Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299630 | XP_039689393.1 | 98.603 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 0.0 | 726 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299630 | sp|Q5EA79|GALM_BOVIN | 41.284 | 327 | 184 | 6 | 34 | 358 | 22 | 342 | 9.24e-78 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299630 | A0A396IH88 | 98.603 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 0.0 | 726 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031510 | Msa1299630 | 0.800768 | 1.234546e-48 | -8.615850e-47 |
| Msa0126520 | Msa1299630 | 0.808498 | 3.007057e-50 | -8.615850e-47 |
| Msa1299570 | Msa1299630 | 0.995362 | 1.608208e-215 | -8.615850e-47 |
| Msa1299630 | Msa1461570 | 0.921555 | 3.078490e-88 | -8.615850e-47 |
| Msa1210120 | Msa1299630 | 0.830951 | 2.198675e-55 | -8.615850e-47 |
| Msa1211750 | Msa1299630 | 0.931453 | 3.694823e-94 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299630 | MtrunA17_Chr4g0060521 | 98.603 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 0.0 | 726 |
| Msa1299630 | MtrunA17_Chr7g0217021 | 55.367 | 354 | 153 | 2 | 7 | 355 | 4 | 357 | 9.38e-139 | 398 |
| Msa1299630 | MtrunA17_Chr6g0452991 | 51.781 | 365 | 165 | 6 | 1 | 355 | 1 | 364 | 5.17e-126 | 367 |
| Msa1299630 | MtrunA17_Chr6g0452971 | 50.137 | 365 | 171 | 6 | 1 | 355 | 1 | 364 | 8.48e-121 | 353 |
| Msa1299630 | MtrunA17_Chr6g0478501 | 46.269 | 335 | 176 | 3 | 25 | 355 | 2 | 336 | 6.77e-106 | 314 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299630 | AT3G47800.1 | 59.697 | 330 | 133 | 0 | 28 | 357 | 28 | 357 | 5.62e-149 | 424 |
| Msa1299630 | AT5G15140.1 | 57.530 | 332 | 137 | 2 | 27 | 355 | 156 | 486 | 1.80e-135 | 395 |
| Msa1299630 | AT3G17940.1 | 47.130 | 331 | 169 | 3 | 33 | 357 | 11 | 341 | 1.98e-108 | 321 |
| Msa1299630 | AT3G01260.1 | 42.331 | 326 | 159 | 7 | 34 | 355 | 122 | 422 | 3.71e-74 | 236 |
Find 102 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTTCTAATCTACGTTTA+AGG | 0.102925 | 8_3:-60924270 | None:intergenic |
| TAATCTACGTTTAAGGTTAT+TGG | 0.113160 | 8_3:-60924263 | None:intergenic |
| CGTTATCACCGAACCCTTTC+TGG | 0.147008 | 8_3:-60925166 | None:intergenic |
| ACTGGTGTGGGTTTGTTTAC+TGG | 0.147997 | 8_3:-60925820 | None:intergenic |
| GTCTACTTCGGTGGTCTTAT+TGG | 0.151365 | 8_3:+60924927 | Msa1299630:CDS |
| AAGGAAATGTCTGTTATATT+TGG | 0.171677 | 8_3:-60924221 | None:intergenic |
| TTAGGCTTATTCACAGAATC+TGG | 0.255239 | 8_3:-60926264 | None:intergenic |
| AATCACACTGTTCAAATCTT+TGG | 0.259282 | 8_3:+60925901 | Msa1299630:CDS |
| GCATGTTGTGCTAGATTTAC+TGG | 0.284935 | 8_3:-60925838 | None:intergenic |
| ATTTGACTTCCAACTTGTTT+TGG | 0.291351 | 8_3:-60926009 | None:intergenic |
| TAAGGTTATTGGATAAGTTT+AGG | 0.303289 | 8_3:-60924252 | None:intergenic |
| ACCTGTCTCAGGAAGGAAAA+TGG | 0.309640 | 8_3:+60926119 | Msa1299630:CDS |
| TCTACTTCGGTGGTCTTATT+GGG | 0.313290 | 8_3:+60924928 | Msa1299630:CDS |
| CGGATTCGAGTTTGCCTGTT+GGG | 0.319058 | 8_3:-60925957 | None:intergenic |
| ACACTTACGTCAAGCTTTCC+AGG | 0.329020 | 8_3:-60925745 | None:intergenic |
| GTTCTACATATATATCTCTA+TGG | 0.335584 | 8_3:+60924327 | Msa1299630:five_prime_UTR |
| TTGTGTCCTCTTGGGGCTCC+TGG | 0.337282 | 8_3:+60924425 | Msa1299630:CDS |
| CAAGAGGACACAAAATAATA+AGG | 0.338110 | 8_3:-60924415 | None:intergenic |
| GAAATTGGCCCCACAAAATT+CGG | 0.350538 | 8_3:-60924296 | None:intergenic |
| GAATAAAATTATATCGTGTT+TGG | 0.351335 | 8_3:-60926490 | None:intergenic |
| ACAATCTGAGATGGAAAGTT+AGG | 0.353204 | 8_3:-60926282 | None:intergenic |
| CAAGACAAACCATGTTTATC+AGG | 0.353823 | 8_3:-60924573 | None:intergenic |
| GTAGAACTGAAGGAGGAAAT+TGG | 0.358714 | 8_3:-60924311 | None:intergenic |
| GTTGCTTGAAAAGAACATAT+TGG | 0.382460 | 8_3:+60925777 | Msa1299630:CDS |
| TATCATGGTTTATCGATTCA+TGG | 0.386506 | 8_3:+60926329 | Msa1299630:CDS |
| AGGGTTAATTTGACAAACTA+TGG | 0.390776 | 8_3:+60924525 | Msa1299630:CDS |
| TTATTGGGCGTGTGGCAAAT+AGG | 0.397686 | 8_3:+60924943 | Msa1299630:CDS |
| CAAGTATGGTGGCATTGCTT+TGG | 0.405496 | 8_3:+60926227 | Msa1299630:CDS |
| TGTGGGTTTGTTTACTGGCT+TGG | 0.409918 | 8_3:-60925815 | None:intergenic |
| AGTCAAATTAATGACCTTCC+TGG | 0.412379 | 8_3:+60926024 | Msa1299630:CDS |
| TTGCTTGAAAAGAACATATT+GGG | 0.414739 | 8_3:+60925778 | Msa1299630:CDS |
| AGTGAGAAAAGTGAGAAGAT+TGG | 0.420991 | 8_3:+60924474 | Msa1299630:CDS |
| AAAGTGGCTGATGTTGTTCT+TGG | 0.422078 | 8_3:+60924676 | Msa1299630:CDS |
| ATCTAGCACAACATGCATAC+TGG | 0.440235 | 8_3:+60925845 | Msa1299630:CDS |
| CACCACTGTTGTGGCCTCCT+AGG | 0.441891 | 8_3:-60925870 | None:intergenic |
| CAACATGCATACTGGAACCT+AGG | 0.444782 | 8_3:+60925853 | Msa1299630:CDS |
| AATGATAACATTGTGTATAC+TGG | 0.450709 | 8_3:+60926465 | Msa1299630:three_prime_UTR |
| GGAGCTACATATCACAAGTA+TGG | 0.454827 | 8_3:+60926213 | Msa1299630:CDS |
