Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299570 | XP_039689393.1 | 98.603 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 0.0 | 726 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299570 | sp|Q5EA79|GALM_BOVIN | 41.284 | 327 | 184 | 6 | 34 | 358 | 22 | 342 | 9.24e-78 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299570 | A0A396IH88 | 98.603 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 0.0 | 726 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0126520 | Msa1299570 | 0.807798 | 4.239584e-50 | -8.615850e-47 |
| Msa1299570 | Msa1299630 | 0.995362 | 1.608208e-215 | -8.615850e-47 |
| Msa1299570 | Msa1461570 | 0.926936 | 2.358948e-91 | -8.615850e-47 |
| Msa1210120 | Msa1299570 | 0.834174 | 3.490021e-56 | -8.615850e-47 |
| Msa1211750 | Msa1299570 | 0.934689 | 2.735636e-96 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299570 | MtrunA17_Chr4g0060521 | 98.603 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 0.0 | 726 |
| Msa1299570 | MtrunA17_Chr7g0217021 | 55.367 | 354 | 153 | 2 | 7 | 355 | 4 | 357 | 9.38e-139 | 398 |
| Msa1299570 | MtrunA17_Chr6g0452991 | 51.781 | 365 | 165 | 6 | 1 | 355 | 1 | 364 | 5.17e-126 | 367 |
| Msa1299570 | MtrunA17_Chr6g0452971 | 50.137 | 365 | 171 | 6 | 1 | 355 | 1 | 364 | 8.48e-121 | 353 |
| Msa1299570 | MtrunA17_Chr6g0478501 | 46.269 | 335 | 176 | 3 | 25 | 355 | 2 | 336 | 6.77e-106 | 314 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299570 | AT3G47800.1 | 59.697 | 330 | 133 | 0 | 28 | 357 | 28 | 357 | 5.62e-149 | 424 |
| Msa1299570 | AT5G15140.1 | 57.530 | 332 | 137 | 2 | 27 | 355 | 156 | 486 | 1.80e-135 | 395 |
| Msa1299570 | AT3G17940.1 | 47.130 | 331 | 169 | 3 | 33 | 357 | 11 | 341 | 1.98e-108 | 321 |
| Msa1299570 | AT3G01260.1 | 42.331 | 326 | 159 | 7 | 34 | 355 | 122 | 422 | 3.71e-74 | 236 |
Find 102 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTTCTAATCTACGTTTA+AGG | 0.102925 | 8_3:-60869807 | None:intergenic |
| TAATCTACGTTTAAGGTTAT+TGG | 0.113160 | 8_3:-60869800 | None:intergenic |
| CGTTATCACCGAACCCTTTC+TGG | 0.147008 | 8_3:-60870703 | None:intergenic |
| ACTGGTGTGGGTTTGTTTAC+TGG | 0.147997 | 8_3:-60871357 | None:intergenic |
| GTCTACTTCGGTGGTCTTAT+TGG | 0.151365 | 8_3:+60870464 | Msa1299570:CDS |
| AAGGAAATGTCTGTTATATT+TGG | 0.171677 | 8_3:-60869758 | None:intergenic |
| TTAGGCTTATTCACAGAATC+TGG | 0.255239 | 8_3:-60871801 | None:intergenic |
| AATCACACTGTTCAAATCTT+TGG | 0.259282 | 8_3:+60871438 | Msa1299570:CDS |
| GCATGTTGTGCTAGATTTAC+TGG | 0.284935 | 8_3:-60871375 | None:intergenic |
| ATTTGACTTCCAACTTGTTT+TGG | 0.291351 | 8_3:-60871546 | None:intergenic |
| TAAGGTTATTGGATAAGTTT+AGG | 0.303289 | 8_3:-60869789 | None:intergenic |
| ACCTGTCTCAGGAAGGAAAA+TGG | 0.309640 | 8_3:+60871656 | Msa1299570:CDS |
| TCTACTTCGGTGGTCTTATT+GGG | 0.313290 | 8_3:+60870465 | Msa1299570:CDS |
| CGGATTCGAGTTTGCCTGTT+GGG | 0.319058 | 8_3:-60871494 | None:intergenic |
| ACACTTACGTCAAGCTTTCC+AGG | 0.329020 | 8_3:-60871282 | None:intergenic |
| GTTCTACATATATATCTCTA+TGG | 0.335584 | 8_3:+60869864 | Msa1299570:five_prime_UTR |
| TTGTGTCCTCTTGGGGCTCC+TGG | 0.337282 | 8_3:+60869962 | Msa1299570:CDS |
| CAAGAGGACACAAAATAATA+AGG | 0.338110 | 8_3:-60869952 | None:intergenic |
| GAAATTGGCCCCACAAAATT+CGG | 0.350538 | 8_3:-60869833 | None:intergenic |
| GAATAAAATTATATCGTGTT+TGG | 0.351335 | 8_3:-60872027 | None:intergenic |
| ACAATCTGAGATGGAAAGTT+AGG | 0.353204 | 8_3:-60871819 | None:intergenic |
| CAAGACAAACCATGTTTATC+AGG | 0.353823 | 8_3:-60870110 | None:intergenic |
| GTAGAACTGAAGGAGGAAAT+TGG | 0.358714 | 8_3:-60869848 | None:intergenic |
| GTTGCTTGAAAAGAACATAT+TGG | 0.382460 | 8_3:+60871314 | Msa1299570:CDS |
| TATCATGGTTTATCGATTCA+TGG | 0.386506 | 8_3:+60871866 | Msa1299570:CDS |
| AGGGTTAATTTGACAAACTA+TGG | 0.390776 | 8_3:+60870062 | Msa1299570:CDS |
| TTATTGGGCGTGTGGCAAAT+AGG | 0.397686 | 8_3:+60870480 | Msa1299570:CDS |
| CAAGTATGGTGGCATTGCTT+TGG | 0.405496 | 8_3:+60871764 | Msa1299570:CDS |
| TGTGGGTTTGTTTACTGGCT+TGG | 0.409918 | 8_3:-60871352 | None:intergenic |
| AGTCAAATTAATGACCTTCC+TGG | 0.412379 | 8_3:+60871561 | Msa1299570:CDS |
| TTGCTTGAAAAGAACATATT+GGG | 0.414739 | 8_3:+60871315 | Msa1299570:CDS |
| AGTGAGAAAAGTGAGAAGAT+TGG | 0.420991 | 8_3:+60870011 | Msa1299570:CDS |
| AAAGTGGCTGATGTTGTTCT+TGG | 0.422078 | 8_3:+60870213 | Msa1299570:CDS |
| ATCTAGCACAACATGCATAC+TGG | 0.440235 | 8_3:+60871382 | Msa1299570:CDS |
| CACCACTGTTGTGGCCTCCT+AGG | 0.441891 | 8_3:-60871407 | None:intergenic |
| CAACATGCATACTGGAACCT+AGG | 0.444782 | 8_3:+60871390 | Msa1299570:CDS |
| AATGATAACATTGTGTATAC+TGG | 0.450709 | 8_3:+60872002 | Msa1299570:three_prime_UTR |
| GGAGCTACATATCACAAGTA+TGG | 0.454827 | 8_3:+60871750 | Msa1299570:CDS |
| TTTGGTTTAAGGAAATCATA+TGG | 0.455507 | 8_3:-60871528 | None:intergenic |
