Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213020 | sp|Q9C907|GDPD5_ARATH | 72.610 | 387 | 105 | 1 | 4 | 389 | 3 | 389 | 0.0 | 593 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213020 | A0A072URQ0 | 97.429 | 389 | 10 | 0 | 2 | 390 | 3 | 391 | 0.0 | 788 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0069260 | Msa1213020 | 0.802557 | 5.300878e-49 | -8.615850e-47 |
| Msa0623170 | Msa1213020 | 0.822235 | 2.641000e-53 | -8.615850e-47 |
| Msa0708050 | Msa1213020 | -0.808007 | 3.826196e-50 | -8.615850e-47 |
| Msa0731470 | Msa1213020 | 0.812966 | 3.248990e-51 | -8.615850e-47 |
| Msa0743680 | Msa1213020 | 0.824809 | 6.599244e-54 | -8.615850e-47 |
| Msa0784620 | Msa1213020 | 0.847565 | 1.067070e-59 | -8.615850e-47 |
| Msa0809740 | Msa1213020 | 0.820356 | 7.163079e-53 | -8.615850e-47 |
| Msa0824730 | Msa1213020 | 0.822583 | 2.192147e-53 | -8.615850e-47 |
| Msa0125370 | Msa1213020 | -0.806046 | 9.947574e-50 | -8.615850e-47 |
| Msa0130140 | Msa1213020 | -0.817803 | 2.728095e-52 | -8.615850e-47 |
| Msa0175850 | Msa1213020 | -0.827492 | 1.518322e-54 | -8.615850e-47 |
| Msa0196020 | Msa1213020 | -0.838735 | 2.409686e-57 | -8.615850e-47 |
| Msa0223100 | Msa1213020 | 0.800042 | 1.735073e-48 | -8.615850e-47 |
| Msa0223290 | Msa1213020 | 0.808633 | 2.813882e-50 | -8.615850e-47 |
| Msa0377530 | Msa1213020 | 0.848859 | 4.685566e-60 | -8.615850e-47 |
| Msa0388030 | Msa1213020 | -0.821337 | 4.259685e-53 | -8.615850e-47 |
| Msa0422500 | Msa1213020 | 0.800955 | 1.130226e-48 | -8.615850e-47 |
| Msa0426810 | Msa1213020 | 0.834111 | 3.620994e-56 | -8.615850e-47 |
| Msa0450350 | Msa1213020 | 0.800866 | 1.178774e-48 | -8.615850e-47 |
| Msa0467920 | Msa1213020 | -0.833174 | 6.206704e-56 | -8.615850e-47 |
| Msa1037020 | Msa1213020 | 0.802569 | 5.272427e-49 | -8.615850e-47 |
| Msa1066870 | Msa1213020 | 0.803707 | 3.065238e-49 | -8.615850e-47 |
| Msa0275400 | Msa1213020 | -0.823330 | 1.468236e-53 | -8.615850e-47 |
| Msa0302650 | Msa1213020 | 0.818295 | 2.111478e-52 | -8.615850e-47 |
| Msa0307110 | Msa1213020 | 0.801893 | 7.261440e-49 | -8.615850e-47 |
| Msa0314120 | Msa1213020 | 0.843876 | 1.070052e-58 | -8.615850e-47 |
| Msa1164530 | Msa1213020 | 0.810181 | 1.309646e-50 | -8.615850e-47 |
| Msa1212800 | Msa1213020 | 0.964937 | 5.844957e-124 | -8.615850e-47 |
| Msa1213020 | Msa1236070 | -0.801198 | 1.008016e-48 | -8.615850e-47 |
| Msa1213020 | Msa1260200 | 0.958549 | 1.790924e-116 | -8.615850e-47 |
| Msa1213020 | Msa1269580 | -0.806569 | 7.719368e-50 | -8.615850e-47 |
| Msa1213020 | Msa1300090 | 0.969650 | 1.957334e-130 | -8.615850e-47 |
| Msa1213020 | Msa1360890 | -0.808340 | 3.250390e-50 | -8.615850e-47 |
| Msa1213020 | Msa1399500 | 0.824610 | 7.352218e-54 | -8.615850e-47 |
| Msa1213020 | Msa1409750 | 0.817881 | 2.620176e-52 | -8.615850e-47 |
| Msa1213020 | Msa1442220 | -0.831158 | 1.955540e-55 | -8.615850e-47 |
| Msa1213020 | Msa1447160 | -0.813355 | 2.669658e-51 | -8.615850e-47 |
| Msa0511250 | Msa1213020 | 0.806481 | 8.057167e-50 | -8.615850e-47 |
| Msa0517490 | Msa1213020 | 0.851558 | 8.210003e-61 | -8.615850e-47 |
| Msa0531990 | Msa1213020 | -0.802823 | 4.672089e-49 | -8.615850e-47 |
| Msa0575990 | Msa1213020 | -0.801209 | 1.003243e-48 | -8.615850e-47 |
| Msa0576100 | Msa1213020 | -0.806137 | 9.519922e-50 | -8.615850e-47 |
| Msa0849330 | Msa1213020 | 0.807071 | 6.046751e-50 | -8.615850e-47 |
| Msa0863800 | Msa1213020 | 0.816476 | 5.423235e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213020 | MtrunA17_Chr4g0061511 | 97.429 | 389 | 10 | 0 | 2 | 390 | 3 | 391 | 0.0 | 788 |
| Msa1213020 | MtrunA17_Chr5g0445151 | 28.173 | 323 | 192 | 15 | 44 | 354 | 37 | 331 | 3.06e-18 | 86.7 |
| Msa1213020 | MtrunA17_Chr5g0445151 | 23.620 | 326 | 214 | 10 | 47 | 363 | 358 | 657 | 2.21e-17 | 84.3 |
| Msa1213020 | MtrunA17_Chr2g0304791 | 26.220 | 328 | 196 | 12 | 47 | 361 | 277 | 571 | 1.29e-17 | 84.7 |
| Msa1213020 | MtrunA17_Chr2g0304791 | 27.660 | 282 | 176 | 12 | 82 | 360 | 13 | 269 | 1.08e-12 | 69.7 |
| Msa1213020 | MtrunA17_Chr3g0100611 | 26.235 | 324 | 212 | 12 | 37 | 354 | 29 | 331 | 3.24e-16 | 80.5 |
| Msa1213020 | MtrunA17_Chr3g0100611 | 22.186 | 311 | 207 | 9 | 51 | 354 | 362 | 644 | 7.19e-13 | 70.1 |
| Msa1213020 | MtrunA17_Chr4g0074331 | 25.538 | 325 | 203 | 15 | 43 | 360 | 62 | 354 | 8.10e-15 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213020 | AT1G74210.1 | 72.610 | 387 | 105 | 1 | 4 | 389 | 3 | 389 | 0.0 | 593 |
| Msa1213020 | AT5G08030.1 | 76.989 | 352 | 81 | 0 | 16 | 367 | 16 | 367 | 0.0 | 582 |
| Msa1213020 | AT5G08030.2 | 76.989 | 352 | 81 | 0 | 16 | 367 | 31 | 382 | 0.0 | 582 |
| Msa1213020 | AT4G26690.1 | 22.785 | 316 | 211 | 8 | 47 | 354 | 363 | 653 | 9.77e-18 | 85.9 |
| Msa1213020 | AT4G26690.1 | 24.471 | 331 | 192 | 10 | 44 | 354 | 44 | 336 | 5.18e-17 | 83.6 |
| Msa1213020 | AT1G66970.1 | 23.734 | 316 | 209 | 9 | 47 | 354 | 369 | 660 | 4.74e-17 | 83.6 |
| Msa1213020 | AT1G66970.1 | 27.273 | 330 | 198 | 14 | 37 | 354 | 43 | 342 | 6.00e-16 | 80.1 |
| Msa1213020 | AT1G66970.2 | 23.175 | 315 | 212 | 8 | 47 | 354 | 391 | 682 | 5.36e-17 | 83.6 |