| TTTGGTTTAAGGAAATCATA+TGG | 0.455507 | 8_3:-60925991 | None:intergenic |
| GAAATTGCAGGTGGCCAGAA+AGG | 0.457841 | 8_3:+60925152 | Msa1299630:intron |
| AAATTGCCAGCTAATGATCA+TGG | 0.472562 | 8_3:+60925005 | Msa1299630:CDS |
| ATCATATGGCGTGTTCTTCA+CGG | 0.473462 | 8_3:-60925977 | None:intergenic |
| GATGATAAACTCATCCCAAC+AGG | 0.473597 | 8_3:+60925943 | Msa1299630:CDS |
| TTCTTTCACTATACAAACCT+TGG | 0.474623 | 8_3:-60926097 | None:intergenic |
| TTCCTTAAACCAAAACAAGT+TGG | 0.480970 | 8_3:+60926000 | Msa1299630:CDS |
| CCATCTCAGATTGTGAAGCC+TGG | 0.483704 | 8_3:+60926291 | Msa1299630:CDS |
| TGGAGGAGCTCAATTCACTT+TGG | 0.490944 | 8_3:+60924968 | Msa1299630:CDS |
| ATATGCTTGTATGTCTCTCC+AGG | 0.492010 | 8_3:-60926309 | None:intergenic |
| GCAGGTGGCCAGAAAGGGTT+CGG | 0.495854 | 8_3:+60925158 | Msa1299630:intron |
| TGTGCTAGATTTACTGGTGT+GGG | 0.510614 | 8_3:-60925832 | None:intergenic |
| GGAGCTCAATTCACTTTGGA+TGG | 0.518150 | 8_3:+60924972 | Msa1299630:CDS |
| TATAGTATTGCAATCCAACT+TGG | 0.523209 | 8_3:-60926155 | None:intergenic |
| CCAGGCTTCACAATCTGAGA+TGG | 0.524924 | 8_3:-60926291 | None:intergenic |
| GGGCGTGTGGCAAATAGGAT+TGG | 0.526639 | 8_3:+60924948 | Msa1299630:CDS |
| AAGGGTTCGGTGATAACGTA+TGG | 0.530622 | 8_3:+60925171 | Msa1299630:CDS |
| AACTACGCAATTGACGTGAA+TGG | 0.533501 | 8_3:+60926060 | Msa1299630:CDS |
| TAGGCTTATTCACAGAATCT+GGG | 0.535737 | 8_3:-60926263 | None:intergenic |
| AGCTAAATGATGAACAAGAA+AGG | 0.538781 | 8_3:-60926411 | None:intergenic |
| TGATTCCATTGAGCAATATG+AGG | 0.542382 | 8_3:+60924702 | Msa1299630:CDS |
| GGGATGAGTTTATCATCTAC+CGG | 0.542823 | 8_3:-60925937 | None:intergenic |
| TATATATGTAGAACTGAAGG+AGG | 0.543464 | 8_3:-60924318 | None:intergenic |
| ATAGTGAAAGAACCTGTCTC+AGG | 0.544121 | 8_3:+60926108 | Msa1299630:CDS |
| GTGTTCCCATGATCATTAGC+TGG | 0.546884 | 8_3:-60925011 | None:intergenic |
| TTGTGCTAGATTTACTGGTG+TGG | 0.547703 | 8_3:-60925833 | None:intergenic |
| AAATTGCAGGTGGCCAGAAA+GGG | 0.548265 | 8_3:+60925153 | Msa1299630:intron |
| TCATACCTCATATTGCTCAA+TGG | 0.551688 | 8_3:-60924707 | None:intergenic |
| TGAAATTTGATGCAGACTGA+TGG | 0.555921 | 8_3:+60924903 | Msa1299630:intron |
| ACTGATACTAAAGGAAAGGA+TGG | 0.557269 | 8_3:+60926192 | Msa1299630:CDS |
| CGGTGGTCTTATTGGGCGTG+TGG | 0.557522 | 8_3:+60924935 | Msa1299630:CDS |
| AGATATATATGTAGAACTGA+AGG | 0.560239 | 8_3:-60924321 | None:intergenic |
| CGTGTGGCAAATAGGATTGG+AGG | 0.564047 | 8_3:+60924951 | Msa1299630:CDS |
| GAGAAATAATTGTTCAACAA+TGG | 0.565502 | 8_3:+60924383 | Msa1299630:exon |
| ACGGATTCGAGTTTGCCTGT+TGG | 0.566013 | 8_3:-60925958 | None:intergenic |
| TAATTGTTCAACAATGGCTA+AGG | 0.569688 | 8_3:+60924389 | Msa1299630:exon |
| GTTGACTGATACTAAAGGAA+AGG | 0.576122 | 8_3:+60926188 | Msa1299630:CDS |
| TTTATCATCTACCGGTGTGA+TGG | 0.578356 | 8_3:-60925929 | None:intergenic |
| GATCATGGGAACACACTCCA+TGG | 0.584348 | 8_3:+60925020 | Msa1299630:CDS |
| GGCATTGCTTTGGAGACACA+AGG | 0.585444 | 8_3:+60926237 | Msa1299630:CDS |
| AATTGCCAGCTAATGATCAT+GGG | 0.589702 | 8_3:+60925006 | Msa1299630:CDS |
| GAGTTGTGGTCAAACCAAGT+TGG | 0.590032 | 8_3:+60926141 | Msa1299630:CDS |
| AGAGACATACAAGCATATCA+TGG | 0.596154 | 8_3:+60926314 | Msa1299630:CDS |
| TGGTCAAAATCATTTAACCA+AGG | 0.602850 | 8_3:+60926080 | Msa1299630:CDS |
| CAGACTGATGGAGTCTACTT+CGG | 0.614831 | 8_3:+60924915 | Msa1299630:intron |
| TGAAAGAACCTGTCTCAGGA+AGG | 0.620515 | 8_3:+60926112 | Msa1299630:CDS |
| GTTTATGTACCTGATAAACA+TGG | 0.622676 | 8_3:+60924564 | Msa1299630:CDS |
| TTCACCATCAAAACTGTGGT+AGG | 0.630989 | 8_3:-60925234 | None:intergenic |
| GGAATGTTGACTGATACTAA+AGG | 0.631864 | 8_3:+60926183 | Msa1299630:CDS |
| TAAGAATGTCACCACTGTTG+TGG | 0.637458 | 8_3:-60925879 | None:intergenic |
| CAGGAAGGAAAATGGAGTTG+TGG | 0.640117 | 8_3:+60926127 | Msa1299630:CDS |
| GGATTGCAATACTATACTAG+TGG | 0.642698 | 8_3:+60926162 | Msa1299630:CDS |
| TAATGTCGTATAAACCAGGA+AGG | 0.653054 | 8_3:-60926038 | None:intergenic |
| TAGTTAATGTCGTATAAACC+AGG | 0.656726 | 8_3:-60926042 | None:intergenic |
| CATGCATACTGGAACCTAGG+AGG | 0.665406 | 8_3:+60925856 | Msa1299630:CDS |
| AATGTGCATAAGTGTGAACC+AGG | 0.665476 | 8_3:-60924443 | None:intergenic |
| ACTGATGGAGTCTACTTCGG+TGG | 0.669276 | 8_3:+60924918 | Msa1299630:CDS |
| GCTACATATCACAAGTATGG+TGG | 0.672659 | 8_3:+60926216 | Msa1299630:CDS |
| AACCTAGGAGGCCACAACAG+TGG | 0.673482 | 8_3:+60925868 | Msa1299630:CDS |
| CTTTGGTTCATCCATCACAC+CGG | 0.680058 | 8_3:+60925918 | Msa1299630:CDS |
| CTTGTTCACCATCAAAACTG+TGG | 0.689661 | 8_3:-60925238 | None:intergenic |
| ATGGAAAGTAGCAGTTCACA+AGG | 0.691394 | 8_3:+60925190 | Msa1299630:CDS |
| TGTGAACCAGGAGCCCCAAG+AGG | 0.695938 | 8_3:-60924431 | None:intergenic |
| ATAAGTTTAGGATTTCAACA+AGG | 0.716453 | 8_3:-60924240 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCAAAATTTAAAATCAAAA+CGG | - | chr8_3:60925577-60925596 | None:intergenic | 10.0% |
