AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0648370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648370 MtrunA17_Chr4g0039761 97.143 105 3 0 1 105 1 105 3.84e-75 217
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648370 AT3G03070.1 67.257 113 26 2 1 105 1 110 2.13e-52 160

Find 64 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGATTTGCGATTGAATTT+AGG 0.189300 4_3:+54855095 Msa0648370:five_prime_UTR
CAATGAAGTGCCACCTATTA+AGG 0.217254 4_3:+54856711 Msa0648370:CDS
TTGATTTGCGATTGAATTTA+GGG 0.237223 4_3:+54855096 Msa0648370:five_prime_UTR
TTTATTGAATTTCGCTAGAT+TGG 0.288931 4_3:-54855022 None:intergenic
ATTTGTTACATCATATGATT+TGG 0.333760 4_3:-54857106 None:intergenic
TCGCTAGATTGGGGAGGTTT+CGG 0.343013 4_3:-54855011 None:intergenic
ATCCTGCCTTCGACCTTAAT+AGG 0.358579 4_3:-54856724 None:intergenic
TCAAGGCATATATATTCAAT+TGG 0.366847 4_3:-54856932 None:intergenic
TGAATTTAGGGTTCGTGAAA+TGG 0.374821 4_3:+54855108 Msa0648370:exon
TCCAGCTTCATACAAATTAC+TGG 0.379807 4_3:-54857233 None:intergenic
TTATTGAATTTCGCTAGATT+GGG 0.381442 4_3:-54855021 None:intergenic
ATGCATTCTTAGTGTATGTT+TGG 0.393007 4_3:+54857357 Msa0648370:three_prime_UTR
TGTTCAGGATCACCACCATT+AGG 0.395716 4_3:+54856997 Msa0648370:CDS
CCTGCATCCATTTGGCGGTA+TGG 0.411757 4_3:-54855228 None:intergenic
GATCAATGAAATGAAGCAAA+TGG 0.437252 4_3:-54855049 None:intergenic
TTGTGGCCTACGTTATGTTC+AGG 0.438157 4_3:+54856982 Msa0648370:CDS
CAAGGGTACCTGCATCCATT+TGG 0.438292 4_3:-54855236 None:intergenic
GCTGAAGCTTCTCGTGGCAT+TGG 0.457206 4_3:-54855182 None:intergenic
TTGTAGACAGCATTTCCTAA+TGG 0.457797 4_3:-54857012 None:intergenic
GCCAGTAATTTGTATGAAGC+TGG 0.466821 4_3:+54857232 Msa0648370:three_prime_UTR
ATATTTGCAGACAGCTGGCT+TGG 0.471892 4_3:-54856960 None:intergenic
CCACAATATTTGCAGACAGC+TGG 0.487255 4_3:-54856965 None:intergenic
TCAGATACTGATCCCGCCCT+TGG 0.491224 4_3:+54856905 Msa0648370:intron
CAAGGCATATATATTCAATT+GGG 0.493277 4_3:-54856931 None:intergenic
ACTTCATTGATCAGCTCCAT+TGG 0.501732 4_3:-54856697 None:intergenic
CGCAAAACTTTCTTCATCGA+CGG 0.508352 4_3:+54855153 Msa0648370:CDS
TATATTCAATTGGGTGTCCA+AGG 0.513698 4_3:-54856922 None:intergenic
TCAGCAACCATACCGCCAAA+TGG 0.517445 4_3:+54855221 Msa0648370:CDS
TATTATCATGGACTTGGAGC+TGG 0.519081 4_3:-54857304 None:intergenic
TAGTAATATTATCATGGACT+TGG 0.523144 4_3:-54857310 None:intergenic
CGAGAATAGTAATATTATCA+TGG 0.524546 4_3:-54857316 None:intergenic
TCAATTGGGTGTCCAAGGGC+GGG 0.533281 4_3:-54856917 None:intergenic
AGGATAGTTGCTTGTGAAGG+AGG 0.556666 4_3:+54856742 Msa0648370:CDS
TGAATATATATGCCTTGACT+TGG 0.559389 4_3:+54856937 Msa0648370:CDS
TAGACAGCATTTCCTAATGG+TGG 0.561404 4_3:-54857009 None:intergenic
TTCAATTGGGTGTCCAAGGG+CGG 0.562046 4_3:-54856918 None:intergenic
ATTATAAAACACATGGGGTA+CGG 0.562534 4_3:+54854960 None:intergenic
ATGTTACCATCTGATACAGA+TGG 0.565602 4_3:+54857177 Msa0648370:three_prime_UTR
TGTTACCATCTGATACAGAT+GGG 0.570260 4_3:+54857178 Msa0648370:three_prime_UTR
GGGTACCTGCATCCATTTGG+CGG 0.571657 4_3:-54855233 None:intergenic
TATTGAATTTCGCTAGATTG+GGG 0.576542 4_3:-54855020 None:intergenic
CATTTCATTGATCTAAATCG+AGG 0.578590 4_3:+54855059 Msa0648370:five_prime_UTR
CACCTATTAAGGTCGAAGGC+AGG 0.585151 4_3:+54856722 Msa0648370:CDS
CCATACCGCCAAATGGATGC+AGG 0.587906 4_3:+54855228 Msa0648370:CDS
CAGCTGGCTTGGCCAAGTCA+AGG 0.593924 4_3:-54856949 None:intergenic
GGCAGGATAGTTGCTTGTGA+AGG 0.597267 4_3:+54856739 Msa0648370:CDS
CCAGCTGTCTGCAAATATTG+TGG 0.599405 4_3:+54856965 Msa0648370:CDS
TACAAGCAAGAAATCTCCAA+TGG 0.613035 4_3:+54856681 Msa0648370:CDS
GTGCCACCTATTAAGGTCGA+AGG 0.614174 4_3:+54856718 Msa0648370:CDS
TACAAATTACTGGCTCTGCA+TGG 0.619659 4_3:-54857223 None:intergenic
TGAATTTCGCTAGATTGGGG+AGG 0.623128 4_3:-54855017 None:intergenic
AAGACCCCATCTGTATCAGA+TGG 0.623268 4_3:-54857183 None:intergenic
ATATTCAATTGGGTGTCCAA+GGG 0.625308 4_3:-54856921 None:intergenic
GTGAGTATTATAAAACACAT+GGG 0.634877 4_3:+54854954 None:intergenic
TGCTGATTTGAGAGGTTACG+AGG 0.641542 4_3:-54855204 None:intergenic
