Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1212800 | XP_013458000.1 | 97.429 | 389 | 10 | 0 | 2 | 390 | 3 | 391 | 0.0 | 788 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1212800 | sp|Q9C907|GDPD5_ARATH | 72.610 | 387 | 105 | 1 | 4 | 389 | 3 | 389 | 0.0 | 593 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1212800 | A0A072URQ0 | 97.429 | 389 | 10 | 0 | 2 | 390 | 3 | 391 | 0.0 | 788 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0175850 | Msa1212800 | -0.806644 | 7.440990e-50 | -8.615850e-47 |
| Msa1066870 | Msa1212800 | 0.802966 | 4.366255e-49 | -8.615850e-47 |
| Msa1212800 | Msa1213020 | 0.964937 | 5.844957e-124 | -8.615850e-47 |
| Msa1212800 | Msa1260200 | 0.986515 | 4.788129e-167 | -8.615850e-47 |
| Msa1212800 | Msa1300090 | 0.942171 | 1.152332e-101 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1212800 | MtrunA17_Chr4g0061511 | 97.429 | 389 | 10 | 0 | 2 | 390 | 3 | 391 | 0.0 | 788 |
| Msa1212800 | MtrunA17_Chr5g0445151 | 28.173 | 323 | 192 | 15 | 44 | 354 | 37 | 331 | 3.06e-18 | 86.7 |
| Msa1212800 | MtrunA17_Chr5g0445151 | 23.620 | 326 | 214 | 10 | 47 | 363 | 358 | 657 | 2.21e-17 | 84.3 |
| Msa1212800 | MtrunA17_Chr2g0304791 | 26.220 | 328 | 196 | 12 | 47 | 361 | 277 | 571 | 1.29e-17 | 84.7 |
| Msa1212800 | MtrunA17_Chr2g0304791 | 27.660 | 282 | 176 | 12 | 82 | 360 | 13 | 269 | 1.08e-12 | 69.7 |
| Msa1212800 | MtrunA17_Chr3g0100611 | 26.235 | 324 | 212 | 12 | 37 | 354 | 29 | 331 | 3.24e-16 | 80.5 |
| Msa1212800 | MtrunA17_Chr3g0100611 | 22.186 | 311 | 207 | 9 | 51 | 354 | 362 | 644 | 7.19e-13 | 70.1 |
| Msa1212800 | MtrunA17_Chr4g0074331 | 25.538 | 325 | 203 | 15 | 43 | 360 | 62 | 354 | 8.10e-15 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1212800 | AT1G74210.1 | 72.610 | 387 | 105 | 1 | 4 | 389 | 3 | 389 | 0.0 | 593 |
| Msa1212800 | AT5G08030.1 | 76.989 | 352 | 81 | 0 | 16 | 367 | 16 | 367 | 0.0 | 582 |
| Msa1212800 | AT5G08030.2 | 76.989 | 352 | 81 | 0 | 16 | 367 | 31 | 382 | 0.0 | 582 |
| Msa1212800 | AT4G26690.1 | 22.785 | 316 | 211 | 8 | 47 | 354 | 363 | 653 | 9.77e-18 | 85.9 |
| Msa1212800 | AT4G26690.1 | 24.471 | 331 | 192 | 10 | 44 | 354 | 44 | 336 | 5.18e-17 | 83.6 |
| Msa1212800 | AT1G66970.1 | 23.734 | 316 | 209 | 9 | 47 | 354 | 369 | 660 | 4.74e-17 | 83.6 |
| Msa1212800 | AT1G66970.1 | 27.273 | 330 | 198 | 14 | 37 | 354 | 43 | 342 | 6.00e-16 | 80.1 |
| Msa1212800 | AT1G66970.2 | 23.175 | 315 | 212 | 8 | 47 | 354 | 391 | 682 | 5.36e-17 | 83.6 |
| Msa1212800 | AT1G66970.2 | 27.245 | 323 | 193 | 14 | 44 | 354 | 72 | 364 | 1.17e-15 | 79.3 |
| Msa1212800 | AT5G55480.1 | 20.958 | 334 | 231 | 8 | 47 | 371 | 368 | 677 | 5.96e-17 | 83.2 |
| Msa1212800 | AT1G66970.3 | 23.175 | 315 | 212 | 8 | 47 | 354 | 175 | 466 | 6.50e-17 | 82.8 |
| Msa1212800 | AT3G20520.1 | 20.988 | 324 | 232 | 7 | 47 | 363 | 340 | 646 | 2.35e-15 | 78.2 |
| Msa1212800 | AT1G66980.3 | 24.051 | 316 | 207 | 9 | 47 | 354 | 372 | 662 | 5.35e-14 | 74.3 |
| Msa1212800 | AT1G66980.1 | 24.051 | 316 | 207 | 9 | 47 | 354 | 372 | 662 | 5.81e-14 | 74.3 |
| Msa1212800 | AT1G66980.2 | 24.051 | 316 | 207 | 9 | 47 | 354 | 401 | 691 | 6.34e-14 | 74.3 |
| Msa1212800 | AT1G66980.4 | 24.051 | 316 | 207 | 9 | 47 | 354 | 355 | 645 | 6.67e-14 | 73.9 |
Find 101 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGTTGTTTGCCGCGGAAAT+AGG | 0.120882 | 8_1:+72791688 | None:intergenic |
| CCCCTATGTGCAACGTTATA+TGG | 0.136452 | 8_1:+72790745 | None:intergenic |
| TGCAGTTGATTTCACATTAA+AGG | 0.140506 | 8_1:-72789661 | Msa1212800:intron |
| TGAATCAGAGGTTCAGCTTT+AGG | 0.246627 | 8_1:-72789620 | Msa1212800:CDS |
| GTTGAAACACTTCGGAAATA+TGG | 0.255128 | 8_1:-72788552 | Msa1212800:CDS |
| TGATTACTGGATCAACAAAA+TGG | 0.274727 | 8_1:-72787584 | Msa1212800:CDS |
| AAGCAATATGTTGTAGGAAT+TGG | 0.302113 | 8_1:-72788150 | Msa1212800:CDS |
| GTATCGTAGGAACGTGAAAA+TGG | 0.309244 | 8_1:+72791652 | None:intergenic |
| TATCTCAATGTCTTCGTTAT+CGG | 0.318763 | 8_1:-72791571 | Msa1212800:exon |
| ACATATAAGAACACCATCTT+TGG | 0.329743 | 8_1:+72790266 | None:intergenic |
| GAATCAGAGGTTCAGCTTTA+GGG | 0.347631 | 8_1:-72789619 | Msa1212800:CDS |
| AGAAACTCGCGAGGCATATC+TGG | 0.353981 | 8_1:-72790701 | Msa1212800:intron |
| TATGCCTCGCGAGTTTCTTC+AGG | 0.363128 | 8_1:+72790706 | None:intergenic |
| TCTTGTCATCTTGACGGTTA+GGG | 0.364460 | 8_1:+72787500 | None:intergenic |
| ATCTCAATGTCTTCGTTATC+GGG | 0.369178 | 8_1:-72791570 | Msa1212800:intron |
| GTCTTGTCATCTTGACGGTT+AGG | 0.371938 | 8_1:+72787499 | None:intergenic |
| TTCTCATTTCTGTACGTGTA+TGG | 0.378212 | 8_1:+72787652 | None:intergenic |
| CTTACAAGGAGTATGATTAC+TGG | 0.378731 | 8_1:-72787597 | Msa1212800:CDS |
| ATGATTATGTGCAGTCATAT+TGG | 0.381861 | 8_1:-72788206 | Msa1212800:intron |