| !!! | TTCAAAATTTAAAATCAAAA+CGG | - | chr8_3:60925577-60925596 | None:intergenic | 10.0% |
| !! | TAAATATTAATGTGGAATAA+GGG | - | chr8_3:60924624-60924643 | None:intergenic | 15.0% |
| !! | ATAAATATTAATGTGGAATA+AGG | - | chr8_3:60924625-60924644 | None:intergenic | 15.0% |
| !! | AAGCTATATAAATATTAATG+TGG | - | chr8_3:60924632-60924651 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATTTACTTTTCC+AGG | + | chr8_3:60924652-60924671 | Msa1299630:intron | 15.0% |
| !!! | TTTTTTTATTTACTTTTCCA+GGG | + | chr8_3:60924653-60924672 | Msa1299630:intron | 15.0% |
| !! | TACTATATATAAGAGAAAAT+TGG | + | chr8_3:60924823-60924842 | Msa1299630:intron | 15.0% |
| !! | GAATAGTTAAATTATATATG+TGG | - | chr8_3:60925292-60925311 | None:intergenic | 15.0% |
| !! | TAAATATTAATGTGGAATAA+GGG | - | chr8_3:60924624-60924643 | None:intergenic | 15.0% |
| !! | ATAAATATTAATGTGGAATA+AGG | - | chr8_3:60924625-60924644 | None:intergenic | 15.0% |
| !! | AAGCTATATAAATATTAATG+TGG | - | chr8_3:60924632-60924651 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATTTACTTTTCC+AGG | + | chr8_3:60924652-60924671 | Msa1299630:intron | 15.0% |
| !!! | TTTTTTTATTTACTTTTCCA+GGG | + | chr8_3:60924653-60924672 | Msa1299630:intron | 15.0% |
| !! | TACTATATATAAGAGAAAAT+TGG | + | chr8_3:60924823-60924842 | Msa1299630:intron | 15.0% |
| !! | GAATAGTTAAATTATATATG+TGG | - | chr8_3:60925292-60925311 | None:intergenic | 15.0% |
| !!! | GGATTTTATGAGTTAAAAAA+AGG | + | chr8_3:60924495-60924514 | Msa1299630:CDS | 20.0% |
| !! | ATATTAATATTAACGTACCA+TGG | - | chr8_3:60925040-60925059 | None:intergenic | 20.0% |
| !! | GTTTCTGATAAATAATTTAC+AGG | + | chr8_3:60925066-60925085 | Msa1299630:intron | 20.0% |
| !! | TACGATTCTTTGTAATATTA+AGG | + | chr8_3:60925417-60925436 | Msa1299630:intron | 20.0% |
| !! | GAATAAAATTATATCGTGTT+TGG | - | chr8_3:60926493-60926512 | None:intergenic | 20.0% |
| !!! | GGATTTTATGAGTTAAAAAA+AGG | + | chr8_3:60924495-60924514 | Msa1299630:CDS | 20.0% |
| !! | ATATTAATATTAACGTACCA+TGG | - | chr8_3:60925040-60925059 | None:intergenic | 20.0% |
| !! | GTTTCTGATAAATAATTTAC+AGG | + | chr8_3:60925066-60925085 | Msa1299630:intron | 20.0% |
| !! | TACGATTCTTTGTAATATTA+AGG | + | chr8_3:60925417-60925436 | Msa1299630:intron | 20.0% |
| !! | GAATAAAATTATATCGTGTT+TGG | - | chr8_3:60926493-60926512 | None:intergenic | 20.0% |
| ! | AAGGAAATGTCTGTTATATT+TGG | - | chr8_3:60924224-60924243 | None:intergenic | 25.0% |
| !! | ATAAGTTTAGGATTTCAACA+AGG | - | chr8_3:60924243-60924262 | None:intergenic | 25.0% |
| ! | TAAGGTTATTGGATAAGTTT+AGG | - | chr8_3:60924255-60924274 | None:intergenic | 25.0% |
| !! | TAATCTACGTTTAAGGTTAT+TGG | - | chr8_3:60924266-60924285 | None:intergenic | 25.0% |
| ! | AACTTTCTAATCTACGTTTA+AGG | - | chr8_3:60924273-60924292 | None:intergenic | 25.0% |
| !! | AAAGTTAATCCGAATTTTGT+GGG | + | chr8_3:60924287-60924306 | Msa1299630:five_prime_UTR | 25.0% |
| ! | AGATATATATGTAGAACTGA+AGG | - | chr8_3:60924324-60924343 | None:intergenic | 25.0% |
| ! | GTTCTACATATATATCTCTA+TGG | + | chr8_3:60924327-60924346 | Msa1299630:five_prime_UTR | 25.0% |
| ! | GAGAAATAATTGTTCAACAA+TGG | + | chr8_3:60924383-60924402 | Msa1299630:exon | 25.0% |
| !!! | TTATTATTTTGTGTCCTCTT+GGG | + | chr8_3:60924417-60924436 | Msa1299630:CDS | 25.0% |
| !! | AGTTAAAAAAAGGAAGTATG+AGG | + | chr8_3:60924505-60924524 | Msa1299630:CDS | 25.0% |
| !! | GTTAAAAAAAGGAAGTATGA+GGG | + | chr8_3:60924506-60924525 | Msa1299630:CDS | 25.0% |
| ! | TTAATCATTGATGAAATTGC+AGG | + | chr8_3:60925140-60925159 | Msa1299630:intron | 25.0% |
| ! | AGTTAAATTATATATGTGGC+AGG | - | chr8_3:60925288-60925307 | None:intergenic | 25.0% |
| !!! | AGTTTTATTGCTACAAACAT+GGG | - | chr8_3:60925679-60925698 | None:intergenic | 25.0% |
| !!! | TAGTTTTATTGCTACAAACA+TGG | - | chr8_3:60925680-60925699 | None:intergenic | 25.0% |
| ! | TTTGCAAAATAAAACTCAAC+AGG | + | chr8_3:60925718-60925737 | Msa1299630:intron | 25.0% |
| ! | TTGCTTGAAAAGAACATATT+GGG | + | chr8_3:60925778-60925797 | Msa1299630:CDS | 25.0% |
| !! | TTTGGTTTAAGGAAATCATA+TGG | - | chr8_3:60925994-60926013 | None:intergenic | 25.0% |
| ! | AATGATAACATTGTGTATAC+TGG | + | chr8_3:60926465-60926484 | Msa1299630:three_prime_UTR | 25.0% |
| ! | AAGGAAATGTCTGTTATATT+TGG | - | chr8_3:60924224-60924243 | None:intergenic | 25.0% |
| !! | ATAAGTTTAGGATTTCAACA+AGG | - | chr8_3:60924243-60924262 | None:intergenic | 25.0% |
| ! | TAAGGTTATTGGATAAGTTT+AGG | - | chr8_3:60924255-60924274 | None:intergenic | 25.0% |
| !! | TAATCTACGTTTAAGGTTAT+TGG | - | chr8_3:60924266-60924285 | None:intergenic | 25.0% |
| ! | AACTTTCTAATCTACGTTTA+AGG | - | chr8_3:60924273-60924292 | None:intergenic | 25.0% |
| !! | AAAGTTAATCCGAATTTTGT+GGG | + | chr8_3:60924287-60924306 | Msa1299630:five_prime_UTR | 25.0% |