AGTGAGTATTATAAAACACA+TGG 0.648328 4_3:+54854953 None:intergenic
TACGAGGCTGAAGCTTCTCG+TGG 0.652541 4_3:-54855188 None:intergenic
CTGCCTTCGACCTTAATAGG+TGG 0.653190 4_3:-54856721 None:intergenic
AGTAATTTGTATGAAGCTGG+AGG 0.661114 4_3:+54857235 Msa0648370:three_prime_UTR
GGTATGGTTGCTGATTTGAG+AGG 0.668761 4_3:-54855212 None:intergenic
GTTACCATCTGATACAGATG+GGG 0.693905 4_3:+54857179 Msa0648370:three_prime_UTR
TGAGTATTATAAAACACATG+GGG 0.726822 4_3:+54854955 None:intergenic
GGTGATCCTGAACATAACGT+AGG 0.735270 4_3:-54856988 None:intergenic
GATAGTAATCAAGATCCGTG+AGG 0.748285 4_3:+54854982 Msa0648370:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATAAAAATTCCGATT+AGG - chr4_3:54855385-54855404 None:intergenic 15.0%
!! AATATATAAAAATTCCGATT+AGG - chr4_3:54855385-54855404 None:intergenic 15.0%
!!! TCATTGAATTTTTTGAAATG+AGG + chr4_3:54855326-54855345 Msa0648370:intron 20.0%
!!! CATTGAATTTTTTGAAATGA+GGG + chr4_3:54855327-54855346 Msa0648370:intron 20.0%
!!! ATTGAATTTTTTGAAATGAG+GGG + chr4_3:54855328-54855347 Msa0648370:intron 20.0%
!! TTTATAATTCTCTTCCTAAT+CGG + chr4_3:54855368-54855387 Msa0648370:intron 20.0%
!! TGATTTAACTAATTTGGATT+TGG + chr4_3:54856864-54856883 Msa0648370:intron 20.0%
!!! ATTTGTTACATCATATGATT+TGG - chr4_3:54857109-54857128 None:intergenic 20.0%
!!! TCATTGAATTTTTTGAAATG+AGG + chr4_3:54855326-54855345 Msa0648370:intron 20.0%
!!! CATTGAATTTTTTGAAATGA+GGG + chr4_3:54855327-54855346 Msa0648370:intron 20.0%
!!! ATTGAATTTTTTGAAATGAG+GGG + chr4_3:54855328-54855347 Msa0648370:intron 20.0%
!! TTTATAATTCTCTTCCTAAT+CGG + chr4_3:54855368-54855387 Msa0648370:intron 20.0%
!! TGATTTAACTAATTTGGATT+TGG + chr4_3:54856864-54856883 Msa0648370:intron 20.0%
!!! ATTTGTTACATCATATGATT+TGG - chr4_3:54857109-54857128 None:intergenic 20.0%
! TTATTGAATTTCGCTAGATT+GGG - chr4_3:54855024-54855043 None:intergenic 25.0%
! TTTATTGAATTTCGCTAGAT+TGG - chr4_3:54855025-54855044 None:intergenic 25.0%
!!! TTGATTTGCGATTGAATTTA+GGG + chr4_3:54855096-54855115 Msa0648370:five_prime_UTR 25.0%
! ATTAAATTTAGGGATGATTG+TGG + chr4_3:54855409-54855428 Msa0648370:intron 25.0%
! GCATAGTAGTTTAATGAATT+GGG + chr4_3:54855545-54855564 Msa0648370:intron 25.0%
! CATAGTAGTTTAATGAATTG+GGG + chr4_3:54855546-54855565 Msa0648370:intron 25.0%
! AAAAATAAACCAATCCAAAC+AGG - chr4_3:54855572-54855591 None:intergenic 25.0%
! AGTTTATGTTTAAACAGCAT+AGG + chr4_3:54855611-54855630 Msa0648370:intron 25.0%
! GTTTATGTTTAAACAGCATA+GGG + chr4_3:54855612-54855631 Msa0648370:intron 25.0%
!! AAACTTTAAGAAACAAAGTG+AGG + chr4_3:54855924-54855943 Msa0648370:intron 25.0%
!! TTAGTGATGTTATGATGTTT+TGG + chr4_3:54856044-54856063 Msa0648370:intron 25.0%
!! TAGTGATGTTATGATGTTTT+GGG + chr4_3:54856045-54856064 Msa0648370:intron 25.0%
! AAAGTAGTGTAATCATTACT+TGG - chr4_3:54856180-54856199 None:intergenic 25.0%
! TAGCTAGCTAAATAAATGTT+TGG + chr4_3:54856291-54856310 Msa0648370:intron 25.0%
! AGCTAGCTAAATAAATGTTT+GGG + chr4_3:54856292-54856311 Msa0648370:intron 25.0%
!! TAAGTTGAAAAATGTACACA+AGG - chr4_3:54856427-54856446 None:intergenic 25.0%
!! TGAAAAATTGCTGGTATTTT+AGG - chr4_3:54856513-54856532 None:intergenic 25.0%
!! AAAATACCAGCAATTTTTCA+TGG + chr4_3:54856513-54856532 Msa0648370:intron 25.0%
!! ATGATTTAAAATTCCAGTAG+TGG - chr4_3:54856598-54856617 None:intergenic 25.0%
!! ACATTTGTTTCTTCTGTAAT+AGG + chr4_3:54856657-54856676 Msa0648370:intron 25.0%
!!! TCAAGTTTTGTTGATTATGT+AGG + chr4_3:54856840-54856859 Msa0648370:intron 25.0%
! GTAGGATGATTTAACTAATT+TGG + chr4_3:54856858-54856877 Msa0648370:intron 25.0%
! CAAGGCATATATATTCAATT+GGG - chr4_3:54856934-54856953 None:intergenic 25.0%
! TCAAGGCATATATATTCAAT+TGG - chr4_3:54856935-54856954 None:intergenic 25.0%
!! GAACATCATTAATGTGTTTT+TGG + chr4_3:54857067-54857086 Msa0648370:three_prime_UTR 25.0%
! TAGTAATATTATCATGGACT+TGG - chr4_3:54857313-54857332 None:intergenic 25.0%
! CGAGAATAGTAATATTATCA+TGG - chr4_3:54857319-54857338 None:intergenic 25.0%
! TTATTGAATTTCGCTAGATT+GGG - chr4_3:54855024-54855043 None:intergenic 25.0%
