Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260200 | XP_013458000.1 | 97.429 | 389 | 10 | 0 | 2 | 390 | 3 | 391 | 0.0 | 788 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260200 | sp|Q9C907|GDPD5_ARATH | 72.610 | 387 | 105 | 1 | 4 | 389 | 3 | 389 | 0.0 | 593 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260200 | A0A072URQ0 | 97.429 | 389 | 10 | 0 | 2 | 390 | 3 | 391 | 0.0 | 788 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0784620 | Msa1260200 | 0.805478 | 1.309501e-49 | -8.615850e-47 |
| Msa0175850 | Msa1260200 | -0.817898 | 2.597357e-52 | -8.615850e-47 |
| Msa1260200 | Msa1300090 | 0.952442 | 2.403132e-110 | -8.615850e-47 |
| Msa1066870 | Msa1260200 | 0.808850 | 2.529318e-50 | -8.615850e-47 |
| Msa1212800 | Msa1260200 | 0.986515 | 4.788129e-167 | -8.615850e-47 |
| Msa1213020 | Msa1260200 | 0.958549 | 1.790924e-116 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260200 | MtrunA17_Chr4g0061511 | 97.429 | 389 | 10 | 0 | 2 | 390 | 3 | 391 | 0.0 | 788 |
| Msa1260200 | MtrunA17_Chr5g0445151 | 28.173 | 323 | 192 | 15 | 44 | 354 | 37 | 331 | 3.06e-18 | 86.7 |
| Msa1260200 | MtrunA17_Chr5g0445151 | 23.620 | 326 | 214 | 10 | 47 | 363 | 358 | 657 | 2.21e-17 | 84.3 |
| Msa1260200 | MtrunA17_Chr2g0304791 | 26.220 | 328 | 196 | 12 | 47 | 361 | 277 | 571 | 1.29e-17 | 84.7 |
| Msa1260200 | MtrunA17_Chr2g0304791 | 27.660 | 282 | 176 | 12 | 82 | 360 | 13 | 269 | 1.08e-12 | 69.7 |
| Msa1260200 | MtrunA17_Chr3g0100611 | 26.235 | 324 | 212 | 12 | 37 | 354 | 29 | 331 | 3.24e-16 | 80.5 |
| Msa1260200 | MtrunA17_Chr3g0100611 | 22.186 | 311 | 207 | 9 | 51 | 354 | 362 | 644 | 7.19e-13 | 70.1 |
| Msa1260200 | MtrunA17_Chr4g0074331 | 25.538 | 325 | 203 | 15 | 43 | 360 | 62 | 354 | 8.10e-15 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260200 | AT1G74210.1 | 72.610 | 387 | 105 | 1 | 4 | 389 | 3 | 389 | 0.0 | 593 |
| Msa1260200 | AT5G08030.1 | 76.989 | 352 | 81 | 0 | 16 | 367 | 16 | 367 | 0.0 | 582 |
| Msa1260200 | AT5G08030.2 | 76.989 | 352 | 81 | 0 | 16 | 367 | 31 | 382 | 0.0 | 582 |
| Msa1260200 | AT4G26690.1 | 22.785 | 316 | 211 | 8 | 47 | 354 | 363 | 653 | 9.77e-18 | 85.9 |
| Msa1260200 | AT4G26690.1 | 24.471 | 331 | 192 | 10 | 44 | 354 | 44 | 336 | 5.18e-17 | 83.6 |
| Msa1260200 | AT1G66970.1 | 23.734 | 316 | 209 | 9 | 47 | 354 | 369 | 660 | 4.74e-17 | 83.6 |
| Msa1260200 | AT1G66970.1 | 27.273 | 330 | 198 | 14 | 37 | 354 | 43 | 342 | 6.00e-16 | 80.1 |
| Msa1260200 | AT1G66970.2 | 23.175 | 315 | 212 | 8 | 47 | 354 | 391 | 682 | 5.36e-17 | 83.6 |
| Msa1260200 | AT1G66970.2 | 27.245 | 323 | 193 | 14 | 44 | 354 | 72 | 364 | 1.17e-15 | 79.3 |
| Msa1260200 | AT5G55480.1 | 20.958 | 334 | 231 | 8 | 47 | 371 | 368 | 677 | 5.96e-17 | 83.2 |
| Msa1260200 | AT1G66970.3 | 23.175 | 315 | 212 | 8 | 47 | 354 | 175 | 466 | 6.50e-17 | 82.8 |
| Msa1260200 | AT3G20520.1 | 20.988 | 324 | 232 | 7 | 47 | 363 | 340 | 646 | 2.35e-15 | 78.2 |
| Msa1260200 | AT1G66980.3 | 24.051 | 316 | 207 | 9 | 47 | 354 | 372 | 662 | 5.35e-14 | 74.3 |
| Msa1260200 | AT1G66980.1 | 24.051 | 316 | 207 | 9 | 47 | 354 | 372 | 662 | 5.81e-14 | 74.3 |
| Msa1260200 | AT1G66980.2 | 24.051 | 316 | 207 | 9 | 47 | 354 | 401 | 691 | 6.34e-14 | 74.3 |
| Msa1260200 | AT1G66980.4 | 24.051 | 316 | 207 | 9 | 47 | 354 | 355 | 645 | 6.67e-14 | 73.9 |
Find 101 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGTTGTTTGCCGCGGAAAT+AGG | 0.120882 | 8_2:+62057613 | None:intergenic |
| CCCCTATGTGCAACGTTATA+TGG | 0.136452 | 8_2:+62056672 | None:intergenic |
| TGCAGTTGATTTCACATTAA+AGG | 0.140506 | 8_2:-62055588 | Msa1260200:intron |
| TGAATCAGAGGTTCAGCTTT+AGG | 0.246627 | 8_2:-62055547 | Msa1260200:CDS |
| GTTGAAACACTTCGGAAATA+TGG | 0.255128 | 8_2:-62054479 | Msa1260200:CDS |
| TGATTACTGGATCAACAAAA+TGG | 0.274727 | 8_2:-62053511 | Msa1260200:CDS |
| AAGCAATATGTTGTAGGAAT+TGG | 0.302113 | 8_2:-62054077 | Msa1260200:CDS |
| GTATCGTAGGAACGTGAAAA+TGG | 0.309244 | 8_2:+62057577 | None:intergenic |
| TATCTCAATGTCTTCGTTAT+CGG | 0.318763 | 8_2:-62057496 | Msa1260200:exon |
| ACATATAAGAACACCATCTT+TGG | 0.329743 | 8_2:+62056193 | None:intergenic |
| GAATCAGAGGTTCAGCTTTA+GGG | 0.347631 | 8_2:-62055546 | Msa1260200:CDS |
| AGAAACTCGCGAGGCATATC+TGG | 0.353981 | 8_2:-62056628 | Msa1260200:intron |
| TATGCCTCGCGAGTTTCTTC+AGG | 0.363128 | 8_2:+62056633 | None:intergenic |
| TCTTGTCATCTTGACGGTTA+GGG | 0.364460 | 8_2:+62053427 | None:intergenic |
| ATCTCAATGTCTTCGTTATC+GGG | 0.369178 | 8_2:-62057495 | Msa1260200:intron |
| GTCTTGTCATCTTGACGGTT+AGG | 0.371938 | 8_2:+62053426 | None:intergenic |
| TTCTCATTTCTGTACGTGTA+TGG | 0.378212 | 8_2:+62053579 | None:intergenic |
| CTTACAAGGAGTATGATTAC+TGG | 0.378731 | 8_2:-62053524 | Msa1260200:CDS |