| AGGCCTTTGTATCCACTTCC+TGG | 0.386639 | 8_1:-72790811 | Msa1212800:CDS |
| CGTTGTTTGCCGCGGAAATA+GGG | 0.389693 | 8_1:+72791689 | None:intergenic |
| CCCATATAACGTTGCACATA+GGG | 0.394571 | 8_1:-72790746 | Msa1212800:CDS |
| CTCCTTCGGATCTTGTTGCC+AGG | 0.400869 | 8_1:-72788080 | Msa1212800:CDS |
| GATATATACACAAGTGAAGT+TGG | 0.401531 | 8_1:+72788465 | None:intergenic |
| TGATTATGTGCAGTCATATT+GGG | 0.403241 | 8_1:-72788205 | Msa1212800:intron |
| ATCAACAAAATGGGAATTGA+TGG | 0.404261 | 8_1:-72787574 | Msa1212800:CDS |
| GATATAAATAACAGGTGAAA+TGG | 0.409069 | 8_1:-72788605 | Msa1212800:intron |
| TTGGATGCACCCAGAGTTGT+TGG | 0.424638 | 8_1:-72789126 | Msa1212800:CDS |
| CCCTATGTGCAACGTTATAT+GGG | 0.427804 | 8_1:+72790746 | None:intergenic |
| TACATAAAGCAATATGTTGT+AGG | 0.433660 | 8_1:-72788156 | Msa1212800:CDS |
| TTTAGGGATCAACAGTTTAA+CGG | 0.437378 | 8_1:-72789603 | Msa1212800:intron |
| TTCCTACTTACGTTCTAAAT+CGG | 0.439458 | 8_1:+72791743 | None:intergenic |
| GTTGCACATAGGGGCTCAAA+TGG | 0.451850 | 8_1:-72790736 | Msa1212800:CDS |
| ATGCAGTCTTGTCATCTTGA+CGG | 0.452860 | 8_1:+72787494 | None:intergenic |
| TACCAGTGAAATCTGTAAAC+AGG | 0.454717 | 8_1:+72787551 | None:intergenic |
| AGGATATATTCCAACAACTC+TGG | 0.460634 | 8_1:+72789116 | None:intergenic |
| CAGTAATCATACTCCTTGTA+AGG | 0.464985 | 8_1:+72787598 | None:intergenic |
| AGAGTTTATTACCATAGCAT+TGG | 0.469336 | 8_1:-72789145 | Msa1212800:CDS |
| CTTCCATGGTCACCTTTGCC+AGG | 0.470270 | 8_1:+72790793 | None:intergenic |
| GAAGAGGCTGCTTACTTCCA+TGG | 0.474342 | 8_1:+72790779 | None:intergenic |
| CATATTGCTTTATGTAGTCT+AGG | 0.476260 | 8_1:+72788163 | None:intergenic |
| GTCGGACGGCAAACGATTTG+AGG | 0.480583 | 8_1:-72788583 | Msa1212800:CDS |
| TGGTCACCTTTGCCAGGAAG+TGG | 0.486182 | 8_1:+72790799 | None:intergenic |
| GATTACTGGATCAACAAAAT+GGG | 0.486674 | 8_1:-72787583 | Msa1212800:CDS |
| GTTGAAGGGGTCATTACCAC+TGG | 0.486833 | 8_1:-72790165 | Msa1212800:CDS |
| ACATGCTGATTGATAAGTAC+TGG | 0.490440 | 8_1:+72789081 | None:intergenic |
| AAAAGAACATATGAAGTTGA+AGG | 0.491237 | 8_1:-72790180 | Msa1212800:CDS |
| TTCAACACAAGACACTAATC+AGG | 0.497899 | 8_1:-72788394 | Msa1212800:intron |
| ACGGCAAACGATTTGAGGAC+AGG | 0.499996 | 8_1:-72788578 | Msa1212800:CDS |
| AAGTAGGAACAAAGAAATGC+GGG | 0.504234 | 8_1:-72791729 | Msa1212800:five_prime_UTR |
| TTGAGTCTTCTTCGTATCGT+AGG | 0.509596 | 8_1:+72791639 | None:intergenic |
| GATATATTATCTTCCAAAGA+TGG | 0.509816 | 8_1:-72790279 | Msa1212800:CDS |
| TGTGTATATATCAAATCAAA+CGG | 0.510034 | 8_1:-72788454 | Msa1212800:CDS |
| CAACTATGTGATGACTCCTT+CGG | 0.513161 | 8_1:-72788094 | Msa1212800:CDS |
| GGATATATTCCAACAACTCT+GGG | 0.526903 | 8_1:+72789117 | None:intergenic |
| ACTTCGGAAATATGGATACA+AGG | 0.529530 | 8_1:-72788544 | Msa1212800:CDS |
| TCCTTCGGATCTTGTTGCCA+GGG | 0.530863 | 8_1:-72788079 | Msa1212800:CDS |
| ATGCGGGGAATATTCGTTTG+TGG | 0.532195 | 8_1:-72791713 | Msa1212800:five_prime_UTR |
| TGTAGGAATTGGACCTTGGA+AGG | 0.532490 | 8_1:-72788139 | Msa1212800:CDS |
| ATGTGTTGTGTTCGTCACTC+AGG | 0.533545 | 8_1:+72791610 | None:intergenic |
| AAAGAACATATGAAGTTGAA+GGG | 0.534240 | 8_1:-72790179 | Msa1212800:CDS |
| CTTTAGTCAAGATCCTTACA+AGG | 0.536799 | 8_1:-72787611 | Msa1212800:CDS |
| CTTGTCATCTTGACGGTTAG+GGG | 0.536985 | 8_1:+72787501 | None:intergenic |
| GCCCATATAACGTTGCACAT+AGG | 0.541427 | 8_1:-72790747 | Msa1212800:CDS |
| TTGTATCCACTTCCTGGCAA+AGG | 0.547465 | 8_1:-72790805 | Msa1212800:CDS |
| GTTCATACCTGTCAAAACAT+TGG | 0.548979 | 8_1:-72788521 | Msa1212800:CDS |
| GGCACATGCTCATAATCTGC+AGG | 0.551055 | 8_1:-72788058 | Msa1212800:intron |
| CTCAAATTATCATGACAACC+TGG | 0.553835 | 8_1:+72791787 | None:intergenic |
| TTGCAGAGAGCTATTGAGGA+AGG | 0.565109 | 8_1:-72790321 | Msa1212800:intron |
| TAAATAACAGGTGAAATGGT+CGG | 0.572543 | 8_1:-72788601 | Msa1212800:intron |
| TCTGGGTGCATCCAATGCTA+TGG | 0.574074 | 8_1:+72789134 | None:intergenic |
| TGAAGCTAGGATTACTGAGT+GGG | 0.576746 | 8_1:-72787195 | Msa1212800:three_prime_UTR |
| ACAGGTTTGTTGAAACACTT+CGG | 0.580004 | 8_1:-72788560 | Msa1212800:CDS |
| CAGATTATGAGCATGTGCCC+TGG | 0.581110 | 8_1:+72788062 | None:intergenic |
| CTTCCTGGCAAAGGTGACCA+TGG | 0.581158 | 8_1:-72790796 | Msa1212800:CDS |
| ATCACATAGTTGTTAACCAC+AGG | 0.582933 | 8_1:+72788105 | None:intergenic |
| GGCCTGTTTACAGATTTCAC+TGG | 0.586096 | 8_1:-72787553 | Msa1212800:CDS |
| TTGAAGCTAGGATTACTGAG+TGG | 0.587365 | 8_1:-72787196 | Msa1212800:three_prime_UTR |
| ATTAAAGTCGTTGTTTGCCG+CGG | 0.592518 | 8_1:+72791681 | None:intergenic |
| GCAAATGACTGTATAAATGC+AGG | 0.602676 | 8_1:+72788489 | None:intergenic |
| AACCGATTTAGAACGTAAGT+AGG | 0.609010 | 8_1:-72791745 | Msa1212800:five_prime_UTR |