| ! | AGATATATATGTAGAACTGA+AGG | - | chr8_3:60924324-60924343 | None:intergenic | 25.0% |
| ! | GTTCTACATATATATCTCTA+TGG | + | chr8_3:60924327-60924346 | Msa1299630:five_prime_UTR | 25.0% |
| ! | GAGAAATAATTGTTCAACAA+TGG | + | chr8_3:60924383-60924402 | Msa1299630:exon | 25.0% |
| !!! | TTATTATTTTGTGTCCTCTT+GGG | + | chr8_3:60924417-60924436 | Msa1299630:CDS | 25.0% |
| !! | AGTTAAAAAAAGGAAGTATG+AGG | + | chr8_3:60924505-60924524 | Msa1299630:CDS | 25.0% |
| !! | GTTAAAAAAAGGAAGTATGA+GGG | + | chr8_3:60924506-60924525 | Msa1299630:CDS | 25.0% |
| ! | TTAATCATTGATGAAATTGC+AGG | + | chr8_3:60925140-60925159 | Msa1299630:intron | 25.0% |
| ! | AGTTAAATTATATATGTGGC+AGG | - | chr8_3:60925288-60925307 | None:intergenic | 25.0% |
| !!! | AGTTTTATTGCTACAAACAT+GGG | - | chr8_3:60925679-60925698 | None:intergenic | 25.0% |
| !!! | TAGTTTTATTGCTACAAACA+TGG | - | chr8_3:60925680-60925699 | None:intergenic | 25.0% |
| ! | TTTGCAAAATAAAACTCAAC+AGG | + | chr8_3:60925718-60925737 | Msa1299630:intron | 25.0% |
| ! | TTGCTTGAAAAGAACATATT+GGG | + | chr8_3:60925778-60925797 | Msa1299630:CDS | 25.0% |
| !! | TTTGGTTTAAGGAAATCATA+TGG | - | chr8_3:60925994-60926013 | None:intergenic | 25.0% |
| ! | AATGATAACATTGTGTATAC+TGG | + | chr8_3:60926465-60926484 | Msa1299630:three_prime_UTR | 25.0% |
| ! | GAAAGTTAATCCGAATTTTG+TGG | + | chr8_3:60924286-60924305 | Msa1299630:five_prime_UTR | 30.0% |
| ! | AAGTTAATCCGAATTTTGTG+GGG | + | chr8_3:60924288-60924307 | Msa1299630:five_prime_UTR | 30.0% |
| TATATATGTAGAACTGAAGG+AGG | - | chr8_3:60924321-60924340 | None:intergenic | 30.0% | |
| TAATTGTTCAACAATGGCTA+AGG | + | chr8_3:60924389-60924408 | Msa1299630:exon | 30.0% | |
| CAAGAGGACACAAAATAATA+AGG | - | chr8_3:60924418-60924437 | None:intergenic | 30.0% | |
| !! | CTTATTATTTTGTGTCCTCT+TGG | + | chr8_3:60924416-60924435 | Msa1299630:CDS | 30.0% |
| !! | TATTATTTTGTGTCCTCTTG+GGG | + | chr8_3:60924418-60924437 | Msa1299630:CDS | 30.0% |
| ! | AGGGTTAATTTGACAAACTA+TGG | + | chr8_3:60924525-60924544 | Msa1299630:CDS | 30.0% |
| GTTTATGTACCTGATAAACA+TGG | + | chr8_3:60924564-60924583 | Msa1299630:CDS | 30.0% | |
| CAAAGAATCGTATACAAATG+AGG | - | chr8_3:60925409-60925428 | None:intergenic | 30.0% | |
| !! | GTTTTATTGCTACAAACATG+GGG | - | chr8_3:60925678-60925697 | None:intergenic | 30.0% |
| GTTGCTTGAAAAGAACATAT+TGG | + | chr8_3:60925777-60925796 | Msa1299630:CDS | 30.0% | |
| AATCACACTGTTCAAATCTT+TGG | + | chr8_3:60925901-60925920 | Msa1299630:CDS | 30.0% | |
| TTCCTTAAACCAAAACAAGT+TGG | + | chr8_3:60926000-60926019 | Msa1299630:CDS | 30.0% | |
| !!! | TTCCAACTTGTTTTGGTTTA+AGG | - | chr8_3:60926005-60926024 | None:intergenic | 30.0% |
| !! | ATTTGACTTCCAACTTGTTT+TGG | - | chr8_3:60926012-60926031 | None:intergenic | 30.0% |
| TAGTTAATGTCGTATAAACC+AGG | - | chr8_3:60926045-60926064 | None:intergenic | 30.0% | |
| TGGTCAAAATCATTTAACCA+AGG | + | chr8_3:60926080-60926099 | Msa1299630:CDS | 30.0% | |
| TTCTTTCACTATACAAACCT+TGG | - | chr8_3:60926100-60926119 | None:intergenic | 30.0% | |
| TATAGTATTGCAATCCAACT+TGG | - | chr8_3:60926158-60926177 | None:intergenic | 30.0% | |
| !! | TATCATGGTTTATCGATTCA+TGG | + | chr8_3:60926329-60926348 | Msa1299630:CDS | 30.0% |
| AGCTAAATGATGAACAAGAA+AGG | - | chr8_3:60926414-60926433 | None:intergenic | 30.0% | |
| ! | GAAAGTTAATCCGAATTTTG+TGG | + | chr8_3:60924286-60924305 | Msa1299630:five_prime_UTR | 30.0% |
| ! | AAGTTAATCCGAATTTTGTG+GGG | + | chr8_3:60924288-60924307 | Msa1299630:five_prime_UTR | 30.0% |
| TATATATGTAGAACTGAAGG+AGG | - | chr8_3:60924321-60924340 | None:intergenic | 30.0% | |
| TAATTGTTCAACAATGGCTA+AGG | + | chr8_3:60924389-60924408 | Msa1299630:exon | 30.0% | |
| CAAGAGGACACAAAATAATA+AGG | - | chr8_3:60924418-60924437 | None:intergenic | 30.0% | |
| !! | CTTATTATTTTGTGTCCTCT+TGG | + | chr8_3:60924416-60924435 | Msa1299630:CDS | 30.0% |
| !! | TATTATTTTGTGTCCTCTTG+GGG | + | chr8_3:60924418-60924437 | Msa1299630:CDS | 30.0% |
| ! | AGGGTTAATTTGACAAACTA+TGG | + | chr8_3:60924525-60924544 | Msa1299630:CDS | 30.0% |
| GTTTATGTACCTGATAAACA+TGG | + | chr8_3:60924564-60924583 | Msa1299630:CDS | 30.0% | |
| CAAAGAATCGTATACAAATG+AGG | - | chr8_3:60925409-60925428 | None:intergenic | 30.0% | |
| !! | GTTTTATTGCTACAAACATG+GGG | - | chr8_3:60925678-60925697 | None:intergenic | 30.0% |
| GTTGCTTGAAAAGAACATAT+TGG | + | chr8_3:60925777-60925796 | Msa1299630:CDS | 30.0% | |
| AATCACACTGTTCAAATCTT+TGG | + | chr8_3:60925901-60925920 | Msa1299630:CDS | 30.0% | |
| TTCCTTAAACCAAAACAAGT+TGG | + | chr8_3:60926000-60926019 | Msa1299630:CDS | 30.0% | |
| !!! | TTCCAACTTGTTTTGGTTTA+AGG | - | chr8_3:60926005-60926024 | None:intergenic | 30.0% |
| !! | ATTTGACTTCCAACTTGTTT+TGG | - | chr8_3:60926012-60926031 | None:intergenic | 30.0% |
| TAGTTAATGTCGTATAAACC+AGG | - | chr8_3:60926045-60926064 | None:intergenic | 30.0% | |