! TTTATTGAATTTCGCTAGAT+TGG - chr4_3:54855025-54855044 None:intergenic 25.0%
!!! TTGATTTGCGATTGAATTTA+GGG + chr4_3:54855096-54855115 Msa0648370:five_prime_UTR 25.0%
! ATTAAATTTAGGGATGATTG+TGG + chr4_3:54855409-54855428 Msa0648370:intron 25.0%
! GCATAGTAGTTTAATGAATT+GGG + chr4_3:54855545-54855564 Msa0648370:intron 25.0%
! CATAGTAGTTTAATGAATTG+GGG + chr4_3:54855546-54855565 Msa0648370:intron 25.0%
! AAAAATAAACCAATCCAAAC+AGG - chr4_3:54855572-54855591 None:intergenic 25.0%
! AGTTTATGTTTAAACAGCAT+AGG + chr4_3:54855611-54855630 Msa0648370:intron 25.0%
! GTTTATGTTTAAACAGCATA+GGG + chr4_3:54855612-54855631 Msa0648370:intron 25.0%
!! AAACTTTAAGAAACAAAGTG+AGG + chr4_3:54855924-54855943 Msa0648370:intron 25.0%
!! TTAGTGATGTTATGATGTTT+TGG + chr4_3:54856044-54856063 Msa0648370:intron 25.0%
!! TAGTGATGTTATGATGTTTT+GGG + chr4_3:54856045-54856064 Msa0648370:intron 25.0%
! AAAGTAGTGTAATCATTACT+TGG - chr4_3:54856180-54856199 None:intergenic 25.0%
! TAGCTAGCTAAATAAATGTT+TGG + chr4_3:54856291-54856310 Msa0648370:intron 25.0%
! AGCTAGCTAAATAAATGTTT+GGG + chr4_3:54856292-54856311 Msa0648370:intron 25.0%
!! TAAGTTGAAAAATGTACACA+AGG - chr4_3:54856427-54856446 None:intergenic 25.0%
!! TGAAAAATTGCTGGTATTTT+AGG - chr4_3:54856513-54856532 None:intergenic 25.0%
!! AAAATACCAGCAATTTTTCA+TGG + chr4_3:54856513-54856532 Msa0648370:intron 25.0%
!! ATGATTTAAAATTCCAGTAG+TGG - chr4_3:54856598-54856617 None:intergenic 25.0%
!! ACATTTGTTTCTTCTGTAAT+AGG + chr4_3:54856657-54856676 Msa0648370:intron 25.0%
!!! TCAAGTTTTGTTGATTATGT+AGG + chr4_3:54856840-54856859 Msa0648370:intron 25.0%
! GTAGGATGATTTAACTAATT+TGG + chr4_3:54856858-54856877 Msa0648370:intron 25.0%
! CAAGGCATATATATTCAATT+GGG - chr4_3:54856934-54856953 None:intergenic 25.0%
! TCAAGGCATATATATTCAAT+TGG - chr4_3:54856935-54856954 None:intergenic 25.0%
!! GAACATCATTAATGTGTTTT+TGG + chr4_3:54857067-54857086 Msa0648370:three_prime_UTR 25.0%
! TAGTAATATTATCATGGACT+TGG - chr4_3:54857313-54857332 None:intergenic 25.0%
! CGAGAATAGTAATATTATCA+TGG - chr4_3:54857319-54857338 None:intergenic 25.0%
TATTGAATTTCGCTAGATTG+GGG - chr4_3:54855023-54855042 None:intergenic 30.0%
GATCAATGAAATGAAGCAAA+TGG - chr4_3:54855052-54855071 None:intergenic 30.0%
CATTTCATTGATCTAAATCG+AGG + chr4_3:54855059-54855078 Msa0648370:five_prime_UTR 30.0%
!! GTTGATTTGCGATTGAATTT+AGG + chr4_3:54855095-54855114 Msa0648370:five_prime_UTR 30.0%
ATTGTTAAATCAAACGCATG+AGG - chr4_3:54855270-54855289 None:intergenic 30.0%
GTAAATCATTGTTTCGCATT+TGG + chr4_3:54855461-54855480 Msa0648370:intron 30.0%
!! TTTGGTTTGTTACACGTTAA+TGG + chr4_3:54855479-54855498 Msa0648370:intron 30.0%
ATCCTGAGATTATATGAGAA+AGG + chr4_3:54855502-54855521 Msa0648370:intron 30.0%
AACCTTTCTCATATAATCTC+AGG - chr4_3:54855507-54855526 None:intergenic 30.0%
GGCATAGTAGTTTAATGAAT+TGG + chr4_3:54855544-54855563 Msa0648370:intron 30.0%
ATTGTTTGAGCATAAGTGTA+TGG + chr4_3:54855795-54855814 Msa0648370:intron 30.0%
! TGGAAGAAATCTTCATTTTG+AGG + chr4_3:54855897-54855916 Msa0648370:intron 30.0%
!! AGAAATCTTCATTTTGAGGA+TGG + chr4_3:54855901-54855920 Msa0648370:intron 30.0%
TGGATATAACTATTCACTTG+TGG - chr4_3:54855970-54855989 None:intergenic 30.0%
TTTCTCCCTCATTTAAACAA+GGG + chr4_3:54856069-54856088 Msa0648370:intron 30.0%
CAAGAGAAAACTTCTACTTA+TGG - chr4_3:54856134-54856153 None:intergenic 30.0%
! CATAAGTAGAAGTTTTCTCT+TGG + chr4_3:54856132-54856151 Msa0648370:intron 30.0%
TTAAACAACACAAAACACAC+AGG - chr4_3:54856266-54856285 None:intergenic 30.0%
AATTGCACTCAAAATCACTT+TGG - chr4_3:54856328-54856347 None:intergenic 30.0%
TGAAGTGCAGTATTTATGTT+TGG + chr4_3:54856367-54856386 Msa0648370:intron 30.0%
TACTTAAGAATTATGTCTCC+AGG - chr4_3:54856489-54856508 None:intergenic 30.0%
! TTTTCTCCATGAAAAATTGC+TGG - chr4_3:54856522-54856541 None:intergenic 30.0%
! ATCTTTTTCTCACTTATGCA+AGG - chr4_3:54856806-54856825 None:intergenic 30.0%
TGAATATATATGCCTTGACT+TGG + chr4_3:54856937-54856956 Msa0648370:CDS 30.0%
ATGCATTCTTAGTGTATGTT+TGG + chr4_3:54857357-54857376 Msa0648370:three_prime_UTR 30.0%
