Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211750 | sp|Q5EA79|GALM_BOVIN | 41.284 | 327 | 184 | 6 | 34 | 358 | 22 | 342 | 8.21e-78 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211750 | A0A396IH88 | 98.603 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 0.0 | 726 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0052350 | Msa1211750 | -0.804800 | 1.815571e-49 | -8.615850e-47 |
| Msa1210120 | Msa1211750 | 0.817804 | 2.726870e-52 | -8.615850e-47 |
| Msa1211750 | Msa1299570 | 0.934689 | 2.735636e-96 | -8.615850e-47 |
| Msa1211750 | Msa1299630 | 0.931453 | 3.694823e-94 | -8.615850e-47 |
| Msa1211750 | Msa1418960 | -0.812411 | 4.298479e-51 | -8.615850e-47 |
| Msa1211750 | Msa1461570 | 0.922749 | 6.556449e-89 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211750 | MtrunA17_Chr4g0060521 | 98.603 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 0.0 | 726 |
| Msa1211750 | MtrunA17_Chr7g0217021 | 55.367 | 354 | 153 | 2 | 7 | 355 | 4 | 357 | 6.13e-138 | 396 |
| Msa1211750 | MtrunA17_Chr6g0452991 | 51.781 | 365 | 165 | 6 | 1 | 355 | 1 | 364 | 4.35e-127 | 369 |
| Msa1211750 | MtrunA17_Chr6g0452971 | 50.137 | 365 | 171 | 6 | 1 | 355 | 1 | 364 | 1.11e-121 | 355 |
| Msa1211750 | MtrunA17_Chr6g0478501 | 46.269 | 335 | 176 | 3 | 25 | 355 | 2 | 336 | 7.72e-106 | 314 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211750 | AT3G47800.1 | 59.697 | 330 | 133 | 0 | 28 | 357 | 28 | 357 | 6.06e-149 | 424 |
| Msa1211750 | AT5G15140.1 | 57.530 | 332 | 137 | 2 | 27 | 355 | 156 | 486 | 1.59e-135 | 395 |
| Msa1211750 | AT3G17940.1 | 47.130 | 331 | 169 | 3 | 33 | 357 | 11 | 341 | 1.77e-108 | 321 |
| Msa1211750 | AT3G01260.1 | 42.331 | 326 | 159 | 7 | 34 | 355 | 122 | 422 | 3.51e-74 | 236 |
Find 102 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTTCTAATCTACGTTTA+AGG | 0.102925 | 8_1:-71479022 | None:intergenic |
| TAATCTACGTTTAAGGTTAT+TGG | 0.113160 | 8_1:-71479015 | None:intergenic |
| CGTTATCACCGAACCCTTTC+TGG | 0.147008 | 8_1:-71479916 | None:intergenic |
| ACTGGTGTGGGTTTGTTTAC+TGG | 0.147997 | 8_1:-71480568 | None:intergenic |
| GTCTACTTCGGTGGTCTTAT+TGG | 0.151365 | 8_1:+71479679 | Msa1211750:CDS |
| AAGGAAATGTCTGTTATATT+TGG | 0.171677 | 8_1:-71478973 | None:intergenic |
| TTAGGCTTATTCACAGAATC+TGG | 0.255239 | 8_1:-71481012 | None:intergenic |
| AATCACACTGTTCAAATCTT+TGG | 0.259282 | 8_1:+71480649 | Msa1211750:CDS |
| GCATGTTGTGCTAGATTTAC+TGG | 0.284935 | 8_1:-71480586 | None:intergenic |
| ATTTGACTTCCAACTTGTTT+TGG | 0.291351 | 8_1:-71480757 | None:intergenic |
| TAAGGTTATTGGATAAGTTT+AGG | 0.303289 | 8_1:-71479004 | None:intergenic |
| CGGATTCAAGTTTGCCTGTT+GGG | 0.308266 | 8_1:-71480705 | None:intergenic |
| ACCTGTCTCAGGAAGGAAAA+TGG | 0.309640 | 8_1:+71480867 | Msa1211750:CDS |
| TCTACTTCGGTGGTCTTATT+GGG | 0.313290 | 8_1:+71479680 | Msa1211750:CDS |
| ACACTTACGTCAAGCTTTCC+AGG | 0.329020 | 8_1:-71480493 | None:intergenic |
| GTTCTACATATATATCTCTA+TGG | 0.335584 | 8_1:+71479079 | Msa1211750:five_prime_UTR |
| TTGTGTCCTCTTGGGGCTCC+TGG | 0.337282 | 8_1:+71479177 | Msa1211750:CDS |
| CAAGAGGACACAAAATAATA+AGG | 0.338110 | 8_1:-71479167 | None:intergenic |
| GAAATTGGCCCCACAAAATT+CGG | 0.350538 | 8_1:-71479048 | None:intergenic |
| GAATAAAATTATATCGTGTT+TGG | 0.351335 | 8_1:-71481261 | None:intergenic |
| ACAATCTGAGATGGAAAGTT+AGG | 0.353204 | 8_1:-71481030 | None:intergenic |
| CAAGACAAACCATGTTTATC+AGG | 0.353823 | 8_1:-71479325 | None:intergenic |
| GTAGAACTGAAGGAGGAAAT+TGG | 0.358714 | 8_1:-71479063 | None:intergenic |
| GTTGCTTGAAAAGAACATAT+TGG | 0.382460 | 8_1:+71480525 | Msa1211750:CDS |
| TATCATGGTTTATCGATTCA+TGG | 0.386506 | 8_1:+71481077 | Msa1211750:CDS |
| AGGGTTAATTTGACAAACTA+TGG | 0.390776 | 8_1:+71479277 | Msa1211750:CDS |
| TTATTGGGCGTGTGGCAAAT+AGG | 0.397686 | 8_1:+71479695 | Msa1211750:CDS |
| CAAGTATGGTGGCATTGCTT+TGG | 0.405496 | 8_1:+71480975 | Msa1211750:CDS |
| TGTGGGTTTGTTTACTGGCT+TGG | 0.409918 | 8_1:-71480563 | None:intergenic |
| AGTCAAATTAATGACCTTCC+TGG | 0.412379 | 8_1:+71480772 | Msa1211750:CDS |
| TTGCTTGAAAAGAACATATT+GGG | 0.414739 | 8_1:+71480526 | Msa1211750:CDS |
| AGTGAGAAAAGTGAGAAGAT+TGG | 0.420991 | 8_1:+71479226 | Msa1211750:CDS |
| AAAGTGGCTGATGTTGTTCT+TGG | 0.422078 | 8_1:+71479428 | Msa1211750:CDS |
| ATCTAGCACAACATGCATAC+TGG | 0.440235 | 8_1:+71480593 | Msa1211750:CDS |
| CACCACTGTTGTGGCCTCCT+AGG | 0.441891 | 8_1:-71480618 | None:intergenic |
| CAACATGCATACTGGAACCT+AGG | 0.444782 | 8_1:+71480601 | Msa1211750:CDS |
| AATGATAACATTGTGTATAC+TGG | 0.450709 | 8_1:+71481236 | Msa1211750:three_prime_UTR |
| GGAGCTACATATCACAAGTA+TGG | 0.454827 | 8_1:+71480961 | Msa1211750:CDS |
| TTTGGTTTAAGGAAATCATA+TGG | 0.455507 | 8_1:-71480739 | None:intergenic |
| GAAATTGCAGGTGGCCAGAA+AGG | 0.457841 | 8_1:+71479902 | Msa1211750:intron |
