3 exon 60407900 60408266 60407900 ID=Msa1299300-mRNA-1:exon:17666;Parent=Msa1299300-mRNA-1
chr8_3 exon 60408347 60408396 60408347 ID=Msa1299300-mRNA-1:exon:17665;Parent=Msa1299300-mRNA-1
chr8_3 exon 60409746 60409831 60409746 ID=Msa1299300-mRNA-1:exon:17664;Parent=Msa1299300-mRNA-1
chr8_3 exon 60410727 60410799 60410727 ID=Msa1299300-mRNA-1:exon:17663;Parent=Msa1299300-mRNA-1
chr8_3 exon 60411020 60411103 60411020 ID=Msa1299300-mRNA-1:exon:17662;Parent=Msa1299300-mRNA-1
chr8_3 CDS 60411020 60411103 60411020 ID=Msa1299300-mRNA-1:cds;Parent=Msa1299300-mRNA-1
chr8_3 CDS 60410727 60410799 60410727 ID=Msa1299300-mRNA-1:cds;Parent=Msa1299300-mRNA-1
chr8_3 CDS 60409746 60409831 60409746 ID=Msa1299300-mRNA-1:cds;Parent=Msa1299300-mRNA-1
chr8_3 CDS 60408347 60408396 60408347 ID=Msa1299300-mRNA-1:cds;Parent=Msa1299300-mRNA-1
chr8_3 CDS 60407900 60408266 60407900 ID=Msa1299300-mRNA-1:cds;Parent=Msa1299300-mRNA-1
chr8_3 CDS 60406703 60407224 60406703 ID=Msa1299300-mRNA-1:cds;Parent=Msa1299300-mRNA-1
chr8_3 CDS 60406034 60406252 60406034 ID=Msa1299300-mRNA-1:cds;Parent=Msa1299300-mRNA-1
chr8_3 three_prime_UTR 60405594 60406033 60405594 ID=Msa1299300-mRNA-1:three_prime_utr;Parent=Msa1299300-mRNA-1
Gene Sequence

>Msa1299300

ATGACGAAGACGACTAAAGGTGGTAAGGTGATGAACCCTACCGATGCTTATCGAAAGGAGCTTCGCAAAAAGGAATTGAAAAGGGTGAGGGATGTGGGGATTTTGAAAAAAGATCCTGATCAACTCAAGAAGCAGATTGAGAACTTGGAAATGATGAAGGCTGATGGTGCATTGGATAAAGCAAGAAAGCACAAAAGTAAGCAACTAAAACAAACACTTGATCTTGTCATTAAGAAGCAGAAGGAACATGATGAGAAAAGGCGGGAGAAGGGTGAGCCCCCTGTTATGTTCAGTCATTTGGGGCTTCCTCAAAGGAGAACAAGTGCAGAAGAAGAAGAGATAGTTAATCCCCCACCACCACCACTACCTGAAGCTAGTTCAGCTGATGGTGCTGTTTTACCTGCATCTTTGCCACTGCCTCCCCCACCTCCCATGCCTCCAAATCCCACTACTGCGGTGCCTGCATCATTACCACCACCTCCTTTGCCGCCACCACCTCCTGGTCCTCCACCTAAAGAGCAAGCTGTAAATCGGCCTTTACCCCCTCCTCCTCCTCCACCCCTAAAACAGTCTCAGCCGCCTCCACCTGGCACCAGTGAAGGCGAAGAGAGAAATCAATATGCATTGCCAGATAATCTATCTTCCAAGGAGCCTGGTCAGGTGCATCTTCCTCCGCCGCCTCCTCCACCAAGTCGTATGCCACCAAATTCTGGTGCTATTCAGTCTGATGGTACTGACAATAAGAACTCTTATGCAAACCAGGAGATCCAAGAAATGGTTCCTGGGCCTCCTCCTCCTCCAAGACAACAACCTCCTTGTCCAGGACCCTCATTAATCCCAAGTTTACAGCCTGATGTATTGCCCCCTGGAATATCTCGATTCCCACCGCCCCCACCACCACCTGATATGAGGCCTCCATTACCTGTGACTGGACTTCCTGGTCAGGCACCTCCTCCTGGAATGATGGTCCCCCTAATCTTAAGGCCCCCATATGGTCCTCCACCTGGGCCTCCTCCAATGATGAGACCACCACTTCCACCTGGTCCTCCTCCAAACTTTCAGGAAGAGGATCATATGGCAAGTAAGCCACTTCCTCCTCAGAAACCATCATATGTTAAATCTGCTGCTTCTACTGTTGTTAAAAGGCCATTAGCTCAGCACACTCCAGAACTCACATCTATGGTTCCTGCATCTGTGCGGGTGAGAAGGGAGACCGCAATGACCAAAACAAAACCAAAACCACCTGTGTCAACAGCTAGAACAGTCCCTGTGACACTCGGGCCAACTATTGTAAAACCAGAATCAGTGAGCTCGTCATCTGCTCCAAAAGCACCAAGCATTGATGACTCATACACAGCTTTCTTAGAGGACATGAAATCCCTTGGCGCACTTGATGGTTGA
Protein sequence

>Msa1299300

MTKTTKGGKVMNPTDAYRKELRKKELKRVRDVGILKKDPDQLKKQIENLEMMKADGALDKARKHKSKQLKQTLDLVIKKQKEHDEKRREKGEPPVMFSHLGLPQRRTSAEEEEIVNPPPPPLPEASSADGAVLPASLPLPPPPPMPPNPTTAVPASLPPPPLPPPPPGPPPKEQAVNRPLPPPPPPPLKQSQPPPPGTSEGEERNQYALPDNLSSKEPGQVHLPPPPPPPSRMPPNSGAIQSDGTDNKNSYANQEIQEMVPGPPPPPRQQPPCPGPSLIPSLQPDVLPPGISRFPPPPPPPDMRPPLPVTGLPGQAPPPGMMVPLILRPPYGPPPGPPPMMRPPLPPGPPPNFQEEDHMASKPLPPQKPSYVKSAASTVVKRPLAQHTPELTSMVPASVRVRRETAMTKTKPKPPVSTARTVPVTLGPTIVKPESVSSSSAPKAPSIDDSYTAFLEDMKSLGALDG*