| GAAATTGCAGGTGGCCAGAA+AGG | 0.457841 | 8_3:+60870689 | Msa1299570:intron |
| AAATTGCCAGCTAATGATCA+TGG | 0.472562 | 8_3:+60870542 | Msa1299570:CDS |
| ATCATATGGCGTGTTCTTCA+CGG | 0.473462 | 8_3:-60871514 | None:intergenic |
| GATGATAAACTCATCCCAAC+AGG | 0.473597 | 8_3:+60871480 | Msa1299570:CDS |
| TTCTTTCACTATACAAACCT+TGG | 0.474623 | 8_3:-60871634 | None:intergenic |
| TTCCTTAAACCAAAACAAGT+TGG | 0.480970 | 8_3:+60871537 | Msa1299570:CDS |
| CCATCTCAGATTGTGAAGCC+TGG | 0.483704 | 8_3:+60871828 | Msa1299570:CDS |
| TGGAGGAGCTCAATTCACTT+TGG | 0.490944 | 8_3:+60870505 | Msa1299570:CDS |
| ATATGCTTGTATGTCTCTCC+AGG | 0.492010 | 8_3:-60871846 | None:intergenic |
| GCAGGTGGCCAGAAAGGGTT+CGG | 0.495854 | 8_3:+60870695 | Msa1299570:intron |
| TGTGCTAGATTTACTGGTGT+GGG | 0.510614 | 8_3:-60871369 | None:intergenic |
| GGAGCTCAATTCACTTTGGA+TGG | 0.518150 | 8_3:+60870509 | Msa1299570:CDS |
| TATAGTATTGCAATCCAACT+TGG | 0.523209 | 8_3:-60871692 | None:intergenic |
| CCAGGCTTCACAATCTGAGA+TGG | 0.524924 | 8_3:-60871828 | None:intergenic |
| GGGCGTGTGGCAAATAGGAT+TGG | 0.526639 | 8_3:+60870485 | Msa1299570:CDS |
| AAGGGTTCGGTGATAACGTA+TGG | 0.530622 | 8_3:+60870708 | Msa1299570:CDS |
| AACTACGCAATTGACGTGAA+TGG | 0.533501 | 8_3:+60871597 | Msa1299570:CDS |
| TAGGCTTATTCACAGAATCT+GGG | 0.535737 | 8_3:-60871800 | None:intergenic |
| AGCTAAATGATGAACAAGAA+AGG | 0.538781 | 8_3:-60871948 | None:intergenic |
| TGATTCCATTGAGCAATATG+AGG | 0.542382 | 8_3:+60870239 | Msa1299570:CDS |
| GGGATGAGTTTATCATCTAC+CGG | 0.542823 | 8_3:-60871474 | None:intergenic |
| TATATATGTAGAACTGAAGG+AGG | 0.543464 | 8_3:-60869855 | None:intergenic |
| ATAGTGAAAGAACCTGTCTC+AGG | 0.544121 | 8_3:+60871645 | Msa1299570:CDS |
| GTGTTCCCATGATCATTAGC+TGG | 0.546884 | 8_3:-60870548 | None:intergenic |
| TTGTGCTAGATTTACTGGTG+TGG | 0.547703 | 8_3:-60871370 | None:intergenic |
| AAATTGCAGGTGGCCAGAAA+GGG | 0.548265 | 8_3:+60870690 | Msa1299570:intron |
| TCATACCTCATATTGCTCAA+TGG | 0.551688 | 8_3:-60870244 | None:intergenic |
| TGAAATTTGATGCAGACTGA+TGG | 0.555921 | 8_3:+60870440 | Msa1299570:intron |
| ACTGATACTAAAGGAAAGGA+TGG | 0.557269 | 8_3:+60871729 | Msa1299570:CDS |
| CGGTGGTCTTATTGGGCGTG+TGG | 0.557522 | 8_3:+60870472 | Msa1299570:CDS |
| AGATATATATGTAGAACTGA+AGG | 0.560239 | 8_3:-60869858 | None:intergenic |
| CGTGTGGCAAATAGGATTGG+AGG | 0.564047 | 8_3:+60870488 | Msa1299570:CDS |
| GAGAAATAATTGTTCAACAA+TGG | 0.565502 | 8_3:+60869920 | Msa1299570:exon |
| ACGGATTCGAGTTTGCCTGT+TGG | 0.566013 | 8_3:-60871495 | None:intergenic |
| TAATTGTTCAACAATGGCTA+AGG | 0.569688 | 8_3:+60869926 | Msa1299570:exon |
| GTTGACTGATACTAAAGGAA+AGG | 0.576122 | 8_3:+60871725 | Msa1299570:CDS |
| TTTATCATCTACCGGTGTGA+TGG | 0.578356 | 8_3:-60871466 | None:intergenic |
| GATCATGGGAACACACTCCA+TGG | 0.584348 | 8_3:+60870557 | Msa1299570:CDS |
| GGCATTGCTTTGGAGACACA+AGG | 0.585444 | 8_3:+60871774 | Msa1299570:CDS |
| AATTGCCAGCTAATGATCAT+GGG | 0.589702 | 8_3:+60870543 | Msa1299570:CDS |
| GAGTTGTGGTCAAACCAAGT+TGG | 0.590032 | 8_3:+60871678 | Msa1299570:CDS |
| AGAGACATACAAGCATATCA+TGG | 0.596154 | 8_3:+60871851 | Msa1299570:CDS |
| TGGTCAAAATCATTTAACCA+AGG | 0.602850 | 8_3:+60871617 | Msa1299570:CDS |
| CAGACTGATGGAGTCTACTT+CGG | 0.614831 | 8_3:+60870452 | Msa1299570:intron |
| TGAAAGAACCTGTCTCAGGA+AGG | 0.620515 | 8_3:+60871649 | Msa1299570:CDS |
| GTTTATGTACCTGATAAACA+TGG | 0.622676 | 8_3:+60870101 | Msa1299570:CDS |
| TTCACCATCAAAACTGTGGT+AGG | 0.630989 | 8_3:-60870771 | None:intergenic |
| GGAATGTTGACTGATACTAA+AGG | 0.631864 | 8_3:+60871720 | Msa1299570:CDS |
| TAAGAATGTCACCACTGTTG+TGG | 0.637458 | 8_3:-60871416 | None:intergenic |
| CAGGAAGGAAAATGGAGTTG+TGG | 0.640117 | 8_3:+60871664 | Msa1299570:CDS |
| GGATTGCAATACTATACTAG+TGG | 0.642698 | 8_3:+60871699 | Msa1299570:CDS |
| TAATGTCGTATAAACCAGGA+AGG | 0.653054 | 8_3:-60871575 | None:intergenic |
| TAGTTAATGTCGTATAAACC+AGG | 0.656726 | 8_3:-60871579 | None:intergenic |
| CATGCATACTGGAACCTAGG+AGG | 0.665406 | 8_3:+60871393 | Msa1299570:CDS |
| AATGTGCATAAGTGTGAACC+AGG | 0.665476 | 8_3:-60869980 | None:intergenic |
| ACTGATGGAGTCTACTTCGG+TGG | 0.669276 | 8_3:+60870455 | Msa1299570:CDS |
| GCTACATATCACAAGTATGG+TGG | 0.672659 | 8_3:+60871753 | Msa1299570:CDS |
| AACCTAGGAGGCCACAACAG+TGG | 0.673482 | 8_3:+60871405 | Msa1299570:CDS |
| CTTTGGTTCATCCATCACAC+CGG | 0.680058 | 8_3:+60871455 | Msa1299570:CDS |
| CTTGTTCACCATCAAAACTG+TGG | 0.689661 | 8_3:-60870775 | None:intergenic |
| ATGGAAAGTAGCAGTTCACA+AGG | 0.691394 | 8_3:+60870727 | Msa1299570:CDS |
| TGTGAACCAGGAGCCCCAAG+AGG | 0.695938 | 8_3:-60869968 | None:intergenic |
| ATAAGTTTAGGATTTCAACA+AGG | 0.716453 | 8_3:-60869777 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCAAAATTTAAAATCAAAA+CGG | - | chr8_3:60871114-60871133 | None:intergenic | 10.0% |
