AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1214690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214690 MtrunA17_Chr4g0063821 98.020 101 2 0 1 101 1 101 4.87e-70 204
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214690 AT5G20180.2 54.369 103 43 2 1 101 1 101 2.35e-33 111
Msa1214690 AT5G20180.1 54.369 103 43 2 1 101 1 101 2.35e-33 111
Msa1214690 AT5G20180.3 54.369 103 43 2 1 101 1 101 2.35e-33 111
Msa1214690 AT5G20180.4 54.369 103 43 2 1 101 1 101 2.35e-33 111

Find 69 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCGTCCTTTACGCTTAA+TGG 0.156568 8_1:-75408078 None:intergenic
AAACCTGTGGATGCTGTTTC+TGG 0.228570 8_1:-75407867 None:intergenic
TTAGTCAATCATACTGGATT+TGG 0.230583 8_1:+75412644 Msa1214690:three_prime_UTR
GCACGAGTTATAAGGTTTAA+TGG 0.231660 8_1:-75412861 None:intergenic
CCTTGTCTTTGTTTATGCTT+AGG 0.255309 8_1:-75408122 None:intergenic
CATCATTAGCACGAGTTATA+AGG 0.262358 8_1:-75412869 None:intergenic
ATGAACTGGATTGGGCCTTT+TGG 0.263063 8_1:-75407731 None:intergenic
CCAGACCTGTTCGTGAAGTA+TGG 0.321946 8_1:-75412502 None:intergenic
CTTGTCTTTGTTTATGCTTA+GGG 0.336773 8_1:-75408121 None:intergenic
TTGTATGATATGGATAGATA+TGG 0.349995 8_1:+75413001 Msa1214690:three_prime_UTR
GTGATCTGATTTGTATGATA+TGG 0.352922 8_1:+75412991 Msa1214690:three_prime_UTR
ATAGACAAGCTGTGCCTTTG+AGG 0.358151 8_1:-75412536 None:intergenic
GTTTCTACGACGACGAAATC+CGG 0.368639 8_1:-75407836 None:intergenic
CGCAAAACAAAACAAGTATA+AGG 0.369128 8_1:-75412712 None:intergenic
TAGTCAATCATACTGGATTT+GGG 0.373277 8_1:+75412645 Msa1214690:three_prime_UTR
AGAAAATGTGTGAGTATTGT+AGG 0.402217 8_1:+75408054 Msa1214690:CDS
CATTATGTTTCAATGTTCAC+TGG 0.407599 8_1:+75412806 Msa1214690:three_prime_UTR
CAGGTCACACAATTCATGTT+AGG 0.416105 8_1:-75413073 None:intergenic
ATCAGTGGGGCACAATTAAT+AGG 0.418856 8_1:+75412829 Msa1214690:three_prime_UTR
TCACCTACAACTCCACTTCC+CGG 0.421434 8_1:+75407817 Msa1214690:five_prime_UTR
ATACAGAAACAGAGACTTGT+TGG 0.425678 8_1:+75413040 Msa1214690:three_prime_UTR
GTTATAAGGTTTAATGGAGG+TGG 0.445802 8_1:-75412855 None:intergenic
CAACGGCAAGAAGGGTAAAA+CGG 0.449299 8_1:-75407767 None:intergenic
TTCAATGTTCACTGGATCAG+TGG 0.457318 8_1:+75412814 Msa1214690:three_prime_UTR
AACGGCAAGAAGGGTAAAAC+GGG 0.465272 8_1:-75407766 None:intergenic
CCATACTTCACGAACAGGTC+TGG 0.465981 8_1:+75412502 Msa1214690:CDS
GTATGGATGGAGAGTTGGCC+TGG 0.467176 8_1:+75412562 Msa1214690:CDS
CCAATCCATACTTCACGAAC+AGG 0.468835 8_1:+75412497 Msa1214690:CDS
ATATTGTTAGTCAATCATAC+TGG 0.472168 8_1:+75412638 Msa1214690:three_prime_UTR
AATCCGGGAAGTGGAGTTGT+AGG 0.472734 8_1:-75407820 None:intergenic
TATTTGATATGCCTCACTCT+TGG 0.474560 8_1:+75412738 Msa1214690:three_prime_UTR
CTCTATTCTGTCTAAGAAGT+AGG 0.476774 8_1:+75412586 Msa1214690:CDS
GTAGGTGAGGCGAATTCAGC+TGG 0.481690 8_1:-75407802 None:intergenic
CACAGCTTGTCTATGTTGTA+TGG 0.485820 8_1:+75412545 Msa1214690:CDS
GTGGAGGGTGGTAAAAGAAA+TGG 0.486586 8_1:+75407681 None:intergenic
AAGTTCAAGTTGTGCTGCGC+AGG 0.490220 8_1:+75412466 Msa1214690:CDS
TTTCTACGACGACGAAATCC+GGG 0.505295 8_1:-75407835 None:intergenic
TCAATGTTCACTGGATCAGT+GGG 0.509943 8_1:+75412815 Msa1214690:three_prime_UTR
CTACTTCTTAGACAGAATAG+AGG 0.512181 8_1:-75412585 None:intergenic
CGACGACGAAATCCGGGAAG+TGG 0.516141 8_1:-75407829 None:intergenic
GATGAGATTCTAATCCCAAA+AGG 0.517821 8_1:+75407716 Msa1214690:five_prime_UTR
CCTGTTCGTGAAGTATGGAT+TGG 0.529692 8_1:-75412497 None:intergenic
AAAACATACGGCTGATGCGA+CGG 0.531919 8_1:-75408170 None:intergenic
TTAAAATCAATTCAGGTCTG+TGG 0.531970 8_1:+75412439 Msa1214690:intron
AGAGTGAGGCATATCAAATA+CGG 0.542257 8_1:-75412735 None:intergenic
TCTTAGACAGAATAGAGGCC+AGG 0.554562 8_1:-75412580 None:intergenic
TGATGATACAACGGCAAGAA+GGG 0.555268 8_1:-75407775 None:intergenic
TGTATGATATGGATAGATAT+GGG 0.555279 8_1:+75413002 Msa1214690:three_prime_UTR
CTAACATGAATTGTGTGACC+TGG 0.560313 8_1:+75413074 Msa1214690:three_prime_UTR
TCTATTCTGTCTAAGAAGTA+GGG 0.562971 8_1:+75412587 Msa1214690:CDS
ATGTTGTATGGATGGAGAGT+TGG 0.567494 8_1:+75412557 Msa1214690:CDS
GTGATGATACAACGGCAAGA+AGG 0.568828 8_1:-75407776 None:intergenic
TACTTGTTCAGAAATCATGA+AGG 0.577487 8_1:+75408016 Msa1214690:intron
TGTAGGACCATTAAGCGTAA+AGG 0.578485 8_1:+75408071 Msa1214690:CDS
GCTTGTCTATGTTGTATGGA+TGG 0.580109 8_1:+75412549 Msa1214690:CDS
TTATAAGGTTTAATGGAGGT+GGG 0.583369 8_1:-75412854 None:intergenic
CCGCCAGAAACAGCATCCAC+AGG 0.623224 8_1:+75407864 Msa1214690:five_prime_UTR
CCTGTGGATGCTGTTTCTGG+CGG 0.624713 8_1:-75407864 None:intergenic
CAACGAAGAGAGAGAGCTAG+AGG 0.626984 8_1:-75412668 None:intergenic
AGAAACAGAGACTTGTTGGT+AGG 0.631112 8_1:+75413044 Msa1214690:three_prime_UTR