| ATGTTGTAGGAATTGGACCT+TGG | 0.610872 | 8_1:-72788143 | Msa1212800:CDS |
| TATGGGCGAAAAGTTTGAAG+AGG | 0.612743 | 8_1:+72790763 | None:intergenic |
| AGTCGCTGAGGGTGAATCAG+AGG | 0.615291 | 8_1:-72789632 | Msa1212800:CDS |
| AAAGGAATTAAAGTCGCTGA+GGG | 0.619575 | 8_1:-72789643 | Msa1212800:CDS |
| ATAAGTTTAAAGTTGTATTG+CGG | 0.619609 | 8_1:-72787247 | Msa1212800:three_prime_UTR |
| TAAAGGAATTAAAGTCGCTG+AGG | 0.621868 | 8_1:-72789644 | Msa1212800:CDS |
| CCATATAACGTTGCACATAG+GGG | 0.625643 | 8_1:-72790745 | Msa1212800:CDS |
| TTTCTATTGCTCGTGATTGG+GGG | 0.629901 | 8_1:-72790841 | Msa1212800:CDS |
| CTTCGGAAATATGGATACAA+GGG | 0.630595 | 8_1:-72788543 | Msa1212800:CDS |
| AAGAACATATGAAGTTGAAG+GGG | 0.634583 | 8_1:-72790178 | Msa1212800:CDS |
| GAAGGATACTATAGTACCTG+TGG | 0.635202 | 8_1:-72788121 | Msa1212800:CDS |
| GGTACTATAGTATCCTTCCA+AGG | 0.636568 | 8_1:+72788126 | None:intergenic |
| TAACAGGTGAAATGGTCGGA+CGG | 0.639574 | 8_1:-72788597 | Msa1212800:intron |
| GCCCTGGCAACAAGATCCGA+AGG | 0.642209 | 8_1:+72788078 | None:intergenic |
| TTGCCAGGAAGTGGATACAA+AGG | 0.653361 | 8_1:+72790808 | None:intergenic |
| GTTTGTGGACCCTATTTCCG+CGG | 0.656130 | 8_1:-72791698 | Msa1212800:five_prime_UTR |
| TAAGTAGGAACAAAGAAATG+CGG | 0.661353 | 8_1:-72791730 | Msa1212800:five_prime_UTR |
| ACTTCCTGAAGAAACTCGCG+AGG | 0.669064 | 8_1:-72790710 | Msa1212800:CDS |
| TATTATCAAGAGTAACGTCG+TGG | 0.673707 | 8_1:+72790241 | None:intergenic |
| AGTAGGAACAAAGAAATGCG+GGG | 0.710560 | 8_1:-72791728 | Msa1212800:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAACAAATATCATTTTT+AGG | + | chr8_1:72788652-72788671 | None:intergenic | 10.0% |
| !! | ATTAAATTGATATAAATAAC+AGG | - | chr8_1:72790378-72790397 | Msa1212800:intron | 10.0% |
| !!! | TAAAAAAAACACAATTTTAG+CGG | + | chr8_1:72787598-72787617 | None:intergenic | 15.0% |
| !! | CATAAAACTATTATTTACTT+TGG | - | chr8_1:72789747-72789766 | Msa1212800:intron | 15.0% |
| !! | ATATAGATAGATAGATTAAG+TGG | - | chr8_1:72787627-72787646 | Msa1212800:CDS | 20.0% |
| !!! | TGCATTTTGAAATGAAAATT+GGG | + | chr8_1:72787663-72787682 | None:intergenic | 20.0% |
| !!! | ATGCATTTTGAAATGAAAAT+TGG | + | chr8_1:72787664-72787683 | None:intergenic | 20.0% |
| !! | TTAGTTAGTTAGTATGAAAA+TGG | - | chr8_1:72788012-72788031 | Msa1212800:intron | 20.0% |
| !! | TAGTTAGTTAGTATGAAAAT+GGG | - | chr8_1:72788013-72788032 | Msa1212800:intron | 20.0% |
| !! | ATTTCCTTCGTAAAATATAT+TGG | - | chr8_1:72788895-72788914 | Msa1212800:intron | 20.0% |
| !! | TTTCCTTCGTAAAATATATT+GGG | - | chr8_1:72788896-72788915 | Msa1212800:intron | 20.0% |
| !! | AATGGTAACTCAATAAATTA+AGG | + | chr8_1:72789116-72789135 | None:intergenic | 20.0% |
| !!! | TAGACGTATTTCTTAATTTT+AGG | - | chr8_1:72789146-72789165 | Msa1212800:CDS | 20.0% |
| !!! | AGACGTATTTCTTAATTTTA+GGG | - | chr8_1:72789147-72789166 | Msa1212800:CDS | 20.0% |
| !!! | ATTAATTGTGAACTATTTTG+TGG | - | chr8_1:72789487-72789506 | Msa1212800:intron | 20.0% |
| !!! | TGAACCATTTTAAAATCTAA+TGG | + | chr8_1:72789670-72789689 | None:intergenic | 20.0% |
| !!! | CATGATATGTTTTATAATCA+AGG | - | chr8_1:72790130-72790149 | Msa1212800:intron | 20.0% |
| !! | TTAGGATAATGATTATTGTA+CGG | - | chr8_1:72790179-72790198 | Msa1212800:CDS | 20.0% |
| !!! | GTGAGATTATGTTATATTTT+TGG | - | chr8_1:72790202-72790221 | Msa1212800:CDS | 20.0% |
| !! | TGTGTATATATCAAATCAAA+CGG | - | chr8_1:72790537-72790556 | Msa1212800:intron | 20.0% |
| !!! | TCATCGATTAAAAAAATCTT+AGG | + | chr8_1:72790568-72790587 | None:intergenic | 20.0% |
| !! | CAACATTGTATAACATTAAA+AGG | + | chr8_1:72790711-72790730 | None:intergenic | 20.0% |
| !!! | ATAAGTTTAAAGTTGTATTG+CGG | - | chr8_1:72791744-72791763 | Msa1212800:five_prime_UTR | 20.0% |
| !! | TTTATTAGCCTCTGTATAAA+TGG | - | chr8_1:72787477-72787496 | Msa1212800:CDS | 25.0% |
| ! | AATTGAAAATTGAAGCAAGT+TGG | + | chr8_1:72787520-72787539 | None:intergenic | 25.0% |
| !! | CTTGCTTCAATTTTCAATTT+TGG | - | chr8_1:72787521-72787540 | Msa1212800:CDS | 25.0% |
| ! | ATGATTAAGTTATGCAAGAA+TGG | - | chr8_1:72787736-72787755 | Msa1212800:intron | 25.0% |
| ! | ATGAAAAGAGAAACATTTGA+AGG | + | chr8_1:72787789-72787808 | None:intergenic | 25.0% |
| !!! | TTCTGCTTTTATCACTAATT+TGG | - | chr8_1:72787858-72787877 | Msa1212800:intron | 25.0% |
| !!! | TCTGCTTTTATCACTAATTT+GGG | - | chr8_1:72787859-72787878 | Msa1212800:intron | 25.0% |
| ! | GTGAAAAATAAATGAAGACA+AGG | + | chr8_1:72787915-72787934 | None:intergenic | 25.0% |
| ! | TGACAAATCATAAATGTAAC+AGG | - | chr8_1:72788111-72788130 | Msa1212800:CDS | 25.0% |
| ! | ATTATGCACAAACTAGTATT+TGG | - | chr8_1:72788571-72788590 | Msa1212800:CDS | 25.0% |
| ! | GATATATTATCTTCCAAAGA+TGG | - | chr8_1:72788712-72788731 | Msa1212800:intron | 25.0% |