| Msa1213020 | AT1G66970.2 | 27.245 | 323 | 193 | 14 | 44 | 354 | 72 | 364 | 1.17e-15 | 79.3 |
| Msa1213020 | AT5G55480.1 | 20.958 | 334 | 231 | 8 | 47 | 371 | 368 | 677 | 5.96e-17 | 83.2 |
| Msa1213020 | AT1G66970.3 | 23.175 | 315 | 212 | 8 | 47 | 354 | 175 | 466 | 6.50e-17 | 82.8 |
| Msa1213020 | AT3G20520.1 | 20.988 | 324 | 232 | 7 | 47 | 363 | 340 | 646 | 2.35e-15 | 78.2 |
| Msa1213020 | AT1G66980.3 | 24.051 | 316 | 207 | 9 | 47 | 354 | 372 | 662 | 5.35e-14 | 74.3 |
| Msa1213020 | AT1G66980.1 | 24.051 | 316 | 207 | 9 | 47 | 354 | 372 | 662 | 5.81e-14 | 74.3 |
| Msa1213020 | AT1G66980.2 | 24.051 | 316 | 207 | 9 | 47 | 354 | 401 | 691 | 6.34e-14 | 74.3 |
| Msa1213020 | AT1G66980.4 | 24.051 | 316 | 207 | 9 | 47 | 354 | 355 | 645 | 6.67e-14 | 73.9 |
Find 101 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCCTATGTGCAACGTTATA+TGG | 0.136452 | 8_1:+73043964 | None:intergenic |
| TGCAGTTGATTTCACATTAA+AGG | 0.140506 | 8_1:-73042880 | Msa1213020:intron |
| TCGTTGCTTGCCGCGGAAAT+AGG | 0.171136 | 8_1:+73044926 | None:intergenic |
| TGAATCAGAGGTTCAGCTTT+AGG | 0.246627 | 8_1:-73042839 | Msa1213020:CDS |
| GTTGAAACACTTCGGAAATA+TGG | 0.255128 | 8_1:-73041771 | Msa1213020:CDS |
| TGATTACTGGATCAACAAAA+TGG | 0.274727 | 8_1:-73040803 | Msa1213020:CDS |
| AAGCAATATGTTGTAGGAAT+TGG | 0.302113 | 8_1:-73041369 | Msa1213020:CDS |
| GTATCGTAGGAACGTGAAAA+TGG | 0.309244 | 8_1:+73044890 | None:intergenic |
| TATCTCAATGTCTTCGTTAT+CGG | 0.318763 | 8_1:-73044809 | Msa1213020:exon |
| ACATATAAGAACACCATCTT+TGG | 0.329743 | 8_1:+73043485 | None:intergenic |
| GAATCAGAGGTTCAGCTTTA+GGG | 0.347631 | 8_1:-73042838 | Msa1213020:CDS |
| AGAAACTCGCGAGGCATATC+TGG | 0.353981 | 8_1:-73043920 | Msa1213020:intron |
| TATGCCTCGCGAGTTTCTTC+AGG | 0.363128 | 8_1:+73043925 | None:intergenic |
| TCTTGTCATCTTGACGGTTA+GGG | 0.364460 | 8_1:+73040719 | None:intergenic |
| ATCTCAATGTCTTCGTTATC+GGG | 0.369178 | 8_1:-73044808 | Msa1213020:intron |
| GTCTTGTCATCTTGACGGTT+AGG | 0.371938 | 8_1:+73040718 | None:intergenic |
| TTCTCATTTCTGTACGTGTA+TGG | 0.378212 | 8_1:+73040871 | None:intergenic |
| CTTACAAGGAGTATGATTAC+TGG | 0.378731 | 8_1:-73040816 | Msa1213020:CDS |
| ATGATTATGTGCAGTCATAT+TGG | 0.381861 | 8_1:-73041425 | Msa1213020:intron |
| AGGCCTTTGTATCCACTTCC+TGG | 0.386639 | 8_1:-73044030 | Msa1213020:CDS |
| CCCATATAACGTTGCACATA+GGG | 0.394571 | 8_1:-73043965 | Msa1213020:CDS |
| CTCCTTCGGATCTTGTTGCC+AGG | 0.400869 | 8_1:-73041299 | Msa1213020:CDS |
| GATATATACACAAGTGAAGT+TGG | 0.401531 | 8_1:+73041684 | None:intergenic |
| TGATTATGTGCAGTCATATT+GGG | 0.403241 | 8_1:-73041424 | Msa1213020:intron |
| ATCAACAAAATGGGAATTGA+TGG | 0.404261 | 8_1:-73040793 | Msa1213020:CDS |
| CGTTGCTTGCCGCGGAAATA+GGG | 0.406739 | 8_1:+73044927 | None:intergenic |
| GATATAAATAACAGGTGAAA+TGG | 0.409069 | 8_1:-73041824 | Msa1213020:intron |
| TTGGATGCACCCAGAGTTGT+TGG | 0.424638 | 8_1:-73042345 | Msa1213020:CDS |
| CCCTATGTGCAACGTTATAT+GGG | 0.427804 | 8_1:+73043965 | None:intergenic |
| TACATAAAGCAATATGTTGT+AGG | 0.433660 | 8_1:-73041375 | Msa1213020:CDS |
| TTTAGGGATCAACAGTTTAA+CGG | 0.437378 | 8_1:-73042822 | Msa1213020:intron |
| TTCCTACTTACGTTCTAAAT+CGG | 0.439458 | 8_1:+73044981 | None:intergenic |
| GTTGCACATAGGGGCTCAAA+TGG | 0.451850 | 8_1:-73043955 | Msa1213020:CDS |
| TACCAGTGAAATCTGTAAAC+AGG | 0.454717 | 8_1:+73040770 | None:intergenic |
| AGGATATATTCCAACAACTC+TGG | 0.460634 | 8_1:+73042335 | None:intergenic |
| CAGTAATCATACTCCTTGTA+AGG | 0.464985 | 8_1:+73040817 | None:intergenic |
| CTTCCATGGTCACCTTTGCC+AGG | 0.470270 | 8_1:+73044012 | None:intergenic |
| GAAGAGGCTGCTTACTTCCA+TGG | 0.474342 | 8_1:+73043998 | None:intergenic |
| ATGCAGTCTTGTCATCTTGA+CGG | 0.475282 | 8_1:+73040713 | None:intergenic |
| CATATTGCTTTATGTAGTCT+AGG | 0.476260 | 8_1:+73041382 | None:intergenic |
| GTCGGACGGCAAACGATTTG+AGG | 0.480583 | 8_1:-73041802 | Msa1213020:CDS |
| AGAGTTCATTACCATAGCAT+TGG | 0.485013 | 8_1:-73042364 | Msa1213020:CDS |
| TGGTCACCTTTGCCAGGAAG+TGG | 0.486182 | 8_1:+73044018 | None:intergenic |
| GATTACTGGATCAACAAAAT+GGG | 0.486674 | 8_1:-73040802 | Msa1213020:CDS |
| GTTGAAGGGGTCATTACCAC+TGG | 0.486833 | 8_1:-73043384 | Msa1213020:CDS |
| ACATGCTGATTGATAAGTAC+TGG | 0.490440 | 8_1:+73042300 | None:intergenic |
| AAAAGAACATATGAAGTTGA+AGG | 0.491237 | 8_1:-73043399 | Msa1213020:CDS |
| TTCAACACAAGACACTAATC+AGG | 0.497899 | 8_1:-73041613 | Msa1213020:intron |
| ACGGCAAACGATTTGAGGAC+AGG | 0.499996 | 8_1:-73041797 | Msa1213020:CDS |
| AAGTAGGAACAAAGAAATGC+GGG | 0.504234 | 8_1:-73044967 | Msa1213020:five_prime_UTR |
| TTGAGTCTTCTTCGTATCGT+AGG | 0.509596 | 8_1:+73044877 | None:intergenic |
| GATATATTATCTTCCAAAGA+TGG | 0.509816 | 8_1:-73043498 | Msa1213020:CDS |
| TGTGTATATATCAAATCAAA+CGG | 0.510034 | 8_1:-73041673 | Msa1213020:CDS |
| CAACTATGTGATGACTCCTT+CGG | 0.513161 | 8_1:-73041313 | Msa1213020:CDS |
| GGATATATTCCAACAACTCT+GGG | 0.526903 | 8_1:+73042336 | None:intergenic |
| ACTTCGGAAATATGGATACA+AGG | 0.529530 | 8_1:-73041763 | Msa1213020:CDS |