| AAATTGCCAGCTAATGATCA+TGG | 0.472562 | 8_1:+71479757 | Msa1211750:CDS |
| ATCATATGGCGTGTTCTTCA+CGG | 0.473462 | 8_1:-71480725 | None:intergenic |
| GATGATAAACTCATCCCAAC+AGG | 0.473597 | 8_1:+71480691 | Msa1211750:CDS |
| TTCTTTCACTATACAAACCT+TGG | 0.474623 | 8_1:-71480845 | None:intergenic |
| TTCCTTAAACCAAAACAAGT+TGG | 0.480970 | 8_1:+71480748 | Msa1211750:CDS |
| CCATCTCAGATTGTGAAGCC+TGG | 0.483704 | 8_1:+71481039 | Msa1211750:CDS |
| TGGAGGAGCTCAATTCACTT+TGG | 0.490944 | 8_1:+71479720 | Msa1211750:CDS |
| ATATGCTTGTATGTCTCTCC+AGG | 0.492010 | 8_1:-71481057 | None:intergenic |
| GCAGGTGGCCAGAAAGGGTT+CGG | 0.495854 | 8_1:+71479908 | Msa1211750:intron |
| TGTGCTAGATTTACTGGTGT+GGG | 0.510614 | 8_1:-71480580 | None:intergenic |
| GGAGCTCAATTCACTTTGGA+TGG | 0.518150 | 8_1:+71479724 | Msa1211750:CDS |
| ACGGATTCAAGTTTGCCTGT+TGG | 0.520845 | 8_1:-71480706 | None:intergenic |
| TATAGTATTGCAATCCAACT+TGG | 0.523209 | 8_1:-71480903 | None:intergenic |
| CCAGGCTTCACAATCTGAGA+TGG | 0.524924 | 8_1:-71481039 | None:intergenic |
| GGGCGTGTGGCAAATAGGAT+TGG | 0.526639 | 8_1:+71479700 | Msa1211750:CDS |
| AAGGGTTCGGTGATAACGTA+TGG | 0.530622 | 8_1:+71479921 | Msa1211750:CDS |
| AACTACGCAATTGACGTGAA+TGG | 0.533501 | 8_1:+71480808 | Msa1211750:CDS |
| TAGGCTTATTCACAGAATCT+GGG | 0.535737 | 8_1:-71481011 | None:intergenic |
| TGATTCCATTGAGCAATATG+AGG | 0.542382 | 8_1:+71479454 | Msa1211750:CDS |
| GGGATGAGTTTATCATCTAC+CGG | 0.542823 | 8_1:-71480685 | None:intergenic |
| TATATATGTAGAACTGAAGG+AGG | 0.543464 | 8_1:-71479070 | None:intergenic |
| ATAGTGAAAGAACCTGTCTC+AGG | 0.544121 | 8_1:+71480856 | Msa1211750:CDS |
| GTGTTCCCATGATCATTAGC+TGG | 0.546884 | 8_1:-71479763 | None:intergenic |
| TTGTGCTAGATTTACTGGTG+TGG | 0.547703 | 8_1:-71480581 | None:intergenic |
| AAATTGCAGGTGGCCAGAAA+GGG | 0.548265 | 8_1:+71479903 | Msa1211750:intron |
| TCATACCTCATATTGCTCAA+TGG | 0.551688 | 8_1:-71479459 | None:intergenic |
| TGAAATTTGATGCAGACTGA+TGG | 0.555921 | 8_1:+71479655 | Msa1211750:intron |
| ACTGATACTAAAGGAAAGGA+TGG | 0.557269 | 8_1:+71480940 | Msa1211750:CDS |
| CGGTGGTCTTATTGGGCGTG+TGG | 0.557522 | 8_1:+71479687 | Msa1211750:CDS |
| AGATATATATGTAGAACTGA+AGG | 0.560239 | 8_1:-71479073 | None:intergenic |
| CGTGTGGCAAATAGGATTGG+AGG | 0.564047 | 8_1:+71479703 | Msa1211750:CDS |
| GAGAAATAATTGTTCAACAA+TGG | 0.565502 | 8_1:+71479135 | Msa1211750:exon |
| TAATTGTTCAACAATGGCTA+AGG | 0.569688 | 8_1:+71479141 | Msa1211750:exon |
| GTTGACTGATACTAAAGGAA+AGG | 0.576122 | 8_1:+71480936 | Msa1211750:CDS |
| TTTATCATCTACCGGTGTGA+TGG | 0.578356 | 8_1:-71480677 | None:intergenic |
| GATCATGGGAACACACTCCA+TGG | 0.584348 | 8_1:+71479772 | Msa1211750:CDS |
| GGCATTGCTTTGGAGACACA+AGG | 0.585444 | 8_1:+71480985 | Msa1211750:CDS |
| AATTGCCAGCTAATGATCAT+GGG | 0.589702 | 8_1:+71479758 | Msa1211750:CDS |
| GAGTTGTGGTCAAACCAAGT+TGG | 0.590032 | 8_1:+71480889 | Msa1211750:CDS |
| AAGCTAAATGATGAACAAGA+AGG | 0.594580 | 8_1:-71481183 | None:intergenic |
| AGAGACATACAAGCATATCA+TGG | 0.596154 | 8_1:+71481062 | Msa1211750:CDS |
| TGGTCAAAATCATTTAACCA+AGG | 0.602850 | 8_1:+71480828 | Msa1211750:CDS |
| CAGACTGATGGAGTCTACTT+CGG | 0.614831 | 8_1:+71479667 | Msa1211750:intron |
| TGAAAGAACCTGTCTCAGGA+AGG | 0.620515 | 8_1:+71480860 | Msa1211750:CDS |
| GTTTATGTACCTGATAAACA+TGG | 0.622676 | 8_1:+71479316 | Msa1211750:CDS |
| TTCACCATCAAAACTGTGGT+AGG | 0.630989 | 8_1:-71479984 | None:intergenic |
| GGAATGTTGACTGATACTAA+AGG | 0.631864 | 8_1:+71480931 | Msa1211750:CDS |
| AATGTGCATGAATGTGAACC+AGG | 0.632824 | 8_1:-71479195 | None:intergenic |
| TAAGAATGTCACCACTGTTG+TGG | 0.637458 | 8_1:-71480627 | None:intergenic |
| CAGGAAGGAAAATGGAGTTG+TGG | 0.640117 | 8_1:+71480875 | Msa1211750:CDS |
| GGATTGCAATACTATACTAG+TGG | 0.642698 | 8_1:+71480910 | Msa1211750:CDS |
| TAATGTCGTATAAACCAGGA+AGG | 0.653054 | 8_1:-71480786 | None:intergenic |
| TAGTTAATGTCGTATAAACC+AGG | 0.656726 | 8_1:-71480790 | None:intergenic |
| CATGCATACTGGAACCTAGG+AGG | 0.665406 | 8_1:+71480604 | Msa1211750:CDS |
| ACTGATGGAGTCTACTTCGG+TGG | 0.669276 | 8_1:+71479670 | Msa1211750:CDS |
| GCTACATATCACAAGTATGG+TGG | 0.672659 | 8_1:+71480964 | Msa1211750:CDS |
| AACCTAGGAGGCCACAACAG+TGG | 0.673482 | 8_1:+71480616 | Msa1211750:CDS |
| CTTTGGTTCATCCATCACAC+CGG | 0.680058 | 8_1:+71480666 | Msa1211750:CDS |
| CTTGTTCACCATCAAAACTG+TGG | 0.689661 | 8_1:-71479988 | None:intergenic |
| ATGGAAAGTAGCAGTTCACA+AGG | 0.691394 | 8_1:+71479940 | Msa1211750:CDS |
| TGTGAACCAGGAGCCCCAAG+AGG | 0.692581 | 8_1:-71479183 | None:intergenic |
| ATAAGTTTAGGATTTCAACA+AGG | 0.716453 | 8_1:-71478992 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTATATAAATATTAATG+TGG | - | chr8_1:71479384-71479403 | None:intergenic | 10.0% |
| !!! | TTCAAAATTTAAAATCAAAA+CGG | - | chr8_1:71480325-71480344 | None:intergenic | 10.0% |