| ATGATTATGTGCAGTCATAT+TGG | 0.381861 | 8_2:-62054133 | Msa1260200:intron |
| AGGCCTTTGTATCCACTTCC+TGG | 0.386639 | 8_2:-62056738 | Msa1260200:CDS |
| CGTTGTTTGCCGCGGAAATA+GGG | 0.389693 | 8_2:+62057614 | None:intergenic |
| CCCATATAACGTTGCACATA+GGG | 0.394571 | 8_2:-62056673 | Msa1260200:CDS |
| CTCCTTCGGATCTTGTTGCC+AGG | 0.400869 | 8_2:-62054007 | Msa1260200:CDS |
| GATATATACACAAGTGAAGT+TGG | 0.401531 | 8_2:+62054392 | None:intergenic |
| TGATTATGTGCAGTCATATT+GGG | 0.403241 | 8_2:-62054132 | Msa1260200:intron |
| ATCAACAAAATGGGAATTGA+TGG | 0.404261 | 8_2:-62053501 | Msa1260200:CDS |
| GATATAAATAACAGGTGAAA+TGG | 0.409069 | 8_2:-62054532 | Msa1260200:intron |
| TTGGATGCACCCAGAGTTGT+TGG | 0.424638 | 8_2:-62055053 | Msa1260200:CDS |
| CCCTATGTGCAACGTTATAT+GGG | 0.427804 | 8_2:+62056673 | None:intergenic |
| TACATAAAGCAATATGTTGT+AGG | 0.433660 | 8_2:-62054083 | Msa1260200:CDS |
| TTTAGGGATCAACAGTTTAA+CGG | 0.437378 | 8_2:-62055530 | Msa1260200:intron |
| TTCCTACTTACGTTCTAAAT+CGG | 0.439458 | 8_2:+62057668 | None:intergenic |
| GTTGCACATAGGGGCTCAAA+TGG | 0.451850 | 8_2:-62056663 | Msa1260200:CDS |
| ATGCAGTCTTGTCATCTTGA+CGG | 0.452860 | 8_2:+62053421 | None:intergenic |
| TACCAGTGAAATCTGTAAAC+AGG | 0.454717 | 8_2:+62053478 | None:intergenic |
| AGGATATATTCCAACAACTC+TGG | 0.460634 | 8_2:+62055043 | None:intergenic |
| CAGTAATCATACTCCTTGTA+AGG | 0.464985 | 8_2:+62053525 | None:intergenic |
| CTTCCATGGTCACCTTTGCC+AGG | 0.470270 | 8_2:+62056720 | None:intergenic |
| GAAGAGGCTGCTTACTTCCA+TGG | 0.474342 | 8_2:+62056706 | None:intergenic |
| CATATTGCTTTATGTAGTCT+AGG | 0.476260 | 8_2:+62054090 | None:intergenic |
| GTCGGACGGCAAACGATTTG+AGG | 0.480583 | 8_2:-62054510 | Msa1260200:CDS |
| AGAGTTCATTACCATAGCAT+TGG | 0.485013 | 8_2:-62055072 | Msa1260200:CDS |
| TGGTCACCTTTGCCAGGAAG+TGG | 0.486182 | 8_2:+62056726 | None:intergenic |
| GATTACTGGATCAACAAAAT+GGG | 0.486674 | 8_2:-62053510 | Msa1260200:CDS |
| GTTGAAGGGGTCATTACCAC+TGG | 0.486833 | 8_2:-62056092 | Msa1260200:CDS |
| ACATGCTGATTGATAAGTAC+TGG | 0.490440 | 8_2:+62055008 | None:intergenic |
| AAAAGAACATATGAAGTTGA+AGG | 0.491237 | 8_2:-62056107 | Msa1260200:CDS |
| TTCAACACAAGACACTAATC+AGG | 0.497899 | 8_2:-62054321 | Msa1260200:intron |
| ACGGCAAACGATTTGAGGAC+AGG | 0.499996 | 8_2:-62054505 | Msa1260200:CDS |
| AAGTAGGAACAAAGAAATGC+GGG | 0.504234 | 8_2:-62057654 | Msa1260200:five_prime_UTR |
| TTGAGTCTTCTTCGTATCGT+AGG | 0.509596 | 8_2:+62057564 | None:intergenic |
| GATATATTATCTTCCAAAGA+TGG | 0.509816 | 8_2:-62056206 | Msa1260200:CDS |
| TGTGTATATATCAAATCAAA+CGG | 0.510034 | 8_2:-62054381 | Msa1260200:CDS |
| CAACTATGTGATGACTCCTT+CGG | 0.513161 | 8_2:-62054021 | Msa1260200:CDS |
| GGATATATTCCAACAACTCT+GGG | 0.526903 | 8_2:+62055044 | None:intergenic |
| ACTTCGGAAATATGGATACA+AGG | 0.529530 | 8_2:-62054471 | Msa1260200:CDS |
| TCCTTCGGATCTTGTTGCCA+GGG | 0.530863 | 8_2:-62054006 | Msa1260200:CDS |
| ATGCGGGGAATATTCGTTTG+TGG | 0.532195 | 8_2:-62057638 | Msa1260200:five_prime_UTR |
| TGTAGGAATTGGACCTTGGA+AGG | 0.532490 | 8_2:-62054066 | Msa1260200:CDS |
| ATGTGTTGTGTTCGTCACTC+AGG | 0.533545 | 8_2:+62057535 | None:intergenic |
| AAAGAACATATGAAGTTGAA+GGG | 0.534240 | 8_2:-62056106 | Msa1260200:CDS |
| CTTTAGTCAAGATCCTTACA+AGG | 0.536799 | 8_2:-62053538 | Msa1260200:CDS |
| CTTGTCATCTTGACGGTTAG+GGG | 0.536985 | 8_2:+62053428 | None:intergenic |
| GCCCATATAACGTTGCACAT+AGG | 0.541427 | 8_2:-62056674 | Msa1260200:CDS |
| TTGTATCCACTTCCTGGCAA+AGG | 0.547465 | 8_2:-62056732 | Msa1260200:CDS |
| GTTCATACCTGTCAAAACAT+TGG | 0.548979 | 8_2:-62054448 | Msa1260200:CDS |
| GGCACATGCTCATAATCTGC+AGG | 0.551055 | 8_2:-62053985 | Msa1260200:intron |
| CTCAAATTATCATGACAACC+TGG | 0.553835 | 8_2:+62057712 | None:intergenic |
| TTGCAGAGAGCTATTGAGGA+AGG | 0.565109 | 8_2:-62056248 | Msa1260200:intron |
| TAAATAACAGGTGAAATGGT+CGG | 0.572543 | 8_2:-62054528 | Msa1260200:intron |
| TCTGGGTGCATCCAATGCTA+TGG | 0.574074 | 8_2:+62055061 | None:intergenic |
| TGAAGCTAGGATTACTGAGT+GGG | 0.576746 | 8_2:-62053122 | Msa1260200:three_prime_UTR |
| ACAGGTTTGTTGAAACACTT+CGG | 0.580004 | 8_2:-62054487 | Msa1260200:CDS |
| CAGATTATGAGCATGTGCCC+TGG | 0.581110 | 8_2:+62053989 | None:intergenic |
| CTTCCTGGCAAAGGTGACCA+TGG | 0.581158 | 8_2:-62056723 | Msa1260200:CDS |
| ATCACATAGTTGTTAACCAC+AGG | 0.582933 | 8_2:+62054032 | None:intergenic |
| GGCCTGTTTACAGATTTCAC+TGG | 0.586096 | 8_2:-62053480 | Msa1260200:CDS |
| TTGAAGCTAGGATTACTGAG+TGG | 0.587365 | 8_2:-62053123 | Msa1260200:three_prime_UTR |
| ATTAAAGTCGTTGTTTGCCG+CGG | 0.592518 | 8_2:+62057606 | None:intergenic |
| GCAAATGACTGTATAAATGC+AGG | 0.602676 | 8_2:+62054416 | None:intergenic |
| AACCGATTTAGAACGTAAGT+AGG | 0.609010 | 8_2:-62057670 | Msa1260200:five_prime_UTR |