| ! | AAAAGAACATATGAAGTTGA+AGG | - | chr8_1:72788811-72788830 | Msa1212800:intron | 25.0% |
| ! | AAAGAACATATGAAGTTGAA+GGG | - | chr8_1:72788812-72788831 | Msa1212800:intron | 25.0% |
| !!! | AAGACGTTTTATTTCTCAAT+AGG | - | chr8_1:72789174-72789193 | Msa1212800:intron | 25.0% |
| ! | AAAGAATGGAATATTGTTTC+TGG | + | chr8_1:72789244-72789263 | None:intergenic | 25.0% |
| ! | CATAACAATTCAAAGAAATG+AGG | + | chr8_1:72789466-72789485 | None:intergenic | 25.0% |
| !!! | TGACAGATTTTAATAAGAAC+TGG | - | chr8_1:72789555-72789574 | Msa1212800:intron | 25.0% |
| ! | TTGAGAATAAGATGAAGTAA+AGG | - | chr8_1:72789586-72789605 | Msa1212800:intron | 25.0% |
| !!! | AGCTCCATTAGATTTTAAAA+TGG | - | chr8_1:72789663-72789682 | Msa1212800:intron | 25.0% |
| ! | ATTCATACAATAAGATTGGA+GGG | + | chr8_1:72790017-72790036 | None:intergenic | 25.0% |
| ! | TCACATTCATACAATAAGAT+TGG | + | chr8_1:72790021-72790040 | None:intergenic | 25.0% |
| ! | ATCTTATTGTATGAATGTGA+TGG | - | chr8_1:72790021-72790040 | Msa1212800:intron | 25.0% |
| ! | TAGGATAATGATTATTGTAC+GGG | - | chr8_1:72790180-72790199 | Msa1212800:CDS | 25.0% |
| ! | GATATAAATAACAGGTGAAA+TGG | - | chr8_1:72790386-72790405 | Msa1212800:intron | 25.0% |
| ! | ATCAATTTGTAGAAGATCAA+GGG | + | chr8_1:72790650-72790669 | None:intergenic | 25.0% |
| !! | CATTACAGTACTATTTTGTT+AGG | + | chr8_1:72790768-72790787 | None:intergenic | 25.0% |
| ! | TACATAAAGCAATATGTTGT+AGG | - | chr8_1:72790835-72790854 | Msa1212800:CDS | 25.0% |
| ! | TAATCATATGAAGAGAAACA+AGG | + | chr8_1:72790977-72790996 | None:intergenic | 25.0% |
| ! | CTAGATAACAAATTAAAGGT+GGG | + | chr8_1:72791087-72791106 | None:intergenic | 25.0% |
| ! | TCTAGATAACAAATTAAAGG+TGG | + | chr8_1:72791088-72791107 | None:intergenic | 25.0% |
| ! | CACTCTAGATAACAAATTAA+AGG | + | chr8_1:72791091-72791110 | None:intergenic | 25.0% |
| !! | GTGTCATAAATGAATGTTTT+TGG | - | chr8_1:72791270-72791289 | Msa1212800:intron | 25.0% |
| ! | TAAAGTTGAAATGCAAAAAC+TGG | + | chr8_1:72791365-72791384 | None:intergenic | 25.0% |
| ! | CTCAAAAAATCATTCATAAG+CGG | + | chr8_1:72791556-72791575 | None:intergenic | 25.0% |
| !!! | GCTATTTTGTCTAAATACTA+AGG | - | chr8_1:72791677-72791696 | Msa1212800:five_prime_UTR | 25.0% |
| ! | ACATGAAAAATATTGAAGCT+AGG | - | chr8_1:72791783-72791802 | Msa1212800:five_prime_UTR | 25.0% |
| ! | TTCCTACTTACGTTCTAAAT+CGG | + | chr8_1:72787251-72787270 | None:intergenic | 30.0% |
| TAAGTAGGAACAAAGAAATG+CGG | - | chr8_1:72787261-72787280 | Msa1212800:three_prime_UTR | 30.0% | |
| TATCTCAATGTCTTCGTTAT+CGG | - | chr8_1:72787420-72787439 | Msa1212800:three_prime_UTR | 30.0% | |
| ACAATGATCCATTTATACAG+AGG | + | chr8_1:72787488-72787507 | None:intergenic | 30.0% | |
| !! | TGACTGTTGATTCAAATTGT+AGG | - | chr8_1:72787554-72787573 | Msa1212800:CDS | 30.0% |
| GCATTTCTACAATTGTGTAA+TGG | - | chr8_1:72787694-72787713 | Msa1212800:intron | 30.0% | |
| TAGTTAGTATGAAAATGGGT+TGG | - | chr8_1:72788017-72788036 | Msa1212800:intron | 30.0% | |
| ! | AGTTAGTATGAAAATGGGTT+GGG | - | chr8_1:72788018-72788037 | Msa1212800:intron | 30.0% |
| ACGAGCAATAGAAAAACAAA+AGG | + | chr8_1:72788144-72788163 | None:intergenic | 30.0% | |
| ! | TTTTTCTATTGCTCGTGATT+GGG | - | chr8_1:72788148-72788167 | Msa1212800:CDS | 30.0% |
| CAGATGTAAAGTAATGAGAA+AGG | + | chr8_1:72788350-72788369 | None:intergenic | 30.0% | |
| !! | TGTGGTGTCAATAGTTTTTA+AGG | - | chr8_1:72788403-72788422 | Msa1212800:CDS | 30.0% |
| ATATTGAGCTAATCAGTGTA+TGG | + | chr8_1:72788464-72788483 | None:intergenic | 30.0% | |
| !! | ATTGACGTCATTTTCAACTT+TGG | - | chr8_1:72788612-72788631 | Msa1212800:intron | 30.0% |
| ACATATAAGAACACCATCTT+TGG | + | chr8_1:72788728-72788747 | None:intergenic | 30.0% | |
| AAGAACATATGAAGTTGAAG+GGG | - | chr8_1:72788813-72788832 | Msa1212800:intron | 30.0% | |
| !!! | ATTACCACTGGATTTTTTGT+CGG | - | chr8_1:72788838-72788857 | Msa1212800:intron | 30.0% |
| TACGTCTATACAAAGCAAAA+TGG | + | chr8_1:72789134-72789153 | None:intergenic | 30.0% | |
| GAAAAAACTGGATGAAAGAA+TGG | + | chr8_1:72789258-72789277 | None:intergenic | 30.0% | |
| CTTGAAAGTGATGAAAAAAC+TGG | + | chr8_1:72789270-72789289 | None:intergenic | 30.0% | |
| ! | TGCAGTTGATTTCACATTAA+AGG | - | chr8_1:72789330-72789349 | Msa1212800:intron | 30.0% |
| TTTAGGGATCAACAGTTTAA+CGG | - | chr8_1:72789388-72789407 | Msa1212800:intron | 30.0% | |
| AAAGCTACTATGAGTAGAAA+GGG | + | chr8_1:72789419-72789438 | None:intergenic | 30.0% | |
| AAAAGCTACTATGAGTAGAA+AGG | + | chr8_1:72789420-72789439 | None:intergenic | 30.0% | |
| ! | ATGAGTTTAGAAGTACAAAG+TGG | + | chr8_1:72789513-72789532 | None:intergenic | 30.0% |
| AGAATAAGATGAAGTAAAGG+TGG | - | chr8_1:72789589-72789608 | Msa1212800:intron | 30.0% | |
| !! | GGTTCAATGATCATTTTTAC+TGG | - | chr8_1:72789684-72789703 | Msa1212800:intron | 30.0% |