| TGGTCAAAATCATTTAACCA+AGG | + | chr8_3:60926080-60926099 | Msa1299630:CDS | 30.0% | |
| TTCTTTCACTATACAAACCT+TGG | - | chr8_3:60926100-60926119 | None:intergenic | 30.0% | |
| TATAGTATTGCAATCCAACT+TGG | - | chr8_3:60926158-60926177 | None:intergenic | 30.0% | |
| !! | TATCATGGTTTATCGATTCA+TGG | + | chr8_3:60926329-60926348 | Msa1299630:CDS | 30.0% |
| AGCTAAATGATGAACAAGAA+AGG | - | chr8_3:60926414-60926433 | None:intergenic | 30.0% | |
| AGTGAGAAAAGTGAGAAGAT+TGG | + | chr8_3:60924474-60924493 | Msa1299630:CDS | 35.0% | |
| CAAGACAAACCATGTTTATC+AGG | - | chr8_3:60924576-60924595 | None:intergenic | 35.0% | |
| !! | ATTTACTTTTCCAGGGAAAG+TGG | + | chr8_3:60924660-60924679 | Msa1299630:intron | 35.0% |
| TGATTCCATTGAGCAATATG+AGG | + | chr8_3:60924702-60924721 | Msa1299630:CDS | 35.0% | |
| TCATACCTCATATTGCTCAA+TGG | - | chr8_3:60924710-60924729 | None:intergenic | 35.0% | |
| ! | GGATCAATAGTTGATGCATT+TGG | + | chr8_3:60924844-60924863 | Msa1299630:intron | 35.0% |
| ! | ATGCATTTGGTTCAAATCGT+GGG | + | chr8_3:60924857-60924876 | Msa1299630:intron | 35.0% |
| TGAAATTTGATGCAGACTGA+TGG | + | chr8_3:60924903-60924922 | Msa1299630:intron | 35.0% | |
| AAATTGCCAGCTAATGATCA+TGG | + | chr8_3:60925005-60925024 | Msa1299630:CDS | 35.0% | |
| AATTGCCAGCTAATGATCAT+GGG | + | chr8_3:60925006-60925025 | Msa1299630:CDS | 35.0% | |
| ATCATTGATGAAATTGCAGG+TGG | + | chr8_3:60925143-60925162 | Msa1299630:intron | 35.0% | |
| !! | TTTACCTACCACAGTTTTGA+TGG | + | chr8_3:60925230-60925249 | Msa1299630:CDS | 35.0% |
| GTACTAACGGTGTGAATTTA+GGG | - | chr8_3:60925532-60925551 | None:intergenic | 35.0% | |
| TGTACTAACGGTGTGAATTT+AGG | - | chr8_3:60925533-60925552 | None:intergenic | 35.0% | |
| ! | CATATTGCATTGGTGATTGT+TGG | - | chr8_3:60925646-60925665 | None:intergenic | 35.0% |
| ! | TAAAACTCAACAGGTTTTCC+TGG | + | chr8_3:60925727-60925746 | Msa1299630:intron | 35.0% |
| AGTCAAATTAATGACCTTCC+TGG | + | chr8_3:60926024-60926043 | Msa1299630:CDS | 35.0% | |
| TAATGTCGTATAAACCAGGA+AGG | - | chr8_3:60926041-60926060 | None:intergenic | 35.0% | |
| GGATTGCAATACTATACTAG+TGG | + | chr8_3:60926162-60926181 | Msa1299630:CDS | 35.0% | |
| ! | GGAATGTTGACTGATACTAA+AGG | + | chr8_3:60926183-60926202 | Msa1299630:CDS | 35.0% |
| GTTGACTGATACTAAAGGAA+AGG | + | chr8_3:60926188-60926207 | Msa1299630:CDS | 35.0% | |
| ACTGATACTAAAGGAAAGGA+TGG | + | chr8_3:60926192-60926211 | Msa1299630:CDS | 35.0% | |
| TAGGCTTATTCACAGAATCT+GGG | - | chr8_3:60926266-60926285 | None:intergenic | 35.0% | |
| TTAGGCTTATTCACAGAATC+TGG | - | chr8_3:60926267-60926286 | None:intergenic | 35.0% | |
| ! | ACAATCTGAGATGGAAAGTT+AGG | - | chr8_3:60926285-60926304 | None:intergenic | 35.0% |
| AGAGACATACAAGCATATCA+TGG | + | chr8_3:60926314-60926333 | Msa1299630:CDS | 35.0% | |
| AGTGAGAAAAGTGAGAAGAT+TGG | + | chr8_3:60924474-60924493 | Msa1299630:CDS | 35.0% | |
| CAAGACAAACCATGTTTATC+AGG | - | chr8_3:60924576-60924595 | None:intergenic | 35.0% | |
| !! | ATTTACTTTTCCAGGGAAAG+TGG | + | chr8_3:60924660-60924679 | Msa1299630:intron | 35.0% |
| TGATTCCATTGAGCAATATG+AGG | + | chr8_3:60924702-60924721 | Msa1299630:CDS | 35.0% | |
| TCATACCTCATATTGCTCAA+TGG | - | chr8_3:60924710-60924729 | None:intergenic | 35.0% | |
| ! | GGATCAATAGTTGATGCATT+TGG | + | chr8_3:60924844-60924863 | Msa1299630:intron | 35.0% |
| ! | ATGCATTTGGTTCAAATCGT+GGG | + | chr8_3:60924857-60924876 | Msa1299630:intron | 35.0% |
| TGAAATTTGATGCAGACTGA+TGG | + | chr8_3:60924903-60924922 | Msa1299630:intron | 35.0% | |
| AAATTGCCAGCTAATGATCA+TGG | + | chr8_3:60925005-60925024 | Msa1299630:CDS | 35.0% | |
| AATTGCCAGCTAATGATCAT+GGG | + | chr8_3:60925006-60925025 | Msa1299630:CDS | 35.0% | |
| ATCATTGATGAAATTGCAGG+TGG | + | chr8_3:60925143-60925162 | Msa1299630:intron | 35.0% | |
| !! | TTTACCTACCACAGTTTTGA+TGG | + | chr8_3:60925230-60925249 | Msa1299630:CDS | 35.0% |
| GTACTAACGGTGTGAATTTA+GGG | - | chr8_3:60925532-60925551 | None:intergenic | 35.0% | |
| TGTACTAACGGTGTGAATTT+AGG | - | chr8_3:60925533-60925552 | None:intergenic | 35.0% | |
| ! | CATATTGCATTGGTGATTGT+TGG | - | chr8_3:60925646-60925665 | None:intergenic | 35.0% |
| ! | TAAAACTCAACAGGTTTTCC+TGG | + | chr8_3:60925727-60925746 | Msa1299630:intron | 35.0% |
| AGTCAAATTAATGACCTTCC+TGG | + | chr8_3:60926024-60926043 | Msa1299630:CDS | 35.0% | |
| TAATGTCGTATAAACCAGGA+AGG | - | chr8_3:60926041-60926060 | None:intergenic | 35.0% | |
| GGATTGCAATACTATACTAG+TGG | + | chr8_3:60926162-60926181 | Msa1299630:CDS | 35.0% | |
| ! | GGAATGTTGACTGATACTAA+AGG | + | chr8_3:60926183-60926202 | Msa1299630:CDS | 35.0% |
| GTTGACTGATACTAAAGGAA+AGG | + | chr8_3:60926188-60926207 | Msa1299630:CDS | 35.0% | |
| ACTGATACTAAAGGAAAGGA+TGG | + | chr8_3:60926192-60926211 | Msa1299630:CDS | 35.0% | |