| !!! | TTCAAAATTTAAAATCAAAA+CGG | - | chr8_3:60871114-60871133 | None:intergenic | 10.0% |
| !! | TAAATATTAATGTGGAATAA+GGG | - | chr8_3:60870161-60870180 | None:intergenic | 15.0% |
| !! | ATAAATATTAATGTGGAATA+AGG | - | chr8_3:60870162-60870181 | None:intergenic | 15.0% |
| !! | AAGCTATATAAATATTAATG+TGG | - | chr8_3:60870169-60870188 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATTTACTTTTCC+AGG | + | chr8_3:60870189-60870208 | Msa1299570:intron | 15.0% |
| !!! | TTTTTTTATTTACTTTTCCA+GGG | + | chr8_3:60870190-60870209 | Msa1299570:intron | 15.0% |
| !! | TACTATATATAAGAGAAAAT+TGG | + | chr8_3:60870360-60870379 | Msa1299570:intron | 15.0% |
| !! | GAATAGTTAAATTATATATG+TGG | - | chr8_3:60870829-60870848 | None:intergenic | 15.0% |
| !! | TAAATATTAATGTGGAATAA+GGG | - | chr8_3:60870161-60870180 | None:intergenic | 15.0% |
| !! | ATAAATATTAATGTGGAATA+AGG | - | chr8_3:60870162-60870181 | None:intergenic | 15.0% |
| !! | AAGCTATATAAATATTAATG+TGG | - | chr8_3:60870169-60870188 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATTTACTTTTCC+AGG | + | chr8_3:60870189-60870208 | Msa1299570:intron | 15.0% |
| !!! | TTTTTTTATTTACTTTTCCA+GGG | + | chr8_3:60870190-60870209 | Msa1299570:intron | 15.0% |
| !! | TACTATATATAAGAGAAAAT+TGG | + | chr8_3:60870360-60870379 | Msa1299570:intron | 15.0% |
| !! | GAATAGTTAAATTATATATG+TGG | - | chr8_3:60870829-60870848 | None:intergenic | 15.0% |
| !!! | GGATTTTATGAGTTAAAAAA+AGG | + | chr8_3:60870032-60870051 | Msa1299570:CDS | 20.0% |
| !! | ATATTAATATTAACGTACCA+TGG | - | chr8_3:60870577-60870596 | None:intergenic | 20.0% |
| !! | GTTTCTGATAAATAATTTAC+AGG | + | chr8_3:60870603-60870622 | Msa1299570:intron | 20.0% |
| !! | TACGATTCTTTGTAATATTA+AGG | + | chr8_3:60870954-60870973 | Msa1299570:intron | 20.0% |
| !! | GAATAAAATTATATCGTGTT+TGG | - | chr8_3:60872030-60872049 | None:intergenic | 20.0% |
| !!! | GGATTTTATGAGTTAAAAAA+AGG | + | chr8_3:60870032-60870051 | Msa1299570:CDS | 20.0% |
| !! | ATATTAATATTAACGTACCA+TGG | - | chr8_3:60870577-60870596 | None:intergenic | 20.0% |
| !! | GTTTCTGATAAATAATTTAC+AGG | + | chr8_3:60870603-60870622 | Msa1299570:intron | 20.0% |
| !! | TACGATTCTTTGTAATATTA+AGG | + | chr8_3:60870954-60870973 | Msa1299570:intron | 20.0% |
| !! | GAATAAAATTATATCGTGTT+TGG | - | chr8_3:60872030-60872049 | None:intergenic | 20.0% |
| ! | AAGGAAATGTCTGTTATATT+TGG | - | chr8_3:60869761-60869780 | None:intergenic | 25.0% |
| !! | ATAAGTTTAGGATTTCAACA+AGG | - | chr8_3:60869780-60869799 | None:intergenic | 25.0% |
| ! | TAAGGTTATTGGATAAGTTT+AGG | - | chr8_3:60869792-60869811 | None:intergenic | 25.0% |
| !! | TAATCTACGTTTAAGGTTAT+TGG | - | chr8_3:60869803-60869822 | None:intergenic | 25.0% |
| ! | AACTTTCTAATCTACGTTTA+AGG | - | chr8_3:60869810-60869829 | None:intergenic | 25.0% |
| !! | AAAGTTAATCCGAATTTTGT+GGG | + | chr8_3:60869824-60869843 | Msa1299570:five_prime_UTR | 25.0% |
| ! | AGATATATATGTAGAACTGA+AGG | - | chr8_3:60869861-60869880 | None:intergenic | 25.0% |
| ! | GTTCTACATATATATCTCTA+TGG | + | chr8_3:60869864-60869883 | Msa1299570:five_prime_UTR | 25.0% |
| ! | GAGAAATAATTGTTCAACAA+TGG | + | chr8_3:60869920-60869939 | Msa1299570:exon | 25.0% |
| !!! | TTATTATTTTGTGTCCTCTT+GGG | + | chr8_3:60869954-60869973 | Msa1299570:CDS | 25.0% |
| !! | AGTTAAAAAAAGGAAGTATG+AGG | + | chr8_3:60870042-60870061 | Msa1299570:CDS | 25.0% |
| !! | GTTAAAAAAAGGAAGTATGA+GGG | + | chr8_3:60870043-60870062 | Msa1299570:CDS | 25.0% |
| ! | TTAATCATTGATGAAATTGC+AGG | + | chr8_3:60870677-60870696 | Msa1299570:intron | 25.0% |
| ! | AGTTAAATTATATATGTGGC+AGG | - | chr8_3:60870825-60870844 | None:intergenic | 25.0% |
| !!! | AGTTTTATTGCTACAAACAT+GGG | - | chr8_3:60871216-60871235 | None:intergenic | 25.0% |
| !!! | TAGTTTTATTGCTACAAACA+TGG | - | chr8_3:60871217-60871236 | None:intergenic | 25.0% |
| ! | TTTGCAAAATAAAACTCAAC+AGG | + | chr8_3:60871255-60871274 | Msa1299570:intron | 25.0% |
| ! | TTGCTTGAAAAGAACATATT+GGG | + | chr8_3:60871315-60871334 | Msa1299570:CDS | 25.0% |
| !! | TTTGGTTTAAGGAAATCATA+TGG | - | chr8_3:60871531-60871550 | None:intergenic | 25.0% |
| ! | AATGATAACATTGTGTATAC+TGG | + | chr8_3:60872002-60872021 | Msa1299570:three_prime_UTR | 25.0% |
| ! | AAGGAAATGTCTGTTATATT+TGG | - | chr8_3:60869761-60869780 | None:intergenic | 25.0% |
| !! | ATAAGTTTAGGATTTCAACA+AGG | - | chr8_3:60869780-60869799 | None:intergenic | 25.0% |
| ! | TAAGGTTATTGGATAAGTTT+AGG | - | chr8_3:60869792-60869811 | None:intergenic | 25.0% |
| !! | TAATCTACGTTTAAGGTTAT+TGG | - | chr8_3:60869803-60869822 | None:intergenic | 25.0% |
| ! | AACTTTCTAATCTACGTTTA+AGG | - | chr8_3:60869810-60869829 | None:intergenic | 25.0% |
| !! | AAAGTTAATCCGAATTTTGT+GGG | + | chr8_3:60869824-60869843 | Msa1299570:five_prime_UTR | 25.0% |