| AAAAACAAGTAATCAGCAGA+CGG | + | chr8_1:72789712-72789731 | None:intergenic | 30.0% | |
| TAAGTCTATTGCCTTATCTT+TGG | - | chr8_1:72789786-72789805 | Msa1212800:intron | 30.0% | |
| TGAAAGAGATTCCAAAGATA+AGG | + | chr8_1:72789800-72789819 | None:intergenic | 30.0% | |
| !! | TTATCTTTGGAATCTCTTTC+AGG | - | chr8_1:72789799-72789818 | Msa1212800:intron | 30.0% |
| AGAGTTTATTACCATAGCAT+TGG | - | chr8_1:72789846-72789865 | Msa1212800:intron | 30.0% | |
| !!! | AGTACTGGATTTTTTATCTC+AGG | + | chr8_1:72789898-72789917 | None:intergenic | 30.0% |
| CATTCATACAATAAGATTGG+AGG | + | chr8_1:72790018-72790037 | None:intergenic | 30.0% | |
| TATTGTATGAATGTGATGGT+TGG | - | chr8_1:72790025-72790044 | Msa1212800:intron | 30.0% | |
| !! | TCCATGAGTTGATATTGTAA+CGG | - | chr8_1:72790069-72790088 | Msa1212800:intron | 30.0% |
| CATATGCACAATAAAAATGC+TGG | + | chr8_1:72790110-72790129 | None:intergenic | 30.0% | |
| ! | TGTGACTTTAGCTTAAGTTT+AGG | - | chr8_1:72790161-72790180 | Msa1212800:CDS | 30.0% |
| ! | TTTGGAATAAACATTCCAAC+AGG | + | chr8_1:72790272-72790291 | None:intergenic | 30.0% |
| TGTTGGAATGTTTATTCCAA+AGG | - | chr8_1:72790271-72790290 | Msa1212800:CDS | 30.0% | |
| ! | AGCATGAAATTTAAGACCTT+TGG | + | chr8_1:72790290-72790309 | None:intergenic | 30.0% |
| TAAATAACAGGTGAAATGGT+CGG | - | chr8_1:72790390-72790409 | Msa1212800:intron | 30.0% | |
| GATATATACACAAGTGAAGT+TGG | + | chr8_1:72790529-72790548 | None:intergenic | 30.0% | |
| ! | GTGAGTAATGTATTTTACCT+TGG | - | chr8_1:72790619-72790638 | Msa1212800:intron | 30.0% |
| CATCAATTTGTAGAAGATCA+AGG | + | chr8_1:72790651-72790670 | None:intergenic | 30.0% | |
| ! | AGTACTATTTTGTTAGGCTT+TGG | + | chr8_1:72790762-72790781 | None:intergenic | 30.0% |
| ATGATTATGTGCAGTCATAT+TGG | - | chr8_1:72790785-72790804 | Msa1212800:CDS | 30.0% | |
| TGATTATGTGCAGTCATATT+GGG | - | chr8_1:72790786-72790805 | Msa1212800:CDS | 30.0% | |
| CATATTGCTTTATGTAGTCT+AGG | + | chr8_1:72790831-72790850 | None:intergenic | 30.0% | |
| AAGCAATATGTTGTAGGAAT+TGG | - | chr8_1:72790841-72790860 | Msa1212800:CDS | 30.0% | |
| TGATTACTGGATCAACAAAA+TGG | - | chr8_1:72791407-72791426 | Msa1212800:intron | 30.0% | |
| GATTACTGGATCAACAAAAT+GGG | - | chr8_1:72791408-72791427 | Msa1212800:intron | 30.0% | |
| ATCAACAAAATGGGAATTGA+TGG | - | chr8_1:72791417-72791436 | Msa1212800:intron | 30.0% | |
| ! | TGGTAGTCTTCATAATTTTC+AGG | - | chr8_1:72791458-72791477 | Msa1212800:intron | 30.0% |
| !! | GTCTTCATAATTTTCAGGAA+TGG | - | chr8_1:72791463-72791482 | Msa1212800:intron | 30.0% |
| !!! | CGCTTATGAATGATTTTTTG+AGG | - | chr8_1:72791554-72791573 | Msa1212800:intron | 30.0% |
| ! | GTAAAAAAAAAGCATGTGCT+TGG | - | chr8_1:72791590-72791609 | Msa1212800:five_prime_UTR | 30.0% |
| CATGACAACCTGGAAAAAAA+AGG | + | chr8_1:72787197-72787216 | None:intergenic | 35.0% | |
| CTCAAATTATCATGACAACC+TGG | + | chr8_1:72787207-72787226 | None:intergenic | 35.0% | |
| ! | AACCGATTTAGAACGTAAGT+AGG | - | chr8_1:72787246-72787265 | Msa1212800:three_prime_UTR | 35.0% |
| AAGTAGGAACAAAGAAATGC+GGG | - | chr8_1:72787262-72787281 | Msa1212800:three_prime_UTR | 35.0% | |
| ATCTCAATGTCTTCGTTATC+GGG | - | chr8_1:72787421-72787440 | Msa1212800:three_prime_UTR | 35.0% | |
| !! | GAAAATTGAAGCAAGTTGGT+TGG | + | chr8_1:72787516-72787535 | None:intergenic | 35.0% |
| ATAGATAGATTAAGTGGCCA+AGG | - | chr8_1:72787633-72787652 | Msa1212800:CDS | 35.0% | |
| TAGATAGATTAAGTGGCCAA+GGG | - | chr8_1:72787634-72787653 | Msa1212800:CDS | 35.0% | |
| AATGAAAATTGGGTTTCCCT+TGG | + | chr8_1:72787653-72787672 | None:intergenic | 35.0% | |
| ! | AGAAACATTTGAAGGCATGA+AGG | + | chr8_1:72787781-72787800 | None:intergenic | 35.0% |
| ! | TCTTTTCATGAATCCCTAAC+TGG | - | chr8_1:72787800-72787819 | Msa1212800:intron | 35.0% |
| ACACAGATCTAATCCAGTTA+GGG | + | chr8_1:72787816-72787835 | None:intergenic | 35.0% | |
| AGCATGAGATGATATACCAA+TGG | + | chr8_1:72787839-72787858 | None:intergenic | 35.0% | |
| CAGTTAGAGTTACTGATGAT+CGG | + | chr8_1:72787973-72787992 | None:intergenic | 35.0% | |
| ! | TAACTCTAACTGGCTTATCA+GGG | - | chr8_1:72787981-72788000 | Msa1212800:intron | 35.0% |
| ! | ATGATTTGTCACACCAAGTT+GGG | + | chr8_1:72788102-72788121 | None:intergenic | 35.0% |
| ! | TATGATTTGTCACACCAAGT+TGG | + | chr8_1:72788103-72788122 | None:intergenic | 35.0% |
| ! | GTTTTTCTATTGCTCGTGAT+TGG | - | chr8_1:72788147-72788166 | Msa1212800:CDS | 35.0% |
| ! | TTTTCTATTGCTCGTGATTG+GGG | - | chr8_1:72788149-72788168 | Msa1212800:CDS | 35.0% |
| ! | ATTTTGCCAGAAGAGTTATG+TGG | + | chr8_1:72788321-72788340 | None:intergenic | 35.0% |
| !!! | AATAGTTTTTAAGGTGCCCA+TGG | - | chr8_1:72788412-72788431 | Msa1212800:CDS | 35.0% |