| TAGGCTTATTCACAGAATCT+GGG | - | chr8_3:60926266-60926285 | None:intergenic | 35.0% | |
| TTAGGCTTATTCACAGAATC+TGG | - | chr8_3:60926267-60926286 | None:intergenic | 35.0% | |
| ! | ACAATCTGAGATGGAAAGTT+AGG | - | chr8_3:60926285-60926304 | None:intergenic | 35.0% |
| AGAGACATACAAGCATATCA+TGG | + | chr8_3:60926314-60926333 | Msa1299630:CDS | 35.0% | |
| GAAATTGGCCCCACAAAATT+CGG | - | chr8_3:60924299-60924318 | None:intergenic | 40.0% | |
| GTAGAACTGAAGGAGGAAAT+TGG | - | chr8_3:60924314-60924333 | None:intergenic | 40.0% | |
| AATGTGCATAAGTGTGAACC+AGG | - | chr8_3:60924446-60924465 | None:intergenic | 40.0% | |
| AAAGTGGCTGATGTTGTTCT+TGG | + | chr8_3:60924676-60924695 | Msa1299630:CDS | 40.0% | |
| ! | GATGCATTTGGTTCAAATCG+TGG | + | chr8_3:60924856-60924875 | Msa1299630:intron | 40.0% |
| !! | TCTACTTCGGTGGTCTTATT+GGG | + | chr8_3:60924928-60924947 | Msa1299630:CDS | 40.0% |
| ATGGAAAGTAGCAGTTCACA+AGG | + | chr8_3:60925190-60925209 | Msa1299630:CDS | 40.0% | |
| TTCACCATCAAAACTGTGGT+AGG | - | chr8_3:60925237-60925256 | None:intergenic | 40.0% | |
| CTTGTTCACCATCAAAACTG+TGG | - | chr8_3:60925241-60925260 | None:intergenic | 40.0% | |
| !!! | CACAGTTTTGATGGTGAACA+AGG | + | chr8_3:60925239-60925258 | Msa1299630:CDS | 40.0% |
| GTATACAAATGAGGCTGATG+TGG | - | chr8_3:60925400-60925419 | None:intergenic | 40.0% | |
| GTTACCACAATCGAAAACCT+TGG | + | chr8_3:60925455-60925474 | Msa1299630:intron | 40.0% | |
| ! | ACAACCAAGGTTTTCGATTG+TGG | - | chr8_3:60925462-60925481 | None:intergenic | 40.0% |
| !! | CTTGGTTGTTCGTTTTAGCA+CGG | + | chr8_3:60925473-60925492 | Msa1299630:intron | 40.0% |
| GACAGTCATCGATGTACTAA+CGG | - | chr8_3:60925545-60925564 | None:intergenic | 40.0% | |
| GCTGCATCAACATATTGCAT+TGG | - | chr8_3:60925656-60925675 | None:intergenic | 40.0% | |
| TGTGCTAGATTTACTGGTGT+GGG | - | chr8_3:60925835-60925854 | None:intergenic | 40.0% | |
| TTGTGCTAGATTTACTGGTG+TGG | - | chr8_3:60925836-60925855 | None:intergenic | 40.0% | |
| GCATGTTGTGCTAGATTTAC+TGG | - | chr8_3:60925841-60925860 | None:intergenic | 40.0% | |
| ATCTAGCACAACATGCATAC+TGG | + | chr8_3:60925845-60925864 | Msa1299630:CDS | 40.0% | |
| TAAGAATGTCACCACTGTTG+TGG | - | chr8_3:60925882-60925901 | None:intergenic | 40.0% | |
| TTTATCATCTACCGGTGTGA+TGG | - | chr8_3:60925932-60925951 | None:intergenic | 40.0% | |
| GGGATGAGTTTATCATCTAC+CGG | - | chr8_3:60925940-60925959 | None:intergenic | 40.0% | |
| GATGATAAACTCATCCCAAC+AGG | + | chr8_3:60925943-60925962 | Msa1299630:CDS | 40.0% | |
| ATCATATGGCGTGTTCTTCA+CGG | - | chr8_3:60925980-60925999 | None:intergenic | 40.0% | |
| AACTACGCAATTGACGTGAA+TGG | + | chr8_3:60926060-60926079 | Msa1299630:CDS | 40.0% | |
| ATAGTGAAAGAACCTGTCTC+AGG | + | chr8_3:60926108-60926127 | Msa1299630:CDS | 40.0% | |
| GGAGCTACATATCACAAGTA+TGG | + | chr8_3:60926213-60926232 | Msa1299630:CDS | 40.0% | |
| GCTACATATCACAAGTATGG+TGG | + | chr8_3:60926216-60926235 | Msa1299630:CDS | 40.0% | |
| ATATGCTTGTATGTCTCTCC+AGG | - | chr8_3:60926312-60926331 | None:intergenic | 40.0% | |
| GAAATTGGCCCCACAAAATT+CGG | - | chr8_3:60924299-60924318 | None:intergenic | 40.0% | |
| GTAGAACTGAAGGAGGAAAT+TGG | - | chr8_3:60924314-60924333 | None:intergenic | 40.0% | |
| AATGTGCATAAGTGTGAACC+AGG | - | chr8_3:60924446-60924465 | None:intergenic | 40.0% | |
| AAAGTGGCTGATGTTGTTCT+TGG | + | chr8_3:60924676-60924695 | Msa1299630:CDS | 40.0% | |
| ! | GATGCATTTGGTTCAAATCG+TGG | + | chr8_3:60924856-60924875 | Msa1299630:intron | 40.0% |
| !! | TCTACTTCGGTGGTCTTATT+GGG | + | chr8_3:60924928-60924947 | Msa1299630:CDS | 40.0% |
| ATGGAAAGTAGCAGTTCACA+AGG | + | chr8_3:60925190-60925209 | Msa1299630:CDS | 40.0% | |
| TTCACCATCAAAACTGTGGT+AGG | - | chr8_3:60925237-60925256 | None:intergenic | 40.0% | |
| CTTGTTCACCATCAAAACTG+TGG | - | chr8_3:60925241-60925260 | None:intergenic | 40.0% | |
| !!! | CACAGTTTTGATGGTGAACA+AGG | + | chr8_3:60925239-60925258 | Msa1299630:CDS | 40.0% |
| GTATACAAATGAGGCTGATG+TGG | - | chr8_3:60925400-60925419 | None:intergenic | 40.0% | |
| GTTACCACAATCGAAAACCT+TGG | + | chr8_3:60925455-60925474 | Msa1299630:intron | 40.0% | |
| ! | ACAACCAAGGTTTTCGATTG+TGG | - | chr8_3:60925462-60925481 | None:intergenic | 40.0% |
| !! | CTTGGTTGTTCGTTTTAGCA+CGG | + | chr8_3:60925473-60925492 | Msa1299630:intron | 40.0% |
| GACAGTCATCGATGTACTAA+CGG | - | chr8_3:60925545-60925564 | None:intergenic | 40.0% | |
| GCTGCATCAACATATTGCAT+TGG | - | chr8_3:60925656-60925675 | None:intergenic | 40.0% | |
| TGTGCTAGATTTACTGGTGT+GGG | - | chr8_3:60925835-60925854 | None:intergenic | 40.0% | |
| TTGTGCTAGATTTACTGGTG+TGG | - | chr8_3:60925836-60925855 | None:intergenic | 40.0% | |
| GCATGTTGTGCTAGATTTAC+TGG | - | chr8_3:60925841-60925860 | None:intergenic | 40.0% | |
| ATCTAGCACAACATGCATAC+TGG | + | chr8_3:60925845-60925864 | Msa1299630:CDS | 40.0% | |