| ATGTTGTAGGAATTGGACCT+TGG | 0.610872 | 8_2:-62054070 | Msa1260200:CDS |
| TATGGGCGAAAAGTTTGAAG+AGG | 0.612743 | 8_2:+62056690 | None:intergenic |
| AGTCGCTGAGGGTGAATCAG+AGG | 0.615291 | 8_2:-62055559 | Msa1260200:CDS |
| AAAGGAATTAAAGTCGCTGA+GGG | 0.619575 | 8_2:-62055570 | Msa1260200:CDS |
| ATAAGTTTAAAGTTGTATTG+CGG | 0.619609 | 8_2:-62053174 | Msa1260200:three_prime_UTR |
| TAAAGGAATTAAAGTCGCTG+AGG | 0.621868 | 8_2:-62055571 | Msa1260200:CDS |
| CCATATAACGTTGCACATAG+GGG | 0.625643 | 8_2:-62056672 | Msa1260200:CDS |
| TTTCTATTGCTCGTGATTGG+GGG | 0.629901 | 8_2:-62056768 | Msa1260200:CDS |
| CTTCGGAAATATGGATACAA+GGG | 0.630595 | 8_2:-62054470 | Msa1260200:CDS |
| AAGAACATATGAAGTTGAAG+GGG | 0.634583 | 8_2:-62056105 | Msa1260200:CDS |
| GAAGGATACTATAGTACCTG+TGG | 0.635202 | 8_2:-62054048 | Msa1260200:CDS |
| GGTACTATAGTATCCTTCCA+AGG | 0.636568 | 8_2:+62054053 | None:intergenic |
| TAACAGGTGAAATGGTCGGA+CGG | 0.639574 | 8_2:-62054524 | Msa1260200:intron |
| GCCCTGGCAACAAGATCCGA+AGG | 0.642209 | 8_2:+62054005 | None:intergenic |
| TTGCCAGGAAGTGGATACAA+AGG | 0.653361 | 8_2:+62056735 | None:intergenic |
| GTTTGTGGACCCTATTTCCG+CGG | 0.656130 | 8_2:-62057623 | Msa1260200:five_prime_UTR |
| TAAGTAGGAACAAAGAAATG+CGG | 0.661353 | 8_2:-62057655 | Msa1260200:five_prime_UTR |
| ACTTCCTGAAGAAACTCGCG+AGG | 0.669064 | 8_2:-62056637 | Msa1260200:CDS |
| TATTATCAAGAGTAACGTCG+TGG | 0.673707 | 8_2:+62056168 | None:intergenic |
| AGTAGGAACAAAGAAATGCG+GGG | 0.710560 | 8_2:-62057653 | Msa1260200:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATATATATAGATAGA+TGG | - | chr8_2:62053544-62053563 | Msa1260200:CDS | 10.0% |
| !!! | AAAAAACAAATATCATTTTT+AGG | + | chr8_2:62054577-62054596 | None:intergenic | 10.0% |
| !! | ATTAAATTGATATAAATAAC+AGG | - | chr8_2:62056303-62056322 | Msa1260200:intron | 10.0% |
| !!! | ATAAAAAAACACAATTTTAG+CGG | + | chr8_2:62053525-62053544 | None:intergenic | 15.0% |
| !! | CATAAAACTATTATTTACTT+TGG | - | chr8_2:62055672-62055691 | Msa1260200:intron | 15.0% |
| !!! | TGCATTTTGAAATGAAAATT+GGG | + | chr8_2:62053589-62053608 | None:intergenic | 20.0% |
| !!! | ATGCATTTTGAAATGAAAAT+TGG | + | chr8_2:62053590-62053609 | None:intergenic | 20.0% |
| !! | TTAGTTAGTTAGTATGAAAA+TGG | - | chr8_2:62053937-62053956 | Msa1260200:intron | 20.0% |
| !! | TAGTTAGTTAGTATGAAAAT+GGG | - | chr8_2:62053938-62053957 | Msa1260200:intron | 20.0% |
| !! | ATTTCCTTCGTAAAATATAT+TGG | - | chr8_2:62054820-62054839 | Msa1260200:intron | 20.0% |
| !! | TTTCCTTCGTAAAATATATT+GGG | - | chr8_2:62054821-62054840 | Msa1260200:intron | 20.0% |
| !! | AATGGTAACTCAATAAATTA+AGG | + | chr8_2:62055041-62055060 | None:intergenic | 20.0% |
| !!! | TAGACGTATTTCTTAATTTT+AGG | - | chr8_2:62055071-62055090 | Msa1260200:CDS | 20.0% |
| !!! | AGACGTATTTCTTAATTTTA+GGG | - | chr8_2:62055072-62055091 | Msa1260200:CDS | 20.0% |
| !!! | ATTAATTGTGAACTATTTTG+TGG | - | chr8_2:62055412-62055431 | Msa1260200:intron | 20.0% |
| !!! | TGAACCATTTTAAAATCTAA+TGG | + | chr8_2:62055595-62055614 | None:intergenic | 20.0% |
| !!! | CATGATATGTTTTATAATCA+AGG | - | chr8_2:62056055-62056074 | Msa1260200:intron | 20.0% |
| !! | TTAGGATAATGATTATTGTA+CGG | - | chr8_2:62056104-62056123 | Msa1260200:CDS | 20.0% |
| !!! | GTGAGATTATGTTATATTTT+TGG | - | chr8_2:62056127-62056146 | Msa1260200:CDS | 20.0% |
| !! | TGTGTATATATCAAATCAAA+CGG | - | chr8_2:62056462-62056481 | Msa1260200:intron | 20.0% |
| !!! | TCATCGATTAAAAAAATCTT+AGG | + | chr8_2:62056493-62056512 | None:intergenic | 20.0% |
| !! | CAACATTGTATAACATTAAA+AGG | + | chr8_2:62056636-62056655 | None:intergenic | 20.0% |
| !!! | ATAAGTTTAAAGTTGTATTG+CGG | - | chr8_2:62057669-62057688 | Msa1260200:five_prime_UTR | 20.0% |
| !! | TTTATTAGCCTCTGTATAAA+TGG | - | chr8_2:62053404-62053423 | Msa1260200:CDS | 25.0% |
| ! | AATTGAAAATTGAAGCAAGT+TGG | + | chr8_2:62053447-62053466 | None:intergenic | 25.0% |
| !! | CTTGCTTCAATTTTCAATTT+TGG | - | chr8_2:62053448-62053467 | Msa1260200:CDS | 25.0% |
| !!! | ATATAGATAGATGGATTAAG+TGG | - | chr8_2:62053553-62053572 | Msa1260200:CDS | 25.0% |
| ! | ATGATTAAGTTATGCAAGAA+TGG | - | chr8_2:62053661-62053680 | Msa1260200:intron | 25.0% |
| ! | ATGAAAAGAGAAACATTTGA+AGG | + | chr8_2:62053714-62053733 | None:intergenic | 25.0% |
| !!! | TTCTGCTTTTATCACTAATT+TGG | - | chr8_2:62053783-62053802 | Msa1260200:intron | 25.0% |
| !!! | TCTGCTTTTATCACTAATTT+GGG | - | chr8_2:62053784-62053803 | Msa1260200:intron | 25.0% |
| ! | GTGAAAAATAAATGAAGACA+AGG | + | chr8_2:62053840-62053859 | None:intergenic | 25.0% |
| ! | TGACAAATCATAAATGTAAC+AGG | - | chr8_2:62054036-62054055 | Msa1260200:CDS | 25.0% |
| ! | ATTATGCACAAACTAGTATT+TGG | - | chr8_2:62054496-62054515 | Msa1260200:CDS | 25.0% |