| ! | AGATATATATGTAGAACTGA+AGG | - | chr8_3:60869861-60869880 | None:intergenic | 25.0% |
| ! | GTTCTACATATATATCTCTA+TGG | + | chr8_3:60869864-60869883 | Msa1299570:five_prime_UTR | 25.0% |
| ! | GAGAAATAATTGTTCAACAA+TGG | + | chr8_3:60869920-60869939 | Msa1299570:exon | 25.0% |
| !!! | TTATTATTTTGTGTCCTCTT+GGG | + | chr8_3:60869954-60869973 | Msa1299570:CDS | 25.0% |
| !! | AGTTAAAAAAAGGAAGTATG+AGG | + | chr8_3:60870042-60870061 | Msa1299570:CDS | 25.0% |
| !! | GTTAAAAAAAGGAAGTATGA+GGG | + | chr8_3:60870043-60870062 | Msa1299570:CDS | 25.0% |
| ! | TTAATCATTGATGAAATTGC+AGG | + | chr8_3:60870677-60870696 | Msa1299570:intron | 25.0% |
| ! | AGTTAAATTATATATGTGGC+AGG | - | chr8_3:60870825-60870844 | None:intergenic | 25.0% |
| !!! | AGTTTTATTGCTACAAACAT+GGG | - | chr8_3:60871216-60871235 | None:intergenic | 25.0% |
| !!! | TAGTTTTATTGCTACAAACA+TGG | - | chr8_3:60871217-60871236 | None:intergenic | 25.0% |
| ! | TTTGCAAAATAAAACTCAAC+AGG | + | chr8_3:60871255-60871274 | Msa1299570:intron | 25.0% |
| ! | TTGCTTGAAAAGAACATATT+GGG | + | chr8_3:60871315-60871334 | Msa1299570:CDS | 25.0% |
| !! | TTTGGTTTAAGGAAATCATA+TGG | - | chr8_3:60871531-60871550 | None:intergenic | 25.0% |
| ! | AATGATAACATTGTGTATAC+TGG | + | chr8_3:60872002-60872021 | Msa1299570:three_prime_UTR | 25.0% |
| ! | GAAAGTTAATCCGAATTTTG+TGG | + | chr8_3:60869823-60869842 | Msa1299570:five_prime_UTR | 30.0% |
| ! | AAGTTAATCCGAATTTTGTG+GGG | + | chr8_3:60869825-60869844 | Msa1299570:five_prime_UTR | 30.0% |
| TATATATGTAGAACTGAAGG+AGG | - | chr8_3:60869858-60869877 | None:intergenic | 30.0% | |
| TAATTGTTCAACAATGGCTA+AGG | + | chr8_3:60869926-60869945 | Msa1299570:exon | 30.0% | |
| CAAGAGGACACAAAATAATA+AGG | - | chr8_3:60869955-60869974 | None:intergenic | 30.0% | |
| !! | CTTATTATTTTGTGTCCTCT+TGG | + | chr8_3:60869953-60869972 | Msa1299570:CDS | 30.0% |
| !! | TATTATTTTGTGTCCTCTTG+GGG | + | chr8_3:60869955-60869974 | Msa1299570:CDS | 30.0% |
| ! | AGGGTTAATTTGACAAACTA+TGG | + | chr8_3:60870062-60870081 | Msa1299570:CDS | 30.0% |
| GTTTATGTACCTGATAAACA+TGG | + | chr8_3:60870101-60870120 | Msa1299570:CDS | 30.0% | |
| CAAAGAATCGTATACAAATG+AGG | - | chr8_3:60870946-60870965 | None:intergenic | 30.0% | |
| !! | GTTTTATTGCTACAAACATG+GGG | - | chr8_3:60871215-60871234 | None:intergenic | 30.0% |
| GTTGCTTGAAAAGAACATAT+TGG | + | chr8_3:60871314-60871333 | Msa1299570:CDS | 30.0% | |
| AATCACACTGTTCAAATCTT+TGG | + | chr8_3:60871438-60871457 | Msa1299570:CDS | 30.0% | |
| TTCCTTAAACCAAAACAAGT+TGG | + | chr8_3:60871537-60871556 | Msa1299570:CDS | 30.0% | |
| !!! | TTCCAACTTGTTTTGGTTTA+AGG | - | chr8_3:60871542-60871561 | None:intergenic | 30.0% |
| !! | ATTTGACTTCCAACTTGTTT+TGG | - | chr8_3:60871549-60871568 | None:intergenic | 30.0% |
| TAGTTAATGTCGTATAAACC+AGG | - | chr8_3:60871582-60871601 | None:intergenic | 30.0% | |
| TGGTCAAAATCATTTAACCA+AGG | + | chr8_3:60871617-60871636 | Msa1299570:CDS | 30.0% | |
| TTCTTTCACTATACAAACCT+TGG | - | chr8_3:60871637-60871656 | None:intergenic | 30.0% | |
| TATAGTATTGCAATCCAACT+TGG | - | chr8_3:60871695-60871714 | None:intergenic | 30.0% | |
| !! | TATCATGGTTTATCGATTCA+TGG | + | chr8_3:60871866-60871885 | Msa1299570:CDS | 30.0% |
| AGCTAAATGATGAACAAGAA+AGG | - | chr8_3:60871951-60871970 | None:intergenic | 30.0% | |
| ! | GAAAGTTAATCCGAATTTTG+TGG | + | chr8_3:60869823-60869842 | Msa1299570:five_prime_UTR | 30.0% |
| ! | AAGTTAATCCGAATTTTGTG+GGG | + | chr8_3:60869825-60869844 | Msa1299570:five_prime_UTR | 30.0% |
| TATATATGTAGAACTGAAGG+AGG | - | chr8_3:60869858-60869877 | None:intergenic | 30.0% | |
| TAATTGTTCAACAATGGCTA+AGG | + | chr8_3:60869926-60869945 | Msa1299570:exon | 30.0% | |
| CAAGAGGACACAAAATAATA+AGG | - | chr8_3:60869955-60869974 | None:intergenic | 30.0% | |
| !! | CTTATTATTTTGTGTCCTCT+TGG | + | chr8_3:60869953-60869972 | Msa1299570:CDS | 30.0% |
| !! | TATTATTTTGTGTCCTCTTG+GGG | + | chr8_3:60869955-60869974 | Msa1299570:CDS | 30.0% |
| ! | AGGGTTAATTTGACAAACTA+TGG | + | chr8_3:60870062-60870081 | Msa1299570:CDS | 30.0% |
| GTTTATGTACCTGATAAACA+TGG | + | chr8_3:60870101-60870120 | Msa1299570:CDS | 30.0% | |
| CAAAGAATCGTATACAAATG+AGG | - | chr8_3:60870946-60870965 | None:intergenic | 30.0% | |
| !! | GTTTTATTGCTACAAACATG+GGG | - | chr8_3:60871215-60871234 | None:intergenic | 30.0% |
| GTTGCTTGAAAAGAACATAT+TGG | + | chr8_3:60871314-60871333 | Msa1299570:CDS | 30.0% | |
| AATCACACTGTTCAAATCTT+TGG | + | chr8_3:60871438-60871457 | Msa1299570:CDS | 30.0% | |
| TTCCTTAAACCAAAACAAGT+TGG | + | chr8_3:60871537-60871556 | Msa1299570:CDS | 30.0% | |
| !!! | TTCCAACTTGTTTTGGTTTA+AGG | - | chr8_3:60871542-60871561 | None:intergenic | 30.0% |
| !! | ATTTGACTTCCAACTTGTTT+TGG | - | chr8_3:60871549-60871568 | None:intergenic | 30.0% |
| TAGTTAATGTCGTATAAACC+AGG | - | chr8_3:60871582-60871601 | None:intergenic | 30.0% | |