| GTTTGTGCATAATTGTAGCA+TGG | + | chr8_1:72788564-72788583 | None:intergenic | 35.0% | |
| !!! | TTTTTTGCAGAGAGCTATTG+AGG | - | chr8_1:72788666-72788685 | Msa1212800:intron | 35.0% |
| TATTATCAAGAGTAACGTCG+TGG | + | chr8_1:72788753-72788772 | None:intergenic | 35.0% | |
| ! | CCTCCCAATATATTTTACGA+AGG | + | chr8_1:72788902-72788921 | None:intergenic | 35.0% |
| CCTTCGTAAAATATATTGGG+AGG | - | chr8_1:72788899-72788918 | Msa1212800:intron | 35.0% | |
| !! | ATTTCTAGTGACACCTATTC+TGG | - | chr8_1:72788981-72789000 | Msa1212800:intron | 35.0% |
| ! | ACTTTTATTGAACGTCCTCT+TGG | - | chr8_1:72789031-72789050 | Msa1212800:intron | 35.0% |
| ! | CTTTTATTGAACGTCCTCTT+GGG | - | chr8_1:72789032-72789051 | Msa1212800:intron | 35.0% |
| !! | AATTTGTTAAGATGCCCAAG+AGG | + | chr8_1:72789049-72789068 | None:intergenic | 35.0% |
| CTTGGGCATCTTAACAAATT+TGG | - | chr8_1:72789049-72789068 | Msa1212800:intron | 35.0% | |
| TAAAGGAATTAAAGTCGCTG+AGG | - | chr8_1:72789347-72789366 | Msa1212800:intron | 35.0% | |
| AAAGGAATTAAAGTCGCTGA+GGG | - | chr8_1:72789348-72789367 | Msa1212800:intron | 35.0% | |
| AGGTGGAAATATCCTTTACA+AGG | - | chr8_1:72789606-72789625 | Msa1212800:CDS | 35.0% | |
| !! | AAAGGAGAGTATCCTTGTAA+AGG | + | chr8_1:72789621-72789640 | None:intergenic | 35.0% |
| CGCATGTATAAGAGAAGAAA+AGG | + | chr8_1:72789639-72789658 | None:intergenic | 35.0% | |
| TAGACTTAGCCATTTCAATG+CGG | + | chr8_1:72789774-72789793 | None:intergenic | 35.0% | |
| GGATATATTCCAACAACTCT+GGG | + | chr8_1:72789877-72789896 | None:intergenic | 35.0% | |
| AGGATATATTCCAACAACTC+TGG | + | chr8_1:72789878-72789897 | None:intergenic | 35.0% | |
| ! | ACATGCTGATTGATAAGTAC+TGG | + | chr8_1:72789913-72789932 | None:intergenic | 35.0% |
| ATCCAATAAACTTCTGTCTG+TGG | - | chr8_1:72789950-72789969 | Msa1212800:intron | 35.0% | |
| TCCGTTACAATATCAACTCA+TGG | + | chr8_1:72790073-72790092 | None:intergenic | 35.0% | |
| TTTGGAAGTTTCGAAAGATC+CGG | - | chr8_1:72790220-72790239 | Msa1212800:CDS | 35.0% | |
| AATCCTCTCTTAGTACAATC+CGG | + | chr8_1:72790242-72790261 | None:intergenic | 35.0% | |
| ! | AGAGGATTTTTATCACCTGT+TGG | - | chr8_1:72790254-72790273 | Msa1212800:CDS | 35.0% |
| ! | CTTTTAGTCCATTTCCTTAG+AGG | - | chr8_1:72790338-72790357 | Msa1212800:intron | 35.0% |
| !! | ACAGGTTTGTTGAAACACTT+CGG | - | chr8_1:72790431-72790450 | Msa1212800:intron | 35.0% |
| GTTGAAACACTTCGGAAATA+TGG | - | chr8_1:72790439-72790458 | Msa1212800:intron | 35.0% | |
| ACTTCGGAAATATGGATACA+AGG | - | chr8_1:72790447-72790466 | Msa1212800:intron | 35.0% | |
| CTTCGGAAATATGGATACAA+GGG | - | chr8_1:72790448-72790467 | Msa1212800:intron | 35.0% | |
| GTTCATACCTGTCAAAACAT+TGG | - | chr8_1:72790470-72790489 | Msa1212800:intron | 35.0% | |
| !!! | GTTTCAACCAATGTTTTGAC+AGG | + | chr8_1:72790480-72790499 | None:intergenic | 35.0% |
| GCAAATGACTGTATAAATGC+AGG | + | chr8_1:72790505-72790524 | None:intergenic | 35.0% | |
| TTCAACACAAGACACTAATC+AGG | - | chr8_1:72790597-72790616 | Msa1212800:intron | 35.0% | |
| ATCACATAGTTGTTAACCAC+AGG | + | chr8_1:72790889-72790908 | None:intergenic | 35.0% | |
| !! | CCACACAATCTTTTGAAGAT+TGG | + | chr8_1:72791010-72791029 | None:intergenic | 35.0% |
| CCAATCTTCAAAAGATTGTG+TGG | - | chr8_1:72791007-72791026 | Msa1212800:intron | 35.0% | |
| AGTGCAGTGATATGTCATAA+CGG | - | chr8_1:72791107-72791126 | Msa1212800:intron | 35.0% | |
| TTGTGCTAAATGGCATATCA+CGG | + | chr8_1:72791156-72791175 | None:intergenic | 35.0% | |
| !! | ATGATTGTTGATGATGATGC+AGG | - | chr8_1:72791311-72791330 | Msa1212800:intron | 35.0% |
| TTCTCATTTCTGTACGTGTA+TGG | + | chr8_1:72791342-72791361 | None:intergenic | 35.0% | |
| CTTTAGTCAAGATCCTTACA+AGG | - | chr8_1:72791380-72791399 | Msa1212800:intron | 35.0% | |
| CAGTAATCATACTCCTTGTA+AGG | + | chr8_1:72791396-72791415 | None:intergenic | 35.0% | |
| ! | CTTACAAGGAGTATGATTAC+TGG | - | chr8_1:72791394-72791413 | Msa1212800:intron | 35.0% |
| TACCAGTGAAATCTGTAAAC+AGG | + | chr8_1:72791443-72791462 | None:intergenic | 35.0% | |
| !!! | TGATTTTTTGAGGTGTCAGA+TGG | - | chr8_1:72791564-72791583 | Msa1212800:intron | 35.0% |
| AGTAGGAACAAAGAAATGCG+GGG | - | chr8_1:72787263-72787282 | Msa1212800:three_prime_UTR | 40.0% | |
| ATTAAAGTCGTTGTTTGCCG+CGG | + | chr8_1:72787313-72787332 | None:intergenic | 40.0% | |
| GTATCGTAGGAACGTGAAAA+TGG | + | chr8_1:72787342-72787361 | None:intergenic | 40.0% | |
| TTGAGTCTTCTTCGTATCGT+AGG | + | chr8_1:72787355-72787374 | None:intergenic | 40.0% | |
| !! | ATTGAAGCAAGTTGGTTGGT+TGG | + | chr8_1:72787512-72787531 | None:intergenic | 40.0% |
| GACACAGATCTAATCCAGTT+AGG | + | chr8_1:72787817-72787836 | None:intergenic | 40.0% | |
| ! | TGGATTAGATCTGTGTCCAT+TGG | - | chr8_1:72787820-72787839 | Msa1212800:intron | 40.0% |