| TCCTTCGGATCTTGTTGCCA+GGG | 0.530863 | 8_1:-73041298 | Msa1213020:CDS |
| TGTAGGAATTGGACCTTGGA+AGG | 0.532490 | 8_1:-73041358 | Msa1213020:CDS |
| ATGTGTTGTGTTCGTCACTC+AGG | 0.533545 | 8_1:+73044848 | None:intergenic |
| AAAGAACATATGAAGTTGAA+GGG | 0.534240 | 8_1:-73043398 | Msa1213020:CDS |
| CTTTAGTCAAGATCCTTACA+AGG | 0.536799 | 8_1:-73040830 | Msa1213020:CDS |
| CTTGTCATCTTGACGGTTAG+GGG | 0.536985 | 8_1:+73040720 | None:intergenic |
| GCCCATATAACGTTGCACAT+AGG | 0.541427 | 8_1:-73043966 | Msa1213020:CDS |
| ATTAAAGTCGTTGCTTGCCG+CGG | 0.544151 | 8_1:+73044919 | None:intergenic |
| TTGTATCCACTTCCTGGCAA+AGG | 0.547465 | 8_1:-73044024 | Msa1213020:CDS |
| GTTCATACCTGTCAAAACAT+TGG | 0.548979 | 8_1:-73041740 | Msa1213020:CDS |
| GGCACATGCTCATAATCTGC+AGG | 0.551055 | 8_1:-73041277 | Msa1213020:intron |
| CTCAAATTATCATGACAACC+TGG | 0.553835 | 8_1:+73045025 | None:intergenic |
| TTGCAGAGAGCTATTGAGGA+AGG | 0.565109 | 8_1:-73043540 | Msa1213020:intron |
| TAAATAACAGGTGAAATGGT+CGG | 0.572543 | 8_1:-73041820 | Msa1213020:intron |
| TCTGGGTGCATCCAATGCTA+TGG | 0.574074 | 8_1:+73042353 | None:intergenic |
| TGAAGCTAGGATTACTGAGT+GGG | 0.576746 | 8_1:-73040414 | Msa1213020:three_prime_UTR |
| ACAGGTTTGTTGAAACACTT+CGG | 0.580004 | 8_1:-73041779 | Msa1213020:CDS |
| CAGATTATGAGCATGTGCCC+TGG | 0.581110 | 8_1:+73041281 | None:intergenic |
| CTTCCTGGCAAAGGTGACCA+TGG | 0.581158 | 8_1:-73044015 | Msa1213020:CDS |
| ATCACATAGTTGTTAACCAC+AGG | 0.582933 | 8_1:+73041324 | None:intergenic |
| GGCCTGTTTACAGATTTCAC+TGG | 0.586096 | 8_1:-73040772 | Msa1213020:CDS |
| TTGAAGCTAGGATTACTGAG+TGG | 0.587365 | 8_1:-73040415 | Msa1213020:three_prime_UTR |
| GCAAATGACTGTATAAATGC+AGG | 0.602676 | 8_1:+73041708 | None:intergenic |
| AACCGATTTAGAACGTAAGT+AGG | 0.609010 | 8_1:-73044983 | Msa1213020:five_prime_UTR |
| ATGTTGTAGGAATTGGACCT+TGG | 0.610872 | 8_1:-73041362 | Msa1213020:CDS |
| TATGGGCGAAAAGTTTGAAG+AGG | 0.612743 | 8_1:+73043982 | None:intergenic |
| AGTCGCTGAGGGTGAATCAG+AGG | 0.615291 | 8_1:-73042851 | Msa1213020:CDS |
| AAAGGAATTAAAGTCGCTGA+GGG | 0.619575 | 8_1:-73042862 | Msa1213020:CDS |
| ATAAGTTTAAAGTTGTATTG+CGG | 0.619609 | 8_1:-73040466 | Msa1213020:three_prime_UTR |
| TAAAGGAATTAAAGTCGCTG+AGG | 0.621868 | 8_1:-73042863 | Msa1213020:CDS |
| CCATATAACGTTGCACATAG+GGG | 0.625643 | 8_1:-73043964 | Msa1213020:CDS |
| TTTCTATTGCTCGTGATTGG+GGG | 0.629901 | 8_1:-73044060 | Msa1213020:CDS |
| CTTCGGAAATATGGATACAA+GGG | 0.630595 | 8_1:-73041762 | Msa1213020:CDS |
| AAGAACATATGAAGTTGAAG+GGG | 0.634583 | 8_1:-73043397 | Msa1213020:CDS |
| GAAGGATACTATAGTACCTG+TGG | 0.635202 | 8_1:-73041340 | Msa1213020:CDS |
| GGTACTATAGTATCCTTCCA+AGG | 0.636568 | 8_1:+73041345 | None:intergenic |
| ATGCGGGGAATATTCGCTTG+TGG | 0.639254 | 8_1:-73044951 | Msa1213020:five_prime_UTR |
| TAACAGGTGAAATGGTCGGA+CGG | 0.639574 | 8_1:-73041816 | Msa1213020:intron |
| GCCCTGGCAACAAGATCCGA+AGG | 0.642209 | 8_1:+73041297 | None:intergenic |
| TTGCCAGGAAGTGGATACAA+AGG | 0.653361 | 8_1:+73044027 | None:intergenic |
| GCTTGTGGACCCTATTTCCG+CGG | 0.657383 | 8_1:-73044936 | Msa1213020:five_prime_UTR |
| TAAGTAGGAACAAAGAAATG+CGG | 0.661353 | 8_1:-73044968 | Msa1213020:five_prime_UTR |
| ACTTCCTGAAGAAACTCGCG+AGG | 0.669064 | 8_1:-73043929 | Msa1213020:CDS |
| TATTATCAAGAGTAACGTCG+TGG | 0.673707 | 8_1:+73043460 | None:intergenic |
| AGTAGGAACAAAGAAATGCG+GGG | 0.710560 | 8_1:-73044966 | Msa1213020:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAACAAATATCATTTTT+AGG | + | chr8_1:73041890-73041909 | None:intergenic | 10.0% |
| !! | ATTAAATTGATATAAATAAC+AGG | - | chr8_1:73043616-73043635 | Msa1213020:intron | 10.0% |
| !!! | ATAAAAAAACACAATTTTAG+CGG | + | chr8_1:73040817-73040836 | None:intergenic | 15.0% |
| !! | CATAAAACTATTATTTACTT+TGG | - | chr8_1:73042985-73043004 | Msa1213020:intron | 15.0% |
| !!! | TCATCGATTAAAAAAATTTT+AGG | + | chr8_1:73043806-73043825 | None:intergenic | 15.0% |
| !! | ATATAGATAGATAGATTAAG+TGG | - | chr8_1:73040851-73040870 | Msa1213020:CDS | 20.0% |
| !!! | TGCATTTTGAAATGAAAATT+GGG | + | chr8_1:73040887-73040906 | None:intergenic | 20.0% |
| !!! | ATGCATTTTGAAATGAAAAT+TGG | + | chr8_1:73040888-73040907 | None:intergenic | 20.0% |
| !! | TTAGTTAGTTAGTATGAAAA+TGG | - | chr8_1:73041250-73041269 | Msa1213020:intron | 20.0% |
| !! | TAGTTAGTTAGTATGAAAAT+GGG | - | chr8_1:73041251-73041270 | Msa1213020:intron | 20.0% |
| !! | ATTTCCTTCGTAAAATATAT+TGG | - | chr8_1:73042133-73042152 | Msa1213020:intron | 20.0% |
| !! | TTTCCTTCGTAAAATATATT+GGG | - | chr8_1:73042134-73042153 | Msa1213020:intron | 20.0% |
| !! | AATGGTAACTCAATAAATTA+AGG | + | chr8_1:73042354-73042373 | None:intergenic | 20.0% |
| !!! | TAGACGTATTTCTTAATTTT+AGG | - | chr8_1:73042384-73042403 | Msa1213020:CDS | 20.0% |
| !!! | AGACGTATTTCTTAATTTTA+GGG | - | chr8_1:73042385-73042404 | Msa1213020:CDS | 20.0% |
| !!! | ATTAATTGTGAACTATTTTG+TGG | - | chr8_1:73042725-73042744 | Msa1213020:intron | 20.0% |
| !!! | TGAACCATTTTAAAATCTAA+TGG | + | chr8_1:73042908-73042927 | None:intergenic | 20.0% |