| TGGTCAAAATCATTTAACCA+AGG | + | chr8_3:60871617-60871636 | Msa1299570:CDS | 30.0% | |
| TTCTTTCACTATACAAACCT+TGG | - | chr8_3:60871637-60871656 | None:intergenic | 30.0% | |
| TATAGTATTGCAATCCAACT+TGG | - | chr8_3:60871695-60871714 | None:intergenic | 30.0% | |
| !! | TATCATGGTTTATCGATTCA+TGG | + | chr8_3:60871866-60871885 | Msa1299570:CDS | 30.0% |
| AGCTAAATGATGAACAAGAA+AGG | - | chr8_3:60871951-60871970 | None:intergenic | 30.0% | |
| AGTGAGAAAAGTGAGAAGAT+TGG | + | chr8_3:60870011-60870030 | Msa1299570:CDS | 35.0% | |
| CAAGACAAACCATGTTTATC+AGG | - | chr8_3:60870113-60870132 | None:intergenic | 35.0% | |
| !! | ATTTACTTTTCCAGGGAAAG+TGG | + | chr8_3:60870197-60870216 | Msa1299570:intron | 35.0% |
| TGATTCCATTGAGCAATATG+AGG | + | chr8_3:60870239-60870258 | Msa1299570:CDS | 35.0% | |
| TCATACCTCATATTGCTCAA+TGG | - | chr8_3:60870247-60870266 | None:intergenic | 35.0% | |
| ! | GGATCAATAGTTGATGCATT+TGG | + | chr8_3:60870381-60870400 | Msa1299570:intron | 35.0% |
| ! | ATGCATTTGGTTCAAATCGT+GGG | + | chr8_3:60870394-60870413 | Msa1299570:intron | 35.0% |
| TGAAATTTGATGCAGACTGA+TGG | + | chr8_3:60870440-60870459 | Msa1299570:intron | 35.0% | |
| AAATTGCCAGCTAATGATCA+TGG | + | chr8_3:60870542-60870561 | Msa1299570:CDS | 35.0% | |
| AATTGCCAGCTAATGATCAT+GGG | + | chr8_3:60870543-60870562 | Msa1299570:CDS | 35.0% | |
| ATCATTGATGAAATTGCAGG+TGG | + | chr8_3:60870680-60870699 | Msa1299570:intron | 35.0% | |
| !! | TTTACCTACCACAGTTTTGA+TGG | + | chr8_3:60870767-60870786 | Msa1299570:CDS | 35.0% |
| GTACTAACGGTGTGAATTTA+GGG | - | chr8_3:60871069-60871088 | None:intergenic | 35.0% | |
| TGTACTAACGGTGTGAATTT+AGG | - | chr8_3:60871070-60871089 | None:intergenic | 35.0% | |
| ! | CATATTGCATTGGTGATTGT+TGG | - | chr8_3:60871183-60871202 | None:intergenic | 35.0% |
| ! | TAAAACTCAACAGGTTTTCC+TGG | + | chr8_3:60871264-60871283 | Msa1299570:intron | 35.0% |
| AGTCAAATTAATGACCTTCC+TGG | + | chr8_3:60871561-60871580 | Msa1299570:CDS | 35.0% | |
| TAATGTCGTATAAACCAGGA+AGG | - | chr8_3:60871578-60871597 | None:intergenic | 35.0% | |
| GGATTGCAATACTATACTAG+TGG | + | chr8_3:60871699-60871718 | Msa1299570:CDS | 35.0% | |
| ! | GGAATGTTGACTGATACTAA+AGG | + | chr8_3:60871720-60871739 | Msa1299570:CDS | 35.0% |
| GTTGACTGATACTAAAGGAA+AGG | + | chr8_3:60871725-60871744 | Msa1299570:CDS | 35.0% | |
| ACTGATACTAAAGGAAAGGA+TGG | + | chr8_3:60871729-60871748 | Msa1299570:CDS | 35.0% | |
| TAGGCTTATTCACAGAATCT+GGG | - | chr8_3:60871803-60871822 | None:intergenic | 35.0% | |
| TTAGGCTTATTCACAGAATC+TGG | - | chr8_3:60871804-60871823 | None:intergenic | 35.0% | |
| ! | ACAATCTGAGATGGAAAGTT+AGG | - | chr8_3:60871822-60871841 | None:intergenic | 35.0% |
| AGAGACATACAAGCATATCA+TGG | + | chr8_3:60871851-60871870 | Msa1299570:CDS | 35.0% | |
| AGTGAGAAAAGTGAGAAGAT+TGG | + | chr8_3:60870011-60870030 | Msa1299570:CDS | 35.0% | |
| CAAGACAAACCATGTTTATC+AGG | - | chr8_3:60870113-60870132 | None:intergenic | 35.0% | |
| !! | ATTTACTTTTCCAGGGAAAG+TGG | + | chr8_3:60870197-60870216 | Msa1299570:intron | 35.0% |
| TGATTCCATTGAGCAATATG+AGG | + | chr8_3:60870239-60870258 | Msa1299570:CDS | 35.0% | |
| TCATACCTCATATTGCTCAA+TGG | - | chr8_3:60870247-60870266 | None:intergenic | 35.0% | |
| ! | GGATCAATAGTTGATGCATT+TGG | + | chr8_3:60870381-60870400 | Msa1299570:intron | 35.0% |
| ! | ATGCATTTGGTTCAAATCGT+GGG | + | chr8_3:60870394-60870413 | Msa1299570:intron | 35.0% |
| TGAAATTTGATGCAGACTGA+TGG | + | chr8_3:60870440-60870459 | Msa1299570:intron | 35.0% | |
| AAATTGCCAGCTAATGATCA+TGG | + | chr8_3:60870542-60870561 | Msa1299570:CDS | 35.0% | |
| AATTGCCAGCTAATGATCAT+GGG | + | chr8_3:60870543-60870562 | Msa1299570:CDS | 35.0% | |
| ATCATTGATGAAATTGCAGG+TGG | + | chr8_3:60870680-60870699 | Msa1299570:intron | 35.0% | |
| !! | TTTACCTACCACAGTTTTGA+TGG | + | chr8_3:60870767-60870786 | Msa1299570:CDS | 35.0% |
| GTACTAACGGTGTGAATTTA+GGG | - | chr8_3:60871069-60871088 | None:intergenic | 35.0% | |
| TGTACTAACGGTGTGAATTT+AGG | - | chr8_3:60871070-60871089 | None:intergenic | 35.0% | |
| ! | CATATTGCATTGGTGATTGT+TGG | - | chr8_3:60871183-60871202 | None:intergenic | 35.0% |
| ! | TAAAACTCAACAGGTTTTCC+TGG | + | chr8_3:60871264-60871283 | Msa1299570:intron | 35.0% |
| AGTCAAATTAATGACCTTCC+TGG | + | chr8_3:60871561-60871580 | Msa1299570:CDS | 35.0% | |
| TAATGTCGTATAAACCAGGA+AGG | - | chr8_3:60871578-60871597 | None:intergenic | 35.0% | |
| GGATTGCAATACTATACTAG+TGG | + | chr8_3:60871699-60871718 | Msa1299570:CDS | 35.0% | |
| ! | GGAATGTTGACTGATACTAA+AGG | + | chr8_3:60871720-60871739 | Msa1299570:CDS | 35.0% |
| GTTGACTGATACTAAAGGAA+AGG | + | chr8_3:60871725-60871744 | Msa1299570:CDS | 35.0% | |
| ACTGATACTAAAGGAAAGGA+TGG | + | chr8_3:60871729-60871748 | Msa1299570:CDS | 35.0% | |
| TAGGCTTATTCACAGAATCT+GGG | - | chr8_3:60871803-60871822 | None:intergenic | 35.0% | |