| ! | GATATATTATCTTCCAAAGA+TGG | - | chr8_2:62054637-62054656 | Msa1260200:intron | 25.0% |
| ! | AAAAGAACATATGAAGTTGA+AGG | - | chr8_2:62054736-62054755 | Msa1260200:intron | 25.0% |
| ! | AAAGAACATATGAAGTTGAA+GGG | - | chr8_2:62054737-62054756 | Msa1260200:intron | 25.0% |
| !!! | AAGACGTTTTATTTCTCAAT+AGG | - | chr8_2:62055099-62055118 | Msa1260200:CDS | 25.0% |
| ! | AAAGAATGGAATATTGTTTC+TGG | + | chr8_2:62055169-62055188 | None:intergenic | 25.0% |
| ! | CATAACAATTCAAAGAAATG+AGG | + | chr8_2:62055391-62055410 | None:intergenic | 25.0% |
| !!! | TGACAGATTTTAATAAGAAC+TGG | - | chr8_2:62055480-62055499 | Msa1260200:intron | 25.0% |
| ! | TTGAGAATAAGATGAAGTAA+AGG | - | chr8_2:62055511-62055530 | Msa1260200:intron | 25.0% |
| !!! | AGCTCCATTAGATTTTAAAA+TGG | - | chr8_2:62055588-62055607 | Msa1260200:intron | 25.0% |
| ! | ATTCATACAATAAGATTGGA+GGG | + | chr8_2:62055942-62055961 | None:intergenic | 25.0% |
| ! | TCACATTCATACAATAAGAT+TGG | + | chr8_2:62055946-62055965 | None:intergenic | 25.0% |
| ! | ATCTTATTGTATGAATGTGA+TGG | - | chr8_2:62055946-62055965 | Msa1260200:intron | 25.0% |
| ! | TAGGATAATGATTATTGTAC+GGG | - | chr8_2:62056105-62056124 | Msa1260200:CDS | 25.0% |
| ! | GATATAAATAACAGGTGAAA+TGG | - | chr8_2:62056311-62056330 | Msa1260200:intron | 25.0% |
| ! | ATCAATTTGTAGAAGATCAA+GGG | + | chr8_2:62056575-62056594 | None:intergenic | 25.0% |
| !! | CATTACAGTACTATTTTGTT+AGG | + | chr8_2:62056693-62056712 | None:intergenic | 25.0% |
| ! | TACATAAAGCAATATGTTGT+AGG | - | chr8_2:62056760-62056779 | Msa1260200:CDS | 25.0% |
| ! | TAATCATATGAAGAGAAACA+AGG | + | chr8_2:62056902-62056921 | None:intergenic | 25.0% |
| ! | CTAGATAACAAATTAAAGGT+GGG | + | chr8_2:62057012-62057031 | None:intergenic | 25.0% |
| ! | TCTAGATAACAAATTAAAGG+TGG | + | chr8_2:62057013-62057032 | None:intergenic | 25.0% |
| ! | CACTCTAGATAACAAATTAA+AGG | + | chr8_2:62057016-62057035 | None:intergenic | 25.0% |
| !! | GTGTCATAAATGAATGTTTT+TGG | - | chr8_2:62057195-62057214 | Msa1260200:intron | 25.0% |
| ! | TAAAGTTGAAATGCAAAAAC+TGG | + | chr8_2:62057290-62057309 | None:intergenic | 25.0% |
| ! | CTCAAAAAATCATTCATAAG+CGG | + | chr8_2:62057481-62057500 | None:intergenic | 25.0% |
| !!! | GCTATTTTGTCTAAATACTA+AGG | - | chr8_2:62057602-62057621 | Msa1260200:five_prime_UTR | 25.0% |
| ! | ACATGAAAAATATTGAAGCT+AGG | - | chr8_2:62057708-62057727 | Msa1260200:five_prime_UTR | 25.0% |
| ! | TTCCTACTTACGTTCTAAAT+CGG | + | chr8_2:62053178-62053197 | None:intergenic | 30.0% |
| TAAGTAGGAACAAAGAAATG+CGG | - | chr8_2:62053188-62053207 | Msa1260200:three_prime_UTR | 30.0% | |
| TATCTCAATGTCTTCGTTAT+CGG | - | chr8_2:62053347-62053366 | Msa1260200:three_prime_UTR | 30.0% | |
| ACAATGATCCATTTATACAG+AGG | + | chr8_2:62053415-62053434 | None:intergenic | 30.0% | |
| !! | TGACTGTTGATTCAAATTGT+AGG | - | chr8_2:62053481-62053500 | Msa1260200:CDS | 30.0% |
| ACACATATCTAATCCAGTTA+GGG | + | chr8_2:62053741-62053760 | None:intergenic | 30.0% | |
| TAGTTAGTATGAAAATGGGT+TGG | - | chr8_2:62053942-62053961 | Msa1260200:intron | 30.0% | |
| ! | AGTTAGTATGAAAATGGGTT+GGG | - | chr8_2:62053943-62053962 | Msa1260200:intron | 30.0% |
| ACGAGCAATAGAAAAACAAA+AGG | + | chr8_2:62054069-62054088 | None:intergenic | 30.0% | |
| ! | TTTTTCTATTGCTCGTGATT+GGG | - | chr8_2:62054073-62054092 | Msa1260200:CDS | 30.0% |
| CAGATGTAAAGTAATGAGAA+AGG | + | chr8_2:62054275-62054294 | None:intergenic | 30.0% | |
| !! | TGTGGTGTCAATAGTTTTTA+AGG | - | chr8_2:62054328-62054347 | Msa1260200:CDS | 30.0% |
| ATATTGAGCTAATCAGTGTA+TGG | + | chr8_2:62054389-62054408 | None:intergenic | 30.0% | |
| !! | ATTGACGTCATTTTCAACTT+TGG | - | chr8_2:62054537-62054556 | Msa1260200:intron | 30.0% |
| ACATATAAGAACACCATCTT+TGG | + | chr8_2:62054653-62054672 | None:intergenic | 30.0% | |
| AAGAACATATGAAGTTGAAG+GGG | - | chr8_2:62054738-62054757 | Msa1260200:intron | 30.0% | |
| !!! | ATTACCACTGGATTTTTTGT+CGG | - | chr8_2:62054763-62054782 | Msa1260200:intron | 30.0% |
| TACGTCTATACAAAGCAAAA+TGG | + | chr8_2:62055059-62055078 | None:intergenic | 30.0% | |
| GAAAAAACTGGATGAAAGAA+TGG | + | chr8_2:62055183-62055202 | None:intergenic | 30.0% | |
| CTTGAAAGTGATGAAAAAAC+TGG | + | chr8_2:62055195-62055214 | None:intergenic | 30.0% | |
| ! | TGCAGTTGATTTCACATTAA+AGG | - | chr8_2:62055255-62055274 | Msa1260200:intron | 30.0% |
| TTTAGGGATCAACAGTTTAA+CGG | - | chr8_2:62055313-62055332 | Msa1260200:intron | 30.0% | |
| AAAGCTACTATGAGTAGAAA+GGG | + | chr8_2:62055344-62055363 | None:intergenic | 30.0% | |
| AAAAGCTACTATGAGTAGAA+AGG | + | chr8_2:62055345-62055364 | None:intergenic | 30.0% | |
| ! | ATGAGTTTAGAAGTACAAAG+TGG | + | chr8_2:62055438-62055457 | None:intergenic | 30.0% |