| !! | AAGTTATATAAATATTAATG+TGG | - | chr8_1:71479384-71479403 | None:intergenic | 10.0% |
| !!! | TTCAAAATTTAAAATCAAAA+CGG | - | chr8_1:71480325-71480344 | None:intergenic | 10.0% |
| !! | TAAATATTAATGTGGAATAA+GGG | - | chr8_1:71479376-71479395 | None:intergenic | 15.0% |
| !! | ATAAATATTAATGTGGAATA+AGG | - | chr8_1:71479377-71479396 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATTTACTTTTCC+AGG | + | chr8_1:71479404-71479423 | Msa1211750:intron | 15.0% |
| !!! | TTTTTTTATTTACTTTTCCA+GGG | + | chr8_1:71479405-71479424 | Msa1211750:intron | 15.0% |
| !! | TACTATATATAAGAGAAAAT+TGG | + | chr8_1:71479575-71479594 | Msa1211750:intron | 15.0% |
| !! | TTTGTACTTTCATTTAATTA+CGG | + | chr8_1:71480012-71480031 | Msa1211750:intron | 15.0% |
| !! | GAATAGTTAAATTATATATG+TGG | - | chr8_1:71480042-71480061 | None:intergenic | 15.0% |
| !! | TAAATATTAATGTGGAATAA+GGG | - | chr8_1:71479376-71479395 | None:intergenic | 15.0% |
| !! | ATAAATATTAATGTGGAATA+AGG | - | chr8_1:71479377-71479396 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATTTACTTTTCC+AGG | + | chr8_1:71479404-71479423 | Msa1211750:intron | 15.0% |
| !!! | TTTTTTTATTTACTTTTCCA+GGG | + | chr8_1:71479405-71479424 | Msa1211750:intron | 15.0% |
| !! | TACTATATATAAGAGAAAAT+TGG | + | chr8_1:71479575-71479594 | Msa1211750:intron | 15.0% |
| !! | TTTGTACTTTCATTTAATTA+CGG | + | chr8_1:71480012-71480031 | Msa1211750:intron | 15.0% |
| !! | GAATAGTTAAATTATATATG+TGG | - | chr8_1:71480042-71480061 | None:intergenic | 15.0% |
| !!! | GGATTTTATGAGTTAAAAAA+AGG | + | chr8_1:71479247-71479266 | Msa1211750:CDS | 20.0% |
| !! | ATATTAATATTAACGTACCA+TGG | - | chr8_1:71479792-71479811 | None:intergenic | 20.0% |
| !! | TACGATTCTTTGTAATATTA+AGG | + | chr8_1:71480167-71480186 | Msa1211750:intron | 20.0% |
| !! | GAATAAAATTATATCGTGTT+TGG | - | chr8_1:71481264-71481283 | None:intergenic | 20.0% |
| !!! | GGATTTTATGAGTTAAAAAA+AGG | + | chr8_1:71479247-71479266 | Msa1211750:CDS | 20.0% |
| !! | ATATTAATATTAACGTACCA+TGG | - | chr8_1:71479792-71479811 | None:intergenic | 20.0% |
| !! | TACGATTCTTTGTAATATTA+AGG | + | chr8_1:71480167-71480186 | Msa1211750:intron | 20.0% |
| !! | GAATAAAATTATATCGTGTT+TGG | - | chr8_1:71481264-71481283 | None:intergenic | 20.0% |
| ! | AAGGAAATGTCTGTTATATT+TGG | - | chr8_1:71478976-71478995 | None:intergenic | 25.0% |
| !! | ATAAGTTTAGGATTTCAACA+AGG | - | chr8_1:71478995-71479014 | None:intergenic | 25.0% |
| ! | TAAGGTTATTGGATAAGTTT+AGG | - | chr8_1:71479007-71479026 | None:intergenic | 25.0% |
| !! | TAATCTACGTTTAAGGTTAT+TGG | - | chr8_1:71479018-71479037 | None:intergenic | 25.0% |
| ! | AACTTTCTAATCTACGTTTA+AGG | - | chr8_1:71479025-71479044 | None:intergenic | 25.0% |
| !! | AAAGTTAATCCGAATTTTGT+GGG | + | chr8_1:71479039-71479058 | Msa1211750:five_prime_UTR | 25.0% |
| ! | AGATATATATGTAGAACTGA+AGG | - | chr8_1:71479076-71479095 | None:intergenic | 25.0% |
| ! | GTTCTACATATATATCTCTA+TGG | + | chr8_1:71479079-71479098 | Msa1211750:five_prime_UTR | 25.0% |
| ! | GAGAAATAATTGTTCAACAA+TGG | + | chr8_1:71479135-71479154 | Msa1211750:exon | 25.0% |
| !!! | TTATTATTTTGTGTCCTCTT+GGG | + | chr8_1:71479169-71479188 | Msa1211750:CDS | 25.0% |
| !! | AGTTAAAAAAAGGAAGTATG+AGG | + | chr8_1:71479257-71479276 | Msa1211750:CDS | 25.0% |
| !! | GTTAAAAAAAGGAAGTATGA+GGG | + | chr8_1:71479258-71479277 | Msa1211750:CDS | 25.0% |
| ! | TTAATCATTGATGAAATTGC+AGG | + | chr8_1:71479890-71479909 | Msa1211750:intron | 25.0% |
| ! | AGTTAAATTATATATGTGGC+AGG | - | chr8_1:71480038-71480057 | None:intergenic | 25.0% |
| !!! | AGTTTTATTGCTACAAACAT+GGG | - | chr8_1:71480427-71480446 | None:intergenic | 25.0% |
| !!! | TAGTTTTATTGCTACAAACA+TGG | - | chr8_1:71480428-71480447 | None:intergenic | 25.0% |
| ! | TTTGCAAAATAAAACTCAAC+AGG | + | chr8_1:71480466-71480485 | Msa1211750:intron | 25.0% |
| ! | TTGCTTGAAAAGAACATATT+GGG | + | chr8_1:71480526-71480545 | Msa1211750:CDS | 25.0% |
| !! | TTTGGTTTAAGGAAATCATA+TGG | - | chr8_1:71480742-71480761 | None:intergenic | 25.0% |
| ! | AATGATAACATTGTGTATAC+TGG | + | chr8_1:71481236-71481255 | Msa1211750:three_prime_UTR | 25.0% |
| ! | AAGGAAATGTCTGTTATATT+TGG | - | chr8_1:71478976-71478995 | None:intergenic | 25.0% |
| !! | ATAAGTTTAGGATTTCAACA+AGG | - | chr8_1:71478995-71479014 | None:intergenic | 25.0% |
| ! | TAAGGTTATTGGATAAGTTT+AGG | - | chr8_1:71479007-71479026 | None:intergenic | 25.0% |
| !! | TAATCTACGTTTAAGGTTAT+TGG | - | chr8_1:71479018-71479037 | None:intergenic | 25.0% |
| ! | AACTTTCTAATCTACGTTTA+AGG | - | chr8_1:71479025-71479044 | None:intergenic | 25.0% |
| !! | AAAGTTAATCCGAATTTTGT+GGG | + | chr8_1:71479039-71479058 | Msa1211750:five_prime_UTR | 25.0% |
| ! | AGATATATATGTAGAACTGA+AGG | - | chr8_1:71479076-71479095 | None:intergenic | 25.0% |