TGGCTTCTATAATTCCTCAA+AGG 0.633307 8_1:+75412522 Msa1214690:CDS
CCTAAGCATAAACAAAGACA+AGG 0.649194 8_1:+75408122 Msa1214690:CDS
TCGTCAATATGGTCAACAGA+AGG 0.649586 8_1:+75412772 Msa1214690:three_prime_UTR
AGAAACAAAAGCCAAGAGTG+AGG 0.659070 8_1:-75412749 None:intergenic
CGAGTTATAAGGTTTAATGG+AGG 0.664147 8_1:-75412858 None:intergenic
GCTGGTTTGTGATGATACAA+CGG 0.670452 8_1:-75407784 None:intergenic
GCATCACTCTCAGTCACGTG+TGG 0.683240 8_1:+75412948 Msa1214690:three_prime_UTR
GGGAAGTGGAGTTGTAGGTG+AGG 0.694196 8_1:-75407815 None:intergenic
CAATGTTCACTGGATCAGTG+GGG 0.729205 8_1:+75412816 Msa1214690:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGTTTTAAAATTTTGTTAT+GGG - chr8_1:75409027-75409046 None:intergenic 10.0%
!!! AAAGTTTTAAAATTTTGTTA+TGG - chr8_1:75409028-75409047 None:intergenic 10.0%
!!! CATATTTTTATGTTATTTTA+TGG - chr8_1:75409441-75409460 None:intergenic 10.0%
!!! TATTATTTGATAACTTATTA+AGG - chr8_1:75409773-75409792 None:intergenic 10.0%
!!! TAAATTTTTAAAATCAATTC+AGG + chr8_1:75412432-75412451 Msa1214690:intron 10.0%
!! AAGAATTAAATTGAATGAAA+AGG - chr8_1:75407911-75407930 None:intergenic 15.0%
!! AATAAAAGAAAGAAAACATA+CGG - chr8_1:75408185-75408204 None:intergenic 15.0%
!! CATATAAAATTAGAATTTCA+AGG + chr8_1:75409188-75409207 Msa1214690:intron 15.0%
!!! ATTTTTATGTTATTTTATGG+TGG - chr8_1:75409438-75409457 None:intergenic 15.0%
!!! TGTTTATATACATTTTATCA+TGG + chr8_1:75409459-75409478 Msa1214690:intron 15.0%
!!! GTTTATATACATTTTATCAT+GGG + chr8_1:75409460-75409479 Msa1214690:intron 15.0%
!!! TTTATATACATTTTATCATG+GGG + chr8_1:75409461-75409480 Msa1214690:intron 15.0%
!!! TACATATTAAGATTATTTTG+GGG - chr8_1:75410171-75410190 None:intergenic 15.0%
!!! CTACATATTAAGATTATTTT+GGG - chr8_1:75410172-75410191 None:intergenic 15.0%
!! TAATAATTACTCATAACTTT+AGG - chr8_1:75410761-75410780 None:intergenic 15.0%
!!! GTTCTTATGTTTTTTATTAT+AGG - chr8_1:75411430-75411449 None:intergenic 15.0%
!!! TATTTTGTAAAATATACACT+TGG - chr8_1:75411659-75411678 None:intergenic 15.0%
!! AGTAAAATTAGGATATAAAA+AGG + chr8_1:75411826-75411845 Msa1214690:intron 15.0%
!! AGTAAAATTAGGATATAAAA+AGG + chr8_1:75411826-75411845 Msa1214690:intron 15.0%
!!! TTGAACTGGTTTTTAAATAT+CGG + chr8_1:75408615-75408634 Msa1214690:intron 20.0%
!!! TGTATACTTTTTTCATCTAA+CGG - chr8_1:75408697-75408716 None:intergenic 20.0%
!! GAAAACAAAATGAAAGAAAA+AGG + chr8_1:75409210-75409229 Msa1214690:intron 20.0%
!!! ACATATTAAGATTATTTTGG+GGG - chr8_1:75410170-75410189 None:intergenic 20.0%
!!! CCTACATATTAAGATTATTT+TGG - chr8_1:75410173-75410192 None:intergenic 20.0%
!! CCAAAATAATCTTAATATGT+AGG + chr8_1:75410170-75410189 Msa1214690:intron 20.0%
!!! GAGAAACTACTATTTTTTAT+AGG + chr8_1:75410343-75410362 Msa1214690:intron 20.0%
!!! CAACAATTATTTTAGTGAAT+AGG + chr8_1:75410562-75410581 Msa1214690:intron 20.0%
!!! AATTTTGTGAAATTGTTCTT+GGG - chr8_1:75410790-75410809 None:intergenic 20.0%
!!! AAATTTTGTGAAATTGTTCT+TGG - chr8_1:75410791-75410810 None:intergenic 20.0%
!!! AAGATTTTTATTGAGTTCAT+TGG + chr8_1:75410963-75410982 Msa1214690:intron 20.0%
!! GATAAGAATCTTAAATATCA+AGG - chr8_1:75411087-75411106 None:intergenic 20.0%
!!! CTTATATTGAGATTTTCATA+GGG + chr8_1:75411136-75411155 Msa1214690:intron 20.0%
!! AAAATGAGTTAGATAAGAAA+GGG - chr8_1:75411400-75411419 None:intergenic 20.0%
!! ACAGTAAATTAGAATTCATT+AGG + chr8_1:75411878-75411897 Msa1214690:intron 20.0%
!! CAGTAAATTAGAATTCATTA+GGG + chr8_1:75411879-75411898 Msa1214690:intron 20.0%
!! TTAGGATATAAAAAGGAATA+AGG + chr8_1:75411833-75411852 Msa1214690:intron 20.0%
!! TAGGATATAAAAAGGAATAA+GGG + chr8_1:75411834-75411853 Msa1214690:intron 20.0%
!!! CTTCTTTATAACATTTTCTT+GGG + chr8_1:75412102-75412121 Msa1214690:intron 20.0%
! TTCAAAAAATGAACTGGATT+GGG - chr8_1:75407742-75407761 None:intergenic 25.0%
!!! AAAAGGAGAATTTTGAAGAA+AGG - chr8_1:75407894-75407913 None:intergenic 25.0%
!! TTGATTGAATTTGAAGTGTT+TGG + chr8_1:75408581-75408600 Msa1214690:intron 25.0%
!! TGTTTCCGACATTTTTAATA+GGG - chr8_1:75408880-75408899 None:intergenic 25.0%
!! TTGTTTCCGACATTTTTAAT+AGG - chr8_1:75408881-75408900 None:intergenic 25.0%
! ATGGATACAATGAATTATGT+TGG - chr8_1:75408946-75408965 None:intergenic 25.0%
! AACATAATTCATTGTATCCA+TGG + chr8_1:75408945-75408964 Msa1214690:intron 25.0%
!! AAAAATGTTGATTGAAGACT+TGG - chr8_1:75409133-75409152 None:intergenic 25.0%
!!! GTTACACTTTTTTCATCTAA+CGG + chr8_1:75409359-75409378 Msa1214690:intron 25.0%
!!! TTATTTTATGGTGGATTCTA+GGG - chr8_1:75409429-75409448 None:intergenic 25.0%
! TATTAGTGTAGAAGTTATCA+TGG + chr8_1:75409489-75409508 Msa1214690:intron 25.0%
! ATTAGTGTAGAAGTTATCAT+GGG + chr8_1:75409490-75409509 Msa1214690:intron 25.0%
! GCAATAACTTAAACATCATT+TGG + chr8_1:75409652-75409671 Msa1214690:intron 25.0%