| !!! | CATGATATGTTTTATAATCA+AGG | - | chr8_1:73043368-73043387 | Msa1213020:intron | 20.0% |
| !! | TTAGGATAATGATTATTGTA+CGG | - | chr8_1:73043417-73043436 | Msa1213020:CDS | 20.0% |
| !!! | GTGAGATTATGTTATATTTT+TGG | - | chr8_1:73043440-73043459 | Msa1213020:CDS | 20.0% |
| !! | TGTGTATATATCAAATCAAA+CGG | - | chr8_1:73043775-73043794 | Msa1213020:intron | 20.0% |
| !! | CAACATTGTATAACATTAAA+AGG | + | chr8_1:73043949-73043968 | None:intergenic | 20.0% |
| !!! | CATTACAGTATTATTTTGTT+AGG | + | chr8_1:73044006-73044025 | None:intergenic | 20.0% |
| !!! | ATAAGTTTAAAGTTGTATTG+CGG | - | chr8_1:73044982-73045001 | Msa1213020:five_prime_UTR | 20.0% |
| !! | TTTATTAGCCTCTGTATAAA+TGG | - | chr8_1:73040696-73040715 | Msa1213020:CDS | 25.0% |
| ! | AATTGAAAATTGAAGCAAGT+TGG | + | chr8_1:73040739-73040758 | None:intergenic | 25.0% |
| !! | CTTGCTTCAATTTTCAATTT+TGG | - | chr8_1:73040740-73040759 | Msa1213020:CDS | 25.0% |
| ! | ATGATTAAGTTATGCAAGAA+TGG | - | chr8_1:73040974-73040993 | Msa1213020:intron | 25.0% |
| ! | ATGAAAAGAGAAACATTTGA+AGG | + | chr8_1:73041027-73041046 | None:intergenic | 25.0% |
| ! | GTGAAAAATAAATGAAGACA+AGG | + | chr8_1:73041153-73041172 | None:intergenic | 25.0% |
| ! | TGACAAATCATAAATGTAAC+AGG | - | chr8_1:73041349-73041368 | Msa1213020:CDS | 25.0% |
| ! | ATTATGCACAAACTAGTATT+TGG | - | chr8_1:73041809-73041828 | Msa1213020:CDS | 25.0% |
| ! | GATATATTATCTTCCAAAGA+TGG | - | chr8_1:73041950-73041969 | Msa1213020:intron | 25.0% |
| ! | AAAAGAACATATGAAGTTGA+AGG | - | chr8_1:73042049-73042068 | Msa1213020:intron | 25.0% |
| ! | AAAGAACATATGAAGTTGAA+GGG | - | chr8_1:73042050-73042069 | Msa1213020:intron | 25.0% |
| !!! | AAGACGTTTTATTTCTCAAT+AGG | - | chr8_1:73042412-73042431 | Msa1213020:intron | 25.0% |
| ! | AAAGAATGGAATATTGTTTC+TGG | + | chr8_1:73042482-73042501 | None:intergenic | 25.0% |
| ! | CATAACAATTCAAAGAAATG+AGG | + | chr8_1:73042704-73042723 | None:intergenic | 25.0% |
| !!! | TGACAGATTTTAATAAGAAC+TGG | - | chr8_1:73042793-73042812 | Msa1213020:intron | 25.0% |
| ! | TTGAGAATAAGATGAAGTAA+AGG | - | chr8_1:73042824-73042843 | Msa1213020:CDS | 25.0% |
| !!! | AGCTCCATTAGATTTTAAAA+TGG | - | chr8_1:73042901-73042920 | Msa1213020:intron | 25.0% |
| ! | ATTCATACAATAAGATTGGA+GGG | + | chr8_1:73043255-73043274 | None:intergenic | 25.0% |
| ! | TCACATTCATACAATAAGAT+TGG | + | chr8_1:73043259-73043278 | None:intergenic | 25.0% |
| ! | ATCTTATTGTATGAATGTGA+TGG | - | chr8_1:73043259-73043278 | Msa1213020:intron | 25.0% |
| ! | TAGGATAATGATTATTGTAC+GGG | - | chr8_1:73043418-73043437 | Msa1213020:CDS | 25.0% |
| ! | GATATAAATAACAGGTGAAA+TGG | - | chr8_1:73043624-73043643 | Msa1213020:intron | 25.0% |
| ! | ATCAATTTGTAGAAGATCAA+GGG | + | chr8_1:73043888-73043907 | None:intergenic | 25.0% |
| !!! | AGTATTATTTTGTTAGGCTT+TGG | + | chr8_1:73044000-73044019 | None:intergenic | 25.0% |
| ! | TACATAAAGCAATATGTTGT+AGG | - | chr8_1:73044073-73044092 | Msa1213020:CDS | 25.0% |
| ! | TAATCATATGAAGAGAAACA+AGG | + | chr8_1:73044215-73044234 | None:intergenic | 25.0% |
| ! | CTAGATAACAAATTAAAGGT+GGG | + | chr8_1:73044325-73044344 | None:intergenic | 25.0% |
| ! | TCTAGATAACAAATTAAAGG+TGG | + | chr8_1:73044326-73044345 | None:intergenic | 25.0% |
| ! | CACTCTAGATAACAAATTAA+AGG | + | chr8_1:73044329-73044348 | None:intergenic | 25.0% |
| !! | GTGTCATAAATGAATGTTTT+TGG | - | chr8_1:73044508-73044527 | Msa1213020:intron | 25.0% |
| ! | TAAAGTTGAAATGCAAAAAC+TGG | + | chr8_1:73044603-73044622 | None:intergenic | 25.0% |
| !! | AGCAATTTTATGTAATAGCT+CGG | + | chr8_1:73044761-73044780 | None:intergenic | 25.0% |
| ! | CTCAAAAAATCATTCATAAG+CGG | + | chr8_1:73044794-73044813 | None:intergenic | 25.0% |
| !!! | GCTATTTTGTCTAAATACTA+AGG | - | chr8_1:73044915-73044934 | Msa1213020:five_prime_UTR | 25.0% |
| ! | ACATGAAAAATATTGAAGCT+AGG | - | chr8_1:73045021-73045040 | Msa1213020:five_prime_UTR | 25.0% |
| ! | TTCCTACTTACGTTCTAAAT+CGG | + | chr8_1:73040470-73040489 | None:intergenic | 30.0% |
| TAAGTAGGAACAAAGAAATG+CGG | - | chr8_1:73040480-73040499 | Msa1213020:three_prime_UTR | 30.0% | |
| TATCTCAATGTCTTCGTTAT+CGG | - | chr8_1:73040639-73040658 | Msa1213020:three_prime_UTR | 30.0% | |
| ACAATGATCCATTTATACAG+AGG | + | chr8_1:73040707-73040726 | None:intergenic | 30.0% | |
| !! | TGACTGTTGATTCAAATTGT+AGG | - | chr8_1:73040773-73040792 | Msa1213020:CDS | 30.0% |
| GCATTTCTACAATTGTGTAA+TGG | - | chr8_1:73040918-73040937 | Msa1213020:intron | 30.0% | |
| ACACATATCTAATCCAGTTA+GGG | + | chr8_1:73041054-73041073 | None:intergenic | 30.0% | |
| !! | TTCTGCTTTTATCGCTAATT+TGG | - | chr8_1:73041096-73041115 | Msa1213020:intron | 30.0% |
| !! | TCTGCTTTTATCGCTAATTT+GGG | - | chr8_1:73041097-73041116 | Msa1213020:intron | 30.0% |
| TAGTTAGTATGAAAATGGGT+TGG | - | chr8_1:73041255-73041274 | Msa1213020:intron | 30.0% | |
| ! | AGTTAGTATGAAAATGGGTT+GGG | - | chr8_1:73041256-73041275 | Msa1213020:intron | 30.0% |
| ACGAGCAATAGAAAAACAAA+AGG | + | chr8_1:73041382-73041401 | None:intergenic | 30.0% | |
| ! | TTTTTCTATTGCTCGTGATT+GGG | - | chr8_1:73041386-73041405 | Msa1213020:CDS | 30.0% |