| ! | GTTCTACATATATATCTCTA+TGG | + | chr8_1:71479079-71479098 | Msa1211750:five_prime_UTR | 25.0% |
| ! | GAGAAATAATTGTTCAACAA+TGG | + | chr8_1:71479135-71479154 | Msa1211750:exon | 25.0% |
| !!! | TTATTATTTTGTGTCCTCTT+GGG | + | chr8_1:71479169-71479188 | Msa1211750:CDS | 25.0% |
| !! | AGTTAAAAAAAGGAAGTATG+AGG | + | chr8_1:71479257-71479276 | Msa1211750:CDS | 25.0% |
| !! | GTTAAAAAAAGGAAGTATGA+GGG | + | chr8_1:71479258-71479277 | Msa1211750:CDS | 25.0% |
| ! | TTAATCATTGATGAAATTGC+AGG | + | chr8_1:71479890-71479909 | Msa1211750:intron | 25.0% |
| ! | AGTTAAATTATATATGTGGC+AGG | - | chr8_1:71480038-71480057 | None:intergenic | 25.0% |
| !!! | AGTTTTATTGCTACAAACAT+GGG | - | chr8_1:71480427-71480446 | None:intergenic | 25.0% |
| !!! | TAGTTTTATTGCTACAAACA+TGG | - | chr8_1:71480428-71480447 | None:intergenic | 25.0% |
| ! | TTTGCAAAATAAAACTCAAC+AGG | + | chr8_1:71480466-71480485 | Msa1211750:intron | 25.0% |
| ! | TTGCTTGAAAAGAACATATT+GGG | + | chr8_1:71480526-71480545 | Msa1211750:CDS | 25.0% |
| !! | TTTGGTTTAAGGAAATCATA+TGG | - | chr8_1:71480742-71480761 | None:intergenic | 25.0% |
| ! | AATGATAACATTGTGTATAC+TGG | + | chr8_1:71481236-71481255 | Msa1211750:three_prime_UTR | 25.0% |
| ! | GAAAGTTAATCCGAATTTTG+TGG | + | chr8_1:71479038-71479057 | Msa1211750:five_prime_UTR | 30.0% |
| ! | AAGTTAATCCGAATTTTGTG+GGG | + | chr8_1:71479040-71479059 | Msa1211750:five_prime_UTR | 30.0% |
| TATATATGTAGAACTGAAGG+AGG | - | chr8_1:71479073-71479092 | None:intergenic | 30.0% | |
| TAATTGTTCAACAATGGCTA+AGG | + | chr8_1:71479141-71479160 | Msa1211750:exon | 30.0% | |
| CAAGAGGACACAAAATAATA+AGG | - | chr8_1:71479170-71479189 | None:intergenic | 30.0% | |
| !! | CTTATTATTTTGTGTCCTCT+TGG | + | chr8_1:71479168-71479187 | Msa1211750:CDS | 30.0% |
| !! | TATTATTTTGTGTCCTCTTG+GGG | + | chr8_1:71479170-71479189 | Msa1211750:CDS | 30.0% |
| ! | AGGGTTAATTTGACAAACTA+TGG | + | chr8_1:71479277-71479296 | Msa1211750:CDS | 30.0% |
| GTTTATGTACCTGATAAACA+TGG | + | chr8_1:71479316-71479335 | Msa1211750:CDS | 30.0% | |
| CAAAGAATCGTATACAAATG+AGG | - | chr8_1:71480159-71480178 | None:intergenic | 30.0% | |
| ! | ACCTTTTGTTCGTTTTATCA+CGG | + | chr8_1:71480221-71480240 | Msa1211750:intron | 30.0% |
| !! | GTTTTATTGCTACAAACATG+GGG | - | chr8_1:71480426-71480445 | None:intergenic | 30.0% |
| GTTGCTTGAAAAGAACATAT+TGG | + | chr8_1:71480525-71480544 | Msa1211750:CDS | 30.0% | |
| AATCACACTGTTCAAATCTT+TGG | + | chr8_1:71480649-71480668 | Msa1211750:CDS | 30.0% | |
| TTCCTTAAACCAAAACAAGT+TGG | + | chr8_1:71480748-71480767 | Msa1211750:CDS | 30.0% | |
| !!! | TTCCAACTTGTTTTGGTTTA+AGG | - | chr8_1:71480753-71480772 | None:intergenic | 30.0% |
| !! | ATTTGACTTCCAACTTGTTT+TGG | - | chr8_1:71480760-71480779 | None:intergenic | 30.0% |
| TAGTTAATGTCGTATAAACC+AGG | - | chr8_1:71480793-71480812 | None:intergenic | 30.0% | |
| TGGTCAAAATCATTTAACCA+AGG | + | chr8_1:71480828-71480847 | Msa1211750:CDS | 30.0% | |
| TTCTTTCACTATACAAACCT+TGG | - | chr8_1:71480848-71480867 | None:intergenic | 30.0% | |
| TATAGTATTGCAATCCAACT+TGG | - | chr8_1:71480906-71480925 | None:intergenic | 30.0% | |
| !! | TATCATGGTTTATCGATTCA+TGG | + | chr8_1:71481077-71481096 | Msa1211750:CDS | 30.0% |
| AAGCTAAATGATGAACAAGA+AGG | - | chr8_1:71481186-71481205 | None:intergenic | 30.0% | |
| ! | GAAAGTTAATCCGAATTTTG+TGG | + | chr8_1:71479038-71479057 | Msa1211750:five_prime_UTR | 30.0% |
| ! | AAGTTAATCCGAATTTTGTG+GGG | + | chr8_1:71479040-71479059 | Msa1211750:five_prime_UTR | 30.0% |
| TATATATGTAGAACTGAAGG+AGG | - | chr8_1:71479073-71479092 | None:intergenic | 30.0% | |
| TAATTGTTCAACAATGGCTA+AGG | + | chr8_1:71479141-71479160 | Msa1211750:exon | 30.0% | |
| CAAGAGGACACAAAATAATA+AGG | - | chr8_1:71479170-71479189 | None:intergenic | 30.0% | |
| !! | CTTATTATTTTGTGTCCTCT+TGG | + | chr8_1:71479168-71479187 | Msa1211750:CDS | 30.0% |
| !! | TATTATTTTGTGTCCTCTTG+GGG | + | chr8_1:71479170-71479189 | Msa1211750:CDS | 30.0% |
| ! | AGGGTTAATTTGACAAACTA+TGG | + | chr8_1:71479277-71479296 | Msa1211750:CDS | 30.0% |
| GTTTATGTACCTGATAAACA+TGG | + | chr8_1:71479316-71479335 | Msa1211750:CDS | 30.0% | |
| CAAAGAATCGTATACAAATG+AGG | - | chr8_1:71480159-71480178 | None:intergenic | 30.0% | |
| ! | ACCTTTTGTTCGTTTTATCA+CGG | + | chr8_1:71480221-71480240 | Msa1211750:intron | 30.0% |
| !! | GTTTTATTGCTACAAACATG+GGG | - | chr8_1:71480426-71480445 | None:intergenic | 30.0% |
| GTTGCTTGAAAAGAACATAT+TGG | + | chr8_1:71480525-71480544 | Msa1211750:CDS | 30.0% | |
| AATCACACTGTTCAAATCTT+TGG | + | chr8_1:71480649-71480668 | Msa1211750:CDS | 30.0% | |
| TTCCTTAAACCAAAACAAGT+TGG | + | chr8_1:71480748-71480767 | Msa1211750:CDS | 30.0% | |
| !!! | TTCCAACTTGTTTTGGTTTA+AGG | - | chr8_1:71480753-71480772 | None:intergenic | 30.0% |
| !! | ATTTGACTTCCAACTTGTTT+TGG | - | chr8_1:71480760-71480779 | None:intergenic | 30.0% |