TATTGAATTTCGCTAGATTG+GGG - chr4_3:54855023-54855042 None:intergenic 30.0%
GATCAATGAAATGAAGCAAA+TGG - chr4_3:54855052-54855071 None:intergenic 30.0%
CATTTCATTGATCTAAATCG+AGG + chr4_3:54855059-54855078 Msa0648370:five_prime_UTR 30.0%
!! GTTGATTTGCGATTGAATTT+AGG + chr4_3:54855095-54855114 Msa0648370:five_prime_UTR 30.0%
ATTGTTAAATCAAACGCATG+AGG - chr4_3:54855270-54855289 None:intergenic 30.0%
GTAAATCATTGTTTCGCATT+TGG + chr4_3:54855461-54855480 Msa0648370:intron 30.0%
!! TTTGGTTTGTTACACGTTAA+TGG + chr4_3:54855479-54855498 Msa0648370:intron 30.0%
ATCCTGAGATTATATGAGAA+AGG + chr4_3:54855502-54855521 Msa0648370:intron 30.0%
AACCTTTCTCATATAATCTC+AGG - chr4_3:54855507-54855526 None:intergenic 30.0%
GGCATAGTAGTTTAATGAAT+TGG + chr4_3:54855544-54855563 Msa0648370:intron 30.0%
ATTGTTTGAGCATAAGTGTA+TGG + chr4_3:54855795-54855814 Msa0648370:intron 30.0%
! TGGAAGAAATCTTCATTTTG+AGG + chr4_3:54855897-54855916 Msa0648370:intron 30.0%
!! AGAAATCTTCATTTTGAGGA+TGG + chr4_3:54855901-54855920 Msa0648370:intron 30.0%
TGGATATAACTATTCACTTG+TGG - chr4_3:54855970-54855989 None:intergenic 30.0%
TTTCTCCCTCATTTAAACAA+GGG + chr4_3:54856069-54856088 Msa0648370:intron 30.0%
CAAGAGAAAACTTCTACTTA+TGG - chr4_3:54856134-54856153 None:intergenic 30.0%
! CATAAGTAGAAGTTTTCTCT+TGG + chr4_3:54856132-54856151 Msa0648370:intron 30.0%
TTAAACAACACAAAACACAC+AGG - chr4_3:54856266-54856285 None:intergenic 30.0%
AATTGCACTCAAAATCACTT+TGG - chr4_3:54856328-54856347 None:intergenic 30.0%
TGAAGTGCAGTATTTATGTT+TGG + chr4_3:54856367-54856386 Msa0648370:intron 30.0%
TACTTAAGAATTATGTCTCC+AGG - chr4_3:54856489-54856508 None:intergenic 30.0%
! TTTTCTCCATGAAAAATTGC+TGG - chr4_3:54856522-54856541 None:intergenic 30.0%
! ATCTTTTTCTCACTTATGCA+AGG - chr4_3:54856806-54856825 None:intergenic 30.0%
TGAATATATATGCCTTGACT+TGG + chr4_3:54856937-54856956 Msa0648370:CDS 30.0%
ATGCATTCTTAGTGTATGTT+TGG + chr4_3:54857357-54857376 Msa0648370:three_prime_UTR 30.0%
! TGAATTTAGGGTTCGTGAAA+TGG + chr4_3:54855108-54855127 Msa0648370:exon 35.0%
!! AGAAAGGTTTTGATCCTTTG+TGG + chr4_3:54855518-54855537 Msa0648370:intron 35.0%
!! GAAAGGTTTTGATCCTTTGT+GGG + chr4_3:54855519-54855538 Msa0648370:intron 35.0%
!! AAAGGTTTTGATCCTTTGTG+GGG + chr4_3:54855520-54855539 Msa0648370:intron 35.0%
TTTGCATAAGCCAATCGAAA+TGG + chr4_3:54855687-54855706 Msa0648370:intron 35.0%
TTGCATAAGCCAATCGAAAT+GGG + chr4_3:54855688-54855707 Msa0648370:intron 35.0%
AAACAAGCTTAACCTTCCAA+GGG - chr4_3:54855714-54855733 None:intergenic 35.0%
! TTGGAAGGTTAAGCTTGTTT+GGG + chr4_3:54855714-54855733 Msa0648370:intron 35.0%
! GCTTTTCTAGGTTACTTATG+TGG + chr4_3:54855877-54855896 Msa0648370:intron 35.0%
AGTTATATCCATCACTCTAG+CGG + chr4_3:54855979-54855998 Msa0648370:intron 35.0%
CTTTCTCCCTCATTTAAACA+AGG + chr4_3:54856068-54856087 Msa0648370:intron 35.0%
! CAAGACCCTTGTTTAAATGA+GGG - chr4_3:54856077-54856096 None:intergenic 35.0%
!! TTGGCTTGTAGTGATAAAAG+TGG - chr4_3:54856459-54856478 None:intergenic 35.0%
TACAAGCAAGAAATCTCCAA+TGG + chr4_3:54856681-54856700 Msa0648370:CDS 35.0%
ATATTCAATTGGGTGTCCAA+GGG - chr4_3:54856924-54856943 None:intergenic 35.0%
TATATTCAATTGGGTGTCCA+AGG - chr4_3:54856925-54856944 None:intergenic 35.0%
TTGTAGACAGCATTTCCTAA+TGG - chr4_3:54857015-54857034 None:intergenic 35.0%
ATGTTACCATCTGATACAGA+TGG + chr4_3:54857177-54857196 Msa0648370:three_prime_UTR 35.0%
TGTTACCATCTGATACAGAT+GGG + chr4_3:54857178-54857197 Msa0648370:three_prime_UTR 35.0%
TCCAGCTTCATACAAATTAC+TGG - chr4_3:54857236-54857255 None:intergenic 35.0%
! AGTAATTTGTATGAAGCTGG+AGG + chr4_3:54857235-54857254 Msa0648370:three_prime_UTR 35.0%
! TGAATTTAGGGTTCGTGAAA+TGG + chr4_3:54855108-54855127 Msa0648370:exon 35.0%
!! AGAAAGGTTTTGATCCTTTG+TGG + chr4_3:54855518-54855537 Msa0648370:intron 35.0%
!! GAAAGGTTTTGATCCTTTGT+GGG + chr4_3:54855519-54855538 Msa0648370:intron 35.0%
!! AAAGGTTTTGATCCTTTGTG+GGG + chr4_3:54855520-54855539 Msa0648370:intron 35.0%
TTTGCATAAGCCAATCGAAA+TGG + chr4_3:54855687-54855706 Msa0648370:intron 35.0%