! TTCTTTAGATGAGAGATATA+GGG - chr8_1:75409843-75409862 None:intergenic 25.0%
! TTTCTTTAGATGAGAGATAT+AGG - chr8_1:75409844-75409863 None:intergenic 25.0%
!!! CATATTAAGATTATTTTGGG+GGG - chr8_1:75410169-75410188 None:intergenic 25.0%
! TAATCTTAATATGTAGGAGT+AGG + chr8_1:75410176-75410195 Msa1214690:intron 25.0%
!!! AGTTTTTAAGAAAACAAACG+TGG - chr8_1:75410313-75410332 None:intergenic 25.0%
!!! TAAGCAATTTTTTTCCCTTT+TGG + chr8_1:75410393-75410412 Msa1214690:intron 25.0%
!!! AAGCAATTTTTTTCCCTTTT+GGG + chr8_1:75410394-75410413 Msa1214690:intron 25.0%
!! GTACTTAGGAGATTTTTAAA+AGG + chr8_1:75410602-75410621 Msa1214690:intron 25.0%
!! ACTTTAGGTTCTACTTTATA+CGG - chr8_1:75410746-75410765 None:intergenic 25.0%
! AGTTATGAGTAATTATTACG+AGG + chr8_1:75410763-75410782 Msa1214690:intron 25.0%
! TGAAAACACTTAAAAGAAAC+TGG - chr8_1:75410903-75410922 None:intergenic 25.0%
!! GCTTATTATTTAAAGCTTTG+AGG + chr8_1:75410990-75411009 Msa1214690:intron 25.0%
!!! TGAAAATCAGCAGATTTTTT+TGG - chr8_1:75411115-75411134 None:intergenic 25.0%
!! GCTTATATTGAGATTTTCAT+AGG + chr8_1:75411135-75411154 Msa1214690:intron 25.0%
! AAATGAGTTAGATAAGAAAG+GGG - chr8_1:75411399-75411418 None:intergenic 25.0%
! GAAAATGAGTTAGATAAGAA+AGG - chr8_1:75411401-75411420 None:intergenic 25.0%
! TGAAAAGAAAAAATACACTG+AGG + chr8_1:75411463-75411482 Msa1214690:intron 25.0%
!!! TGTATGTTTTTGACTTTCAA+AGG - chr8_1:75411503-75411522 None:intergenic 25.0%
! AAAGTCAAAAACATACACAT+AGG + chr8_1:75411506-75411525 Msa1214690:intron 25.0%
! AACTATACGAAGAAAAGAAA+CGG + chr8_1:75411534-75411553 Msa1214690:intron 25.0%
!!! TTTTGTAACCTTAATTTGAC+AGG + chr8_1:75411612-75411631 Msa1214690:intron 25.0%
!! TTTGTAACCTTAATTTGACA+GGG + chr8_1:75411613-75411632 Msa1214690:intron 25.0%
!! TTGTTATTCATCCAACTAAT+TGG + chr8_1:75411718-75411737 Msa1214690:intron 25.0%
! TGTTATTCATCCAACTAATT+GGG + chr8_1:75411719-75411738 Msa1214690:intron 25.0%
!!! ACTGTTTTTTGTTGACAAAA+TGG + chr8_1:75411993-75412012 Msa1214690:intron 25.0%
!!! TTTTTTGTTGACAAAATGGT+AGG + chr8_1:75411997-75412016 Msa1214690:intron 25.0%
!! TTTTTGTTGACAAAATGGTA+GGG + chr8_1:75411998-75412017 Msa1214690:intron 25.0%
! CCAAGAAAATGTTATAAAGA+AGG - chr8_1:75412104-75412123 None:intergenic 25.0%
!! CCTTCTTTATAACATTTTCT+TGG + chr8_1:75412101-75412120 Msa1214690:intron 25.0%
! ATATTGTTAGTCAATCATAC+TGG + chr8_1:75412638-75412657 Msa1214690:three_prime_UTR 25.0%
! TTGTATGATATGGATAGATA+TGG + chr8_1:75413001-75413020 Msa1214690:three_prime_UTR 25.0%
! TGTATGATATGGATAGATAT+GGG + chr8_1:75413002-75413021 Msa1214690:three_prime_UTR 25.0%
CTTCAAAAAATGAACTGGAT+TGG - chr8_1:75407743-75407762 None:intergenic 30.0%
!!! ATCCAGTTCATTTTTTGAAG+AGG + chr8_1:75407743-75407762 Msa1214690:five_prime_UTR 30.0%
GCGATGTAATATGATTAATG+AGG + chr8_1:75407955-75407974 Msa1214690:intron 30.0%
TACTTGTTCAGAAATCATGA+AGG + chr8_1:75408016-75408035 Msa1214690:intron 30.0%
! AGAAAATGTGTGAGTATTGT+AGG + chr8_1:75408054-75408073 Msa1214690:CDS 30.0%
! CTTGTCTTTGTTTATGCTTA+GGG - chr8_1:75408124-75408143 None:intergenic 30.0%
!! TTATTGTTTTATGCTGCTTG+TGG + chr8_1:75408200-75408219 Msa1214690:intron 30.0%
! GCTTCATATTTAGAACCTAT+CGG - chr8_1:75408273-75408292 None:intergenic 30.0%
AGATTATTCAATTACCACCA+GGG - chr8_1:75408530-75408549 None:intergenic 30.0%
AAGATTATTCAATTACCACC+AGG - chr8_1:75408531-75408550 None:intergenic 30.0%
!!! AACTGGTTTTTAAATATCGG+TGG + chr8_1:75408618-75408637 Msa1214690:intron 30.0%
! TTTAAATATCGGTGGATTCT+AGG + chr8_1:75408626-75408645 Msa1214690:intron 30.0%
! TTAAATATCGGTGGATTCTA+GGG + chr8_1:75408627-75408646 Msa1214690:intron 30.0%
! TTTTTAATAGGGGAGGAATA+CGG - chr8_1:75408869-75408888 None:intergenic 30.0%
! GTTTCCGACATTTTTAATAG+GGG - chr8_1:75408879-75408898 None:intergenic 30.0%
AACCATAATAAAGGTTAGCA+GGG + chr8_1:75408899-75408918 Msa1214690:intron 30.0%
GATACAATGAATTATGTTGG+TGG - chr8_1:75408943-75408962 None:intergenic 30.0%
! TTTTGTGATTTGAGAGAAGA+TGG + chr8_1:75409240-75409259 Msa1214690:intron 30.0%
!!! GTTATTTTATGGTGGATTCT+AGG - chr8_1:75409430-75409449 None:intergenic 30.0%
TCTCTCATCTAAAGAAAAGA+AGG + chr8_1:75409847-75409866 Msa1214690:intron 30.0%
ATCTAAAGAAAAGAAGGATG+TGG + chr8_1:75409853-75409872 Msa1214690:intron 30.0%
ACGAAAGTAATGTTAGCTAT+GGG + chr8_1:75410081-75410100 Msa1214690:intron 30.0%
! ATTGTATATTTTATTGCCCC+CGG - chr8_1:75410133-75410152 None:intergenic 30.0%
!!! AGCAATTTTTTTCCCTTTTG+GGG + chr8_1:75410395-75410414 Msa1214690:intron 30.0%
GGATTCATGTATATCATCAA+GGG - chr8_1:75410430-75410449 None:intergenic 30.0%
!! CTGTTGTTGTTTAAGTACTT+AGG + chr8_1:75410588-75410607 Msa1214690:intron 30.0%
!! TACCCAAGAAATAACTTGTT+GGG + chr8_1:75410637-75410656 Msa1214690:intron 30.0%