| TAGTTAATGTCGTATAAACC+AGG | - | chr8_1:71480793-71480812 | None:intergenic | 30.0% | |
| TGGTCAAAATCATTTAACCA+AGG | + | chr8_1:71480828-71480847 | Msa1211750:CDS | 30.0% | |
| TTCTTTCACTATACAAACCT+TGG | - | chr8_1:71480848-71480867 | None:intergenic | 30.0% | |
| TATAGTATTGCAATCCAACT+TGG | - | chr8_1:71480906-71480925 | None:intergenic | 30.0% | |
| !! | TATCATGGTTTATCGATTCA+TGG | + | chr8_1:71481077-71481096 | Msa1211750:CDS | 30.0% |
| AAGCTAAATGATGAACAAGA+AGG | - | chr8_1:71481186-71481205 | None:intergenic | 30.0% | |
| AGTGAGAAAAGTGAGAAGAT+TGG | + | chr8_1:71479226-71479245 | Msa1211750:CDS | 35.0% | |
| CAAGACAAACCATGTTTATC+AGG | - | chr8_1:71479328-71479347 | None:intergenic | 35.0% | |
| !! | ATTTACTTTTCCAGGGAAAG+TGG | + | chr8_1:71479412-71479431 | Msa1211750:intron | 35.0% |
| TGATTCCATTGAGCAATATG+AGG | + | chr8_1:71479454-71479473 | Msa1211750:CDS | 35.0% | |
| TCATACCTCATATTGCTCAA+TGG | - | chr8_1:71479462-71479481 | None:intergenic | 35.0% | |
| ! | GGATCAATAGTTGATGCATT+TGG | + | chr8_1:71479596-71479615 | Msa1211750:intron | 35.0% |
| ! | ATGCATTTGGTTCAAATCGT+GGG | + | chr8_1:71479609-71479628 | Msa1211750:intron | 35.0% |
| TGAAATTTGATGCAGACTGA+TGG | + | chr8_1:71479655-71479674 | Msa1211750:intron | 35.0% | |
| AAATTGCCAGCTAATGATCA+TGG | + | chr8_1:71479757-71479776 | Msa1211750:CDS | 35.0% | |
| AATTGCCAGCTAATGATCAT+GGG | + | chr8_1:71479758-71479777 | Msa1211750:CDS | 35.0% | |
| ATCATTGATGAAATTGCAGG+TGG | + | chr8_1:71479893-71479912 | Msa1211750:intron | 35.0% | |
| !! | TTTACCTACCACAGTTTTGA+TGG | + | chr8_1:71479980-71479999 | Msa1211750:CDS | 35.0% |
| ! | GAACAAAAGGTTTTCGATTG+TGG | - | chr8_1:71480212-71480231 | None:intergenic | 35.0% |
| GTACTAACGGTGTGAATTTA+GGG | - | chr8_1:71480280-71480299 | None:intergenic | 35.0% | |
| TGTACTAACGGTGTGAATTT+AGG | - | chr8_1:71480281-71480300 | None:intergenic | 35.0% | |
| ! | CATATTGCATTGGTGATTGT+TGG | - | chr8_1:71480394-71480413 | None:intergenic | 35.0% |
| ! | TAAAACTCAACAGGTTTTCC+TGG | + | chr8_1:71480475-71480494 | Msa1211750:intron | 35.0% |
| AGTCAAATTAATGACCTTCC+TGG | + | chr8_1:71480772-71480791 | Msa1211750:CDS | 35.0% | |
| TAATGTCGTATAAACCAGGA+AGG | - | chr8_1:71480789-71480808 | None:intergenic | 35.0% | |
| GGATTGCAATACTATACTAG+TGG | + | chr8_1:71480910-71480929 | Msa1211750:CDS | 35.0% | |
| ! | GGAATGTTGACTGATACTAA+AGG | + | chr8_1:71480931-71480950 | Msa1211750:CDS | 35.0% |
| GTTGACTGATACTAAAGGAA+AGG | + | chr8_1:71480936-71480955 | Msa1211750:CDS | 35.0% | |
| ACTGATACTAAAGGAAAGGA+TGG | + | chr8_1:71480940-71480959 | Msa1211750:CDS | 35.0% | |
| TAGGCTTATTCACAGAATCT+GGG | - | chr8_1:71481014-71481033 | None:intergenic | 35.0% | |
| TTAGGCTTATTCACAGAATC+TGG | - | chr8_1:71481015-71481034 | None:intergenic | 35.0% | |
| ! | ACAATCTGAGATGGAAAGTT+AGG | - | chr8_1:71481033-71481052 | None:intergenic | 35.0% |
| AGAGACATACAAGCATATCA+TGG | + | chr8_1:71481062-71481081 | Msa1211750:CDS | 35.0% | |
| AGTGAGAAAAGTGAGAAGAT+TGG | + | chr8_1:71479226-71479245 | Msa1211750:CDS | 35.0% | |
| CAAGACAAACCATGTTTATC+AGG | - | chr8_1:71479328-71479347 | None:intergenic | 35.0% | |
| !! | ATTTACTTTTCCAGGGAAAG+TGG | + | chr8_1:71479412-71479431 | Msa1211750:intron | 35.0% |
| TGATTCCATTGAGCAATATG+AGG | + | chr8_1:71479454-71479473 | Msa1211750:CDS | 35.0% | |
| TCATACCTCATATTGCTCAA+TGG | - | chr8_1:71479462-71479481 | None:intergenic | 35.0% | |
| ! | GGATCAATAGTTGATGCATT+TGG | + | chr8_1:71479596-71479615 | Msa1211750:intron | 35.0% |
| ! | ATGCATTTGGTTCAAATCGT+GGG | + | chr8_1:71479609-71479628 | Msa1211750:intron | 35.0% |
| TGAAATTTGATGCAGACTGA+TGG | + | chr8_1:71479655-71479674 | Msa1211750:intron | 35.0% | |
| AAATTGCCAGCTAATGATCA+TGG | + | chr8_1:71479757-71479776 | Msa1211750:CDS | 35.0% | |
| AATTGCCAGCTAATGATCAT+GGG | + | chr8_1:71479758-71479777 | Msa1211750:CDS | 35.0% | |
| ATCATTGATGAAATTGCAGG+TGG | + | chr8_1:71479893-71479912 | Msa1211750:intron | 35.0% | |
| !! | TTTACCTACCACAGTTTTGA+TGG | + | chr8_1:71479980-71479999 | Msa1211750:CDS | 35.0% |
| ! | GAACAAAAGGTTTTCGATTG+TGG | - | chr8_1:71480212-71480231 | None:intergenic | 35.0% |
| GTACTAACGGTGTGAATTTA+GGG | - | chr8_1:71480280-71480299 | None:intergenic | 35.0% | |
| TGTACTAACGGTGTGAATTT+AGG | - | chr8_1:71480281-71480300 | None:intergenic | 35.0% | |
| ! | CATATTGCATTGGTGATTGT+TGG | - | chr8_1:71480394-71480413 | None:intergenic | 35.0% |
| ! | TAAAACTCAACAGGTTTTCC+TGG | + | chr8_1:71480475-71480494 | Msa1211750:intron | 35.0% |
| AGTCAAATTAATGACCTTCC+TGG | + | chr8_1:71480772-71480791 | Msa1211750:CDS | 35.0% | |
| TAATGTCGTATAAACCAGGA+AGG | - | chr8_1:71480789-71480808 | None:intergenic | 35.0% | |
| GGATTGCAATACTATACTAG+TGG | + | chr8_1:71480910-71480929 | Msa1211750:CDS | 35.0% | |