| TTAGGCTTATTCACAGAATC+TGG | - | chr8_3:60871804-60871823 | None:intergenic | 35.0% | |
| ! | ACAATCTGAGATGGAAAGTT+AGG | - | chr8_3:60871822-60871841 | None:intergenic | 35.0% |
| AGAGACATACAAGCATATCA+TGG | + | chr8_3:60871851-60871870 | Msa1299570:CDS | 35.0% | |
| GAAATTGGCCCCACAAAATT+CGG | - | chr8_3:60869836-60869855 | None:intergenic | 40.0% | |
| GTAGAACTGAAGGAGGAAAT+TGG | - | chr8_3:60869851-60869870 | None:intergenic | 40.0% | |
| AATGTGCATAAGTGTGAACC+AGG | - | chr8_3:60869983-60870002 | None:intergenic | 40.0% | |
| AAAGTGGCTGATGTTGTTCT+TGG | + | chr8_3:60870213-60870232 | Msa1299570:CDS | 40.0% | |
| ! | GATGCATTTGGTTCAAATCG+TGG | + | chr8_3:60870393-60870412 | Msa1299570:intron | 40.0% |
| !! | TCTACTTCGGTGGTCTTATT+GGG | + | chr8_3:60870465-60870484 | Msa1299570:CDS | 40.0% |
| ATGGAAAGTAGCAGTTCACA+AGG | + | chr8_3:60870727-60870746 | Msa1299570:CDS | 40.0% | |
| TTCACCATCAAAACTGTGGT+AGG | - | chr8_3:60870774-60870793 | None:intergenic | 40.0% | |
| CTTGTTCACCATCAAAACTG+TGG | - | chr8_3:60870778-60870797 | None:intergenic | 40.0% | |
| !!! | CACAGTTTTGATGGTGAACA+AGG | + | chr8_3:60870776-60870795 | Msa1299570:CDS | 40.0% |
| GTATACAAATGAGGCTGATG+TGG | - | chr8_3:60870937-60870956 | None:intergenic | 40.0% | |
| GTTACCACAATCGAAAACCT+TGG | + | chr8_3:60870992-60871011 | Msa1299570:intron | 40.0% | |
| ! | ACAACCAAGGTTTTCGATTG+TGG | - | chr8_3:60870999-60871018 | None:intergenic | 40.0% |
| !! | CTTGGTTGTTCGTTTTAGCA+CGG | + | chr8_3:60871010-60871029 | Msa1299570:intron | 40.0% |
| GACAGTCATCGATGTACTAA+CGG | - | chr8_3:60871082-60871101 | None:intergenic | 40.0% | |
| GCTGCATCAACATATTGCAT+TGG | - | chr8_3:60871193-60871212 | None:intergenic | 40.0% | |
| TGTGCTAGATTTACTGGTGT+GGG | - | chr8_3:60871372-60871391 | None:intergenic | 40.0% | |
| TTGTGCTAGATTTACTGGTG+TGG | - | chr8_3:60871373-60871392 | None:intergenic | 40.0% | |
| GCATGTTGTGCTAGATTTAC+TGG | - | chr8_3:60871378-60871397 | None:intergenic | 40.0% | |
| ATCTAGCACAACATGCATAC+TGG | + | chr8_3:60871382-60871401 | Msa1299570:CDS | 40.0% | |
| TAAGAATGTCACCACTGTTG+TGG | - | chr8_3:60871419-60871438 | None:intergenic | 40.0% | |
| TTTATCATCTACCGGTGTGA+TGG | - | chr8_3:60871469-60871488 | None:intergenic | 40.0% | |
| GGGATGAGTTTATCATCTAC+CGG | - | chr8_3:60871477-60871496 | None:intergenic | 40.0% | |
| GATGATAAACTCATCCCAAC+AGG | + | chr8_3:60871480-60871499 | Msa1299570:CDS | 40.0% | |
| ATCATATGGCGTGTTCTTCA+CGG | - | chr8_3:60871517-60871536 | None:intergenic | 40.0% | |
| AACTACGCAATTGACGTGAA+TGG | + | chr8_3:60871597-60871616 | Msa1299570:CDS | 40.0% | |
| ATAGTGAAAGAACCTGTCTC+AGG | + | chr8_3:60871645-60871664 | Msa1299570:CDS | 40.0% | |
| GGAGCTACATATCACAAGTA+TGG | + | chr8_3:60871750-60871769 | Msa1299570:CDS | 40.0% | |
| GCTACATATCACAAGTATGG+TGG | + | chr8_3:60871753-60871772 | Msa1299570:CDS | 40.0% | |
| ATATGCTTGTATGTCTCTCC+AGG | - | chr8_3:60871849-60871868 | None:intergenic | 40.0% | |
| GAAATTGGCCCCACAAAATT+CGG | - | chr8_3:60869836-60869855 | None:intergenic | 40.0% | |
| GTAGAACTGAAGGAGGAAAT+TGG | - | chr8_3:60869851-60869870 | None:intergenic | 40.0% | |
| AATGTGCATAAGTGTGAACC+AGG | - | chr8_3:60869983-60870002 | None:intergenic | 40.0% | |
| AAAGTGGCTGATGTTGTTCT+TGG | + | chr8_3:60870213-60870232 | Msa1299570:CDS | 40.0% | |
| ! | GATGCATTTGGTTCAAATCG+TGG | + | chr8_3:60870393-60870412 | Msa1299570:intron | 40.0% |
| !! | TCTACTTCGGTGGTCTTATT+GGG | + | chr8_3:60870465-60870484 | Msa1299570:CDS | 40.0% |
| ATGGAAAGTAGCAGTTCACA+AGG | + | chr8_3:60870727-60870746 | Msa1299570:CDS | 40.0% | |
| TTCACCATCAAAACTGTGGT+AGG | - | chr8_3:60870774-60870793 | None:intergenic | 40.0% | |
| CTTGTTCACCATCAAAACTG+TGG | - | chr8_3:60870778-60870797 | None:intergenic | 40.0% | |
| !!! | CACAGTTTTGATGGTGAACA+AGG | + | chr8_3:60870776-60870795 | Msa1299570:CDS | 40.0% |
| GTATACAAATGAGGCTGATG+TGG | - | chr8_3:60870937-60870956 | None:intergenic | 40.0% | |
| GTTACCACAATCGAAAACCT+TGG | + | chr8_3:60870992-60871011 | Msa1299570:intron | 40.0% | |
| ! | ACAACCAAGGTTTTCGATTG+TGG | - | chr8_3:60870999-60871018 | None:intergenic | 40.0% |
| !! | CTTGGTTGTTCGTTTTAGCA+CGG | + | chr8_3:60871010-60871029 | Msa1299570:intron | 40.0% |
| GACAGTCATCGATGTACTAA+CGG | - | chr8_3:60871082-60871101 | None:intergenic | 40.0% | |
| GCTGCATCAACATATTGCAT+TGG | - | chr8_3:60871193-60871212 | None:intergenic | 40.0% | |
| TGTGCTAGATTTACTGGTGT+GGG | - | chr8_3:60871372-60871391 | None:intergenic | 40.0% | |
| TTGTGCTAGATTTACTGGTG+TGG | - | chr8_3:60871373-60871392 | None:intergenic | 40.0% | |
| GCATGTTGTGCTAGATTTAC+TGG | - | chr8_3:60871378-60871397 | None:intergenic | 40.0% | |
| ATCTAGCACAACATGCATAC+TGG | + | chr8_3:60871382-60871401 | Msa1299570:CDS | 40.0% | |