| CAGATGTAAAGTAATGAGAA+AGG | + | chr8_1:73041588-73041607 | None:intergenic | 30.0% | |
| !! | TGTGGTGTCAATAGTTTTTA+AGG | - | chr8_1:73041641-73041660 | Msa1213020:CDS | 30.0% |
| ATATTGAGCTAATCAGTGTA+TGG | + | chr8_1:73041702-73041721 | None:intergenic | 30.0% | |
| !! | ATTGACGTCATTTTCAACTT+TGG | - | chr8_1:73041850-73041869 | Msa1213020:intron | 30.0% |
| ACATATAAGAACACCATCTT+TGG | + | chr8_1:73041966-73041985 | None:intergenic | 30.0% | |
| AAGAACATATGAAGTTGAAG+GGG | - | chr8_1:73042051-73042070 | Msa1213020:intron | 30.0% | |
| !!! | ATTACCACTGGATTTTTTGT+CGG | - | chr8_1:73042076-73042095 | Msa1213020:intron | 30.0% |
| TACGTCTATACAAAGCAAAA+TGG | + | chr8_1:73042372-73042391 | None:intergenic | 30.0% | |
| GAAAAAACTGGATGAAAGAA+TGG | + | chr8_1:73042496-73042515 | None:intergenic | 30.0% | |
| CTTGAAAGTGATGAAAAAAC+TGG | + | chr8_1:73042508-73042527 | None:intergenic | 30.0% | |
| ! | TGCAGTTGATTTCACATTAA+AGG | - | chr8_1:73042568-73042587 | Msa1213020:intron | 30.0% |
| TTTAGGGATCAACAGTTTAA+CGG | - | chr8_1:73042626-73042645 | Msa1213020:intron | 30.0% | |
| AAAGCTACTATGAGTAGAAA+GGG | + | chr8_1:73042657-73042676 | None:intergenic | 30.0% | |
| AAAAGCTACTATGAGTAGAA+AGG | + | chr8_1:73042658-73042677 | None:intergenic | 30.0% | |
| ! | ATGAGTTTAGAAGTACAAAG+TGG | + | chr8_1:73042751-73042770 | None:intergenic | 30.0% |
| AGAATAAGATGAAGTAAAGG+TGG | - | chr8_1:73042827-73042846 | Msa1213020:CDS | 30.0% | |
| CACATGTATAAGAGAAGAAA+AGG | + | chr8_1:73042877-73042896 | None:intergenic | 30.0% | |
| !! | GGTTCAATGATCATTTTTAC+TGG | - | chr8_1:73042922-73042941 | Msa1213020:intron | 30.0% |
| AAAAACAAGTAATCAGCAGA+CGG | + | chr8_1:73042950-73042969 | None:intergenic | 30.0% | |
| TAAGTCTATTGCCTTATCTT+TGG | - | chr8_1:73043024-73043043 | Msa1213020:intron | 30.0% | |
| TGAAAGAGATTCCAAAGATA+AGG | + | chr8_1:73043038-73043057 | None:intergenic | 30.0% | |
| !! | TTATCTTTGGAATCTCTTTC+AGG | - | chr8_1:73043037-73043056 | Msa1213020:intron | 30.0% |
| !!! | AGTACTGGATTTTTTATCTC+AGG | + | chr8_1:73043136-73043155 | None:intergenic | 30.0% |
| CATTCATACAATAAGATTGG+AGG | + | chr8_1:73043256-73043275 | None:intergenic | 30.0% | |
| TATTGTATGAATGTGATGGT+TGG | - | chr8_1:73043263-73043282 | Msa1213020:intron | 30.0% | |
| !! | TCCATGAGTTGATATTGTAA+CGG | - | chr8_1:73043307-73043326 | Msa1213020:intron | 30.0% |
| CATATGCACAATAAAAATGC+TGG | + | chr8_1:73043348-73043367 | None:intergenic | 30.0% | |
| !! | TGTCACTTTAGCTTAAGTTT+AGG | - | chr8_1:73043399-73043418 | Msa1213020:CDS | 30.0% |
| ! | TTTGGAATAAACATTCCAAC+AGG | + | chr8_1:73043510-73043529 | None:intergenic | 30.0% |
| TGTTGGAATGTTTATTCCAA+AGG | - | chr8_1:73043509-73043528 | Msa1213020:CDS | 30.0% | |
| ! | AGCATGAAATTTAAGACCTT+TGG | + | chr8_1:73043528-73043547 | None:intergenic | 30.0% |
| TAAATAACAGGTGAAATGGT+CGG | - | chr8_1:73043628-73043647 | Msa1213020:intron | 30.0% | |
| GATATATACACAAGTGAAGT+TGG | + | chr8_1:73043767-73043786 | None:intergenic | 30.0% | |
| ! | GTGAGTAATGTATTTTACCT+TGG | - | chr8_1:73043857-73043876 | Msa1213020:intron | 30.0% |
| CATCAATTTGTAGAAGATCA+AGG | + | chr8_1:73043889-73043908 | None:intergenic | 30.0% | |
| ATGATTATGTGCAGTCATAT+TGG | - | chr8_1:73044023-73044042 | Msa1213020:CDS | 30.0% | |
| TGATTATGTGCAGTCATATT+GGG | - | chr8_1:73044024-73044043 | Msa1213020:CDS | 30.0% | |
| CATATTGCTTTATGTAGTCT+AGG | + | chr8_1:73044069-73044088 | None:intergenic | 30.0% | |
| AAGCAATATGTTGTAGGAAT+TGG | - | chr8_1:73044079-73044098 | Msa1213020:CDS | 30.0% | |
| TGATTACTGGATCAACAAAA+TGG | - | chr8_1:73044645-73044664 | Msa1213020:intron | 30.0% | |
| GATTACTGGATCAACAAAAT+GGG | - | chr8_1:73044646-73044665 | Msa1213020:intron | 30.0% | |
| ATCAACAAAATGGGAATTGA+TGG | - | chr8_1:73044655-73044674 | Msa1213020:intron | 30.0% | |
| ! | TGGTAGTCTTCATAATTTTC+AGG | - | chr8_1:73044696-73044715 | Msa1213020:intron | 30.0% |
| !! | GTCTTCATAATTTTCAGGAA+TGG | - | chr8_1:73044701-73044720 | Msa1213020:intron | 30.0% |
| !!! | CGCTTATGAATGATTTTTTG+AGG | - | chr8_1:73044792-73044811 | Msa1213020:intron | 30.0% |
| ! | GTAAAAAAAAAGCATGTGCT+TGG | - | chr8_1:73044828-73044847 | Msa1213020:five_prime_UTR | 30.0% |
| CATGACAACCTGGAAAAAAA+AGG | + | chr8_1:73040416-73040435 | None:intergenic | 35.0% | |
| CTCAAATTATCATGACAACC+TGG | + | chr8_1:73040426-73040445 | None:intergenic | 35.0% | |
| ! | AACCGATTTAGAACGTAAGT+AGG | - | chr8_1:73040465-73040484 | Msa1213020:three_prime_UTR | 35.0% |
| AAGTAGGAACAAAGAAATGC+GGG | - | chr8_1:73040481-73040500 | Msa1213020:three_prime_UTR | 35.0% | |
| ATCTCAATGTCTTCGTTATC+GGG | - | chr8_1:73040640-73040659 | Msa1213020:three_prime_UTR | 35.0% | |
| !! | GAAAATTGAAGCAAGTTGGT+TGG | + | chr8_1:73040735-73040754 | None:intergenic | 35.0% |
| ATAGATAGATTAAGTGGCCA+AGG | - | chr8_1:73040857-73040876 | Msa1213020:CDS | 35.0% | |
| TAGATAGATTAAGTGGCCAA+GGG | - | chr8_1:73040858-73040877 | Msa1213020:CDS | 35.0% | |
| AATGAAAATTGGGTTTCCCT+TGG | + | chr8_1:73040877-73040896 | None:intergenic | 35.0% | |