| ! | GGAATGTTGACTGATACTAA+AGG | + | chr8_1:71480931-71480950 | Msa1211750:CDS | 35.0% |
| GTTGACTGATACTAAAGGAA+AGG | + | chr8_1:71480936-71480955 | Msa1211750:CDS | 35.0% | |
| ACTGATACTAAAGGAAAGGA+TGG | + | chr8_1:71480940-71480959 | Msa1211750:CDS | 35.0% | |
| TAGGCTTATTCACAGAATCT+GGG | - | chr8_1:71481014-71481033 | None:intergenic | 35.0% | |
| TTAGGCTTATTCACAGAATC+TGG | - | chr8_1:71481015-71481034 | None:intergenic | 35.0% | |
| ! | ACAATCTGAGATGGAAAGTT+AGG | - | chr8_1:71481033-71481052 | None:intergenic | 35.0% |
| AGAGACATACAAGCATATCA+TGG | + | chr8_1:71481062-71481081 | Msa1211750:CDS | 35.0% | |
| GAAATTGGCCCCACAAAATT+CGG | - | chr8_1:71479051-71479070 | None:intergenic | 40.0% | |
| GTAGAACTGAAGGAGGAAAT+TGG | - | chr8_1:71479066-71479085 | None:intergenic | 40.0% | |
| AATGTGCATGAATGTGAACC+AGG | - | chr8_1:71479198-71479217 | None:intergenic | 40.0% | |
| AAAGTGGCTGATGTTGTTCT+TGG | + | chr8_1:71479428-71479447 | Msa1211750:CDS | 40.0% | |
| ! | GATGCATTTGGTTCAAATCG+TGG | + | chr8_1:71479608-71479627 | Msa1211750:intron | 40.0% |
| !! | TCTACTTCGGTGGTCTTATT+GGG | + | chr8_1:71479680-71479699 | Msa1211750:CDS | 40.0% |
| ATGGAAAGTAGCAGTTCACA+AGG | + | chr8_1:71479940-71479959 | Msa1211750:CDS | 40.0% | |
| TTCACCATCAAAACTGTGGT+AGG | - | chr8_1:71479987-71480006 | None:intergenic | 40.0% | |
| CTTGTTCACCATCAAAACTG+TGG | - | chr8_1:71479991-71480010 | None:intergenic | 40.0% | |
| !!! | CACAGTTTTGATGGTGAACA+AGG | + | chr8_1:71479989-71480008 | Msa1211750:CDS | 40.0% |
| GTATACAAATGAGGCTGATG+TGG | - | chr8_1:71480150-71480169 | None:intergenic | 40.0% | |
| GCCGTGATAAAACGAACAAA+AGG | - | chr8_1:71480225-71480244 | None:intergenic | 40.0% | |
| GACAGTCATCGATGTACTAA+CGG | - | chr8_1:71480293-71480312 | None:intergenic | 40.0% | |
| GCTGCATCAACATATTGCAT+TGG | - | chr8_1:71480404-71480423 | None:intergenic | 40.0% | |
| TGTGCTAGATTTACTGGTGT+GGG | - | chr8_1:71480583-71480602 | None:intergenic | 40.0% | |
| TTGTGCTAGATTTACTGGTG+TGG | - | chr8_1:71480584-71480603 | None:intergenic | 40.0% | |
| GCATGTTGTGCTAGATTTAC+TGG | - | chr8_1:71480589-71480608 | None:intergenic | 40.0% | |
| ATCTAGCACAACATGCATAC+TGG | + | chr8_1:71480593-71480612 | Msa1211750:CDS | 40.0% | |
| TAAGAATGTCACCACTGTTG+TGG | - | chr8_1:71480630-71480649 | None:intergenic | 40.0% | |
| TTTATCATCTACCGGTGTGA+TGG | - | chr8_1:71480680-71480699 | None:intergenic | 40.0% | |
| GGGATGAGTTTATCATCTAC+CGG | - | chr8_1:71480688-71480707 | None:intergenic | 40.0% | |
| GATGATAAACTCATCCCAAC+AGG | + | chr8_1:71480691-71480710 | Msa1211750:CDS | 40.0% | |
| ATCATATGGCGTGTTCTTCA+CGG | - | chr8_1:71480728-71480747 | None:intergenic | 40.0% | |
| AACTACGCAATTGACGTGAA+TGG | + | chr8_1:71480808-71480827 | Msa1211750:CDS | 40.0% | |
| ATAGTGAAAGAACCTGTCTC+AGG | + | chr8_1:71480856-71480875 | Msa1211750:CDS | 40.0% | |
| GGAGCTACATATCACAAGTA+TGG | + | chr8_1:71480961-71480980 | Msa1211750:CDS | 40.0% | |
| GCTACATATCACAAGTATGG+TGG | + | chr8_1:71480964-71480983 | Msa1211750:CDS | 40.0% | |
| ATATGCTTGTATGTCTCTCC+AGG | - | chr8_1:71481060-71481079 | None:intergenic | 40.0% | |
| GAAATTGGCCCCACAAAATT+CGG | - | chr8_1:71479051-71479070 | None:intergenic | 40.0% | |
| GTAGAACTGAAGGAGGAAAT+TGG | - | chr8_1:71479066-71479085 | None:intergenic | 40.0% | |
| AATGTGCATGAATGTGAACC+AGG | - | chr8_1:71479198-71479217 | None:intergenic | 40.0% | |
| AAAGTGGCTGATGTTGTTCT+TGG | + | chr8_1:71479428-71479447 | Msa1211750:CDS | 40.0% | |
| ! | GATGCATTTGGTTCAAATCG+TGG | + | chr8_1:71479608-71479627 | Msa1211750:intron | 40.0% |
| !! | TCTACTTCGGTGGTCTTATT+GGG | + | chr8_1:71479680-71479699 | Msa1211750:CDS | 40.0% |
| ATGGAAAGTAGCAGTTCACA+AGG | + | chr8_1:71479940-71479959 | Msa1211750:CDS | 40.0% | |
| TTCACCATCAAAACTGTGGT+AGG | - | chr8_1:71479987-71480006 | None:intergenic | 40.0% | |
| CTTGTTCACCATCAAAACTG+TGG | - | chr8_1:71479991-71480010 | None:intergenic | 40.0% | |
| !!! | CACAGTTTTGATGGTGAACA+AGG | + | chr8_1:71479989-71480008 | Msa1211750:CDS | 40.0% |
| GTATACAAATGAGGCTGATG+TGG | - | chr8_1:71480150-71480169 | None:intergenic | 40.0% | |
| GCCGTGATAAAACGAACAAA+AGG | - | chr8_1:71480225-71480244 | None:intergenic | 40.0% | |
| GACAGTCATCGATGTACTAA+CGG | - | chr8_1:71480293-71480312 | None:intergenic | 40.0% | |
| GCTGCATCAACATATTGCAT+TGG | - | chr8_1:71480404-71480423 | None:intergenic | 40.0% | |
| TGTGCTAGATTTACTGGTGT+GGG | - | chr8_1:71480583-71480602 | None:intergenic | 40.0% | |
| TTGTGCTAGATTTACTGGTG+TGG | - | chr8_1:71480584-71480603 | None:intergenic | 40.0% | |
| GCATGTTGTGCTAGATTTAC+TGG | - | chr8_1:71480589-71480608 | None:intergenic | 40.0% | |
| ATCTAGCACAACATGCATAC+TGG | + | chr8_1:71480593-71480612 | Msa1211750:CDS | 40.0% | |
| TAAGAATGTCACCACTGTTG+TGG | - | chr8_1:71480630-71480649 | None:intergenic | 40.0% | |