| TAAGAATGTCACCACTGTTG+TGG | - | chr8_3:60871419-60871438 | None:intergenic | 40.0% | |
| TTTATCATCTACCGGTGTGA+TGG | - | chr8_3:60871469-60871488 | None:intergenic | 40.0% | |
| GGGATGAGTTTATCATCTAC+CGG | - | chr8_3:60871477-60871496 | None:intergenic | 40.0% | |
| GATGATAAACTCATCCCAAC+AGG | + | chr8_3:60871480-60871499 | Msa1299570:CDS | 40.0% | |
| ATCATATGGCGTGTTCTTCA+CGG | - | chr8_3:60871517-60871536 | None:intergenic | 40.0% | |
| AACTACGCAATTGACGTGAA+TGG | + | chr8_3:60871597-60871616 | Msa1299570:CDS | 40.0% | |
| ATAGTGAAAGAACCTGTCTC+AGG | + | chr8_3:60871645-60871664 | Msa1299570:CDS | 40.0% | |
| GGAGCTACATATCACAAGTA+TGG | + | chr8_3:60871750-60871769 | Msa1299570:CDS | 40.0% | |
| GCTACATATCACAAGTATGG+TGG | + | chr8_3:60871753-60871772 | Msa1299570:CDS | 40.0% | |
| ATATGCTTGTATGTCTCTCC+AGG | - | chr8_3:60871849-60871868 | None:intergenic | 40.0% | |
| CAGACTGATGGAGTCTACTT+CGG | + | chr8_3:60870452-60870471 | Msa1299570:intron | 45.0% | |
| !! | GTCTACTTCGGTGGTCTTAT+TGG | + | chr8_3:60870464-60870483 | Msa1299570:CDS | 45.0% |
| TTATTGGGCGTGTGGCAAAT+AGG | + | chr8_3:60870480-60870499 | Msa1299570:CDS | 45.0% | |
| TGGAGGAGCTCAATTCACTT+TGG | + | chr8_3:60870505-60870524 | Msa1299570:CDS | 45.0% | |
| GGAGCTCAATTCACTTTGGA+TGG | + | chr8_3:60870509-60870528 | Msa1299570:CDS | 45.0% | |
| GTGTTCCCATGATCATTAGC+TGG | - | chr8_3:60870551-60870570 | None:intergenic | 45.0% | |
| AAATTGCAGGTGGCCAGAAA+GGG | + | chr8_3:60870690-60870709 | Msa1299570:intron | 45.0% | |
| !! | AAGGGTTCGGTGATAACGTA+TGG | + | chr8_3:60870708-60870727 | Msa1299570:CDS | 45.0% |
| CGTGCTAAAACGAACAACCA+AGG | - | chr8_3:60871012-60871031 | None:intergenic | 45.0% | |
| ACACTTACGTCAAGCTTTCC+AGG | - | chr8_3:60871285-60871304 | None:intergenic | 45.0% | |
| ! | TGTGGGTTTGTTTACTGGCT+TGG | - | chr8_3:60871355-60871374 | None:intergenic | 45.0% |
| ! | ACTGGTGTGGGTTTGTTTAC+TGG | - | chr8_3:60871360-60871379 | None:intergenic | 45.0% |
| CAACATGCATACTGGAACCT+AGG | + | chr8_3:60871390-60871409 | Msa1299570:CDS | 45.0% | |
| ! | CTTTGGTTCATCCATCACAC+CGG | + | chr8_3:60871455-60871474 | Msa1299570:CDS | 45.0% |
| TGAAAGAACCTGTCTCAGGA+AGG | + | chr8_3:60871649-60871668 | Msa1299570:CDS | 45.0% | |
| ACCTGTCTCAGGAAGGAAAA+TGG | + | chr8_3:60871656-60871675 | Msa1299570:CDS | 45.0% | |
| ! | TCCATTTTCCTTCCTGAGAC+AGG | - | chr8_3:60871660-60871679 | None:intergenic | 45.0% |
| CAGGAAGGAAAATGGAGTTG+TGG | + | chr8_3:60871664-60871683 | Msa1299570:CDS | 45.0% | |
| GAGTTGTGGTCAAACCAAGT+TGG | + | chr8_3:60871678-60871697 | Msa1299570:CDS | 45.0% | |
| CAAGTATGGTGGCATTGCTT+TGG | + | chr8_3:60871764-60871783 | Msa1299570:CDS | 45.0% | |
| CAGACTGATGGAGTCTACTT+CGG | + | chr8_3:60870452-60870471 | Msa1299570:intron | 45.0% | |
| !! | GTCTACTTCGGTGGTCTTAT+TGG | + | chr8_3:60870464-60870483 | Msa1299570:CDS | 45.0% |
| TTATTGGGCGTGTGGCAAAT+AGG | + | chr8_3:60870480-60870499 | Msa1299570:CDS | 45.0% | |
| TGGAGGAGCTCAATTCACTT+TGG | + | chr8_3:60870505-60870524 | Msa1299570:CDS | 45.0% | |
| GGAGCTCAATTCACTTTGGA+TGG | + | chr8_3:60870509-60870528 | Msa1299570:CDS | 45.0% | |
| GTGTTCCCATGATCATTAGC+TGG | - | chr8_3:60870551-60870570 | None:intergenic | 45.0% | |
| AAATTGCAGGTGGCCAGAAA+GGG | + | chr8_3:60870690-60870709 | Msa1299570:intron | 45.0% | |
| !! | AAGGGTTCGGTGATAACGTA+TGG | + | chr8_3:60870708-60870727 | Msa1299570:CDS | 45.0% |
| CGTGCTAAAACGAACAACCA+AGG | - | chr8_3:60871012-60871031 | None:intergenic | 45.0% | |
| ACACTTACGTCAAGCTTTCC+AGG | - | chr8_3:60871285-60871304 | None:intergenic | 45.0% | |
| ! | TGTGGGTTTGTTTACTGGCT+TGG | - | chr8_3:60871355-60871374 | None:intergenic | 45.0% |
| ! | ACTGGTGTGGGTTTGTTTAC+TGG | - | chr8_3:60871360-60871379 | None:intergenic | 45.0% |
| CAACATGCATACTGGAACCT+AGG | + | chr8_3:60871390-60871409 | Msa1299570:CDS | 45.0% | |
| ! | CTTTGGTTCATCCATCACAC+CGG | + | chr8_3:60871455-60871474 | Msa1299570:CDS | 45.0% |
| TGAAAGAACCTGTCTCAGGA+AGG | + | chr8_3:60871649-60871668 | Msa1299570:CDS | 45.0% | |
| ACCTGTCTCAGGAAGGAAAA+TGG | + | chr8_3:60871656-60871675 | Msa1299570:CDS | 45.0% | |
| ! | TCCATTTTCCTTCCTGAGAC+AGG | - | chr8_3:60871660-60871679 | None:intergenic | 45.0% |
| CAGGAAGGAAAATGGAGTTG+TGG | + | chr8_3:60871664-60871683 | Msa1299570:CDS | 45.0% | |
| GAGTTGTGGTCAAACCAAGT+TGG | + | chr8_3:60871678-60871697 | Msa1299570:CDS | 45.0% | |
| CAAGTATGGTGGCATTGCTT+TGG | + | chr8_3:60871764-60871783 | Msa1299570:CDS | 45.0% | |
| ! | ACAACATCAGCCACTTTCCC+TGG | - | chr8_3:60870210-60870229 | None:intergenic | 50.0% |
| ACTGATGGAGTCTACTTCGG+TGG | + | chr8_3:60870455-60870474 | Msa1299570:CDS | 50.0% | |
| CGTGTGGCAAATAGGATTGG+AGG | + | chr8_3:60870488-60870507 | Msa1299570:CDS | 50.0% | |
| GATCATGGGAACACACTCCA+TGG | + | chr8_3:60870557-60870576 | Msa1299570:CDS | 50.0% | |