| AGAATAAGATGAAGTAAAGG+TGG | - | chr8_2:62055514-62055533 | Msa1260200:intron | 30.0% | |
| !! | GGTTCAATGATCATTTTTAC+TGG | - | chr8_2:62055609-62055628 | Msa1260200:intron | 30.0% |
| AAAAACAAGTAATCAGCAGA+CGG | + | chr8_2:62055637-62055656 | None:intergenic | 30.0% | |
| TAAGTCTATTGCCTTATCTT+TGG | - | chr8_2:62055711-62055730 | Msa1260200:intron | 30.0% | |
| TGAAAGAGATTCCAAAGATA+AGG | + | chr8_2:62055725-62055744 | None:intergenic | 30.0% | |
| !! | TTATCTTTGGAATCTCTTTC+AGG | - | chr8_2:62055724-62055743 | Msa1260200:intron | 30.0% |
| !!! | AGTACTGGATTTTTTATCTC+AGG | + | chr8_2:62055823-62055842 | None:intergenic | 30.0% |
| CATTCATACAATAAGATTGG+AGG | + | chr8_2:62055943-62055962 | None:intergenic | 30.0% | |
| TATTGTATGAATGTGATGGT+TGG | - | chr8_2:62055950-62055969 | Msa1260200:intron | 30.0% | |
| !! | TCCATGAGTTGATATTGTAA+CGG | - | chr8_2:62055994-62056013 | Msa1260200:intron | 30.0% |
| CATATGCACAATAAAAATGC+TGG | + | chr8_2:62056035-62056054 | None:intergenic | 30.0% | |
| ! | TGTGACTTTAGCTTAAGTTT+AGG | - | chr8_2:62056086-62056105 | Msa1260200:CDS | 30.0% |
| ! | TTTGGAATAAACATTCCAAC+AGG | + | chr8_2:62056197-62056216 | None:intergenic | 30.0% |
| TGTTGGAATGTTTATTCCAA+AGG | - | chr8_2:62056196-62056215 | Msa1260200:CDS | 30.0% | |
| ! | AGCATGAAATTTAAGACCTT+TGG | + | chr8_2:62056215-62056234 | None:intergenic | 30.0% |
| TAAATAACAGGTGAAATGGT+CGG | - | chr8_2:62056315-62056334 | Msa1260200:intron | 30.0% | |
| GATATATACACAAGTGAAGT+TGG | + | chr8_2:62056454-62056473 | None:intergenic | 30.0% | |
| ! | GTGAGTAATGTATTTTACCT+TGG | - | chr8_2:62056544-62056563 | Msa1260200:intron | 30.0% |
| CATCAATTTGTAGAAGATCA+AGG | + | chr8_2:62056576-62056595 | None:intergenic | 30.0% | |
| ! | AGTACTATTTTGTTAGGCTT+TGG | + | chr8_2:62056687-62056706 | None:intergenic | 30.0% |
| ATGATTATGTGCAGTCATAT+TGG | - | chr8_2:62056710-62056729 | Msa1260200:CDS | 30.0% | |
| TGATTATGTGCAGTCATATT+GGG | - | chr8_2:62056711-62056730 | Msa1260200:CDS | 30.0% | |
| CATATTGCTTTATGTAGTCT+AGG | + | chr8_2:62056756-62056775 | None:intergenic | 30.0% | |
| AAGCAATATGTTGTAGGAAT+TGG | - | chr8_2:62056766-62056785 | Msa1260200:CDS | 30.0% | |
| TGATTACTGGATCAACAAAA+TGG | - | chr8_2:62057332-62057351 | Msa1260200:intron | 30.0% | |
| GATTACTGGATCAACAAAAT+GGG | - | chr8_2:62057333-62057352 | Msa1260200:intron | 30.0% | |
| ATCAACAAAATGGGAATTGA+TGG | - | chr8_2:62057342-62057361 | Msa1260200:intron | 30.0% | |
| ! | TGGTAGTCTTCATAATTTTC+AGG | - | chr8_2:62057383-62057402 | Msa1260200:intron | 30.0% |
| !! | GTCTTCATAATTTTCAGGAA+TGG | - | chr8_2:62057388-62057407 | Msa1260200:intron | 30.0% |
| !!! | CGCTTATGAATGATTTTTTG+AGG | - | chr8_2:62057479-62057498 | Msa1260200:intron | 30.0% |
| ! | GTAAAAAAAAAGCATGTGCT+TGG | - | chr8_2:62057515-62057534 | Msa1260200:five_prime_UTR | 30.0% |
| CATGACAACCTGGAAAAAAA+AGG | + | chr8_2:62053124-62053143 | None:intergenic | 35.0% | |
| CTCAAATTATCATGACAACC+TGG | + | chr8_2:62053134-62053153 | None:intergenic | 35.0% | |
| ! | AACCGATTTAGAACGTAAGT+AGG | - | chr8_2:62053173-62053192 | Msa1260200:three_prime_UTR | 35.0% |
| AAGTAGGAACAAAGAAATGC+GGG | - | chr8_2:62053189-62053208 | Msa1260200:three_prime_UTR | 35.0% | |
| ATCTCAATGTCTTCGTTATC+GGG | - | chr8_2:62053348-62053367 | Msa1260200:three_prime_UTR | 35.0% | |
| !! | GAAAATTGAAGCAAGTTGGT+TGG | + | chr8_2:62053443-62053462 | None:intergenic | 35.0% |
| AATGAAAATTGGGTTTCCCT+TGG | + | chr8_2:62053579-62053598 | None:intergenic | 35.0% | |
| ! | AGAAACATTTGAAGGCATGA+AGG | + | chr8_2:62053706-62053725 | None:intergenic | 35.0% |
| ! | TCTTTTCATGAATCCCTAAC+TGG | - | chr8_2:62053725-62053744 | Msa1260200:intron | 35.0% |
| GACACATATCTAATCCAGTT+AGG | + | chr8_2:62053742-62053761 | None:intergenic | 35.0% | |
| ! | TGGATTAGATATGTGTCCAT+TGG | - | chr8_2:62053745-62053764 | Msa1260200:intron | 35.0% |
| AGCATGAGATGATATACCAA+TGG | + | chr8_2:62053764-62053783 | None:intergenic | 35.0% | |
| CAGTTAGAGTTACTGATGAT+CGG | + | chr8_2:62053898-62053917 | None:intergenic | 35.0% | |
| ! | TAACTCTAACTGGCTTATCA+GGG | - | chr8_2:62053906-62053925 | Msa1260200:intron | 35.0% |
| ! | ATGATTTGTCACACCAAGTT+GGG | + | chr8_2:62054027-62054046 | None:intergenic | 35.0% |
| ! | TATGATTTGTCACACCAAGT+TGG | + | chr8_2:62054028-62054047 | None:intergenic | 35.0% |
| ! | GTTTTTCTATTGCTCGTGAT+TGG | - | chr8_2:62054072-62054091 | Msa1260200:CDS | 35.0% |
| ! | TTTTCTATTGCTCGTGATTG+GGG | - | chr8_2:62054074-62054093 | Msa1260200:CDS | 35.0% |
| ! | ATTTTGCCAGAAGAGTTATG+TGG | + | chr8_2:62054246-62054265 | None:intergenic | 35.0% |
| !!! | AATAGTTTTTAAGGTGCCCA+TGG | - | chr8_2:62054337-62054356 | Msa1260200:CDS | 35.0% |
| GTTTGTGCATAATTGTAGCA+TGG | + | chr8_2:62054489-62054508 | None:intergenic | 35.0% | |