| TTTATCATCTACCGGTGTGA+TGG | - | chr8_1:71480680-71480699 | None:intergenic | 40.0% | |
| GGGATGAGTTTATCATCTAC+CGG | - | chr8_1:71480688-71480707 | None:intergenic | 40.0% | |
| GATGATAAACTCATCCCAAC+AGG | + | chr8_1:71480691-71480710 | Msa1211750:CDS | 40.0% | |
| ATCATATGGCGTGTTCTTCA+CGG | - | chr8_1:71480728-71480747 | None:intergenic | 40.0% | |
| AACTACGCAATTGACGTGAA+TGG | + | chr8_1:71480808-71480827 | Msa1211750:CDS | 40.0% | |
| ATAGTGAAAGAACCTGTCTC+AGG | + | chr8_1:71480856-71480875 | Msa1211750:CDS | 40.0% | |
| GGAGCTACATATCACAAGTA+TGG | + | chr8_1:71480961-71480980 | Msa1211750:CDS | 40.0% | |
| GCTACATATCACAAGTATGG+TGG | + | chr8_1:71480964-71480983 | Msa1211750:CDS | 40.0% | |
| ATATGCTTGTATGTCTCTCC+AGG | - | chr8_1:71481060-71481079 | None:intergenic | 40.0% | |
| CAGACTGATGGAGTCTACTT+CGG | + | chr8_1:71479667-71479686 | Msa1211750:intron | 45.0% | |
| !! | GTCTACTTCGGTGGTCTTAT+TGG | + | chr8_1:71479679-71479698 | Msa1211750:CDS | 45.0% |
| TTATTGGGCGTGTGGCAAAT+AGG | + | chr8_1:71479695-71479714 | Msa1211750:CDS | 45.0% | |
| TGGAGGAGCTCAATTCACTT+TGG | + | chr8_1:71479720-71479739 | Msa1211750:CDS | 45.0% | |
| GGAGCTCAATTCACTTTGGA+TGG | + | chr8_1:71479724-71479743 | Msa1211750:CDS | 45.0% | |
| GTGTTCCCATGATCATTAGC+TGG | - | chr8_1:71479766-71479785 | None:intergenic | 45.0% | |
| AAATTGCAGGTGGCCAGAAA+GGG | + | chr8_1:71479903-71479922 | Msa1211750:intron | 45.0% | |
| !! | AAGGGTTCGGTGATAACGTA+TGG | + | chr8_1:71479921-71479940 | Msa1211750:CDS | 45.0% |
| ACACTTACGTCAAGCTTTCC+AGG | - | chr8_1:71480496-71480515 | None:intergenic | 45.0% | |
| ! | TGTGGGTTTGTTTACTGGCT+TGG | - | chr8_1:71480566-71480585 | None:intergenic | 45.0% |
| ! | ACTGGTGTGGGTTTGTTTAC+TGG | - | chr8_1:71480571-71480590 | None:intergenic | 45.0% |
| CAACATGCATACTGGAACCT+AGG | + | chr8_1:71480601-71480620 | Msa1211750:CDS | 45.0% | |
| ! | CTTTGGTTCATCCATCACAC+CGG | + | chr8_1:71480666-71480685 | Msa1211750:CDS | 45.0% |
| ! | CGGATTCAAGTTTGCCTGTT+GGG | - | chr8_1:71480708-71480727 | None:intergenic | 45.0% |
| ! | ACGGATTCAAGTTTGCCTGT+TGG | - | chr8_1:71480709-71480728 | None:intergenic | 45.0% |
| TGAAAGAACCTGTCTCAGGA+AGG | + | chr8_1:71480860-71480879 | Msa1211750:CDS | 45.0% | |
| ACCTGTCTCAGGAAGGAAAA+TGG | + | chr8_1:71480867-71480886 | Msa1211750:CDS | 45.0% | |
| ! | TCCATTTTCCTTCCTGAGAC+AGG | - | chr8_1:71480871-71480890 | None:intergenic | 45.0% |
| CAGGAAGGAAAATGGAGTTG+TGG | + | chr8_1:71480875-71480894 | Msa1211750:CDS | 45.0% | |
| GAGTTGTGGTCAAACCAAGT+TGG | + | chr8_1:71480889-71480908 | Msa1211750:CDS | 45.0% | |
| CAAGTATGGTGGCATTGCTT+TGG | + | chr8_1:71480975-71480994 | Msa1211750:CDS | 45.0% | |
| CAGACTGATGGAGTCTACTT+CGG | + | chr8_1:71479667-71479686 | Msa1211750:intron | 45.0% | |
| !! | GTCTACTTCGGTGGTCTTAT+TGG | + | chr8_1:71479679-71479698 | Msa1211750:CDS | 45.0% |
| TTATTGGGCGTGTGGCAAAT+AGG | + | chr8_1:71479695-71479714 | Msa1211750:CDS | 45.0% | |
| TGGAGGAGCTCAATTCACTT+TGG | + | chr8_1:71479720-71479739 | Msa1211750:CDS | 45.0% | |
| GGAGCTCAATTCACTTTGGA+TGG | + | chr8_1:71479724-71479743 | Msa1211750:CDS | 45.0% | |
| GTGTTCCCATGATCATTAGC+TGG | - | chr8_1:71479766-71479785 | None:intergenic | 45.0% | |
| AAATTGCAGGTGGCCAGAAA+GGG | + | chr8_1:71479903-71479922 | Msa1211750:intron | 45.0% | |
| !! | AAGGGTTCGGTGATAACGTA+TGG | + | chr8_1:71479921-71479940 | Msa1211750:CDS | 45.0% |
| ACACTTACGTCAAGCTTTCC+AGG | - | chr8_1:71480496-71480515 | None:intergenic | 45.0% | |
| ! | TGTGGGTTTGTTTACTGGCT+TGG | - | chr8_1:71480566-71480585 | None:intergenic | 45.0% |
| ! | ACTGGTGTGGGTTTGTTTAC+TGG | - | chr8_1:71480571-71480590 | None:intergenic | 45.0% |
| CAACATGCATACTGGAACCT+AGG | + | chr8_1:71480601-71480620 | Msa1211750:CDS | 45.0% | |
| ! | CTTTGGTTCATCCATCACAC+CGG | + | chr8_1:71480666-71480685 | Msa1211750:CDS | 45.0% |
| ! | CGGATTCAAGTTTGCCTGTT+GGG | - | chr8_1:71480708-71480727 | None:intergenic | 45.0% |
| ! | ACGGATTCAAGTTTGCCTGT+TGG | - | chr8_1:71480709-71480728 | None:intergenic | 45.0% |
| TGAAAGAACCTGTCTCAGGA+AGG | + | chr8_1:71480860-71480879 | Msa1211750:CDS | 45.0% | |
| ACCTGTCTCAGGAAGGAAAA+TGG | + | chr8_1:71480867-71480886 | Msa1211750:CDS | 45.0% | |
| ! | TCCATTTTCCTTCCTGAGAC+AGG | - | chr8_1:71480871-71480890 | None:intergenic | 45.0% |
| CAGGAAGGAAAATGGAGTTG+TGG | + | chr8_1:71480875-71480894 | Msa1211750:CDS | 45.0% | |
| GAGTTGTGGTCAAACCAAGT+TGG | + | chr8_1:71480889-71480908 | Msa1211750:CDS | 45.0% | |
| CAAGTATGGTGGCATTGCTT+TGG | + | chr8_1:71480975-71480994 | Msa1211750:CDS | 45.0% | |
| ! | ACAACATCAGCCACTTTCCC+TGG | - | chr8_1:71479425-71479444 | None:intergenic | 50.0% |
| ACTGATGGAGTCTACTTCGG+TGG | + | chr8_1:71479670-71479689 | Msa1211750:CDS | 50.0% | |
| CGTGTGGCAAATAGGATTGG+AGG | + | chr8_1:71479703-71479722 | Msa1211750:CDS | 50.0% | |