| CGATCATCAGTAACTCTAAC+TGG | - | chr8_1:72787971-72787990 | Msa1212800:intron | 40.0% | |
| ! | GTAACTCTAACTGGCTTATC+AGG | - | chr8_1:72787980-72787999 | Msa1212800:intron | 40.0% |
| !! | AGTATGAAAATGGGTTGGGT+TGG | - | chr8_1:72788022-72788041 | Msa1212800:intron | 40.0% |
| CAGCTAAATATCTCCCAACT+TGG | - | chr8_1:72788086-72788105 | Msa1212800:CDS | 40.0% | |
| TTTCTATTGCTCGTGATTGG+GGG | - | chr8_1:72788150-72788169 | Msa1212800:CDS | 40.0% | |
| TATGGGCGAAAAGTTTGAAG+AGG | + | chr8_1:72788231-72788250 | None:intergenic | 40.0% | |
| CCCTATGTGCAACGTTATAT+GGG | + | chr8_1:72788248-72788267 | None:intergenic | 40.0% | |
| CCCATATAACGTTGCACATA+GGG | - | chr8_1:72788245-72788264 | Msa1212800:intron | 40.0% | |
| CCATATAACGTTGCACATAG+GGG | - | chr8_1:72788246-72788265 | Msa1212800:intron | 40.0% | |
| GTGAATCCACATAACTCTTC+TGG | - | chr8_1:72788312-72788331 | Msa1212800:intron | 40.0% | |
| GCTAATCAGTGTATGGTCAA+TGG | + | chr8_1:72788457-72788476 | None:intergenic | 40.0% | |
| !! | AGTACCGACAAAAAATCCAG+TGG | + | chr8_1:72788845-72788864 | None:intergenic | 40.0% |
| ! | ATGAGCTGACTTTCCAGAAT+AGG | + | chr8_1:72788997-72789016 | None:intergenic | 40.0% |
| TGAATCAGAGGTTCAGCTTT+AGG | - | chr8_1:72789371-72789390 | Msa1212800:intron | 40.0% | |
| GAATCAGAGGTTCAGCTTTA+GGG | - | chr8_1:72789372-72789391 | Msa1212800:intron | 40.0% | |
| AGACTTAGCCATTTCAATGC+GGG | + | chr8_1:72789773-72789792 | None:intergenic | 40.0% | |
| TGCCACAGACAGAAGTTTAT+TGG | + | chr8_1:72789955-72789974 | None:intergenic | 40.0% | |
| ATGTTGTAGGAATTGGACCT+TGG | - | chr8_1:72790848-72790867 | Msa1212800:CDS | 40.0% | |
| GGTACTATAGTATCCTTCCA+AGG | + | chr8_1:72790868-72790887 | None:intergenic | 40.0% | |
| GAAGGATACTATAGTACCTG+TGG | - | chr8_1:72790870-72790889 | Msa1212800:intron | 40.0% | |
| CAACTATGTGATGACTCCTT+CGG | - | chr8_1:72790897-72790916 | Msa1212800:intron | 40.0% | |
| TGGCAACACTTTGTGCTAAA+TGG | + | chr8_1:72791166-72791185 | None:intergenic | 40.0% | |
| !! | CACAAAGTGTTGCCAAATAG+TGG | - | chr8_1:72791171-72791190 | Msa1212800:intron | 40.0% |
| ! | GAGCAAACCAGTATTTTCTG+CGG | - | chr8_1:72791223-72791242 | Msa1212800:intron | 40.0% |
| TATTGGACCGCAGAAAATAC+TGG | + | chr8_1:72791233-72791252 | None:intergenic | 40.0% | |
| TCGAGCAGTGTTGTCAATAT+TGG | + | chr8_1:72791250-72791269 | None:intergenic | 40.0% | |
| TCTTGTCATCTTGACGGTTA+GGG | + | chr8_1:72791494-72791513 | None:intergenic | 40.0% | |
| ! | ATGCAGTCTTGTCATCTTGA+CGG | + | chr8_1:72791500-72791519 | None:intergenic | 40.0% |
| TTGAAGCTAGGATTACTGAG+TGG | - | chr8_1:72791795-72791814 | Msa1212800:five_prime_UTR | 40.0% | |
| TGAAGCTAGGATTACTGAGT+GGG | - | chr8_1:72791796-72791815 | Msa1212800:five_prime_UTR | 40.0% | |
| ATGCGGGGAATATTCGTTTG+TGG | - | chr8_1:72787278-72787297 | Msa1212800:three_prime_UTR | 45.0% | |
| ATGTGTTGTGTTCGTCACTC+AGG | + | chr8_1:72787384-72787403 | None:intergenic | 45.0% | |
| TTGCCAGGAAGTGGATACAA+AGG | + | chr8_1:72788186-72788205 | None:intergenic | 45.0% | |
| TTGTATCCACTTCCTGGCAA+AGG | - | chr8_1:72788186-72788205 | Msa1212800:CDS | 45.0% | |
| GCCCATATAACGTTGCACAT+AGG | - | chr8_1:72788244-72788263 | Msa1212800:intron | 45.0% | |
| CCCCTATGTGCAACGTTATA+TGG | + | chr8_1:72788249-72788268 | None:intergenic | 45.0% | |
| TATGCAGCACAGTGAACCAT+GGG | + | chr8_1:72788431-72788450 | None:intergenic | 45.0% | |
| ATATGCAGCACAGTGAACCA+TGG | + | chr8_1:72788432-72788451 | None:intergenic | 45.0% | |
| TTGCAGAGAGCTATTGAGGA+AGG | - | chr8_1:72788670-72788689 | Msa1212800:intron | 45.0% | |
| TACTTTGGCCCGCATTGAAA+TGG | - | chr8_1:72789762-72789781 | Msa1212800:intron | 45.0% | |
| ! | ATGAATGTGATGGTTGGTGC+TGG | - | chr8_1:72790031-72790050 | Msa1212800:intron | 45.0% |
| GATCCGGATTGTACTAAGAG+AGG | - | chr8_1:72790236-72790255 | Msa1212800:CDS | 45.0% | |
| AAGAAAGCAGACAGCCTCTA+AGG | + | chr8_1:72790355-72790374 | None:intergenic | 45.0% | |
| TAACAGGTGAAATGGTCGGA+CGG | - | chr8_1:72790394-72790413 | Msa1212800:intron | 45.0% | |
| GAAGATCAAGGGATAAGCCA+AGG | + | chr8_1:72790639-72790658 | None:intergenic | 45.0% | |
| TGTAGGAATTGGACCTTGGA+AGG | - | chr8_1:72790852-72790871 | Msa1212800:CDS | 45.0% | |
| GGCCTGTTTACAGATTTCAC+TGG | - | chr8_1:72791438-72791457 | Msa1212800:intron | 45.0% | |
| CTTGTCATCTTGACGGTTAG+GGG | + | chr8_1:72791493-72791512 | None:intergenic | 45.0% | |
| GTCTTGTCATCTTGACGGTT+AGG | + | chr8_1:72791495-72791514 | None:intergenic | 45.0% | |
| !!! | ACATTTTTAAAAATATAATT+TGG | + | chr8_1:72788386-72788405 | None:intergenic | 5.0% |
| !!! | AAATTATATTTTTAAAAATG+TGG | - | chr8_1:72788385-72788404 | Msa1212800:intron | 5.0% |
| GTTTGTGGACCCTATTTCCG+CGG | - | chr8_1:72787293-72787312 | Msa1212800:three_prime_UTR | 50.0% | |