| !!! | TTTTTTGCAGAGAGCTATTG+AGG | - | chr8_2:62054591-62054610 | Msa1260200:intron | 35.0% |
| TATTATCAAGAGTAACGTCG+TGG | + | chr8_2:62054678-62054697 | None:intergenic | 35.0% | |
| ! | CCTCCCAATATATTTTACGA+AGG | + | chr8_2:62054827-62054846 | None:intergenic | 35.0% |
| CCTTCGTAAAATATATTGGG+AGG | - | chr8_2:62054824-62054843 | Msa1260200:intron | 35.0% | |
| !! | ATTTCTAGTGACACCTATTC+TGG | - | chr8_2:62054906-62054925 | Msa1260200:intron | 35.0% |
| ! | ACTTTTATTGAACGTCCTCT+TGG | - | chr8_2:62054956-62054975 | Msa1260200:intron | 35.0% |
| ! | CTTTTATTGAACGTCCTCTT+GGG | - | chr8_2:62054957-62054976 | Msa1260200:intron | 35.0% |
| !! | AATTTGTTAAGATGCCCAAG+AGG | + | chr8_2:62054974-62054993 | None:intergenic | 35.0% |
| CTTGGGCATCTTAACAAATT+TGG | - | chr8_2:62054974-62054993 | Msa1260200:intron | 35.0% | |
| TAAAGGAATTAAAGTCGCTG+AGG | - | chr8_2:62055272-62055291 | Msa1260200:intron | 35.0% | |
| AAAGGAATTAAAGTCGCTGA+GGG | - | chr8_2:62055273-62055292 | Msa1260200:intron | 35.0% | |
| AGGTGGAAATATCCTTTACA+AGG | - | chr8_2:62055531-62055550 | Msa1260200:CDS | 35.0% | |
| !! | AAAGGAGAGTATCCTTGTAA+AGG | + | chr8_2:62055546-62055565 | None:intergenic | 35.0% |
| CGCATGTATAAGAGAAGAAA+AGG | + | chr8_2:62055564-62055583 | None:intergenic | 35.0% | |
| TAGACTTAGCCATTTCAATG+CGG | + | chr8_2:62055699-62055718 | None:intergenic | 35.0% | |
| AGAGTTCATTACCATAGCAT+TGG | - | chr8_2:62055771-62055790 | Msa1260200:intron | 35.0% | |
| GGATATATTCCAACAACTCT+GGG | + | chr8_2:62055802-62055821 | None:intergenic | 35.0% | |
| AGGATATATTCCAACAACTC+TGG | + | chr8_2:62055803-62055822 | None:intergenic | 35.0% | |
| ! | ACATGCTGATTGATAAGTAC+TGG | + | chr8_2:62055838-62055857 | None:intergenic | 35.0% |
| ATCCAATAAACTTCTGTCTG+TGG | - | chr8_2:62055875-62055894 | Msa1260200:intron | 35.0% | |
| TCCGTTACAATATCAACTCA+TGG | + | chr8_2:62055998-62056017 | None:intergenic | 35.0% | |
| TTTGGAAGTTTCGAAAGATC+CGG | - | chr8_2:62056145-62056164 | Msa1260200:CDS | 35.0% | |
| AATCCTCTCTTAGTACAATC+CGG | + | chr8_2:62056167-62056186 | None:intergenic | 35.0% | |
| ! | AGAGGATTTTTATCACCTGT+TGG | - | chr8_2:62056179-62056198 | Msa1260200:CDS | 35.0% |
| ! | CTTTTAGTCCATTTCCTTAG+AGG | - | chr8_2:62056263-62056282 | Msa1260200:intron | 35.0% |
| !! | ACAGGTTTGTTGAAACACTT+CGG | - | chr8_2:62056356-62056375 | Msa1260200:intron | 35.0% |
| GTTGAAACACTTCGGAAATA+TGG | - | chr8_2:62056364-62056383 | Msa1260200:intron | 35.0% | |
| ACTTCGGAAATATGGATACA+AGG | - | chr8_2:62056372-62056391 | Msa1260200:intron | 35.0% | |
| CTTCGGAAATATGGATACAA+GGG | - | chr8_2:62056373-62056392 | Msa1260200:intron | 35.0% | |
| GTTCATACCTGTCAAAACAT+TGG | - | chr8_2:62056395-62056414 | Msa1260200:intron | 35.0% | |
| !!! | GTTTCAACCAATGTTTTGAC+AGG | + | chr8_2:62056405-62056424 | None:intergenic | 35.0% |
| GCAAATGACTGTATAAATGC+AGG | + | chr8_2:62056430-62056449 | None:intergenic | 35.0% | |
| TTCAACACAAGACACTAATC+AGG | - | chr8_2:62056522-62056541 | Msa1260200:intron | 35.0% | |
| ATCACATAGTTGTTAACCAC+AGG | + | chr8_2:62056814-62056833 | None:intergenic | 35.0% | |
| !! | CCACACAATCTTTTGAAGAT+TGG | + | chr8_2:62056935-62056954 | None:intergenic | 35.0% |
| CCAATCTTCAAAAGATTGTG+TGG | - | chr8_2:62056932-62056951 | Msa1260200:intron | 35.0% | |
| AGTGCAGTGATATGTCATAA+CGG | - | chr8_2:62057032-62057051 | Msa1260200:intron | 35.0% | |
| TTGTGCTAAATGGCATATCA+CGG | + | chr8_2:62057081-62057100 | None:intergenic | 35.0% | |
| !! | ATGATTGTTGATGATGATGC+AGG | - | chr8_2:62057236-62057255 | Msa1260200:intron | 35.0% |
| TTCTCATTTCTGTACGTGTA+TGG | + | chr8_2:62057267-62057286 | None:intergenic | 35.0% | |
| CTTTAGTCAAGATCCTTACA+AGG | - | chr8_2:62057305-62057324 | Msa1260200:intron | 35.0% | |
| CAGTAATCATACTCCTTGTA+AGG | + | chr8_2:62057321-62057340 | None:intergenic | 35.0% | |
| ! | CTTACAAGGAGTATGATTAC+TGG | - | chr8_2:62057319-62057338 | Msa1260200:intron | 35.0% |
| TACCAGTGAAATCTGTAAAC+AGG | + | chr8_2:62057368-62057387 | None:intergenic | 35.0% | |
| !!! | TGATTTTTTGAGGTGTCAGA+TGG | - | chr8_2:62057489-62057508 | Msa1260200:intron | 35.0% |
| AGTAGGAACAAAGAAATGCG+GGG | - | chr8_2:62053190-62053209 | Msa1260200:three_prime_UTR | 40.0% | |
| ATTAAAGTCGTTGTTTGCCG+CGG | + | chr8_2:62053240-62053259 | None:intergenic | 40.0% | |
| GTATCGTAGGAACGTGAAAA+TGG | + | chr8_2:62053269-62053288 | None:intergenic | 40.0% | |
| TTGAGTCTTCTTCGTATCGT+AGG | + | chr8_2:62053282-62053301 | None:intergenic | 40.0% | |
| !! | ATTGAAGCAAGTTGGTTGGT+TGG | + | chr8_2:62053439-62053458 | None:intergenic | 40.0% |
| !! | ATAGATGGATTAAGTGGCCA+AGG | - | chr8_2:62053559-62053578 | Msa1260200:CDS | 40.0% |
| !! | TAGATGGATTAAGTGGCCAA+GGG | - | chr8_2:62053560-62053579 | Msa1260200:CDS | 40.0% |