AGTCATATACCCAAATTACT+TGG + chr8_1:75410667-75410686 Msa1214690:intron 30.0%
TAACTTAGGCCAAGTAATTT+GGG - chr8_1:75410679-75410698 None:intergenic 30.0%
TTAACTTAGGCCAAGTAATT+TGG - chr8_1:75410680-75410699 None:intergenic 30.0%
ATTACTTGGCCTAAGTTAAA+CGG + chr8_1:75410681-75410700 Msa1214690:intron 30.0%
!! CTTTTAAGTGTTTTCAAGCA+TGG + chr8_1:75410907-75410926 Msa1214690:intron 30.0%
! TCTTTTATTCAACTGTCACT+AGG + chr8_1:75411203-75411222 Msa1214690:intron 30.0%
TTCGGTAAAATGTATGATGT+CGG + chr8_1:75411254-75411273 Msa1214690:intron 30.0%
TAAAATGTATGATGTCGGAA+TGG + chr8_1:75411259-75411278 Msa1214690:intron 30.0%
AAAATGTATGATGTCGGAAT+GGG + chr8_1:75411260-75411279 Msa1214690:intron 30.0%
! GAAGCAATTGTGTTTTATCA+CGG + chr8_1:75411296-75411315 Msa1214690:intron 30.0%
TCATGTCCAACAAGTATAAT+GGG + chr8_1:75411745-75411764 Msa1214690:intron 30.0%
TCACCTTGTTAGAATTCATT+AGG + chr8_1:75411779-75411798 Msa1214690:intron 30.0%
CACCTTGTTAGAATTCATTA+GGG + chr8_1:75411780-75411799 Msa1214690:intron 30.0%
GAATAAAAGAGAGAACAAAG+AGG + chr8_1:75411848-75411867 Msa1214690:intron 30.0%
AATTCTAATTTACTGTCACG+AGG - chr8_1:75411874-75411893 None:intergenic 30.0%
TATTATCCATTCGTGAGAAA+AGG - chr8_1:75412080-75412099 None:intergenic 30.0%
TTGATTAAAAGCTTCGACTT+TGG + chr8_1:75412192-75412211 Msa1214690:intron 30.0%
TTAAAATCAATTCAGGTCTG+TGG + chr8_1:75412439-75412458 Msa1214690:intron 30.0%
TCTATTCTGTCTAAGAAGTA+GGG + chr8_1:75412587-75412606 Msa1214690:CDS 30.0%
TTAGTCAATCATACTGGATT+TGG + chr8_1:75412644-75412663 Msa1214690:three_prime_UTR 30.0%
TAGTCAATCATACTGGATTT+GGG + chr8_1:75412645-75412664 Msa1214690:three_prime_UTR 30.0%
CGCAAAACAAAACAAGTATA+AGG - chr8_1:75412715-75412734 None:intergenic 30.0%
!! CTTTTGTTTCTTCGTCAATA+TGG + chr8_1:75412761-75412780 Msa1214690:three_prime_UTR 30.0%
CATTATGTTTCAATGTTCAC+TGG + chr8_1:75412806-75412825 Msa1214690:three_prime_UTR 30.0%
TTATAAGGTTTAATGGAGGT+GGG - chr8_1:75412857-75412876 None:intergenic 30.0%
! GTGATCTGATTTGTATGATA+TGG + chr8_1:75412991-75413010 Msa1214690:three_prime_UTR 30.0%
GATGAGATTCTAATCCCAAA+AGG + chr8_1:75407716-75407735 Msa1214690:five_prime_UTR 35.0%
TTTGAAGAAAGGAAAACCTG+TGG - chr8_1:75407883-75407902 None:intergenic 35.0%
! CCTTGTCTTTGTTTATGCTT+AGG - chr8_1:75408125-75408144 None:intergenic 35.0%
CCTAAGCATAAACAAAGACA+AGG + chr8_1:75408122-75408141 Msa1214690:CDS 35.0%
TAGTTTAGATTCAAGCCGAT+AGG + chr8_1:75408255-75408274 Msa1214690:intron 35.0%
TACACATGGCAAATGGAATT+TGG - chr8_1:75408435-75408454 None:intergenic 35.0%
TGGTGAATTAGTTGTTGAAC+TGG + chr8_1:75408601-75408620 Msa1214690:intron 35.0%
! AGAAAAGGCATAATCATGTG+TGG - chr8_1:75408739-75408758 None:intergenic 35.0%
AGAGTGAGTGGTATTGTAAA+GGG - chr8_1:75408766-75408785 None:intergenic 35.0%
TCCTCCCCTATTAAAAATGT+CGG + chr8_1:75408872-75408891 Msa1214690:intron 35.0%
GTCGGAAACAACCATAATAA+AGG + chr8_1:75408890-75408909 Msa1214690:intron 35.0%
CAACCATAATAAAGGTTAGC+AGG + chr8_1:75408898-75408917 Msa1214690:intron 35.0%
AAAAGAAGAAGCCTACAAGA+CGG + chr8_1:75409063-75409082 Msa1214690:intron 35.0%
TCTTTAGTCACAAATCACAC+TGG - chr8_1:75409328-75409347 None:intergenic 35.0%
CATCTAACGGCCAATTTAAA+TGG + chr8_1:75409372-75409391 Msa1214690:intron 35.0%
CCTAGATATGTGCTTAGATA+GGG - chr8_1:75409579-75409598 None:intergenic 35.0%
CCTATCTAAGCACATATCTA+GGG + chr8_1:75409577-75409596 Msa1214690:intron 35.0%
CAAGACCTAATTGAAATGCA+TGG + chr8_1:75409623-75409642 Msa1214690:intron 35.0%
ACACTCCATGCATTTCAATT+AGG - chr8_1:75409631-75409650 None:intergenic 35.0%
TGAATCATTAGACTACAGAC+AGG + chr8_1:75409693-75409712 Msa1214690:intron 35.0%
ATTAGACTACAGACAGGTAA+GGG + chr8_1:75409699-75409718 Msa1214690:intron 35.0%
AAATTGGCAGCATGGTATTA+TGG + chr8_1:75409746-75409765 Msa1214690:intron 35.0%
AATTGGCAGCATGGTATTAT+GGG + chr8_1:75409747-75409766 Msa1214690:intron 35.0%
GATGATGAGAAGTTAATGCA+GGG + chr8_1:75410014-75410033 Msa1214690:intron 35.0%
ATGATGAGAAGTTAATGCAG+GGG + chr8_1:75410015-75410034 Msa1214690:intron 35.0%
GACGAAAGTAATGTTAGCTA+TGG + chr8_1:75410080-75410099 Msa1214690:intron 35.0%
! GGTCCAGAAATATTTGTTAC+CGG + chr8_1:75410111-75410130 Msa1214690:intron 35.0%
! GTCCAGAAATATTTGTTACC+GGG + chr8_1:75410112-75410131 Msa1214690:intron 35.0%
! TCCAGAAATATTTGTTACCG+GGG + chr8_1:75410113-75410132 Msa1214690:intron 35.0%
!!! GCAATTTTTTTCCCTTTTGG+GGG + chr8_1:75410396-75410415 Msa1214690:intron 35.0%
CGGATTCATGTATATCATCA+AGG - chr8_1:75410431-75410450 None:intergenic 35.0%
ATACAAGTAGGAAGAAGTAG+TGG + chr8_1:75410496-75410515 Msa1214690:intron 35.0%
TACAAGTAGGAAGAAGTAGT+GGG + chr8_1:75410497-75410516 Msa1214690:intron 35.0%