| GATCATGGGAACACACTCCA+TGG | + | chr8_1:71479772-71479791 | Msa1211750:CDS | 50.0% | |
| GAAATTGCAGGTGGCCAGAA+AGG | + | chr8_1:71479902-71479921 | Msa1211750:intron | 50.0% | |
| CGTTATCACCGAACCCTTTC+TGG | - | chr8_1:71479919-71479938 | None:intergenic | 50.0% | |
| TGTTGCTGCGACTGCGTTTA+AGG | + | chr8_1:71480124-71480143 | Msa1211750:intron | 50.0% | |
| CATGCATACTGGAACCTAGG+AGG | + | chr8_1:71480604-71480623 | Msa1211750:CDS | 50.0% | |
| !! | GGCATTGCTTTGGAGACACA+AGG | + | chr8_1:71480985-71481004 | Msa1211750:CDS | 50.0% |
| CCAGGCTTCACAATCTGAGA+TGG | - | chr8_1:71481042-71481061 | None:intergenic | 50.0% | |
| CCATCTCAGATTGTGAAGCC+TGG | + | chr8_1:71481039-71481058 | Msa1211750:CDS | 50.0% | |
| ! | ACAACATCAGCCACTTTCCC+TGG | - | chr8_1:71479425-71479444 | None:intergenic | 50.0% |
| ACTGATGGAGTCTACTTCGG+TGG | + | chr8_1:71479670-71479689 | Msa1211750:CDS | 50.0% | |
| CGTGTGGCAAATAGGATTGG+AGG | + | chr8_1:71479703-71479722 | Msa1211750:CDS | 50.0% | |
| GATCATGGGAACACACTCCA+TGG | + | chr8_1:71479772-71479791 | Msa1211750:CDS | 50.0% | |
| GAAATTGCAGGTGGCCAGAA+AGG | + | chr8_1:71479902-71479921 | Msa1211750:intron | 50.0% | |
| CGTTATCACCGAACCCTTTC+TGG | - | chr8_1:71479919-71479938 | None:intergenic | 50.0% | |
| TGTTGCTGCGACTGCGTTTA+AGG | + | chr8_1:71480124-71480143 | Msa1211750:intron | 50.0% | |
| CATGCATACTGGAACCTAGG+AGG | + | chr8_1:71480604-71480623 | Msa1211750:CDS | 50.0% | |
| !! | GGCATTGCTTTGGAGACACA+AGG | + | chr8_1:71480985-71481004 | Msa1211750:CDS | 50.0% |
| CCAGGCTTCACAATCTGAGA+TGG | - | chr8_1:71481042-71481061 | None:intergenic | 50.0% | |
| CCATCTCAGATTGTGAAGCC+TGG | + | chr8_1:71481039-71481058 | Msa1211750:CDS | 50.0% | |
| GGGCGTGTGGCAAATAGGAT+TGG | + | chr8_1:71479700-71479719 | Msa1211750:CDS | 55.0% | |
| AACCTAGGAGGCCACAACAG+TGG | + | chr8_1:71480616-71480635 | Msa1211750:CDS | 55.0% | |
| GGGCGTGTGGCAAATAGGAT+TGG | + | chr8_1:71479700-71479719 | Msa1211750:CDS | 55.0% | |
| AACCTAGGAGGCCACAACAG+TGG | + | chr8_1:71480616-71480635 | Msa1211750:CDS | 55.0% | |
| TTGTGTCCTCTTGGGGCTCC+TGG | + | chr8_1:71479177-71479196 | Msa1211750:CDS | 60.0% | |
| TGTGAACCAGGAGCCCCAAG+AGG | - | chr8_1:71479186-71479205 | None:intergenic | 60.0% | |
| !! | CGGTGGTCTTATTGGGCGTG+TGG | + | chr8_1:71479687-71479706 | Msa1211750:CDS | 60.0% |
| GCAGGTGGCCAGAAAGGGTT+CGG | + | chr8_1:71479908-71479927 | Msa1211750:intron | 60.0% | |
| CACCACTGTTGTGGCCTCCT+AGG | - | chr8_1:71480621-71480640 | None:intergenic | 60.0% | |
| TTGTGTCCTCTTGGGGCTCC+TGG | + | chr8_1:71479177-71479196 | Msa1211750:CDS | 60.0% | |
| TGTGAACCAGGAGCCCCAAG+AGG | - | chr8_1:71479186-71479205 | None:intergenic | 60.0% | |
| !! | CGGTGGTCTTATTGGGCGTG+TGG | + | chr8_1:71479687-71479706 | Msa1211750:CDS | 60.0% |
| GCAGGTGGCCAGAAAGGGTT+CGG | + | chr8_1:71479908-71479927 | Msa1211750:intron | 60.0% | |
| CACCACTGTTGTGGCCTCCT+AGG | - | chr8_1:71480621-71480640 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 71478963 | 71481288 | 71478963 | ID=Msa1211750;Name=Msa1211750 |
| chr8_1 | mRNA | 71478963 | 71481288 | 71478963 | ID=Msa1211750-mRNA-1;Parent=Msa1211750;Name=Msa1211750-mRNA-1;_AED=0.05;_eAED=0.05;_QI=191|1|1|1|0.8|0.66|6|159|358 |
| chr8_1 | exon | 71478963 | 71479337 | 71478963 | ID=Msa1211750-mRNA-1:exon:23975;Parent=Msa1211750-mRNA-1 |
| chr8_1 | exon | 71479426 | 71479475 | 71479426 | ID=Msa1211750-mRNA-1:exon:23976;Parent=Msa1211750-mRNA-1 |
| chr8_1 | exon | 71479670 | 71479793 | 71479670 | ID=Msa1211750-mRNA-1:exon:23977;Parent=Msa1211750-mRNA-1 |
| chr8_1 | exon | 71479912 | 71480010 | 71479912 | ID=Msa1211750-mRNA-1:exon:23978;Parent=Msa1211750-mRNA-1 |
| chr8_1 | exon | 71480488 | 71481138 | 71480488 | ID=Msa1211750-mRNA-1:exon:23979;Parent=Msa1211750-mRNA-1 |
| chr8_1 | exon | 71481161 | 71481288 | 71481161 | ID=Msa1211750-mRNA-1:exon:23980;Parent=Msa1211750-mRNA-1 |
| chr8_1 | five_prime_UTR | 71478963 | 71479153 | 71478963 | ID=Msa1211750-mRNA-1:five_prime_utr;Parent=Msa1211750-mRNA-1 |
| chr8_1 | CDS | 71479154 | 71479337 | 71479154 | ID=Msa1211750-mRNA-1:cds;Parent=Msa1211750-mRNA-1 |
| chr8_1 | CDS | 71479426 | 71479475 | 71479426 | ID=Msa1211750-mRNA-1:cds;Parent=Msa1211750-mRNA-1 |
| chr8_1 | CDS | 71479670 | 71479793 | 71479670 | ID=Msa1211750-mRNA-1:cds;Parent=Msa1211750-mRNA-1 |
| chr8_1 | CDS | 71479912 | 71480010 | 71479912 | ID=Msa1211750-mRNA-1:cds;Parent=Msa1211750-mRNA-1 |
| chr8_1 | CDS | 71480488 | 71481107 | 71480488 | ID=Msa1211750-mRNA-1:cds;Parent=Msa1211750-mRNA-1 |
| chr8_1 | three_prime_UTR | 71481108 | 71481138 | 71481108 | ID=Msa1211750-mRNA-1:three_prime_utr;Parent=Msa1211750-mRNA-1 |
| chr8_1 | three_prime_UTR | 71481161 | 71481288 | 71481161 | ID=Msa1211750-mRNA-1:three_prime_utr;Parent=Msa1211750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