TTGCATAAGCCAATCGAAAT+GGG + chr4_3:54855688-54855707 Msa0648370:intron 35.0%
AAACAAGCTTAACCTTCCAA+GGG - chr4_3:54855714-54855733 None:intergenic 35.0%
! TTGGAAGGTTAAGCTTGTTT+GGG + chr4_3:54855714-54855733 Msa0648370:intron 35.0%
! GCTTTTCTAGGTTACTTATG+TGG + chr4_3:54855877-54855896 Msa0648370:intron 35.0%
AGTTATATCCATCACTCTAG+CGG + chr4_3:54855979-54855998 Msa0648370:intron 35.0%
CTTTCTCCCTCATTTAAACA+AGG + chr4_3:54856068-54856087 Msa0648370:intron 35.0%
! CAAGACCCTTGTTTAAATGA+GGG - chr4_3:54856077-54856096 None:intergenic 35.0%
!! TTGGCTTGTAGTGATAAAAG+TGG - chr4_3:54856459-54856478 None:intergenic 35.0%
TACAAGCAAGAAATCTCCAA+TGG + chr4_3:54856681-54856700 Msa0648370:CDS 35.0%
ATATTCAATTGGGTGTCCAA+GGG - chr4_3:54856924-54856943 None:intergenic 35.0%
TATATTCAATTGGGTGTCCA+AGG - chr4_3:54856925-54856944 None:intergenic 35.0%
TTGTAGACAGCATTTCCTAA+TGG - chr4_3:54857015-54857034 None:intergenic 35.0%
ATGTTACCATCTGATACAGA+TGG + chr4_3:54857177-54857196 Msa0648370:three_prime_UTR 35.0%
TGTTACCATCTGATACAGAT+GGG + chr4_3:54857178-54857197 Msa0648370:three_prime_UTR 35.0%
TCCAGCTTCATACAAATTAC+TGG - chr4_3:54857236-54857255 None:intergenic 35.0%
! AGTAATTTGTATGAAGCTGG+AGG + chr4_3:54857235-54857254 Msa0648370:three_prime_UTR 35.0%
GATAGTAATCAAGATCCGTG+AGG + chr4_3:54854982-54855001 Msa0648370:five_prime_UTR 40.0%
! TCGATGAAGAAAGTTTTGCG+AGG - chr4_3:54855153-54855172 None:intergenic 40.0%
CGCAAAACTTTCTTCATCGA+CGG + chr4_3:54855153-54855172 Msa0648370:CDS 40.0%
GAAATGAGGGGAAAGTAATG+TGG + chr4_3:54855340-54855359 Msa0648370:intron 40.0%
GGATGATTGTGGTGAAATGA+GGG + chr4_3:54855420-54855439 Msa0648370:intron 40.0%
TTAATGAATTGGGGCCTGTT+TGG + chr4_3:54855555-54855574 Msa0648370:intron 40.0%
CAAACAAGCTTAACCTTCCA+AGG - chr4_3:54855715-54855734 None:intergenic 40.0%
! CTTGGAAGGTTAAGCTTGTT+TGG + chr4_3:54855713-54855732 Msa0648370:intron 40.0%
! TGGAAGGTTAAGCTTGTTTG+GGG + chr4_3:54855715-54855734 Msa0648370:intron 40.0%
GTGAGGTGTAAAGTTTGAAC+AGG + chr4_3:54855941-54855960 Msa0648370:intron 40.0%
! TTCAGGGATGCTTTTCTCTT+TGG + chr4_3:54856006-54856025 Msa0648370:intron 40.0%
! GCAAGACCCTTGTTTAAATG+AGG - chr4_3:54856078-54856097 None:intergenic 40.0%
! TATGTCTCCAGGTCTCATTT+TGG - chr4_3:54856478-54856497 None:intergenic 40.0%
ACTTCATTGATCAGCTCCAT+TGG - chr4_3:54856700-54856719 None:intergenic 40.0%
! CAATGAAGTGCCACCTATTA+AGG + chr4_3:54856711-54856730 Msa0648370:CDS 40.0%
GAAAAAGATGAAGACCTGAC+AGG + chr4_3:54856817-54856836 Msa0648370:intron 40.0%
TCAACAAAACTTGACCTGTC+AGG - chr4_3:54856834-54856853 None:intergenic 40.0%
TAGACAGCATTTCCTAATGG+TGG - chr4_3:54857012-54857031 None:intergenic 40.0%
GTTACCATCTGATACAGATG+GGG + chr4_3:54857179-54857198 Msa0648370:three_prime_UTR 40.0%
!! TACAAATTACTGGCTCTGCA+TGG - chr4_3:54857226-54857245 None:intergenic 40.0%
! GCCAGTAATTTGTATGAAGC+TGG + chr4_3:54857232-54857251 Msa0648370:three_prime_UTR 40.0%
TATTATCATGGACTTGGAGC+TGG - chr4_3:54857307-54857326 None:intergenic 40.0%
GATAGTAATCAAGATCCGTG+AGG + chr4_3:54854982-54855001 Msa0648370:five_prime_UTR 40.0%
! TCGATGAAGAAAGTTTTGCG+AGG - chr4_3:54855153-54855172 None:intergenic 40.0%
CGCAAAACTTTCTTCATCGA+CGG + chr4_3:54855153-54855172 Msa0648370:CDS 40.0%
GAAATGAGGGGAAAGTAATG+TGG + chr4_3:54855340-54855359 Msa0648370:intron 40.0%
GGATGATTGTGGTGAAATGA+GGG + chr4_3:54855420-54855439 Msa0648370:intron 40.0%
TTAATGAATTGGGGCCTGTT+TGG + chr4_3:54855555-54855574 Msa0648370:intron 40.0%
CAAACAAGCTTAACCTTCCA+AGG - chr4_3:54855715-54855734 None:intergenic 40.0%
! CTTGGAAGGTTAAGCTTGTT+TGG + chr4_3:54855713-54855732 Msa0648370:intron 40.0%
! TGGAAGGTTAAGCTTGTTTG+GGG + chr4_3:54855715-54855734 Msa0648370:intron 40.0%
GTGAGGTGTAAAGTTTGAAC+AGG + chr4_3:54855941-54855960 Msa0648370:intron 40.0%
! TTCAGGGATGCTTTTCTCTT+TGG + chr4_3:54856006-54856025 Msa0648370:intron 40.0%
! GCAAGACCCTTGTTTAAATG+AGG - chr4_3:54856078-54856097 None:intergenic 40.0%
! TATGTCTCCAGGTCTCATTT+TGG - chr4_3:54856478-54856497 None:intergenic 40.0%