| CGTTGTTTGCCGCGGAAATA+GGG | + | chr8_1:72787305-72787324 | None:intergenic | 50.0% | |
| TCGTTGTTTGCCGCGGAAAT+AGG | + | chr8_1:72787306-72787325 | None:intergenic | 50.0% | |
| AGGCCTTTGTATCCACTTCC+TGG | - | chr8_1:72788180-72788199 | Msa1212800:CDS | 50.0% | |
| GAAGAGGCTGCTTACTTCCA+TGG | + | chr8_1:72788215-72788234 | None:intergenic | 50.0% | |
| GTTGCACATAGGGGCTCAAA+TGG | - | chr8_1:72788255-72788274 | Msa1212800:intron | 50.0% | |
| ACTTCCTGAAGAAACTCGCG+AGG | - | chr8_1:72788281-72788300 | Msa1212800:intron | 50.0% | |
| TATGCCTCGCGAGTTTCTTC+AGG | + | chr8_1:72788288-72788307 | None:intergenic | 50.0% | |
| AGAAACTCGCGAGGCATATC+TGG | - | chr8_1:72788290-72788309 | Msa1212800:intron | 50.0% | |
| GTTGAAGGGGTCATTACCAC+TGG | - | chr8_1:72788826-72788845 | Msa1212800:intron | 50.0% | |
| TCTGGGTGCATCCAATGCTA+TGG | + | chr8_1:72789860-72789879 | None:intergenic | 50.0% | |
| TTGGATGCACCCAGAGTTGT+TGG | - | chr8_1:72789865-72789884 | Msa1212800:intron | 50.0% | |
| ! | GCAGACAGCCTCTAAGGAAA+TGG | + | chr8_1:72790349-72790368 | None:intergenic | 50.0% |
| ACGGCAAACGATTTGAGGAC+AGG | - | chr8_1:72790413-72790432 | Msa1212800:intron | 50.0% | |
| TCCTTCGGATCTTGTTGCCA+GGG | - | chr8_1:72790912-72790931 | Msa1212800:intron | 50.0% | |
| CAGATTATGAGCATGTGCCC+TGG | + | chr8_1:72790932-72790951 | None:intergenic | 50.0% | |
| GGCACATGCTCATAATCTGC+AGG | - | chr8_1:72790933-72790952 | Msa1212800:intron | 50.0% | |
| ! | AGTGCTGTTGCGCCACTATT+TGG | + | chr8_1:72791186-72791205 | None:intergenic | 50.0% |
| ATTGCTCGTGATTGGGGGCA+CGG | - | chr8_1:72788155-72788174 | Msa1212800:CDS | 55.0% | |
| TGGTCACCTTTGCCAGGAAG+TGG | + | chr8_1:72788195-72788214 | None:intergenic | 55.0% | |
| CTTCCTGGCAAAGGTGACCA+TGG | - | chr8_1:72788195-72788214 | Msa1212800:CDS | 55.0% | |
| CTTCCATGGTCACCTTTGCC+AGG | + | chr8_1:72788201-72788220 | None:intergenic | 55.0% | |
| AGTCGCTGAGGGTGAATCAG+AGG | - | chr8_1:72789359-72789378 | Msa1212800:intron | 55.0% | |
| GTCGGACGGCAAACGATTTG+AGG | - | chr8_1:72790408-72790427 | Msa1212800:intron | 55.0% | |
| CTCCTTCGGATCTTGTTGCC+AGG | - | chr8_1:72790911-72790930 | Msa1212800:intron | 55.0% | |
| GCCCTGGCAACAAGATCCGA+AGG | + | chr8_1:72790916-72790935 | None:intergenic | 60.0% | |
| GGCGCAACAGCACTGTAGCA+TGG | - | chr8_1:72791192-72791211 | Msa1212800:intron | 60.0% | |
| ! | TCGTGATTGGGGGCACGGCT+AGG | - | chr8_1:72788160-72788179 | Msa1212800:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 72787189 | 72791824 | 72787189 | ID=Msa1212800;Name=Msa1212800 |
| chr8_1 | mRNA | 72787189 | 72791824 | 72787189 | ID=Msa1212800-mRNA-1;Parent=Msa1212800;Name=Msa1212800-mRNA-1;_AED=0.13;_eAED=0.13;_QI=238|1|1|1|0.85|0.87|8|258|390 |
| chr8_1 | exon | 72787189 | 72787680 | 72787189 | ID=Msa1212800-mRNA-1:exon:24643;Parent=Msa1212800-mRNA-1 |
| chr8_1 | exon | 72788059 | 72788214 | 72788059 | ID=Msa1212800-mRNA-1:exon:24642;Parent=Msa1212800-mRNA-1 |
| chr8_1 | exon | 72788395 | 72788613 | 72788395 | ID=Msa1212800-mRNA-1:exon:24641;Parent=Msa1212800-mRNA-1 |
| chr8_1 | exon | 72789083 | 72789192 | 72789083 | ID=Msa1212800-mRNA-1:exon:24640;Parent=Msa1212800-mRNA-1 |
| chr8_1 | exon | 72789604 | 72789678 | 72789604 | ID=Msa1212800-mRNA-1:exon:24639;Parent=Msa1212800-mRNA-1 |
| chr8_1 | exon | 72790154 | 72790337 | 72790154 | ID=Msa1212800-mRNA-1:exon:24638;Parent=Msa1212800-mRNA-1 |
| chr8_1 | exon | 72790702 | 72790880 | 72790702 | ID=Msa1212800-mRNA-1:exon:24637;Parent=Msa1212800-mRNA-1 |
| chr8_1 | exon | 72791571 | 72791824 | 72791571 | ID=Msa1212800-mRNA-1:exon:24636;Parent=Msa1212800-mRNA-1 |
| chr8_1 | five_prime_UTR | 72791587 | 72791824 | 72791587 | ID=Msa1212800-mRNA-1:five_prime_utr;Parent=Msa1212800-mRNA-1 |
| chr8_1 | CDS | 72791571 | 72791586 | 72791571 | ID=Msa1212800-mRNA-1:cds;Parent=Msa1212800-mRNA-1 |
| chr8_1 | CDS | 72790702 | 72790880 | 72790702 | ID=Msa1212800-mRNA-1:cds;Parent=Msa1212800-mRNA-1 |
| chr8_1 | CDS | 72790154 | 72790337 | 72790154 | ID=Msa1212800-mRNA-1:cds;Parent=Msa1212800-mRNA-1 |
| chr8_1 | CDS | 72789604 | 72789678 | 72789604 | ID=Msa1212800-mRNA-1:cds;Parent=Msa1212800-mRNA-1 |
| chr8_1 | CDS | 72789083 | 72789192 | 72789083 | ID=Msa1212800-mRNA-1:cds;Parent=Msa1212800-mRNA-1 |
| chr8_1 | CDS | 72788395 | 72788613 | 72788395 | ID=Msa1212800-mRNA-1:cds;Parent=Msa1212800-mRNA-1 |
| chr8_1 | CDS | 72788059 | 72788214 | 72788059 | ID=Msa1212800-mRNA-1:cds;Parent=Msa1212800-mRNA-1 |
| chr8_1 | CDS | 72787447 | 72787680 | 72787447 | ID=Msa1212800-mRNA-1:cds;Parent=Msa1212800-mRNA-1 |
| chr8_1 | three_prime_UTR | 72787189 | 72787446 | 72787189 | ID=Msa1212800-mRNA-1:three_prime_utr;Parent=Msa1212800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