| GAAATTGCAGGTGGCCAGAA+AGG | + | chr8_3:60870689-60870708 | Msa1299570:intron | 50.0% | |
| CGTTATCACCGAACCCTTTC+TGG | - | chr8_3:60870706-60870725 | None:intergenic | 50.0% | |
| TGTTGCTGCGACTGCGTTTA+AGG | + | chr8_3:60870911-60870930 | Msa1299570:intron | 50.0% | |
| CATGCATACTGGAACCTAGG+AGG | + | chr8_3:60871393-60871412 | Msa1299570:CDS | 50.0% | |
| ! | CGGATTCGAGTTTGCCTGTT+GGG | - | chr8_3:60871497-60871516 | None:intergenic | 50.0% |
| ! | ACGGATTCGAGTTTGCCTGT+TGG | - | chr8_3:60871498-60871517 | None:intergenic | 50.0% |
| !! | GGCATTGCTTTGGAGACACA+AGG | + | chr8_3:60871774-60871793 | Msa1299570:CDS | 50.0% |
| CCAGGCTTCACAATCTGAGA+TGG | - | chr8_3:60871831-60871850 | None:intergenic | 50.0% | |
| CCATCTCAGATTGTGAAGCC+TGG | + | chr8_3:60871828-60871847 | Msa1299570:CDS | 50.0% | |
| ! | ACAACATCAGCCACTTTCCC+TGG | - | chr8_3:60870210-60870229 | None:intergenic | 50.0% |
| ACTGATGGAGTCTACTTCGG+TGG | + | chr8_3:60870455-60870474 | Msa1299570:CDS | 50.0% | |
| CGTGTGGCAAATAGGATTGG+AGG | + | chr8_3:60870488-60870507 | Msa1299570:CDS | 50.0% | |
| GATCATGGGAACACACTCCA+TGG | + | chr8_3:60870557-60870576 | Msa1299570:CDS | 50.0% | |
| GAAATTGCAGGTGGCCAGAA+AGG | + | chr8_3:60870689-60870708 | Msa1299570:intron | 50.0% | |
| CGTTATCACCGAACCCTTTC+TGG | - | chr8_3:60870706-60870725 | None:intergenic | 50.0% | |
| TGTTGCTGCGACTGCGTTTA+AGG | + | chr8_3:60870911-60870930 | Msa1299570:intron | 50.0% | |
| CATGCATACTGGAACCTAGG+AGG | + | chr8_3:60871393-60871412 | Msa1299570:CDS | 50.0% | |
| ! | CGGATTCGAGTTTGCCTGTT+GGG | - | chr8_3:60871497-60871516 | None:intergenic | 50.0% |
| ! | ACGGATTCGAGTTTGCCTGT+TGG | - | chr8_3:60871498-60871517 | None:intergenic | 50.0% |
| !! | GGCATTGCTTTGGAGACACA+AGG | + | chr8_3:60871774-60871793 | Msa1299570:CDS | 50.0% |
| CCAGGCTTCACAATCTGAGA+TGG | - | chr8_3:60871831-60871850 | None:intergenic | 50.0% | |
| CCATCTCAGATTGTGAAGCC+TGG | + | chr8_3:60871828-60871847 | Msa1299570:CDS | 50.0% | |
| GGGCGTGTGGCAAATAGGAT+TGG | + | chr8_3:60870485-60870504 | Msa1299570:CDS | 55.0% | |
| AACCTAGGAGGCCACAACAG+TGG | + | chr8_3:60871405-60871424 | Msa1299570:CDS | 55.0% | |
| GGGCGTGTGGCAAATAGGAT+TGG | + | chr8_3:60870485-60870504 | Msa1299570:CDS | 55.0% | |
| AACCTAGGAGGCCACAACAG+TGG | + | chr8_3:60871405-60871424 | Msa1299570:CDS | 55.0% | |
| TTGTGTCCTCTTGGGGCTCC+TGG | + | chr8_3:60869962-60869981 | Msa1299570:CDS | 60.0% | |
| TGTGAACCAGGAGCCCCAAG+AGG | - | chr8_3:60869971-60869990 | None:intergenic | 60.0% | |
| !! | CGGTGGTCTTATTGGGCGTG+TGG | + | chr8_3:60870472-60870491 | Msa1299570:CDS | 60.0% |
| GCAGGTGGCCAGAAAGGGTT+CGG | + | chr8_3:60870695-60870714 | Msa1299570:intron | 60.0% | |
| CACCACTGTTGTGGCCTCCT+AGG | - | chr8_3:60871410-60871429 | None:intergenic | 60.0% | |
| TTGTGTCCTCTTGGGGCTCC+TGG | + | chr8_3:60869962-60869981 | Msa1299570:CDS | 60.0% | |
| TGTGAACCAGGAGCCCCAAG+AGG | - | chr8_3:60869971-60869990 | None:intergenic | 60.0% | |
| !! | CGGTGGTCTTATTGGGCGTG+TGG | + | chr8_3:60870472-60870491 | Msa1299570:CDS | 60.0% |
| GCAGGTGGCCAGAAAGGGTT+CGG | + | chr8_3:60870695-60870714 | Msa1299570:intron | 60.0% | |
| CACCACTGTTGTGGCCTCCT+AGG | - | chr8_3:60871410-60871429 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 60869748 | 60872054 | 60869748 | ID=Msa1299570;Name=Msa1299570 |
| chr8_3 | mRNA | 60869748 | 60872054 | 60869748 | ID=Msa1299570-mRNA-1;Parent=Msa1299570;Name=Msa1299570-mRNA-1;_AED=0.05;_eAED=0.05;_QI=191|1|1|1|1|1|5|158|358 |
| chr8_3 | exon | 60869748 | 60870122 | 60869748 | ID=Msa1299570-mRNA-1:exon:17773;Parent=Msa1299570-mRNA-1 |
| chr8_3 | exon | 60870211 | 60870260 | 60870211 | ID=Msa1299570-mRNA-1:exon:17774;Parent=Msa1299570-mRNA-1 |
| chr8_3 | exon | 60870455 | 60870578 | 60870455 | ID=Msa1299570-mRNA-1:exon:17775;Parent=Msa1299570-mRNA-1 |
| chr8_3 | exon | 60870699 | 60870797 | 60870699 | ID=Msa1299570-mRNA-1:exon:17776;Parent=Msa1299570-mRNA-1 |
| chr8_3 | exon | 60871277 | 60872054 | 60871277 | ID=Msa1299570-mRNA-1:exon:17777;Parent=Msa1299570-mRNA-1 |
| chr8_3 | five_prime_UTR | 60869748 | 60869938 | 60869748 | ID=Msa1299570-mRNA-1:five_prime_utr;Parent=Msa1299570-mRNA-1 |
| chr8_3 | CDS | 60869939 | 60870122 | 60869939 | ID=Msa1299570-mRNA-1:cds;Parent=Msa1299570-mRNA-1 |
| chr8_3 | CDS | 60870211 | 60870260 | 60870211 | ID=Msa1299570-mRNA-1:cds;Parent=Msa1299570-mRNA-1 |
| chr8_3 | CDS | 60870455 | 60870578 | 60870455 | ID=Msa1299570-mRNA-1:cds;Parent=Msa1299570-mRNA-1 |
| chr8_3 | CDS | 60870699 | 60870797 | 60870699 | ID=Msa1299570-mRNA-1:cds;Parent=Msa1299570-mRNA-1 |
| chr8_3 | CDS | 60871277 | 60871896 | 60871277 | ID=Msa1299570-mRNA-1:cds;Parent=Msa1299570-mRNA-1 |
| chr8_3 | three_prime_UTR | 60871897 | 60872054 | 60871897 | ID=Msa1299570-mRNA-1:three_prime_utr;Parent=Msa1299570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