ACTTCATTGATCAGCTCCAT+TGG - chr4_3:54856700-54856719 None:intergenic 40.0%
! CAATGAAGTGCCACCTATTA+AGG + chr4_3:54856711-54856730 Msa0648370:CDS 40.0%
GAAAAAGATGAAGACCTGAC+AGG + chr4_3:54856817-54856836 Msa0648370:intron 40.0%
TCAACAAAACTTGACCTGTC+AGG - chr4_3:54856834-54856853 None:intergenic 40.0%
TAGACAGCATTTCCTAATGG+TGG - chr4_3:54857012-54857031 None:intergenic 40.0%
GTTACCATCTGATACAGATG+GGG + chr4_3:54857179-54857198 Msa0648370:three_prime_UTR 40.0%
!! TACAAATTACTGGCTCTGCA+TGG - chr4_3:54857226-54857245 None:intergenic 40.0%
! GCCAGTAATTTGTATGAAGC+TGG + chr4_3:54857232-54857251 Msa0648370:three_prime_UTR 40.0%
TATTATCATGGACTTGGAGC+TGG - chr4_3:54857307-54857326 None:intergenic 40.0%
! AGGTTTCGGTCTTTTCCTCA+CGG - chr4_3:54855000-54855019 None:intergenic 45.0%
TGAATTTCGCTAGATTGGGG+AGG - chr4_3:54855020-54855039 None:intergenic 45.0%
!! TGCTGATTTGAGAGGTTACG+AGG - chr4_3:54855207-54855226 None:intergenic 45.0%
!! GGTATGGTTGCTGATTTGAG+AGG - chr4_3:54855215-54855234 None:intergenic 45.0%
CGCATGAGGTGAATTCACAA+GGG - chr4_3:54855256-54855275 None:intergenic 45.0%
ACGCATGAGGTGAATTCACA+AGG - chr4_3:54855257-54855276 None:intergenic 45.0%
GAGGGGAAAGTAATGTGGTT+AGG + chr4_3:54855345-54855364 Msa0648370:intron 45.0%
GGGATGATTGTGGTGAAATG+AGG + chr4_3:54855419-54855438 Msa0648370:intron 45.0%
TGAGCATAAGTGTATGGACC+AGG + chr4_3:54855801-54855820 Msa0648370:intron 45.0%
GAGCATAAGTGTATGGACCA+GGG + chr4_3:54855802-54855821 Msa0648370:intron 45.0%
AGCATAAGTGTATGGACCAG+GGG + chr4_3:54855803-54855822 Msa0648370:intron 45.0%
ACATTCTCTAATCTCTCCCC+TGG - chr4_3:54855822-54855841 None:intergenic 45.0%
AACCTAGAAAAGCTCACACG+CGG - chr4_3:54855870-54855889 None:intergenic 45.0%
!! TGCGCTAAGTGCATTGGTTA+AGG + chr4_3:54856105-54856124 Msa0648370:intron 45.0%
ATTGCTTAACCAATGCCCCT+AGG + chr4_3:54856223-54856242 Msa0648370:intron 45.0%
TTGCTTAACCAATGCCCCTA+GGG + chr4_3:54856224-54856243 Msa0648370:intron 45.0%
CTACAAGCCAAAATGAGACC+TGG + chr4_3:54856468-54856487 Msa0648370:intron 45.0%
ATGTTTGGATGCAGCGCAAT+CGG - chr4_3:54856565-54856584 None:intergenic 45.0%
AGTGGAGCTAAGTGCATGTT+TGG - chr4_3:54856580-54856599 None:intergenic 45.0%
ATCCTGCCTTCGACCTTAAT+AGG - chr4_3:54856727-54856746 None:intergenic 45.0%
AGGATAGTTGCTTGTGAAGG+AGG + chr4_3:54856742-54856761 Msa0648370:CDS 45.0%
ATATTTGCAGACAGCTGGCT+TGG - chr4_3:54856963-54856982 None:intergenic 45.0%
CCACAATATTTGCAGACAGC+TGG - chr4_3:54856968-54856987 None:intergenic 45.0%
CCAGCTGTCTGCAAATATTG+TGG + chr4_3:54856965-54856984 Msa0648370:CDS 45.0%
TTGTGGCCTACGTTATGTTC+AGG + chr4_3:54856982-54857001 Msa0648370:CDS 45.0%
GGTGATCCTGAACATAACGT+AGG - chr4_3:54856991-54857010 None:intergenic 45.0%
TGTTCAGGATCACCACCATT+AGG + chr4_3:54856997-54857016 Msa0648370:CDS 45.0%
AAGACCCCATCTGTATCAGA+TGG - chr4_3:54857186-54857205 None:intergenic 45.0%
! AGGTTTCGGTCTTTTCCTCA+CGG - chr4_3:54855000-54855019 None:intergenic 45.0%
TGAATTTCGCTAGATTGGGG+AGG - chr4_3:54855020-54855039 None:intergenic 45.0%
!! TGCTGATTTGAGAGGTTACG+AGG - chr4_3:54855207-54855226 None:intergenic 45.0%
!! GGTATGGTTGCTGATTTGAG+AGG - chr4_3:54855215-54855234 None:intergenic 45.0%
CGCATGAGGTGAATTCACAA+GGG - chr4_3:54855256-54855275 None:intergenic 45.0%
ACGCATGAGGTGAATTCACA+AGG - chr4_3:54855257-54855276 None:intergenic 45.0%
GAGGGGAAAGTAATGTGGTT+AGG + chr4_3:54855345-54855364 Msa0648370:intron 45.0%
GGGATGATTGTGGTGAAATG+AGG + chr4_3:54855419-54855438 Msa0648370:intron 45.0%
TGAGCATAAGTGTATGGACC+AGG + chr4_3:54855801-54855820 Msa0648370:intron 45.0%
GAGCATAAGTGTATGGACCA+GGG + chr4_3:54855802-54855821 Msa0648370:intron 45.0%
AGCATAAGTGTATGGACCAG+GGG + chr4_3:54855803-54855822 Msa0648370:intron 45.0%
ACATTCTCTAATCTCTCCCC+TGG - chr4_3:54855822-54855841 None:intergenic 45.0%
AACCTAGAAAAGCTCACACG+CGG - chr4_3:54855870-54855889 None:intergenic 45.0%
!! TGCGCTAAGTGCATTGGTTA+AGG + chr4_3:54856105-54856124 Msa0648370:intron 45.0%
ATTGCTTAACCAATGCCCCT+AGG + chr4_3:54856223-54856242 Msa0648370:intron 45.0%