| TAAGAATGTCACCACTGTTG+TGG | - | chr8_3:60925882-60925901 | None:intergenic | 40.0% | |
| TTTATCATCTACCGGTGTGA+TGG | - | chr8_3:60925932-60925951 | None:intergenic | 40.0% | |
| GGGATGAGTTTATCATCTAC+CGG | - | chr8_3:60925940-60925959 | None:intergenic | 40.0% | |
| GATGATAAACTCATCCCAAC+AGG | + | chr8_3:60925943-60925962 | Msa1299630:CDS | 40.0% | |
| ATCATATGGCGTGTTCTTCA+CGG | - | chr8_3:60925980-60925999 | None:intergenic | 40.0% | |
| AACTACGCAATTGACGTGAA+TGG | + | chr8_3:60926060-60926079 | Msa1299630:CDS | 40.0% | |
| ATAGTGAAAGAACCTGTCTC+AGG | + | chr8_3:60926108-60926127 | Msa1299630:CDS | 40.0% | |
| GGAGCTACATATCACAAGTA+TGG | + | chr8_3:60926213-60926232 | Msa1299630:CDS | 40.0% | |
| GCTACATATCACAAGTATGG+TGG | + | chr8_3:60926216-60926235 | Msa1299630:CDS | 40.0% | |
| ATATGCTTGTATGTCTCTCC+AGG | - | chr8_3:60926312-60926331 | None:intergenic | 40.0% | |
| CAGACTGATGGAGTCTACTT+CGG | + | chr8_3:60924915-60924934 | Msa1299630:intron | 45.0% | |
| !! | GTCTACTTCGGTGGTCTTAT+TGG | + | chr8_3:60924927-60924946 | Msa1299630:CDS | 45.0% |
| TTATTGGGCGTGTGGCAAAT+AGG | + | chr8_3:60924943-60924962 | Msa1299630:CDS | 45.0% | |
| TGGAGGAGCTCAATTCACTT+TGG | + | chr8_3:60924968-60924987 | Msa1299630:CDS | 45.0% | |
| GGAGCTCAATTCACTTTGGA+TGG | + | chr8_3:60924972-60924991 | Msa1299630:CDS | 45.0% | |
| GTGTTCCCATGATCATTAGC+TGG | - | chr8_3:60925014-60925033 | None:intergenic | 45.0% | |
| AAATTGCAGGTGGCCAGAAA+GGG | + | chr8_3:60925153-60925172 | Msa1299630:intron | 45.0% | |
| !! | AAGGGTTCGGTGATAACGTA+TGG | + | chr8_3:60925171-60925190 | Msa1299630:CDS | 45.0% |
| CGTGCTAAAACGAACAACCA+AGG | - | chr8_3:60925475-60925494 | None:intergenic | 45.0% | |
| ACACTTACGTCAAGCTTTCC+AGG | - | chr8_3:60925748-60925767 | None:intergenic | 45.0% | |
| ! | TGTGGGTTTGTTTACTGGCT+TGG | - | chr8_3:60925818-60925837 | None:intergenic | 45.0% |
| ! | ACTGGTGTGGGTTTGTTTAC+TGG | - | chr8_3:60925823-60925842 | None:intergenic | 45.0% |
| CAACATGCATACTGGAACCT+AGG | + | chr8_3:60925853-60925872 | Msa1299630:CDS | 45.0% | |
| ! | CTTTGGTTCATCCATCACAC+CGG | + | chr8_3:60925918-60925937 | Msa1299630:CDS | 45.0% |
| TGAAAGAACCTGTCTCAGGA+AGG | + | chr8_3:60926112-60926131 | Msa1299630:CDS | 45.0% | |
| ACCTGTCTCAGGAAGGAAAA+TGG | + | chr8_3:60926119-60926138 | Msa1299630:CDS | 45.0% | |
| ! | TCCATTTTCCTTCCTGAGAC+AGG | - | chr8_3:60926123-60926142 | None:intergenic | 45.0% |
| CAGGAAGGAAAATGGAGTTG+TGG | + | chr8_3:60926127-60926146 | Msa1299630:CDS | 45.0% | |
| GAGTTGTGGTCAAACCAAGT+TGG | + | chr8_3:60926141-60926160 | Msa1299630:CDS | 45.0% | |
| CAAGTATGGTGGCATTGCTT+TGG | + | chr8_3:60926227-60926246 | Msa1299630:CDS | 45.0% | |
| CAGACTGATGGAGTCTACTT+CGG | + | chr8_3:60924915-60924934 | Msa1299630:intron | 45.0% | |
| !! | GTCTACTTCGGTGGTCTTAT+TGG | + | chr8_3:60924927-60924946 | Msa1299630:CDS | 45.0% |
| TTATTGGGCGTGTGGCAAAT+AGG | + | chr8_3:60924943-60924962 | Msa1299630:CDS | 45.0% | |
| TGGAGGAGCTCAATTCACTT+TGG | + | chr8_3:60924968-60924987 | Msa1299630:CDS | 45.0% | |
| GGAGCTCAATTCACTTTGGA+TGG | + | chr8_3:60924972-60924991 | Msa1299630:CDS | 45.0% | |
| GTGTTCCCATGATCATTAGC+TGG | - | chr8_3:60925014-60925033 | None:intergenic | 45.0% | |
| AAATTGCAGGTGGCCAGAAA+GGG | + | chr8_3:60925153-60925172 | Msa1299630:intron | 45.0% | |
| !! | AAGGGTTCGGTGATAACGTA+TGG | + | chr8_3:60925171-60925190 | Msa1299630:CDS | 45.0% |
| CGTGCTAAAACGAACAACCA+AGG | - | chr8_3:60925475-60925494 | None:intergenic | 45.0% | |
| ACACTTACGTCAAGCTTTCC+AGG | - | chr8_3:60925748-60925767 | None:intergenic | 45.0% | |
| ! | TGTGGGTTTGTTTACTGGCT+TGG | - | chr8_3:60925818-60925837 | None:intergenic | 45.0% |
| ! | ACTGGTGTGGGTTTGTTTAC+TGG | - | chr8_3:60925823-60925842 | None:intergenic | 45.0% |
| CAACATGCATACTGGAACCT+AGG | + | chr8_3:60925853-60925872 | Msa1299630:CDS | 45.0% | |
| ! | CTTTGGTTCATCCATCACAC+CGG | + | chr8_3:60925918-60925937 | Msa1299630:CDS | 45.0% |
| TGAAAGAACCTGTCTCAGGA+AGG | + | chr8_3:60926112-60926131 | Msa1299630:CDS | 45.0% | |
| ACCTGTCTCAGGAAGGAAAA+TGG | + | chr8_3:60926119-60926138 | Msa1299630:CDS | 45.0% | |
| ! | TCCATTTTCCTTCCTGAGAC+AGG | - | chr8_3:60926123-60926142 | None:intergenic | 45.0% |
| CAGGAAGGAAAATGGAGTTG+TGG | + | chr8_3:60926127-60926146 | Msa1299630:CDS | 45.0% | |
| GAGTTGTGGTCAAACCAAGT+TGG | + | chr8_3:60926141-60926160 | Msa1299630:CDS | 45.0% | |
| CAAGTATGGTGGCATTGCTT+TGG | + | chr8_3:60926227-60926246 | Msa1299630:CDS | 45.0% | |
| ! | ACAACATCAGCCACTTTCCC+TGG | - | chr8_3:60924673-60924692 | None:intergenic | 50.0% |
| ACTGATGGAGTCTACTTCGG+TGG | + | chr8_3:60924918-60924937 | Msa1299630:CDS | 50.0% | |
| CGTGTGGCAAATAGGATTGG+AGG | + | chr8_3:60924951-60924970 | Msa1299630:CDS | 50.0% | |
| GATCATGGGAACACACTCCA+TGG | + | chr8_3:60925020-60925039 | Msa1299630:CDS | 50.0% | |