| ! | AGAAACATTTGAAGGCATGA+AGG | + | chr8_1:73041019-73041038 | None:intergenic | 35.0% |
| ! | TCTTTTCATGAATCCCTAAC+TGG | - | chr8_1:73041038-73041057 | Msa1213020:intron | 35.0% |
| GACACATATCTAATCCAGTT+AGG | + | chr8_1:73041055-73041074 | None:intergenic | 35.0% | |
| ! | TGGATTAGATATGTGTCCAT+TGG | - | chr8_1:73041058-73041077 | Msa1213020:intron | 35.0% |
| AGCATGAGATGATATACCAA+TGG | + | chr8_1:73041077-73041096 | None:intergenic | 35.0% | |
| CAGTTAGAGTTACTGATGAT+CGG | + | chr8_1:73041211-73041230 | None:intergenic | 35.0% | |
| ! | TAACTCTAACTGGCTTATCA+GGG | - | chr8_1:73041219-73041238 | Msa1213020:intron | 35.0% |
| ! | ATGATTTGTCACACCAAGTT+GGG | + | chr8_1:73041340-73041359 | None:intergenic | 35.0% |
| ! | TATGATTTGTCACACCAAGT+TGG | + | chr8_1:73041341-73041360 | None:intergenic | 35.0% |
| ! | GTTTTTCTATTGCTCGTGAT+TGG | - | chr8_1:73041385-73041404 | Msa1213020:CDS | 35.0% |
| ! | TTTTCTATTGCTCGTGATTG+GGG | - | chr8_1:73041387-73041406 | Msa1213020:CDS | 35.0% |
| ! | ATTTTGCCAGAAGAGTTATG+TGG | + | chr8_1:73041559-73041578 | None:intergenic | 35.0% |
| !!! | AATAGTTTTTAAGGTGCCCA+TGG | - | chr8_1:73041650-73041669 | Msa1213020:CDS | 35.0% |
| GTTTGTGCATAATTGTAGCA+TGG | + | chr8_1:73041802-73041821 | None:intergenic | 35.0% | |
| !!! | TTTTTTGCAGAGAGCTATTG+AGG | - | chr8_1:73041904-73041923 | Msa1213020:intron | 35.0% |
| TATTATCAAGAGTAACGTCG+TGG | + | chr8_1:73041991-73042010 | None:intergenic | 35.0% | |
| ! | CCTCCCAATATATTTTACGA+AGG | + | chr8_1:73042140-73042159 | None:intergenic | 35.0% |
| CCTTCGTAAAATATATTGGG+AGG | - | chr8_1:73042137-73042156 | Msa1213020:intron | 35.0% | |
| !! | ATTTCTAGTGACACCTATTC+TGG | - | chr8_1:73042219-73042238 | Msa1213020:intron | 35.0% |
| ! | ACTTTTATTGAACGTCCTCT+TGG | - | chr8_1:73042269-73042288 | Msa1213020:intron | 35.0% |
| ! | CTTTTATTGAACGTCCTCTT+GGG | - | chr8_1:73042270-73042289 | Msa1213020:intron | 35.0% |
| !! | AATTTGTTAAGATGCCCAAG+AGG | + | chr8_1:73042287-73042306 | None:intergenic | 35.0% |
| CTTGGGCATCTTAACAAATT+TGG | - | chr8_1:73042287-73042306 | Msa1213020:intron | 35.0% | |
| TAAAGGAATTAAAGTCGCTG+AGG | - | chr8_1:73042585-73042604 | Msa1213020:intron | 35.0% | |
| AAAGGAATTAAAGTCGCTGA+GGG | - | chr8_1:73042586-73042605 | Msa1213020:intron | 35.0% | |
| AGGTGGAAATATCCTTTACA+AGG | - | chr8_1:73042844-73042863 | Msa1213020:CDS | 35.0% | |
| !! | AAAGGAGAGTATCCTTGTAA+AGG | + | chr8_1:73042859-73042878 | None:intergenic | 35.0% |
| TAGACTTAGCCATTTCAATG+CGG | + | chr8_1:73043012-73043031 | None:intergenic | 35.0% | |
| AGAGTTCATTACCATAGCAT+TGG | - | chr8_1:73043084-73043103 | Msa1213020:intron | 35.0% | |
| GGATATATTCCAACAACTCT+GGG | + | chr8_1:73043115-73043134 | None:intergenic | 35.0% | |
| AGGATATATTCCAACAACTC+TGG | + | chr8_1:73043116-73043135 | None:intergenic | 35.0% | |
| ! | ACATGCTGATTGATAAGTAC+TGG | + | chr8_1:73043151-73043170 | None:intergenic | 35.0% |
| ATCCAATAAACTTCTGTCTG+TGG | - | chr8_1:73043188-73043207 | Msa1213020:intron | 35.0% | |
| TCCGTTACAATATCAACTCA+TGG | + | chr8_1:73043311-73043330 | None:intergenic | 35.0% | |
| TTTGGAAGTTTCGAAAGATC+CGG | - | chr8_1:73043458-73043477 | Msa1213020:CDS | 35.0% | |
| AATCCTCTCTTAGTACAATC+CGG | + | chr8_1:73043480-73043499 | None:intergenic | 35.0% | |
| ! | AGAGGATTTTTATCACCTGT+TGG | - | chr8_1:73043492-73043511 | Msa1213020:CDS | 35.0% |
| ! | CTTTTAGTCCATTTCCTTAG+AGG | - | chr8_1:73043576-73043595 | Msa1213020:intron | 35.0% |
| !! | ACAGGTTTGTTGAAACACTT+CGG | - | chr8_1:73043669-73043688 | Msa1213020:intron | 35.0% |
| GTTGAAACACTTCGGAAATA+TGG | - | chr8_1:73043677-73043696 | Msa1213020:intron | 35.0% | |
| ACTTCGGAAATATGGATACA+AGG | - | chr8_1:73043685-73043704 | Msa1213020:intron | 35.0% | |
| CTTCGGAAATATGGATACAA+GGG | - | chr8_1:73043686-73043705 | Msa1213020:intron | 35.0% | |
| GTTCATACCTGTCAAAACAT+TGG | - | chr8_1:73043708-73043727 | Msa1213020:intron | 35.0% | |
| !!! | GTTTCAACCAATGTTTTGAC+AGG | + | chr8_1:73043718-73043737 | None:intergenic | 35.0% |
| GCAAATGACTGTATAAATGC+AGG | + | chr8_1:73043743-73043762 | None:intergenic | 35.0% | |
| TTCAACACAAGACACTAATC+AGG | - | chr8_1:73043835-73043854 | Msa1213020:intron | 35.0% | |
| ATCACATAGTTGTTAACCAC+AGG | + | chr8_1:73044127-73044146 | None:intergenic | 35.0% | |
| !! | CCACACAATCTTTTGAAGAT+TGG | + | chr8_1:73044248-73044267 | None:intergenic | 35.0% |
| CCAATCTTCAAAAGATTGTG+TGG | - | chr8_1:73044245-73044264 | Msa1213020:intron | 35.0% | |
| AGTGCAGTGATATGTCATAA+CGG | - | chr8_1:73044345-73044364 | Msa1213020:intron | 35.0% | |
| TTGTGCTAAATGGCATATCA+CGG | + | chr8_1:73044394-73044413 | None:intergenic | 35.0% | |
| !! | ATGATTGTTGATGATGATGC+AGG | - | chr8_1:73044549-73044568 | Msa1213020:intron | 35.0% |
| TTCTCATTTCTGTACGTGTA+TGG | + | chr8_1:73044580-73044599 | None:intergenic | 35.0% | |
| CTTTAGTCAAGATCCTTACA+AGG | - | chr8_1:73044618-73044637 | Msa1213020:intron | 35.0% | |
| CAGTAATCATACTCCTTGTA+AGG | + | chr8_1:73044634-73044653 | None:intergenic | 35.0% | |
| ! | CTTACAAGGAGTATGATTAC+TGG | - | chr8_1:73044632-73044651 | Msa1213020:intron | 35.0% |