! GTACCCAAGAAATAACTTGT+TGG + chr8_1:75410636-75410655 Msa1214690:intron 35.0%
!! CACCCAACAAGTTATTTCTT+GGG - chr8_1:75410642-75410661 None:intergenic 35.0%
! TCAGCTATACCGTTTAACTT+AGG - chr8_1:75410693-75410712 None:intergenic 35.0%
TAGGTTCTACTTTATACGGT+TGG - chr8_1:75410742-75410761 None:intergenic 35.0%
GACTATACAGCTTAAACTTG+AGG - chr8_1:75410834-75410853 None:intergenic 35.0%
! CATAGGGAGTTTAAAGCTTT+AGG + chr8_1:75411152-75411171 Msa1214690:intron 35.0%
ATTAAAAGAGAAGGTAGGAC+TGG - chr8_1:75411342-75411361 None:intergenic 35.0%
GCATGATTAAAAGAGAAGGT+AGG - chr8_1:75411347-75411366 None:intergenic 35.0%
! GAAGGCATGATTAAAAGAGA+AGG - chr8_1:75411351-75411370 None:intergenic 35.0%
AGAAAAAATACACTGAGGAG+AGG + chr8_1:75411468-75411487 Msa1214690:intron 35.0%
GTAGAAGAAGAGATAGTAGA+AGG + chr8_1:75411566-75411585 Msa1214690:intron 35.0%
AGGAATACAAAGAGTCACTT+TGG + chr8_1:75411586-75411605 Msa1214690:intron 35.0%
! GGAATACAAAGAGTCACTTT+GGG + chr8_1:75411587-75411606 Msa1214690:intron 35.0%
CTCATGTCCAACAAGTATAA+TGG + chr8_1:75411744-75411763 Msa1214690:intron 35.0%
CACCCTAATGAATTCTAACA+AGG - chr8_1:75411785-75411804 None:intergenic 35.0%
AGCAGCAAGGTAGTAAAATT+AGG + chr8_1:75411815-75411834 Msa1214690:intron 35.0%
AGCAGCAAGGTAGTAAAATT+AGG + chr8_1:75411815-75411834 Msa1214690:intron 35.0%
GAATAAGGGAGAAAACAAAG+AGG + chr8_1:75411947-75411966 Msa1214690:intron 35.0%
TCAAAGACTCTATAAGCTAG+TGG + chr8_1:75412236-75412255 Msa1214690:intron 35.0%
TGGCTTCTATAATTCCTCAA+AGG + chr8_1:75412522-75412541 Msa1214690:CDS 35.0%
CTACTTCTTAGACAGAATAG+AGG - chr8_1:75412588-75412607 None:intergenic 35.0%
CTCTATTCTGTCTAAGAAGT+AGG + chr8_1:75412586-75412605 Msa1214690:CDS 35.0%
AGAGTGAGGCATATCAAATA+CGG - chr8_1:75412738-75412757 None:intergenic 35.0%
TATTTGATATGCCTCACTCT+TGG + chr8_1:75412738-75412757 Msa1214690:three_prime_UTR 35.0%
GTTATAAGGTTTAATGGAGG+TGG - chr8_1:75412858-75412877 None:intergenic 35.0%
CGAGTTATAAGGTTTAATGG+AGG - chr8_1:75412861-75412880 None:intergenic 35.0%
GCACGAGTTATAAGGTTTAA+TGG - chr8_1:75412864-75412883 None:intergenic 35.0%
CATCATTAGCACGAGTTATA+AGG - chr8_1:75412872-75412891 None:intergenic 35.0%
ATACAGAAACAGAGACTTGT+TGG + chr8_1:75413040-75413059 Msa1214690:three_prime_UTR 35.0%
GGCCTCTTCAAAAAATGAAC+TGG - chr8_1:75407748-75407767 None:intergenic 40.0%
TGATGATACAACGGCAAGAA+GGG - chr8_1:75407778-75407797 None:intergenic 40.0%
!! GCTGGTTTGTGATGATACAA+CGG - chr8_1:75407787-75407806 None:intergenic 40.0%
TGTAGGACCATTAAGCGTAA+AGG + chr8_1:75408071-75408090 Msa1214690:CDS 40.0%
AACTCGTCCTTTACGCTTAA+TGG - chr8_1:75408081-75408100 None:intergenic 40.0%
CAACACTTCATATCGAAGTC+AGG - chr8_1:75408379-75408398 None:intergenic 40.0%
CTGACTTCGATATGAAGTGT+TGG + chr8_1:75408377-75408396 Msa1214690:intron 40.0%
ACATGGCAAATGGAATTTGG+TGG - chr8_1:75408432-75408451 None:intergenic 40.0%
AAGTGTGTACACATGGCAAA+TGG - chr8_1:75408442-75408461 None:intergenic 40.0%
TTCACACAAGTGTGTACACA+TGG - chr8_1:75408449-75408468 None:intergenic 40.0%
CACACTTGTGTGAATGCTAT+TGG + chr8_1:75408455-75408474 Msa1214690:intron 40.0%
GATAGTAGATAAACTAGCCC+TGG + chr8_1:75408510-75408529 Msa1214690:intron 40.0%
CATCTAACGGCCAATTTAAG+TGG - chr8_1:75408684-75408703 None:intergenic 40.0%
ATTGTAAAGGGGGAGAGAAA+AGG - chr8_1:75408754-75408773 None:intergenic 40.0%
AGTGAGTGGTATTGTAAAGG+GGG - chr8_1:75408764-75408783 None:intergenic 40.0%
GAGTGAGTGGTATTGTAAAG+GGG - chr8_1:75408765-75408784 None:intergenic 40.0%
GAGAGTGAGTGGTATTGTAA+AGG - chr8_1:75408767-75408786 None:intergenic 40.0%
! TCCGACATTTTTAATAGGGG+AGG - chr8_1:75408876-75408895 None:intergenic 40.0%
AGCCCTGCTAACCTTTATTA+TGG - chr8_1:75408904-75408923 None:intergenic 40.0%
!! GATGTGAAGTTTTGTGACCA+TGG - chr8_1:75408965-75408984 None:intergenic 40.0%
! CGAGTAATGGAAGATAAGAG+TGG + chr8_1:75409087-75409106 Msa1214690:intron 40.0%
TTTGAGAGAAGATGGTGAGT+TGG + chr8_1:75409248-75409267 Msa1214690:intron 40.0%
! AGAAGATGGTGAGTTGGAAT+CGG + chr8_1:75409254-75409273 Msa1214690:intron 40.0%
GAGAGAAATGGAGAGAGAAA+AGG + chr8_1:75409296-75409315 Msa1214690:intron 40.0%
! AAGGTGAAGCACTACCATAA+AGG - chr8_1:75409556-75409575 None:intergenic 40.0%
GATATGTGCTTAGATAGGGA+AGG - chr8_1:75409575-75409594 None:intergenic 40.0%
CCCTATCTAAGCACATATCT+AGG + chr8_1:75409576-75409595 Msa1214690:intron 40.0%
CCCTAGATATGTGCTTAGAT+AGG - chr8_1:75409580-75409599 None:intergenic 40.0%
! GCACATATCTAGGGAAGTTT+TGG + chr8_1:75409586-75409605 Msa1214690:intron 40.0%
!! CATATCTAGGGAAGTTTTGG+TGG + chr8_1:75409589-75409608 Msa1214690:intron 40.0%
CATTAGACTACAGACAGGTA+AGG + chr8_1:75409698-75409717 Msa1214690:intron 40.0%
AATACCATGCTGCCAATTTG+CGG - chr8_1:75409745-75409764 None:intergenic 40.0%