TTGCTTAACCAATGCCCCTA+GGG + chr4_3:54856224-54856243 Msa0648370:intron 45.0%
CTACAAGCCAAAATGAGACC+TGG + chr4_3:54856468-54856487 Msa0648370:intron 45.0%
ATGTTTGGATGCAGCGCAAT+CGG - chr4_3:54856565-54856584 None:intergenic 45.0%
AGTGGAGCTAAGTGCATGTT+TGG - chr4_3:54856580-54856599 None:intergenic 45.0%
ATCCTGCCTTCGACCTTAAT+AGG - chr4_3:54856727-54856746 None:intergenic 45.0%
AGGATAGTTGCTTGTGAAGG+AGG + chr4_3:54856742-54856761 Msa0648370:CDS 45.0%
ATATTTGCAGACAGCTGGCT+TGG - chr4_3:54856963-54856982 None:intergenic 45.0%
CCACAATATTTGCAGACAGC+TGG - chr4_3:54856968-54856987 None:intergenic 45.0%
CCAGCTGTCTGCAAATATTG+TGG + chr4_3:54856965-54856984 Msa0648370:CDS 45.0%
TTGTGGCCTACGTTATGTTC+AGG + chr4_3:54856982-54857001 Msa0648370:CDS 45.0%
GGTGATCCTGAACATAACGT+AGG - chr4_3:54856991-54857010 None:intergenic 45.0%
TGTTCAGGATCACCACCATT+AGG + chr4_3:54856997-54857016 Msa0648370:CDS 45.0%
AAGACCCCATCTGTATCAGA+TGG - chr4_3:54857186-54857205 None:intergenic 45.0%
!!! ATATATTATTGATTAAATTT+AGG + chr4_3:54855398-54855417 Msa0648370:intron 5.0%
!!! TATATTATTGATTAAATTTA+GGG + chr4_3:54855399-54855418 Msa0648370:intron 5.0%
!!! ATATATTATTGATTAAATTT+AGG + chr4_3:54855398-54855417 Msa0648370:intron 5.0%
!!! TATATTATTGATTAAATTTA+GGG + chr4_3:54855399-54855418 Msa0648370:intron 5.0%
TCGCTAGATTGGGGAGGTTT+CGG - chr4_3:54855014-54855033 None:intergenic 50.0%
TCAGCAACCATACCGCCAAA+TGG + chr4_3:54855221-54855240 Msa0648370:CDS 50.0%
!! CAAGGGTACCTGCATCCATT+TGG - chr4_3:54855239-54855258 None:intergenic 50.0%
!! GGTTTTGATCCTTTGTGGGG+TGG + chr4_3:54855523-54855542 Msa0648370:intron 50.0%
ACTACTATGCCACCCCACAA+AGG - chr4_3:54855535-54855554 None:intergenic 50.0%
GAATTGGGGCCTGTTTGGAT+TGG + chr4_3:54855560-54855579 Msa0648370:intron 50.0%
TTCCAAGGGCCCATTTCGAT+TGG - chr4_3:54855700-54855719 None:intergenic 50.0%
AATCGAAATGGGCCCTTGGA+AGG + chr4_3:54855699-54855718 Msa0648370:intron 50.0%
! TGAAGCATCCGCTAGAGTGA+TGG - chr4_3:54855990-54856009 None:intergenic 50.0%
! ATCACTCTAGCGGATGCTTC+AGG + chr4_3:54855989-54856008 Msa0648370:intron 50.0%
! TCACTCTAGCGGATGCTTCA+GGG + chr4_3:54855990-54856009 Msa0648370:intron 50.0%
AACCAGTGCGCTAAGTGCAT+TGG + chr4_3:54856099-54856118 Msa0648370:intron 50.0%
AACCAATGCACTTAGCGCAC+TGG - chr4_3:54856104-54856123 None:intergenic 50.0%
AATGCTAACCAGTGCCCTAG+GGG - chr4_3:54856241-54856260 None:intergenic 50.0%
GAATGCTAACCAGTGCCCTA+GGG - chr4_3:54856242-54856261 None:intergenic 50.0%
AGAATGCTAACCAGTGCCCT+AGG - chr4_3:54856243-54856262 None:intergenic 50.0%
CATGCACTTAGCTCCACTAC+TGG + chr4_3:54856582-54856601 Msa0648370:intron 50.0%
GTGCCACCTATTAAGGTCGA+AGG + chr4_3:54856718-54856737 Msa0648370:CDS 50.0%
CTGCCTTCGACCTTAATAGG+TGG - chr4_3:54856724-54856743 None:intergenic 50.0%
CACCTATTAAGGTCGAAGGC+AGG + chr4_3:54856722-54856741 Msa0648370:CDS 50.0%
GGCAGGATAGTTGCTTGTGA+AGG + chr4_3:54856739-54856758 Msa0648370:CDS 50.0%
TTCAATTGGGTGTCCAAGGG+CGG - chr4_3:54856921-54856940 None:intergenic 50.0%
TCGCTAGATTGGGGAGGTTT+CGG - chr4_3:54855014-54855033 None:intergenic 50.0%
TCAGCAACCATACCGCCAAA+TGG + chr4_3:54855221-54855240 Msa0648370:CDS 50.0%
!! CAAGGGTACCTGCATCCATT+TGG - chr4_3:54855239-54855258 None:intergenic 50.0%
!! GGTTTTGATCCTTTGTGGGG+TGG + chr4_3:54855523-54855542 Msa0648370:intron 50.0%
ACTACTATGCCACCCCACAA+AGG - chr4_3:54855535-54855554 None:intergenic 50.0%
GAATTGGGGCCTGTTTGGAT+TGG + chr4_3:54855560-54855579 Msa0648370:intron 50.0%
TTCCAAGGGCCCATTTCGAT+TGG - chr4_3:54855700-54855719 None:intergenic 50.0%
AATCGAAATGGGCCCTTGGA+AGG + chr4_3:54855699-54855718 Msa0648370:intron 50.0%
! TGAAGCATCCGCTAGAGTGA+TGG - chr4_3:54855990-54856009 None:intergenic 50.0%
! ATCACTCTAGCGGATGCTTC+AGG + chr4_3:54855989-54856008 Msa0648370:intron 50.0%
! TCACTCTAGCGGATGCTTCA+GGG + chr4_3:54855990-54856009 Msa0648370:intron 50.0%
AACCAGTGCGCTAAGTGCAT+TGG + chr4_3:54856099-54856118 Msa0648370:intron 50.0%
AACCAATGCACTTAGCGCAC+TGG - chr4_3:54856104-54856123 None:intergenic 50.0%
AATGCTAACCAGTGCCCTAG+GGG - chr4_3:54856241-54856260 None:intergenic 50.0%