| TACCAGTGAAATCTGTAAAC+AGG | + | chr8_1:73044681-73044700 | None:intergenic | 35.0% | |
| !!! | TGATTTTTTGAGGTGTCAGA+TGG | - | chr8_1:73044802-73044821 | Msa1213020:intron | 35.0% |
| AGTAGGAACAAAGAAATGCG+GGG | - | chr8_1:73040482-73040501 | Msa1213020:three_prime_UTR | 40.0% | |
| GTATCGTAGGAACGTGAAAA+TGG | + | chr8_1:73040561-73040580 | None:intergenic | 40.0% | |
| TTGAGTCTTCTTCGTATCGT+AGG | + | chr8_1:73040574-73040593 | None:intergenic | 40.0% | |
| !! | ATTGAAGCAAGTTGGTTGGT+TGG | + | chr8_1:73040731-73040750 | None:intergenic | 40.0% |
| CGATCATCAGTAACTCTAAC+TGG | - | chr8_1:73041209-73041228 | Msa1213020:intron | 40.0% | |
| ! | GTAACTCTAACTGGCTTATC+AGG | - | chr8_1:73041218-73041237 | Msa1213020:intron | 40.0% |
| !! | AGTATGAAAATGGGTTGGGT+TGG | - | chr8_1:73041260-73041279 | Msa1213020:intron | 40.0% |
| CAGCTAAATATCTCCCAACT+TGG | - | chr8_1:73041324-73041343 | Msa1213020:CDS | 40.0% | |
| TTTCTATTGCTCGTGATTGG+GGG | - | chr8_1:73041388-73041407 | Msa1213020:CDS | 40.0% | |
| TATGGGCGAAAAGTTTGAAG+AGG | + | chr8_1:73041469-73041488 | None:intergenic | 40.0% | |
| CCCTATGTGCAACGTTATAT+GGG | + | chr8_1:73041486-73041505 | None:intergenic | 40.0% | |
| CCCATATAACGTTGCACATA+GGG | - | chr8_1:73041483-73041502 | Msa1213020:intron | 40.0% | |
| CCATATAACGTTGCACATAG+GGG | - | chr8_1:73041484-73041503 | Msa1213020:intron | 40.0% | |
| GTGAATCCACATAACTCTTC+TGG | - | chr8_1:73041550-73041569 | Msa1213020:intron | 40.0% | |
| GCTAATCAGTGTATGGTCAA+TGG | + | chr8_1:73041695-73041714 | None:intergenic | 40.0% | |
| !! | AGTACCGACAAAAAATCCAG+TGG | + | chr8_1:73042083-73042102 | None:intergenic | 40.0% |
| ! | ATGAGCTGACTTTCCAGAAT+AGG | + | chr8_1:73042235-73042254 | None:intergenic | 40.0% |
| TGAATCAGAGGTTCAGCTTT+AGG | - | chr8_1:73042609-73042628 | Msa1213020:intron | 40.0% | |
| GAATCAGAGGTTCAGCTTTA+GGG | - | chr8_1:73042610-73042629 | Msa1213020:intron | 40.0% | |
| AGACTTAGCCATTTCAATGC+GGG | + | chr8_1:73043011-73043030 | None:intergenic | 40.0% | |
| TGCCACAGACAGAAGTTTAT+TGG | + | chr8_1:73043193-73043212 | None:intergenic | 40.0% | |
| ATGTTGTAGGAATTGGACCT+TGG | - | chr8_1:73044086-73044105 | Msa1213020:intron | 40.0% | |
| GGTACTATAGTATCCTTCCA+AGG | + | chr8_1:73044106-73044125 | None:intergenic | 40.0% | |
| GAAGGATACTATAGTACCTG+TGG | - | chr8_1:73044108-73044127 | Msa1213020:intron | 40.0% | |
| CAACTATGTGATGACTCCTT+CGG | - | chr8_1:73044135-73044154 | Msa1213020:intron | 40.0% | |
| TGGCAACACTTTGTGCTAAA+TGG | + | chr8_1:73044404-73044423 | None:intergenic | 40.0% | |
| !! | CACAAAGTGTTGCCAAATAG+TGG | - | chr8_1:73044409-73044428 | Msa1213020:intron | 40.0% |
| ! | GAGCAAACCAGTATTTTCTG+CGG | - | chr8_1:73044461-73044480 | Msa1213020:intron | 40.0% |
| TATTGGACCGCAGAAAATAC+TGG | + | chr8_1:73044471-73044490 | None:intergenic | 40.0% | |
| TCGAGCAGTGTTGTCAATAT+TGG | + | chr8_1:73044488-73044507 | None:intergenic | 40.0% | |
| TCTTGTCATCTTGACGGTTA+GGG | + | chr8_1:73044732-73044751 | None:intergenic | 40.0% | |
| ! | ATGCAGTCTTGTCATCTTGA+CGG | + | chr8_1:73044738-73044757 | None:intergenic | 40.0% |
| TTGAAGCTAGGATTACTGAG+TGG | - | chr8_1:73045033-73045052 | Msa1213020:five_prime_UTR | 40.0% | |
| TGAAGCTAGGATTACTGAGT+GGG | - | chr8_1:73045034-73045053 | Msa1213020:five_prime_UTR | 40.0% | |
| ATTAAAGTCGTTGCTTGCCG+CGG | + | chr8_1:73040532-73040551 | None:intergenic | 45.0% | |
| ATGTGTTGTGTTCGTCACTC+AGG | + | chr8_1:73040603-73040622 | None:intergenic | 45.0% | |
| TTGCCAGGAAGTGGATACAA+AGG | + | chr8_1:73041424-73041443 | None:intergenic | 45.0% | |
| TTGTATCCACTTCCTGGCAA+AGG | - | chr8_1:73041424-73041443 | Msa1213020:intron | 45.0% | |
| GCCCATATAACGTTGCACAT+AGG | - | chr8_1:73041482-73041501 | Msa1213020:intron | 45.0% | |
| CCCCTATGTGCAACGTTATA+TGG | + | chr8_1:73041487-73041506 | None:intergenic | 45.0% | |
| TATGCAGCACAGTGAACCAT+GGG | + | chr8_1:73041669-73041688 | None:intergenic | 45.0% | |
| ATATGCAGCACAGTGAACCA+TGG | + | chr8_1:73041670-73041689 | None:intergenic | 45.0% | |
| TTGCAGAGAGCTATTGAGGA+AGG | - | chr8_1:73041908-73041927 | Msa1213020:intron | 45.0% | |
| TACTTTGGCCCGCATTGAAA+TGG | - | chr8_1:73043000-73043019 | Msa1213020:intron | 45.0% | |
| ! | ATGAATGTGATGGTTGGTGC+TGG | - | chr8_1:73043269-73043288 | Msa1213020:intron | 45.0% |
| GATCCGGATTGTACTAAGAG+AGG | - | chr8_1:73043474-73043493 | Msa1213020:CDS | 45.0% | |
| AAGAAAGCAGACAGCCTCTA+AGG | + | chr8_1:73043593-73043612 | None:intergenic | 45.0% | |
| TAACAGGTGAAATGGTCGGA+CGG | - | chr8_1:73043632-73043651 | Msa1213020:intron | 45.0% | |
| GAAGATCAAGGGATAAGCCA+AGG | + | chr8_1:73043877-73043896 | None:intergenic | 45.0% | |
| TGTAGGAATTGGACCTTGGA+AGG | - | chr8_1:73044090-73044109 | Msa1213020:intron | 45.0% | |
| GGCCTGTTTACAGATTTCAC+TGG | - | chr8_1:73044676-73044695 | Msa1213020:intron | 45.0% | |
| CTTGTCATCTTGACGGTTAG+GGG | + | chr8_1:73044731-73044750 | None:intergenic | 45.0% | |
| GTCTTGTCATCTTGACGGTT+AGG | + | chr8_1:73044733-73044752 | None:intergenic | 45.0% | |
| !!! | ACATTTTTAAAAATATAATT+TGG | + | chr8_1:73041624-73041643 | None:intergenic | 5.0% |