! TATTCGCAGACATGGTTTTC+TGG + chr8_1:75409946-75409965 Msa1214690:intron 40.0%
!! TTTTCTGGTAGACCAGATTC+TGG + chr8_1:75409961-75409980 Msa1214690:intron 40.0%
! AATTGCTGGCTAGGTTACAT+TGG + chr8_1:75409992-75410011 Msa1214690:intron 40.0%
GGATGATGAGAAGTTAATGC+AGG + chr8_1:75410013-75410032 Msa1214690:intron 40.0%
TTGTTGTCAAAGCCGAAATG+GGG - chr8_1:75410047-75410066 None:intergenic 40.0%
! CTTGTTGTCAAAGCCGAAAT+GGG - chr8_1:75410048-75410067 None:intergenic 40.0%
AGTAATGTTAGCTATGGGAG+TGG + chr8_1:75410086-75410105 Msa1214690:intron 40.0%
! CCAGAAATATTTGTTACCGG+GGG + chr8_1:75410114-75410133 Msa1214690:intron 40.0%
TCTTGATGGGGTATACAAGT+AGG + chr8_1:75410484-75410503 Msa1214690:intron 40.0%
TCAGCTAGTTAATACAGTCC+AGG + chr8_1:75410527-75410546 Msa1214690:intron 40.0%
CAGCTAGTTAATACAGTCCA+GGG + chr8_1:75410528-75410547 Msa1214690:intron 40.0%
!! GCACCCAACAAGTTATTTCT+TGG - chr8_1:75410643-75410662 None:intergenic 40.0%
!! CGGTTGGCTTAATTGTTACT+TGG - chr8_1:75410726-75410745 None:intergenic 40.0%
!!! GTTTTGTCACTTTCGAACGT+TGG - chr8_1:75410881-75410900 None:intergenic 40.0%
!! GTTTTCAAGCATGGTATACC+AGG + chr8_1:75410916-75410935 Msa1214690:intron 40.0%
CCTCAAACACTAAAACAACC+TGG - chr8_1:75410937-75410956 None:intergenic 40.0%
!!! CCAGGTTGTTTTAGTGTTTG+AGG + chr8_1:75410934-75410953 Msa1214690:intron 40.0%
!!! TGTTTTAGTGTTTGAGGCAG+AGG + chr8_1:75410940-75410959 Msa1214690:intron 40.0%
!! GGAGTTTAAAGCTTTAGGCA+TGG + chr8_1:75411157-75411176 Msa1214690:intron 40.0%
GACTGGAAAGTGGAAATGAA+TGG - chr8_1:75411325-75411344 None:intergenic 40.0%
TTTAATCATGCCTTCAGTCG+TGG + chr8_1:75411356-75411375 Msa1214690:intron 40.0%
TAAGAAAGGGGAGGAACTTA+CGG - chr8_1:75411387-75411406 None:intergenic 40.0%
TGAGTTAGATAAGAAAGGGG+AGG - chr8_1:75411396-75411415 None:intergenic 40.0%
GATGTCTCCCTGTCAAATTA+AGG - chr8_1:75411623-75411642 None:intergenic 40.0%
ATGACATAGTGAGACACAAG+TGG + chr8_1:75411691-75411710 Msa1214690:intron 40.0%
GACATGAGTACCCAATTAGT+TGG - chr8_1:75411732-75411751 None:intergenic 40.0%
TTCTAACAAGGTGAGCTCTA+GGG - chr8_1:75411773-75411792 None:intergenic 40.0%
ATTCTAACAAGGTGAGCTCT+AGG - chr8_1:75411774-75411793 None:intergenic 40.0%
TTACTACCTTGCTGCTATGA+CGG - chr8_1:75411811-75411830 None:intergenic 40.0%
AGAATTCATTAGGGTGTAGC+TGG + chr8_1:75411789-75411808 Msa1214690:intron 40.0%
AACTGTTCTTCAGCGAGATA+AGG + chr8_1:75412029-75412048 Msa1214690:intron 40.0%
GAGATAAGGAGATTCTCCTT+TGG + chr8_1:75412043-75412062 Msa1214690:intron 40.0%
TAAGGAGATTCTCCTTTGGA+AGG + chr8_1:75412047-75412066 Msa1214690:intron 40.0%
TTGCCAACGTCATAGTTGAT+TGG + chr8_1:75412266-75412285 Msa1214690:intron 40.0%
! GGCGTCAATTTTCTTCTACT+TGG + chr8_1:75412287-75412306 Msa1214690:intron 40.0%
! GAAACGAGTAGAGCATCATT+TGG - chr8_1:75412365-75412384 None:intergenic 40.0%
! CGCACTGAATTCTAGTTATG+TGG + chr8_1:75412405-75412424 Msa1214690:intron 40.0%
CACAGCTTGTCTATGTTGTA+TGG + chr8_1:75412545-75412564 Msa1214690:CDS 40.0%
GCTTGTCTATGTTGTATGGA+TGG + chr8_1:75412549-75412568 Msa1214690:CDS 40.0%
ATGTTGTATGGATGGAGAGT+TGG + chr8_1:75412557-75412576 Msa1214690:CDS 40.0%
AGAAACAAAAGCCAAGAGTG+AGG - chr8_1:75412752-75412771 None:intergenic 40.0%
TCGTCAATATGGTCAACAGA+AGG + chr8_1:75412772-75412791 Msa1214690:three_prime_UTR 40.0%
TTCAATGTTCACTGGATCAG+TGG + chr8_1:75412814-75412833 Msa1214690:three_prime_UTR 40.0%
TCAATGTTCACTGGATCAGT+GGG + chr8_1:75412815-75412834 Msa1214690:three_prime_UTR 40.0%
ATCAGTGGGGCACAATTAAT+AGG + chr8_1:75412829-75412848 Msa1214690:three_prime_UTR 40.0%
!! AGAAACAGAGACTTGTTGGT+AGG + chr8_1:75413044-75413063 Msa1214690:three_prime_UTR 40.0%
CAGGTCACACAATTCATGTT+AGG - chr8_1:75413076-75413095 None:intergenic 40.0%
!! TGAACTGGATTGGGCCTTTT+GGG - chr8_1:75407733-75407752 None:intergenic 45.0%
!! ATGAACTGGATTGGGCCTTT+TGG - chr8_1:75407734-75407753 None:intergenic 45.0%
AACGGCAAGAAGGGTAAAAC+GGG - chr8_1:75407769-75407788 None:intergenic 45.0%
CAACGGCAAGAAGGGTAAAA+CGG - chr8_1:75407770-75407789 None:intergenic 45.0%
GTGATGATACAACGGCAAGA+AGG - chr8_1:75407779-75407798 None:intergenic 45.0%
TTTCTACGACGACGAAATCC+GGG - chr8_1:75407838-75407857 None:intergenic 45.0%
GTTTCTACGACGACGAAATC+CGG - chr8_1:75407839-75407858 None:intergenic 45.0%
!! AAACCTGTGGATGCTGTTTC+TGG - chr8_1:75407870-75407889 None:intergenic 45.0%
AAAACATACGGCTGATGCGA+CGG - chr8_1:75408173-75408192 None:intergenic 45.0%
AGTAGATAAACTAGCCCTGG+TGG + chr8_1:75408513-75408532 Msa1214690:intron 45.0%
TTTAAGTGGTACACGGGTGA+GGG - chr8_1:75408670-75408689 None:intergenic 45.0%
ATTTAAGTGGTACACGGGTG+AGG - chr8_1:75408671-75408690 None:intergenic 45.0%
CACCCGTGTACCACTTAAAT+TGG + chr8_1:75408671-75408690 Msa1214690:intron 45.0%