| CGATCATCAGTAACTCTAAC+TGG | - | chr8_2:62053896-62053915 | Msa1260200:intron | 40.0% | |
| ! | GTAACTCTAACTGGCTTATC+AGG | - | chr8_2:62053905-62053924 | Msa1260200:intron | 40.0% |
| !! | AGTATGAAAATGGGTTGGGT+TGG | - | chr8_2:62053947-62053966 | Msa1260200:intron | 40.0% |
| CAGCTAAATATCTCCCAACT+TGG | - | chr8_2:62054011-62054030 | Msa1260200:CDS | 40.0% | |
| TTTCTATTGCTCGTGATTGG+GGG | - | chr8_2:62054075-62054094 | Msa1260200:CDS | 40.0% | |
| TATGGGCGAAAAGTTTGAAG+AGG | + | chr8_2:62054156-62054175 | None:intergenic | 40.0% | |
| CCCTATGTGCAACGTTATAT+GGG | + | chr8_2:62054173-62054192 | None:intergenic | 40.0% | |
| CCCATATAACGTTGCACATA+GGG | - | chr8_2:62054170-62054189 | Msa1260200:intron | 40.0% | |
| CCATATAACGTTGCACATAG+GGG | - | chr8_2:62054171-62054190 | Msa1260200:intron | 40.0% | |
| GTGAATCCACATAACTCTTC+TGG | - | chr8_2:62054237-62054256 | Msa1260200:intron | 40.0% | |
| GCTAATCAGTGTATGGTCAA+TGG | + | chr8_2:62054382-62054401 | None:intergenic | 40.0% | |
| !! | AGTACCGACAAAAAATCCAG+TGG | + | chr8_2:62054770-62054789 | None:intergenic | 40.0% |
| ! | ATGAGCTGACTTTCCAGAAT+AGG | + | chr8_2:62054922-62054941 | None:intergenic | 40.0% |
| TGAATCAGAGGTTCAGCTTT+AGG | - | chr8_2:62055296-62055315 | Msa1260200:intron | 40.0% | |
| GAATCAGAGGTTCAGCTTTA+GGG | - | chr8_2:62055297-62055316 | Msa1260200:intron | 40.0% | |
| AGACTTAGCCATTTCAATGC+GGG | + | chr8_2:62055698-62055717 | None:intergenic | 40.0% | |
| TGCCACAGACAGAAGTTTAT+TGG | + | chr8_2:62055880-62055899 | None:intergenic | 40.0% | |
| ATGTTGTAGGAATTGGACCT+TGG | - | chr8_2:62056773-62056792 | Msa1260200:CDS | 40.0% | |
| GGTACTATAGTATCCTTCCA+AGG | + | chr8_2:62056793-62056812 | None:intergenic | 40.0% | |
| GAAGGATACTATAGTACCTG+TGG | - | chr8_2:62056795-62056814 | Msa1260200:intron | 40.0% | |
| CAACTATGTGATGACTCCTT+CGG | - | chr8_2:62056822-62056841 | Msa1260200:intron | 40.0% | |
| TGGCAACACTTTGTGCTAAA+TGG | + | chr8_2:62057091-62057110 | None:intergenic | 40.0% | |
| !! | CACAAAGTGTTGCCAAATAG+TGG | - | chr8_2:62057096-62057115 | Msa1260200:intron | 40.0% |
| ! | GAGCAAACCAGTATTTTCTG+CGG | - | chr8_2:62057148-62057167 | Msa1260200:intron | 40.0% |
| TATTGGACCGCAGAAAATAC+TGG | + | chr8_2:62057158-62057177 | None:intergenic | 40.0% | |
| TCGAGCAGTGTTGTCAATAT+TGG | + | chr8_2:62057175-62057194 | None:intergenic | 40.0% | |
| TCTTGTCATCTTGACGGTTA+GGG | + | chr8_2:62057419-62057438 | None:intergenic | 40.0% | |
| ! | ATGCAGTCTTGTCATCTTGA+CGG | + | chr8_2:62057425-62057444 | None:intergenic | 40.0% |
| TTGAAGCTAGGATTACTGAG+TGG | - | chr8_2:62057720-62057739 | Msa1260200:five_prime_UTR | 40.0% | |
| TGAAGCTAGGATTACTGAGT+GGG | - | chr8_2:62057721-62057740 | Msa1260200:five_prime_UTR | 40.0% | |
| ATGCGGGGAATATTCGTTTG+TGG | - | chr8_2:62053205-62053224 | Msa1260200:three_prime_UTR | 45.0% | |
| ATGTGTTGTGTTCGTCACTC+AGG | + | chr8_2:62053311-62053330 | None:intergenic | 45.0% | |
| TTGCCAGGAAGTGGATACAA+AGG | + | chr8_2:62054111-62054130 | None:intergenic | 45.0% | |
| TTGTATCCACTTCCTGGCAA+AGG | - | chr8_2:62054111-62054130 | Msa1260200:CDS | 45.0% | |
| GCCCATATAACGTTGCACAT+AGG | - | chr8_2:62054169-62054188 | Msa1260200:intron | 45.0% | |
| CCCCTATGTGCAACGTTATA+TGG | + | chr8_2:62054174-62054193 | None:intergenic | 45.0% | |
| TATGCAGCACAGTGAACCAT+GGG | + | chr8_2:62054356-62054375 | None:intergenic | 45.0% | |
| ATATGCAGCACAGTGAACCA+TGG | + | chr8_2:62054357-62054376 | None:intergenic | 45.0% | |
| TTGCAGAGAGCTATTGAGGA+AGG | - | chr8_2:62054595-62054614 | Msa1260200:intron | 45.0% | |
| TACTTTGGCCCGCATTGAAA+TGG | - | chr8_2:62055687-62055706 | Msa1260200:intron | 45.0% | |
| ! | ATGAATGTGATGGTTGGTGC+TGG | - | chr8_2:62055956-62055975 | Msa1260200:intron | 45.0% |
| GATCCGGATTGTACTAAGAG+AGG | - | chr8_2:62056161-62056180 | Msa1260200:CDS | 45.0% | |
| AAGAAAGCAGACAGCCTCTA+AGG | + | chr8_2:62056280-62056299 | None:intergenic | 45.0% | |
| TAACAGGTGAAATGGTCGGA+CGG | - | chr8_2:62056319-62056338 | Msa1260200:intron | 45.0% | |
| GAAGATCAAGGGATAAGCCA+AGG | + | chr8_2:62056564-62056583 | None:intergenic | 45.0% | |
| TGTAGGAATTGGACCTTGGA+AGG | - | chr8_2:62056777-62056796 | Msa1260200:CDS | 45.0% | |
| GGCCTGTTTACAGATTTCAC+TGG | - | chr8_2:62057363-62057382 | Msa1260200:intron | 45.0% | |
| CTTGTCATCTTGACGGTTAG+GGG | + | chr8_2:62057418-62057437 | None:intergenic | 45.0% | |
| GTCTTGTCATCTTGACGGTT+AGG | + | chr8_2:62057420-62057439 | None:intergenic | 45.0% | |
| !!! | ACATTTTTAAAAATATAATT+TGG | + | chr8_2:62054311-62054330 | None:intergenic | 5.0% |
| !!! | AAATTATATTTTTAAAAATG+TGG | - | chr8_2:62054310-62054329 | Msa1260200:intron | 5.0% |
| GTTTGTGGACCCTATTTCCG+CGG | - | chr8_2:62053220-62053239 | Msa1260200:three_prime_UTR | 50.0% | |