| !!! | AAATTATATTTTTAAAAATG+TGG | - | chr8_1:73041623-73041642 | Msa1213020:CDS | 5.0% |
| ATGCGGGGAATATTCGCTTG+TGG | - | chr8_1:73040497-73040516 | Msa1213020:three_prime_UTR | 50.0% | |
| AGGCCTTTGTATCCACTTCC+TGG | - | chr8_1:73041418-73041437 | Msa1213020:intron | 50.0% | |
| GAAGAGGCTGCTTACTTCCA+TGG | + | chr8_1:73041453-73041472 | None:intergenic | 50.0% | |
| GTTGCACATAGGGGCTCAAA+TGG | - | chr8_1:73041493-73041512 | Msa1213020:intron | 50.0% | |
| ACTTCCTGAAGAAACTCGCG+AGG | - | chr8_1:73041519-73041538 | Msa1213020:intron | 50.0% | |
| TATGCCTCGCGAGTTTCTTC+AGG | + | chr8_1:73041526-73041545 | None:intergenic | 50.0% | |
| AGAAACTCGCGAGGCATATC+TGG | - | chr8_1:73041528-73041547 | Msa1213020:intron | 50.0% | |
| GTTGAAGGGGTCATTACCAC+TGG | - | chr8_1:73042064-73042083 | Msa1213020:intron | 50.0% | |
| TCTGGGTGCATCCAATGCTA+TGG | + | chr8_1:73043098-73043117 | None:intergenic | 50.0% | |
| TTGGATGCACCCAGAGTTGT+TGG | - | chr8_1:73043103-73043122 | Msa1213020:intron | 50.0% | |
| ! | GCAGACAGCCTCTAAGGAAA+TGG | + | chr8_1:73043587-73043606 | None:intergenic | 50.0% |
| ACGGCAAACGATTTGAGGAC+AGG | - | chr8_1:73043651-73043670 | Msa1213020:intron | 50.0% | |
| TCCTTCGGATCTTGTTGCCA+GGG | - | chr8_1:73044150-73044169 | Msa1213020:intron | 50.0% | |
| CAGATTATGAGCATGTGCCC+TGG | + | chr8_1:73044170-73044189 | None:intergenic | 50.0% | |
| GGCACATGCTCATAATCTGC+AGG | - | chr8_1:73044171-73044190 | Msa1213020:intron | 50.0% | |
| ! | AGTGCTGTTGCGCCACTATT+TGG | + | chr8_1:73044424-73044443 | None:intergenic | 50.0% |
| GCTTGTGGACCCTATTTCCG+CGG | - | chr8_1:73040512-73040531 | Msa1213020:three_prime_UTR | 55.0% | |
| CGTTGCTTGCCGCGGAAATA+GGG | + | chr8_1:73040524-73040543 | None:intergenic | 55.0% | |
| TCGTTGCTTGCCGCGGAAAT+AGG | + | chr8_1:73040525-73040544 | None:intergenic | 55.0% | |
| ATTGCTCGTGATTGGGGGCA+CGG | - | chr8_1:73041393-73041412 | Msa1213020:CDS | 55.0% | |
| TGGTCACCTTTGCCAGGAAG+TGG | + | chr8_1:73041433-73041452 | None:intergenic | 55.0% | |
| CTTCCTGGCAAAGGTGACCA+TGG | - | chr8_1:73041433-73041452 | Msa1213020:intron | 55.0% | |
| CTTCCATGGTCACCTTTGCC+AGG | + | chr8_1:73041439-73041458 | None:intergenic | 55.0% | |
| AGTCGCTGAGGGTGAATCAG+AGG | - | chr8_1:73042597-73042616 | Msa1213020:intron | 55.0% | |
| GTCGGACGGCAAACGATTTG+AGG | - | chr8_1:73043646-73043665 | Msa1213020:intron | 55.0% | |
| CTCCTTCGGATCTTGTTGCC+AGG | - | chr8_1:73044149-73044168 | Msa1213020:intron | 55.0% | |
| GCCCTGGCAACAAGATCCGA+AGG | + | chr8_1:73044154-73044173 | None:intergenic | 60.0% | |
| GGCGCAACAGCACTGTAGCA+TGG | - | chr8_1:73044430-73044449 | Msa1213020:intron | 60.0% | |
| ! | TCGTGATTGGGGGCACGGCT+AGG | - | chr8_1:73041398-73041417 | Msa1213020:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 73040408 | 73045062 | 73040408 | ID=Msa1213020;Name=Msa1213020 |
| chr8_1 | mRNA | 73040408 | 73045062 | 73040408 | ID=Msa1213020-mRNA-1;Parent=Msa1213020;Name=Msa1213020-mRNA-1;_AED=0.13;_eAED=0.13;_QI=238|1|1|1|0.85|0.87|8|258|390 |
| chr8_1 | exon | 73040408 | 73040899 | 73040408 | ID=Msa1213020-mRNA-1:exon:24759;Parent=Msa1213020-mRNA-1 |
| chr8_1 | exon | 73041278 | 73041433 | 73041278 | ID=Msa1213020-mRNA-1:exon:24758;Parent=Msa1213020-mRNA-1 |
| chr8_1 | exon | 73041614 | 73041832 | 73041614 | ID=Msa1213020-mRNA-1:exon:24757;Parent=Msa1213020-mRNA-1 |
| chr8_1 | exon | 73042302 | 73042411 | 73042302 | ID=Msa1213020-mRNA-1:exon:24756;Parent=Msa1213020-mRNA-1 |
| chr8_1 | exon | 73042823 | 73042897 | 73042823 | ID=Msa1213020-mRNA-1:exon:24755;Parent=Msa1213020-mRNA-1 |
| chr8_1 | exon | 73043373 | 73043556 | 73043373 | ID=Msa1213020-mRNA-1:exon:24754;Parent=Msa1213020-mRNA-1 |
| chr8_1 | exon | 73043921 | 73044099 | 73043921 | ID=Msa1213020-mRNA-1:exon:24753;Parent=Msa1213020-mRNA-1 |
| chr8_1 | exon | 73044809 | 73045062 | 73044809 | ID=Msa1213020-mRNA-1:exon:24752;Parent=Msa1213020-mRNA-1 |
| chr8_1 | five_prime_UTR | 73044825 | 73045062 | 73044825 | ID=Msa1213020-mRNA-1:five_prime_utr;Parent=Msa1213020-mRNA-1 |
| chr8_1 | CDS | 73044809 | 73044824 | 73044809 | ID=Msa1213020-mRNA-1:cds;Parent=Msa1213020-mRNA-1 |
| chr8_1 | CDS | 73043921 | 73044099 | 73043921 | ID=Msa1213020-mRNA-1:cds;Parent=Msa1213020-mRNA-1 |
| chr8_1 | CDS | 73043373 | 73043556 | 73043373 | ID=Msa1213020-mRNA-1:cds;Parent=Msa1213020-mRNA-1 |
| chr8_1 | CDS | 73042823 | 73042897 | 73042823 | ID=Msa1213020-mRNA-1:cds;Parent=Msa1213020-mRNA-1 |
| chr8_1 | CDS | 73042302 | 73042411 | 73042302 | ID=Msa1213020-mRNA-1:cds;Parent=Msa1213020-mRNA-1 |
| chr8_1 | CDS | 73041614 | 73041832 | 73041614 | ID=Msa1213020-mRNA-1:cds;Parent=Msa1213020-mRNA-1 |
| chr8_1 | CDS | 73041278 | 73041433 | 73041278 | ID=Msa1213020-mRNA-1:cds;Parent=Msa1213020-mRNA-1 |
| chr8_1 | CDS | 73040666 | 73040899 | 73040666 | ID=Msa1213020-mRNA-1:cds;Parent=Msa1213020-mRNA-1 |
| chr8_1 | three_prime_UTR | 73040408 | 73040665 | 73040408 | ID=Msa1213020-mRNA-1:three_prime_utr;Parent=Msa1213020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