GGCCAATTTAAGTGGTACAC+GGG - chr8_1:75408676-75408695 None:intergenic 45.0%
CGGCCAATTTAAGTGGTACA+CGG - chr8_1:75408677-75408696 None:intergenic 45.0%
AATACCACTCACTCTCTCTG+CGG + chr8_1:75408771-75408790 Msa1214690:intron 45.0%
! GGTTTGGAGTGTGAGAGAAA+TGG + chr8_1:75409284-75409303 Msa1214690:intron 45.0%
CGGCCAATTTAAATGGTCCA+CGG + chr8_1:75409379-75409398 Msa1214690:intron 45.0%
GGCCAATTTAAATGGTCCAC+GGG + chr8_1:75409380-75409399 Msa1214690:intron 45.0%
CACCCGTGGACCATTTAAAT+TGG - chr8_1:75409385-75409404 None:intergenic 45.0%
ATTTAAATGGTCCACGGGTG+AGG + chr8_1:75409385-75409404 Msa1214690:intron 45.0%
TTTAAATGGTCCACGGGTGA+GGG + chr8_1:75409386-75409405 Msa1214690:intron 45.0%
!! TATGGTGGATTCTAGGGTGA+GGG - chr8_1:75409423-75409442 None:intergenic 45.0%
!! TTATGGTGGATTCTAGGGTG+AGG - chr8_1:75409424-75409443 None:intergenic 45.0%
AGAAGTTATCATGGGCAGCA+TGG + chr8_1:75409498-75409517 Msa1214690:intron 45.0%
AAGGCATAAACCACCTCGAA+TGG - chr8_1:75409537-75409556 None:intergenic 45.0%
CGAGGTGGTTTATGCCTTTA+TGG + chr8_1:75409539-75409558 Msa1214690:intron 45.0%
CAGTCAACAGTCTAGCTAAC+GGG - chr8_1:75409919-75409938 None:intergenic 45.0%
GCAGTCAACAGTCTAGCTAA+CGG - chr8_1:75409920-75409939 None:intergenic 45.0%
ACCATGTCTGCGAATAGATC+TGG - chr8_1:75409942-75409961 None:intergenic 45.0%
AATTCCACTGAGCCAGAATC+TGG - chr8_1:75409976-75409995 None:intergenic 45.0%
! CCTTGTTGTCAAAGCCGAAA+TGG - chr8_1:75410049-75410068 None:intergenic 45.0%
! CCATTTCGGCTTTGACAACA+AGG + chr8_1:75410046-75410065 Msa1214690:intron 45.0%
! TTTCGGCTTTGACAACAAGG+TGG + chr8_1:75410049-75410068 Msa1214690:intron 45.0%
AATGTTAGCTATGGGAGTGG+CGG + chr8_1:75410089-75410108 Msa1214690:intron 45.0%
CCCCCGGTAACAAATATTTC+TGG - chr8_1:75410117-75410136 None:intergenic 45.0%
GATATACATGAATCCGCTCC+TGG + chr8_1:75410435-75410454 Msa1214690:intron 45.0%
TCATGAGGGGAGATCTTGAT+GGG + chr8_1:75410471-75410490 Msa1214690:intron 45.0%
! TAGGAAGAAGTAGTGGGAAG+TGG + chr8_1:75410503-75410522 Msa1214690:intron 45.0%
! TCACTAGGAGTCTTGACTTG+TGG + chr8_1:75411218-75411237 Msa1214690:intron 45.0%
!! CACTAGGAGTCTTGACTTGT+GGG + chr8_1:75411219-75411238 Msa1214690:intron 45.0%
TGTGGGATTCTGTCTGTCTT+CGG + chr8_1:75411236-75411255 Msa1214690:intron 45.0%
! AGGGTGCCCATTATACTTGT+TGG - chr8_1:75411754-75411773 None:intergenic 45.0%
!! GGAGAAAACAAAGAGGCATC+AGG + chr8_1:75411954-75411973 Msa1214690:intron 45.0%
ACGCCAATCAACTATGACGT+TGG - chr8_1:75412272-75412291 None:intergenic 45.0%
CCTGTTCGTGAAGTATGGAT+TGG - chr8_1:75412500-75412519 None:intergenic 45.0%
CCAATCCATACTTCACGAAC+AGG + chr8_1:75412497-75412516 Msa1214690:CDS 45.0%
ATAGACAAGCTGTGCCTTTG+AGG - chr8_1:75412539-75412558 None:intergenic 45.0%
TCTTAGACAGAATAGAGGCC+AGG - chr8_1:75412583-75412602 None:intergenic 45.0%
CAATGTTCACTGGATCAGTG+GGG + chr8_1:75412816-75412835 Msa1214690:three_prime_UTR 45.0%
!! ATCTCGCTTTTCTGTGCTCT+CGG + chr8_1:75412923-75412942 Msa1214690:three_prime_UTR 45.0%
TCACCTACAACTCCACTTCC+CGG + chr8_1:75407817-75407836 Msa1214690:five_prime_UTR 50.0%
AATCCGGGAAGTGGAGTTGT+AGG - chr8_1:75407823-75407842 None:intergenic 50.0%
CGCATGTGTCAGTGTCATGT+CGG + chr8_1:75408350-75408369 Msa1214690:intron 50.0%
!! TATCGGTGGATTCTAGGGTG+AGG + chr8_1:75408632-75408651 Msa1214690:intron 50.0%
!! ATCGGTGGATTCTAGGGTGA+GGG + chr8_1:75408633-75408652 Msa1214690:intron 50.0%
CCATTACTCGTCCGTCTTGT+AGG - chr8_1:75409077-75409096 None:intergenic 50.0%
CCTACAAGACGGACGAGTAA+TGG + chr8_1:75409074-75409093 Msa1214690:intron 50.0%
! AGATGGTGAGTTGGAATCGG+TGG + chr8_1:75409257-75409276 Msa1214690:intron 50.0%
TCTATTAAGTCCCTCACCCG+TGG - chr8_1:75408657-75408676 None:intergenic 50.0%
TGTACACTGTCCACCATTCG+AGG + chr8_1:75409521-75409540 Msa1214690:intron 50.0%
GCATAAACCACCTCGAATGG+TGG - chr8_1:75409534-75409553 None:intergenic 50.0%
TTGACCGCAAATTGGCAGCA+TGG + chr8_1:75409738-75409757 Msa1214690:intron 50.0%
AAAGAAGGATGTGGCGTACG+AGG + chr8_1:75409862-75409881 Msa1214690:intron 50.0%
GCCAGATCTATTCGCAGACA+TGG + chr8_1:75409938-75409957 Msa1214690:intron 50.0%
!! TAGACCAGATTCTGGCTCAG+TGG + chr8_1:75409969-75409988 Msa1214690:intron 50.0%
!! TTCTGGCTCAGTGGAATTGC+TGG + chr8_1:75409978-75409997 Msa1214690:intron 50.0%
ATGTTAGCTATGGGAGTGGC+GGG + chr8_1:75410090-75410109 Msa1214690:intron 50.0%
!! TTTTCCCTTTTGGGGGCTAG+AGG + chr8_1:75410403-75410422 Msa1214690:intron 50.0%
GTCATGAGGGGAGATCTTGA+TGG + chr8_1:75410470-75410489 Msa1214690:intron 50.0%
CATGAGGGGAGATCTTGATG+GGG + chr8_1:75410472-75410491 Msa1214690:intron 50.0%
! TTGTTGTTCGTGAAACGCCC+TGG - chr8_1:75410548-75410567 None:intergenic 50.0%
GAGAAGGTAGGACTGGAAAG+TGG - chr8_1:75411335-75411354 None:intergenic 50.0%