GAATGCTAACCAGTGCCCTA+GGG - chr4_3:54856242-54856261 None:intergenic 50.0%
AGAATGCTAACCAGTGCCCT+AGG - chr4_3:54856243-54856262 None:intergenic 50.0%
CATGCACTTAGCTCCACTAC+TGG + chr4_3:54856582-54856601 Msa0648370:intron 50.0%
GTGCCACCTATTAAGGTCGA+AGG + chr4_3:54856718-54856737 Msa0648370:CDS 50.0%
CTGCCTTCGACCTTAATAGG+TGG - chr4_3:54856724-54856743 None:intergenic 50.0%
CACCTATTAAGGTCGAAGGC+AGG + chr4_3:54856722-54856741 Msa0648370:CDS 50.0%
GGCAGGATAGTTGCTTGTGA+AGG + chr4_3:54856739-54856758 Msa0648370:CDS 50.0%
TTCAATTGGGTGTCCAAGGG+CGG - chr4_3:54856921-54856940 None:intergenic 50.0%
GCTGAAGCTTCTCGTGGCAT+TGG - chr4_3:54855185-54855204 None:intergenic 55.0%
TACGAGGCTGAAGCTTCTCG+TGG - chr4_3:54855191-54855210 None:intergenic 55.0%
CCTGCATCCATTTGGCGGTA+TGG - chr4_3:54855231-54855250 None:intergenic 55.0%
CCATACCGCCAAATGGATGC+AGG + chr4_3:54855228-54855247 Msa0648370:CDS 55.0%
GGGTACCTGCATCCATTTGG+CGG - chr4_3:54855236-54855255 None:intergenic 55.0%
AGCCAATCGAAATGGGCCCT+TGG + chr4_3:54855695-54855714 Msa0648370:intron 55.0%
! TGCCGCGTGTGAGCTTTTCT+AGG + chr4_3:54855865-54855884 Msa0648370:intron 55.0%
TCAGATACTGATCCCGCCCT+TGG + chr4_3:54856905-54856924 Msa0648370:intron 55.0%
TCAATTGGGTGTCCAAGGGC+GGG - chr4_3:54856920-54856939 None:intergenic 55.0%
GCTGAAGCTTCTCGTGGCAT+TGG - chr4_3:54855185-54855204 None:intergenic 55.0%
TACGAGGCTGAAGCTTCTCG+TGG - chr4_3:54855191-54855210 None:intergenic 55.0%
CCTGCATCCATTTGGCGGTA+TGG - chr4_3:54855231-54855250 None:intergenic 55.0%
CCATACCGCCAAATGGATGC+AGG + chr4_3:54855228-54855247 Msa0648370:CDS 55.0%
GGGTACCTGCATCCATTTGG+CGG - chr4_3:54855236-54855255 None:intergenic 55.0%
AGCCAATCGAAATGGGCCCT+TGG + chr4_3:54855695-54855714 Msa0648370:intron 55.0%
! TGCCGCGTGTGAGCTTTTCT+AGG + chr4_3:54855865-54855884 Msa0648370:intron 55.0%
TCAGATACTGATCCCGCCCT+TGG + chr4_3:54856905-54856924 Msa0648370:intron 55.0%
TCAATTGGGTGTCCAAGGGC+GGG - chr4_3:54856920-54856939 None:intergenic 55.0%
AACCAATGCCCCTAGGGCAC+TGG + chr4_3:54856230-54856249 Msa0648370:intron 60.0%
! AACCAGTGCCCTAGGGGCAT+TGG - chr4_3:54856235-54856254 None:intergenic 60.0%
!! CAGCTGGCTTGGCCAAGTCA+AGG - chr4_3:54856952-54856971 None:intergenic 60.0%
AACCAATGCCCCTAGGGCAC+TGG + chr4_3:54856230-54856249 Msa0648370:intron 60.0%
! AACCAGTGCCCTAGGGGCAT+TGG - chr4_3:54856235-54856254 None:intergenic 60.0%
!! CAGCTGGCTTGGCCAAGTCA+AGG - chr4_3:54856952-54856971 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 54854966 54857385 54854966 ID=Msa0648370;Name=Msa0648370
chr4_3 mRNA 54854966 54857385 54854966 ID=Msa0648370-mRNA-1;Parent=Msa0648370;Name=Msa0648370-mRNA-1;_AED=0.00;_eAED=0.00;_QI=161|1|1|1|1|1|3|367|105
chr4_3 exon 54854966 54855249 54854966 ID=Msa0648370-mRNA-1:exon:13885;Parent=Msa0648370-mRNA-1
chr4_3 exon 54856679 54856763 54856679 ID=Msa0648370-mRNA-1:exon:13886;Parent=Msa0648370-mRNA-1
chr4_3 exon 54856909 54857385 54856909 ID=Msa0648370-mRNA-1:exon:13887;Parent=Msa0648370-mRNA-1
chr4_3 five_prime_UTR 54854966 54855126 54854966 ID=Msa0648370-mRNA-1:five_prime_utr;Parent=Msa0648370-mRNA-1
chr4_3 CDS 54855127 54855249 54855127 ID=Msa0648370-mRNA-1:cds;Parent=Msa0648370-mRNA-1
chr4_3 CDS 54856679 54856763 54856679 ID=Msa0648370-mRNA-1:cds;Parent=Msa0648370-mRNA-1
chr4_3 CDS 54856909 54857018 54856909 ID=Msa0648370-mRNA-1:cds;Parent=Msa0648370-mRNA-1
chr4_3 three_prime_UTR 54857019 54857385 54857019 ID=Msa0648370-mRNA-1:three_prime_utr;Parent=Msa0648370-mRNA-1
Gene Sequence

>Msa0648370

ATGGCATCGAGCATTCTGAAAAACCTCGCAAAACTTTCTTCATCGACGGCGACGACCAATGCCACGAGAAGCTTCAGCCTCGTAACCTCTCAAATCAGCAACCATACCGCCAAATGGATGCAGGATACAAGCAAGAAATCTCCAATGGAGCTGATCAATGAAGTGCCACCTATTAAGGTCGAAGGCAGGATAGTTGCTTGTGAAGGAGATACTGATCCCGCCCTTGGACACCCAATTGAATATATATGCCTTGACTTGGCCAAGCCAGCTGTCTGCAAATATTGTGGCCTACGTTATGTTCAGGATCACCACCATTAG
Protein sequence

>Msa0648370

MASSILKNLAKLSSSTATTNATRSFSLVTSQISNHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDTDPALGHPIEYICLDLAKPAVCKYCGLRYVQDHHH*