| CGTTGTTTGCCGCGGAAATA+GGG | + | chr8_2:62053232-62053251 | None:intergenic | 50.0% | |
| TCGTTGTTTGCCGCGGAAAT+AGG | + | chr8_2:62053233-62053252 | None:intergenic | 50.0% | |
| AGGCCTTTGTATCCACTTCC+TGG | - | chr8_2:62054105-62054124 | Msa1260200:CDS | 50.0% | |
| GAAGAGGCTGCTTACTTCCA+TGG | + | chr8_2:62054140-62054159 | None:intergenic | 50.0% | |
| GTTGCACATAGGGGCTCAAA+TGG | - | chr8_2:62054180-62054199 | Msa1260200:intron | 50.0% | |
| ACTTCCTGAAGAAACTCGCG+AGG | - | chr8_2:62054206-62054225 | Msa1260200:intron | 50.0% | |
| TATGCCTCGCGAGTTTCTTC+AGG | + | chr8_2:62054213-62054232 | None:intergenic | 50.0% | |
| AGAAACTCGCGAGGCATATC+TGG | - | chr8_2:62054215-62054234 | Msa1260200:intron | 50.0% | |
| GTTGAAGGGGTCATTACCAC+TGG | - | chr8_2:62054751-62054770 | Msa1260200:intron | 50.0% | |
| TCTGGGTGCATCCAATGCTA+TGG | + | chr8_2:62055785-62055804 | None:intergenic | 50.0% | |
| TTGGATGCACCCAGAGTTGT+TGG | - | chr8_2:62055790-62055809 | Msa1260200:intron | 50.0% | |
| ! | GCAGACAGCCTCTAAGGAAA+TGG | + | chr8_2:62056274-62056293 | None:intergenic | 50.0% |
| ACGGCAAACGATTTGAGGAC+AGG | - | chr8_2:62056338-62056357 | Msa1260200:intron | 50.0% | |
| TCCTTCGGATCTTGTTGCCA+GGG | - | chr8_2:62056837-62056856 | Msa1260200:intron | 50.0% | |
| CAGATTATGAGCATGTGCCC+TGG | + | chr8_2:62056857-62056876 | None:intergenic | 50.0% | |
| GGCACATGCTCATAATCTGC+AGG | - | chr8_2:62056858-62056877 | Msa1260200:intron | 50.0% | |
| ! | AGTGCTGTTGCGCCACTATT+TGG | + | chr8_2:62057111-62057130 | None:intergenic | 50.0% |
| ATTGCTCGTGATTGGGGGCA+CGG | - | chr8_2:62054080-62054099 | Msa1260200:CDS | 55.0% | |
| TGGTCACCTTTGCCAGGAAG+TGG | + | chr8_2:62054120-62054139 | None:intergenic | 55.0% | |
| CTTCCTGGCAAAGGTGACCA+TGG | - | chr8_2:62054120-62054139 | Msa1260200:CDS | 55.0% | |
| CTTCCATGGTCACCTTTGCC+AGG | + | chr8_2:62054126-62054145 | None:intergenic | 55.0% | |
| AGTCGCTGAGGGTGAATCAG+AGG | - | chr8_2:62055284-62055303 | Msa1260200:intron | 55.0% | |
| GTCGGACGGCAAACGATTTG+AGG | - | chr8_2:62056333-62056352 | Msa1260200:intron | 55.0% | |
| CTCCTTCGGATCTTGTTGCC+AGG | - | chr8_2:62056836-62056855 | Msa1260200:intron | 55.0% | |
| GCCCTGGCAACAAGATCCGA+AGG | + | chr8_2:62056841-62056860 | None:intergenic | 60.0% | |
| GGCGCAACAGCACTGTAGCA+TGG | - | chr8_2:62057117-62057136 | Msa1260200:intron | 60.0% | |
| ! | TCGTGATTGGGGGCACGGCT+AGG | - | chr8_2:62054085-62054104 | Msa1260200:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 62053116 | 62057749 | 62053116 | ID=Msa1260200;Name=Msa1260200 |
| chr8_2 | mRNA | 62053116 | 62057749 | 62053116 | ID=Msa1260200-mRNA-1;Parent=Msa1260200;Name=Msa1260200-mRNA-1;_AED=0.13;_eAED=0.13;_QI=238|1|1|1|0.85|0.87|8|258|390 |
| chr8_2 | exon | 62053116 | 62053607 | 62053116 | ID=Msa1260200-mRNA-1:exon:19647;Parent=Msa1260200-mRNA-1 |
| chr8_2 | exon | 62053986 | 62054141 | 62053986 | ID=Msa1260200-mRNA-1:exon:19646;Parent=Msa1260200-mRNA-1 |
| chr8_2 | exon | 62054322 | 62054540 | 62054322 | ID=Msa1260200-mRNA-1:exon:19645;Parent=Msa1260200-mRNA-1 |
| chr8_2 | exon | 62055010 | 62055119 | 62055010 | ID=Msa1260200-mRNA-1:exon:19644;Parent=Msa1260200-mRNA-1 |
| chr8_2 | exon | 62055531 | 62055605 | 62055531 | ID=Msa1260200-mRNA-1:exon:19643;Parent=Msa1260200-mRNA-1 |
| chr8_2 | exon | 62056081 | 62056264 | 62056081 | ID=Msa1260200-mRNA-1:exon:19642;Parent=Msa1260200-mRNA-1 |
| chr8_2 | exon | 62056629 | 62056807 | 62056629 | ID=Msa1260200-mRNA-1:exon:19641;Parent=Msa1260200-mRNA-1 |
| chr8_2 | exon | 62057496 | 62057749 | 62057496 | ID=Msa1260200-mRNA-1:exon:19640;Parent=Msa1260200-mRNA-1 |
| chr8_2 | five_prime_UTR | 62057512 | 62057749 | 62057512 | ID=Msa1260200-mRNA-1:five_prime_utr;Parent=Msa1260200-mRNA-1 |
| chr8_2 | CDS | 62057496 | 62057511 | 62057496 | ID=Msa1260200-mRNA-1:cds;Parent=Msa1260200-mRNA-1 |
| chr8_2 | CDS | 62056629 | 62056807 | 62056629 | ID=Msa1260200-mRNA-1:cds;Parent=Msa1260200-mRNA-1 |
| chr8_2 | CDS | 62056081 | 62056264 | 62056081 | ID=Msa1260200-mRNA-1:cds;Parent=Msa1260200-mRNA-1 |
| chr8_2 | CDS | 62055531 | 62055605 | 62055531 | ID=Msa1260200-mRNA-1:cds;Parent=Msa1260200-mRNA-1 |
| chr8_2 | CDS | 62055010 | 62055119 | 62055010 | ID=Msa1260200-mRNA-1:cds;Parent=Msa1260200-mRNA-1 |
| chr8_2 | CDS | 62054322 | 62054540 | 62054322 | ID=Msa1260200-mRNA-1:cds;Parent=Msa1260200-mRNA-1 |
| chr8_2 | CDS | 62053986 | 62054141 | 62053986 | ID=Msa1260200-mRNA-1:cds;Parent=Msa1260200-mRNA-1 |
| chr8_2 | CDS | 62053374 | 62053607 | 62053374 | ID=Msa1260200-mRNA-1:cds;Parent=Msa1260200-mRNA-1 |
| chr8_2 | three_prime_UTR | 62053116 | 62053373 | 62053116 | ID=Msa1260200-mRNA-1:three_prime_utr;Parent=Msa1260200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