TACGGAAAGACCACGACTGA+AGG - chr8_1:75411369-75411388 None:intergenic 50.0%
! GATTCTCCTTTGGAAGGTCG+TGG + chr8_1:75412053-75412072 Msa1214690:intron 50.0%
AAAGGTCCACGACCTTCCAA+AGG - chr8_1:75412062-75412081 None:intergenic 50.0%
! CGTGGACCTTTTCTCACGAA+TGG + chr8_1:75412071-75412090 Msa1214690:intron 50.0%
!! AAGTTCAAGTTGTGCTGCGC+AGG + chr8_1:75412466-75412485 Msa1214690:CDS 50.0%
CCAGACCTGTTCGTGAAGTA+TGG - chr8_1:75412505-75412524 None:intergenic 50.0%
CCATACTTCACGAACAGGTC+TGG + chr8_1:75412502-75412521 Msa1214690:CDS 50.0%
CAACGAAGAGAGAGAGCTAG+AGG - chr8_1:75412671-75412690 None:intergenic 50.0%
GTAGGTGAGGCGAATTCAGC+TGG - chr8_1:75407805-75407824 None:intergenic 55.0%
GGGAAGTGGAGTTGTAGGTG+AGG - chr8_1:75407818-75407837 None:intergenic 55.0%
!! CCTGTGGATGCTGTTTCTGG+CGG - chr8_1:75407867-75407886 None:intergenic 55.0%
GGGGAGGAATACGGTGAAAG+AGG - chr8_1:75408860-75408879 None:intergenic 55.0%
! TGGTGAGTTGGAATCGGTGG+TGG + chr8_1:75409260-75409279 Msa1214690:intron 55.0%
! TGAGTTGGAATCGGTGGTGG+TGG + chr8_1:75409263-75409282 Msa1214690:intron 55.0%
!! TGGAATCGGTGGTGGTGGTT+TGG + chr8_1:75409268-75409287 Msa1214690:intron 55.0%
ACACTGTCCACCATTCGAGG+TGG + chr8_1:75409524-75409543 Msa1214690:intron 55.0%
ACAGGTAAGGGTCAGTGCGA+GGG + chr8_1:75409711-75409730 Msa1214690:intron 55.0%
! AGGGCAGGTTGACCGCAAAT+TGG + chr8_1:75409730-75409749 Msa1214690:intron 55.0%
! GCTCAGTGGAATTGCTGGCT+AGG + chr8_1:75409983-75410002 Msa1214690:intron 55.0%
CAGGGGCAGTTTCCCCATTT+CGG + chr8_1:75410032-75410051 Msa1214690:intron 55.0%
CATGAATCCGCTCCTGGCTA+TGG + chr8_1:75410441-75410460 Msa1214690:intron 55.0%
GCTATGGCCAGCAGTCATGA+GGG + chr8_1:75410457-75410476 Msa1214690:intron 55.0%
CTATGGCCAGCAGTCATGAG+GGG + chr8_1:75410458-75410477 Msa1214690:intron 55.0%
AGATCTCCCCTCATGACTGC+TGG - chr8_1:75410467-75410486 None:intergenic 55.0%
GTGTAGCCGTCATAGCAGCA+AGG + chr8_1:75411802-75411821 Msa1214690:intron 55.0%
GTGTAGCTGGCAAAGCAGCA+AGG + chr8_1:75411901-75411920 Msa1214690:intron 55.0%
GTATGGATGGAGAGTTGGCC+TGG + chr8_1:75412562-75412581 Msa1214690:CDS 55.0%
GCATCACTCTCAGTCACGTG+TGG + chr8_1:75412948-75412967 Msa1214690:three_prime_UTR 55.0%
CGACGACGAAATCCGGGAAG+TGG - chr8_1:75407832-75407851 None:intergenic 60.0%
CCGCCAGAAACAGCATCCAC+AGG + chr8_1:75407864-75407883 Msa1214690:five_prime_UTR 60.0%
GACAGGTAAGGGTCAGTGCG+AGG + chr8_1:75409710-75409729 Msa1214690:intron 60.0%
GAAGGATGTGGCGTACGAGG+AGG + chr8_1:75409865-75409884 Msa1214690:intron 60.0%
! GCTAACGGGTGCGAGTCAGT+AGG - chr8_1:75409905-75409924 None:intergenic 60.0%
GGGACCTCTAGCCCCCAAAA+GGG - chr8_1:75410410-75410429 None:intergenic 60.0%
AGGGACCTCTAGCCCCCAAA+AGG - chr8_1:75410411-75410430 None:intergenic 60.0%
CATGACTGCTGGCCATAGCC+AGG - chr8_1:75410456-75410475 None:intergenic 60.0%
GGCTATGGCCAGCAGTCATG+AGG + chr8_1:75410456-75410475 Msa1214690:intron 60.0%
GCAGCCGCAGAGAGAGTGAG+TGG - chr8_1:75408778-75408797 None:intergenic 65.0%
GTAAGGGTCAGTGCGAGGGC+AGG + chr8_1:75409715-75409734 Msa1214690:intron 65.0%
GGATGTGGCGTACGAGGAGG+TGG + chr8_1:75409868-75409887 Msa1214690:intron 65.0%
CTGCTGGCCATAGCCAGGAG+CGG - chr8_1:75410451-75410470 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 75407694 75413096 75407694 ID=Msa1214690;Name=Msa1214690
chr8_1 mRNA 75407694 75413096 75407694 ID=Msa1214690-mRNA-1;Parent=Msa1214690;Name=Msa1214690-mRNA-1;_AED=0.13;_eAED=0.13;_QI=197|1|1|1|0|0|3|489|101
chr8_1 exon 75407694 75407885 75407694 ID=Msa1214690-mRNA-1:exon:25922;Parent=Msa1214690-mRNA-1
chr8_1 exon 75408027 75408183 75408027 ID=Msa1214690-mRNA-1:exon:25923;Parent=Msa1214690-mRNA-1
chr8_1 exon 75412454 75413096 75412454 ID=Msa1214690-mRNA-1:exon:25924;Parent=Msa1214690-mRNA-1
chr8_1 five_prime_UTR 75407694 75407885 75407694 ID=Msa1214690-mRNA-1:five_prime_utr;Parent=Msa1214690-mRNA-1
chr8_1 five_prime_UTR 75408027 75408031 75408027 ID=Msa1214690-mRNA-1:five_prime_utr;Parent=Msa1214690-mRNA-1
chr8_1 CDS 75408032 75408183 75408032 ID=Msa1214690-mRNA-1:cds;Parent=Msa1214690-mRNA-1
chr8_1 CDS 75412454 75412607 75412454 ID=Msa1214690-mRNA-1:cds;Parent=Msa1214690-mRNA-1
chr8_1 three_prime_UTR 75412608 75413096 75412608 ID=Msa1214690-mRNA-1:three_prime_utr;Parent=Msa1214690-mRNA-1
Gene Sequence

>Msa1214690

ATGAAGGTGCGTTCATCTGTGAAGAAAATGTGTGAGTATTGTAGGACCATTAAGCGTAAAGGACGAGTTTATATCATGTGTACTGCTAACCCTAAGCATAAACAAAGACAAGGCATGTCAACTTTTGCATATGAAGCTCCGTCGCATCAGCCGTCTGTGGAGATAAGTTCAAGTTGTGCTGCGCAGGAGATTAAGCCAATCCATACTTCACGAACAGGTCTGGCTTCTATAATTCCTCAAAGGCACAGCTTGTCTATGTTGTATGGATGGAGAGTTGGCCTGGCCTCTATTCTGTCTAAGAAGTAG
Protein sequence

>Msa1214690

MKVRSSVKKMCEYCRTIKRKGRVYIMCTANPKHKQRQGMSTFAYEAPSHQPSVEISSSCAAQEIKPIHTSRTGLASIIPQRHSLSMLYGWRVGLASILSKK*