| GAAATTGCAGGTGGCCAGAA+AGG | + | chr8_3:60925152-60925171 | Msa1299630:intron | 50.0% | |
| CGTTATCACCGAACCCTTTC+TGG | - | chr8_3:60925169-60925188 | None:intergenic | 50.0% | |
| TGTTGCTGCGACTGCGTTTA+AGG | + | chr8_3:60925374-60925393 | Msa1299630:intron | 50.0% | |
| CATGCATACTGGAACCTAGG+AGG | + | chr8_3:60925856-60925875 | Msa1299630:CDS | 50.0% | |
| ! | CGGATTCGAGTTTGCCTGTT+GGG | - | chr8_3:60925960-60925979 | None:intergenic | 50.0% |
| ! | ACGGATTCGAGTTTGCCTGT+TGG | - | chr8_3:60925961-60925980 | None:intergenic | 50.0% |
| !! | GGCATTGCTTTGGAGACACA+AGG | + | chr8_3:60926237-60926256 | Msa1299630:CDS | 50.0% |
| CCAGGCTTCACAATCTGAGA+TGG | - | chr8_3:60926294-60926313 | None:intergenic | 50.0% | |
| CCATCTCAGATTGTGAAGCC+TGG | + | chr8_3:60926291-60926310 | Msa1299630:CDS | 50.0% | |
| ! | ACAACATCAGCCACTTTCCC+TGG | - | chr8_3:60924673-60924692 | None:intergenic | 50.0% |
| ACTGATGGAGTCTACTTCGG+TGG | + | chr8_3:60924918-60924937 | Msa1299630:CDS | 50.0% | |
| CGTGTGGCAAATAGGATTGG+AGG | + | chr8_3:60924951-60924970 | Msa1299630:CDS | 50.0% | |
| GATCATGGGAACACACTCCA+TGG | + | chr8_3:60925020-60925039 | Msa1299630:CDS | 50.0% | |
| GAAATTGCAGGTGGCCAGAA+AGG | + | chr8_3:60925152-60925171 | Msa1299630:intron | 50.0% | |
| CGTTATCACCGAACCCTTTC+TGG | - | chr8_3:60925169-60925188 | None:intergenic | 50.0% | |
| TGTTGCTGCGACTGCGTTTA+AGG | + | chr8_3:60925374-60925393 | Msa1299630:intron | 50.0% | |
| CATGCATACTGGAACCTAGG+AGG | + | chr8_3:60925856-60925875 | Msa1299630:CDS | 50.0% | |
| ! | CGGATTCGAGTTTGCCTGTT+GGG | - | chr8_3:60925960-60925979 | None:intergenic | 50.0% |
| ! | ACGGATTCGAGTTTGCCTGT+TGG | - | chr8_3:60925961-60925980 | None:intergenic | 50.0% |
| !! | GGCATTGCTTTGGAGACACA+AGG | + | chr8_3:60926237-60926256 | Msa1299630:CDS | 50.0% |
| CCAGGCTTCACAATCTGAGA+TGG | - | chr8_3:60926294-60926313 | None:intergenic | 50.0% | |
| CCATCTCAGATTGTGAAGCC+TGG | + | chr8_3:60926291-60926310 | Msa1299630:CDS | 50.0% | |
| GGGCGTGTGGCAAATAGGAT+TGG | + | chr8_3:60924948-60924967 | Msa1299630:CDS | 55.0% | |
| AACCTAGGAGGCCACAACAG+TGG | + | chr8_3:60925868-60925887 | Msa1299630:CDS | 55.0% | |
| GGGCGTGTGGCAAATAGGAT+TGG | + | chr8_3:60924948-60924967 | Msa1299630:CDS | 55.0% | |
| AACCTAGGAGGCCACAACAG+TGG | + | chr8_3:60925868-60925887 | Msa1299630:CDS | 55.0% | |
| TTGTGTCCTCTTGGGGCTCC+TGG | + | chr8_3:60924425-60924444 | Msa1299630:CDS | 60.0% | |
| TGTGAACCAGGAGCCCCAAG+AGG | - | chr8_3:60924434-60924453 | None:intergenic | 60.0% | |
| !! | CGGTGGTCTTATTGGGCGTG+TGG | + | chr8_3:60924935-60924954 | Msa1299630:CDS | 60.0% |
| GCAGGTGGCCAGAAAGGGTT+CGG | + | chr8_3:60925158-60925177 | Msa1299630:intron | 60.0% | |
| CACCACTGTTGTGGCCTCCT+AGG | - | chr8_3:60925873-60925892 | None:intergenic | 60.0% | |
| TTGTGTCCTCTTGGGGCTCC+TGG | + | chr8_3:60924425-60924444 | Msa1299630:CDS | 60.0% | |
| TGTGAACCAGGAGCCCCAAG+AGG | - | chr8_3:60924434-60924453 | None:intergenic | 60.0% | |
| !! | CGGTGGTCTTATTGGGCGTG+TGG | + | chr8_3:60924935-60924954 | Msa1299630:CDS | 60.0% |
| GCAGGTGGCCAGAAAGGGTT+CGG | + | chr8_3:60925158-60925177 | Msa1299630:intron | 60.0% | |
| CACCACTGTTGTGGCCTCCT+AGG | - | chr8_3:60925873-60925892 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 60924211 | 60926517 | 60924211 | ID=Msa1299630;Name=Msa1299630 |
| chr8_3 | mRNA | 60924211 | 60926517 | 60924211 | ID=Msa1299630-mRNA-1;Parent=Msa1299630;Name=Msa1299630-mRNA-1;_AED=0.05;_eAED=0.05;_QI=191|1|1|1|1|1|5|158|358 |
| chr8_3 | exon | 60924211 | 60924585 | 60924211 | ID=Msa1299630-mRNA-1:exon:17876;Parent=Msa1299630-mRNA-1 |
| chr8_3 | exon | 60924674 | 60924723 | 60924674 | ID=Msa1299630-mRNA-1:exon:17877;Parent=Msa1299630-mRNA-1 |
| chr8_3 | exon | 60924918 | 60925041 | 60924918 | ID=Msa1299630-mRNA-1:exon:17878;Parent=Msa1299630-mRNA-1 |
| chr8_3 | exon | 60925162 | 60925260 | 60925162 | ID=Msa1299630-mRNA-1:exon:17879;Parent=Msa1299630-mRNA-1 |
| chr8_3 | exon | 60925740 | 60926517 | 60925740 | ID=Msa1299630-mRNA-1:exon:17880;Parent=Msa1299630-mRNA-1 |
| chr8_3 | five_prime_UTR | 60924211 | 60924401 | 60924211 | ID=Msa1299630-mRNA-1:five_prime_utr;Parent=Msa1299630-mRNA-1 |
| chr8_3 | CDS | 60924402 | 60924585 | 60924402 | ID=Msa1299630-mRNA-1:cds;Parent=Msa1299630-mRNA-1 |
| chr8_3 | CDS | 60924674 | 60924723 | 60924674 | ID=Msa1299630-mRNA-1:cds;Parent=Msa1299630-mRNA-1 |
| chr8_3 | CDS | 60924918 | 60925041 | 60924918 | ID=Msa1299630-mRNA-1:cds;Parent=Msa1299630-mRNA-1 |
| chr8_3 | CDS | 60925162 | 60925260 | 60925162 | ID=Msa1299630-mRNA-1:cds;Parent=Msa1299630-mRNA-1 |
| chr8_3 | CDS | 60925740 | 60926359 | 60925740 | ID=Msa1299630-mRNA-1:cds;Parent=Msa1299630-mRNA-1 |
| chr8_3 | three_prime_UTR | 60926360 | 60926517 | 60926360 | ID=Msa1299630-mRNA-1:three_prime_utr;Parent=Msa1299630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
